mRNA_H-elongata_contig135485.2509.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: D7FP53_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP53_ECTSI) HSP 1 Score: 212 bits (539), Expect = 2.020e-61 Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATA 342
VNRNKFDA+ICVGTCGVYRR ALAPFGGTAAI YSEDVHTGFNC +LGYKVKY+PQVMAMGTCP EPRA FMQ YRWCMGSTTLL N EFW+S LT +QK+CYLSGM YY+ATA
Sbjct: 955 VNRNKFDASICVGTCGVYRREALAPFGGTAAIGYSEDVHTGFNCIQLGYKVKYVPQVMAMGTCPDEPRAFFMQQYRWCMGSTTLLSNREFWQSTLTRKQKLCYLSGMFYYSATA 1068
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: A0A6H5KYP8_9PHAE (GT2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP8_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.450e-54 Identity = 96/154 (62.34%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKV---------------------------------------KYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
VNR+KFDA+ICVGTCGVYRR ALAPFGGTAAI YSEDVHTGFNC +LGYKV KY+PQVMAMGTCP EPRA FMQ YRWCMGSTTLL N EFW+S LT +QK+CYLSGM YY+ATAM
Sbjct: 891 VNRDKFDASICVGTCGVYRREALAPFGGTAAIGYSEDVHTGFNCIQLGYKVRDAWTCVSGCTLTGTFARATACSGISFCHSLSFYSMYQVKYVPQVMAMGTCPDEPRAFFMQQYRWCMGSTTLLSNREFWQSTLTRKQKLCYLSGMFYYSATAM 1044
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: Q98523_PBCV1 (Glyco_trans_2-like domain-containing protein n=4 Tax=Chlorovirus TaxID=181083 RepID=Q98523_PBCV1) HSP 1 Score: 157 bits (396), Expect = 2.850e-43 Identity = 69/114 (60.53%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATA 342
V+R + AA+CVGTC VYRR +L PFGGTA I +SEDVHTGF+ G+K++Y+P +A G CP+E ++ F Q YRW +GSTTL N EFW+SNLT RQKIC+LSGMLY+ TA
Sbjct: 254 VSRETYGAAVCVGTCAVYRRESLVPFGGTAEIGFSEDVHTGFSVVNDGWKLRYLPLNLAKGVCPYELKSFFSQQYRWALGSTTLCFNPEFWKSNLTFRQKICFLSGMLYFQTTA 367
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: A0A814Q2D6_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814Q2D6_9BILA) HSP 1 Score: 150 bits (379), Expect = 9.650e-43 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
VNRN+F ++ICVGT +YRR AL PFGGT I +SED+HTGFN G+ VKY+P ++MG CP F Q YRW GST+L N FW+SNLTV QKICYLSGM YY+ATA+
Sbjct: 146 VNRNRFHSSICVGTSAIYRRKALIPFGGTYEIEHSEDLHTGFNATNHGWLVKYLPLNLSMGMCPDNLTTFFTQQYRWASGSTSLCLNKIFWKSNLTVIQKICYLSGMFYYSATAL 260
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: M3A7Q6_PSEFD (Glycosyltransferase family 2 protein (Fragment) n=1 Tax=Pseudocercospora fijiensis (strain CIRAD86) TaxID=383855 RepID=M3A7Q6_PSEFD) HSP 1 Score: 155 bits (391), Expect = 1.540e-42 Identity = 72/115 (62.61%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
VNRN+F A+ICVG+ VYRR+AL GGTA I +SEDVHTGF G+KV+Y+P +A G CP PRA F Q RWCMGSTTLL N +FWRS LT QKICYLSGM+YY+A ++
Sbjct: 254 VNRNRFGASICVGSNAVYRRAALEEVGGTAEIGFSEDVHTGFYAVDRGWKVRYLPLCLACGICPDTPRAFFSQQMRWCMGSTTLLTNLDFWRSGLTPIQKICYLSGMMYYSAISL 368
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: A0A6A6F490_9PEZI (Glycosyltransferase family 2 protein n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6F490_9PEZI) HSP 1 Score: 154 bits (388), Expect = 1.950e-42 Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
+NRN+F A+ICVG+ VYRR+AL GGTA I +SEDVHTGF G+KV+Y+P +A G CP PRA F Q RWCMGSTTLL N +FWRS L+ QKICYLSGM+YY+A ++
Sbjct: 204 INRNRFGASICVGSNAVYRRAALEEVGGTAEIGFSEDVHTGFYAVNRGWKVRYLPLCLACGICPDTPRAFFSQQMRWCMGSTTLLTNMDFWRSKLSPIQKICYLSGMMYYSAISL 318
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: A7ITR6_PBCVM (Uncharacterized protein M186R n=9 Tax=Chlorovirus TaxID=181083 RepID=A7ITR6_PBCVM) HSP 1 Score: 154 bits (389), Expect = 3.090e-42 Identity = 67/114 (58.77%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATA 342
V+R F AA+CVGTC +YRR AL PFGGTA I +SEDVHTGF+ G+K+KY+P +A G CP+E ++ F Q YRW +GSTTL N FW+S L++RQK+C+LSGMLY+ TA
Sbjct: 258 VSRESFGAAVCVGTCAMYRREALVPFGGTAEIGFSEDVHTGFSVVDAGWKLKYVPLNLAKGVCPYELKSFFSQQYRWALGSTTLCFNPHFWKSALSLRQKVCFLSGMLYFQTTA 371
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: K2RGT2_MACPH (Glycosyl transferase family 2 n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2RGT2_MACPH) HSP 1 Score: 155 bits (391), Expect = 7.200e-42 Identity = 71/115 (61.74%), Postives = 85/115 (73.91%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
VNRN++ A+ICVG+ VYRR ALA GGTA I YSEDVHTGF G+ V+Y+P +A G CP PRA F Q RWCMGSTTLL N EFWRS L+ QK+CYLSGM+YY+A ++
Sbjct: 398 VNRNRWGASICVGSNAVYRREALAEVGGTAEIGYSEDVHTGFGAVDRGWTVEYVPLCLAAGVCPDNPRAFFSQQMRWCMGSTTLLTNPEFWRSKLSFIQKVCYLSGMMYYSALSL 512
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: D7FQH7_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQH7_ECTSI) HSP 1 Score: 155 bits (393), Expect = 7.680e-42 Identity = 64/115 (55.65%), Postives = 91/115 (79.13%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATAM 345
VN ++F+AA+CVG+CG+YRR+A+ PFGG A I +SED++TG+ LGYKV+Y+P +AMG CP EPR+ FMQ YRWCMG++TL+ EFW+S ++ K+C+ +GML+Y ATA+
Sbjct: 594 VNLDRFNAAVCVGSCGLYRRTAVEPFGGVAPIEHSEDMYTGYKMTELGYKVRYLPLCLAMGICPDEPRSFFMQQYRWCMGTSTLVLQKEFWQSEISKIHKLCFFNGMLFYLATAL 708
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Match: M1ICG9_9PHYC (Cellulose synthase catalytic subunit (UDP-forming) n=9 Tax=Chlorovirus TaxID=181083 RepID=M1ICG9_9PHYC) HSP 1 Score: 153 bits (386), Expect = 9.880e-42 Identity = 69/114 (60.53%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 1 VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKVKYIPQVMAMGTCPHEPRALFMQHYRWCMGSTTLLCNAEFWRSNLTVRQKICYLSGMLYYAATA 342
V+R+ F A+CVGTC VYRR AL PFGGTA I +SEDVHTGF G+K+KYIP +A G CP+E ++ F Q YRW +GSTTL N FW+SNL+ RQK C+LSGMLY+ TA
Sbjct: 267 VSRDTFGGAVCVGTCAVYRREALVPFGGTAEIGFSEDVHTGFAVVDDGWKLKYIPLNLAKGVCPYELKSFFSQQYRWALGSTTLCTNPHFWKSNLSFRQKACFLSGMLYFQVTA 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135485.2509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig135485.2509.1 >prot_H-elongata_contig135485.2509.1 ID=prot_H-elongata_contig135485.2509.1|Name=mRNA_H-elongata_contig135485.2509.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp VNRNKFDAAICVGTCGVYRRSALAPFGGTAAIAYSEDVHTGFNCKRLGYKback to top mRNA from alignment at H-elongata_contig135485:297..1024- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig135485.2509.1 ID=mRNA_H-elongata_contig135485.2509.1|Name=mRNA_H-elongata_contig135485.2509.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=728bp|location=Sequence derived from alignment at H-elongata_contig135485:297..1024- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig135485:297..1024- >mRNA_H-elongata_contig135485.2509.1 ID=mRNA_H-elongata_contig135485.2509.1|Name=mRNA_H-elongata_contig135485.2509.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=690bp|location=Sequence derived from alignment at H-elongata_contig135485:297..1024- (Himanthalia elongata Himel1 dioecious)back to top |