mRNA_H-elongata_contig135455.2506.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.930e-47 Identity = 133/433 (30.72%), Postives = 217/433 (50.12%), Query Frame = 1
Query: 1 WANDSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
W D+G HMT A ++D P V GG ++ G L L+ ++ F+ + LK+V + PNLG +NL S +F + G+ F ++ +G+L +A+ RL + LAA + + ++ +FH + H + + R TA+ G +L G C CS ++ + + + T++R+D++ GR+F+D+ G S+ G + M+ DDFTR + F+KHKSDA A R + A +G+ + ++R+D+GGE+ G +F S +E+ IK++ TP Y+PQYNGV ER LGL+ + +A +L G ++ K+D+LWA+AM + C+ N S+ SPYE+WYG P+ P Y R +P KL P+G SC + + D
Sbjct: 525 WYADTGTAFHMTDSLACMKDLKP--CHKSVNGIGGVSCEISFSGTLELVFVTADSEFS-----MELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFKGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRD 933
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.680e-47 Identity = 133/433 (30.72%), Postives = 217/433 (50.12%), Query Frame = 1
Query: 1 WANDSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
W D+G HMT A ++D P V GG ++ G L L+ ++ F+ + LK+V + PNLG +NL S +F + G+ F ++ +G+L +A+ RL + LAA + + ++ +FH + H + + R TA+ G +L G C CS ++ + + + T++R+D++ GR+F+D+ G S+ G + M+ DDFTR + F+KHKSDA A R + A +G+ + ++R+D+GGE+ G +F S +E+ IK++ TP Y+PQYNGV ER LGL+ + +A +L G ++ K+D+LWA+AM + C+ N S+ SPYE+WYG P+ P Y R +P KL P+G SC + + D
Sbjct: 232 WYADTGTAFHMTDSLACMKDLKP--CHKSVNGIGGVSCEISFSGTLELVFVTADSEFS-----VELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFKGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRD 640
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.130e-45 Identity = 136/435 (31.26%), Postives = 215/435 (49.43%), Query Frame = 1
Query: 1 WANDSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFA---PEGLKIGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
W D+G HMT + ++D P V G VA G L L+ ++ F+ + LK+V + NLG +N+ S + FD P + G+ F ++ +G+L +A+ RL + LAA + +I +FH + H E + R TA+ G +L G C CS S+ R +++ T+ R+D++ GR+F+D+ G S+ G + M+ DDFTR + F+K++SDA A R + A P ++I +R+D+GGE+ G +F S +E+ IK++ TP Y+PQYNGV ER LGL+ + +A +L G ++ K+D+LWA+AM + C+ N S+ SPYE+WYG P+ P Y R +P KL P+G SC + + D
Sbjct: 113 WYADTGTAFHMTDSLSCMKDLKP--CHKSVNGIGSVSCEVAFSGTLELVFVTADSEFS-----VELKNVLYSQNLG-YNIFSP---SAEFDGESWNGPGGPDGVMTAFNGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRD 521
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.450e-45 Identity = 137/423 (32.39%), Postives = 204/423 (48.23%), Query Frame = 1
Query: 10 DSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 1236
D+GAT HM + G Y RV+ A G P+ GYG + + + + T L LK VAHVP L +NL+S LT FD + RGG + + P R N ++ R H P A A + +I FH GH E + R TA+ G L G + C+ CS ++ + T RA ++ R+F+D+SG SL G + ++ DD+TR+ V F+KHKSDA A + + A + V+R+D+GGE+ G+F + IK++ TP ++P+YNGV ERALGL++D +A L G S LWA+A+A++C+ N +++S SPYE+W+G P PP T +L+ ++K HK P+ C L
Sbjct: 372 DTGATTHMFANSDGFVRYEECDR--RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 771
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.460e-45 Identity = 137/423 (32.39%), Postives = 204/423 (48.23%), Query Frame = 1
Query: 10 DSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 1236
D+GAT HM + G Y RV+ A G P+ GYG + + + + T L LK VAHVP L +NL+S LT FD + RGG + + P R N ++ R H P A A + +I FH GH E + R TA+ G L G + C+ CS ++ + T RA ++ R+F+D+SG SL G + ++ DD+TR+ V F+KHKSDA A + + A + V+R+D+GGE+ G+F + IK++ TP ++P+YNGV ERALGL++D +A L G S LWA+A+A++C+ N +++S SPYE+W+G P PP T +L+ ++K HK P+ C L
Sbjct: 385 DTGATTHMFANSDGFVRYEECDR--RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 784
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.480e-45 Identity = 137/423 (32.39%), Postives = 204/423 (48.23%), Query Frame = 1
Query: 10 DSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 1236
D+GAT HM + G Y RV+ A G P+ GYG + + + + T L LK VAHVP L +NL+S LT FD + RGG + + P R N ++ R H P A A + +I FH GH E + R TA+ G L G + C+ CS ++ + T RA ++ R+F+D+SG SL G + ++ DD+TR+ V F+KHKSDA A + + A + V+R+D+GGE+ G+F + IK++ TP ++P+YNGV ERALGL++D +A L G S LWA+A+A++C+ N +++S SPYE+W+G P PP T +L+ ++K HK P+ C L
Sbjct: 528 DTGATTHMFANSDGFVRYEECDR--RVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFETKTLNKHELELERGGGEVVYFP-RCGNLYVQNGFRTHTEHACAAIAPGNAKAPSTPV----DINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 927
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.150e-44 Identity = 96/272 (35.29%), Postives = 153/272 (56.25%), Query Frame = 1
Query: 466 NIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
+I +FH + H E + R TA+ G +L G C CS S+ R +++ T+ R+D++ GR+F D+ G S+ G + ++ DDFTR + F+++KSDA +A R + A G+ + ++R+D+GG++ G F S +E+ IK++ TP Y+PQYNGV ER LGL+ + +A +L G ++ K+D+LWA+AM + C+ N S+ SPYE+WYG P+ P Y R +P KL P+G SC + + D
Sbjct: 33 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVGPSRD 301
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 175 bits (443), Expect = 2.610e-44 Identity = 130/433 (30.02%), Postives = 210/433 (48.50%), Query Frame = 1
Query: 1 WANDSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
W D+G HMT + ++D P VK GG + G L L+ ++ F + L++V + PNLG +NL S +F + G F ++ +G+L ++ RL + LAA ++ +FH + H E + R TA+ G++L+G C CS S+ + + T+ R+D++ GR+F+D+ G S+ G + M+ DDFTR + F+K KSDA +A R + A +G+ + ++R+D+GGE+ G +F S +E+ IK++ TP Y+PQYNGV ER LGL+ +A +L G ++ K+DRLWA+AM + C+ N S+ SPYE+W+G P + Y R +P KL P+G +C + + D
Sbjct: 431 WYADTGTAFHMTDRLSCMKDLKP--CHKNVKGIGGVTCEIEFSGTLELVFVTADSQFP-----VELENVLYSPNLG-YNLFSPS--AEFDGESWNYLGGPDGVMTAFNGHVTF----QNLDGML-------ISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARPYPFLKPA-YCRWQRPS-KLLPKGEACFYVGPSRD 839
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE) HSP 1 Score: 174 bits (441), Expect = 4.810e-44 Identity = 128/409 (31.30%), Postives = 204/409 (49.88%), Query Frame = 1
Query: 73 PAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAFIRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAAT------QRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK--IGVIRTDDGGEWHG-QFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA------LLRGVIE-SKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLRRLKPGHKLAPRGASCIMLELASD 1251
P V GG VA G L L+ ++ F+ + LK+V + PNLG +NL S +F + G+ F ++ +G+L +A+ RL + LAA + +I +FH + H E + R TA+ G +L G C CS S+ R +++ T+ R+D++ GR+F+D+ G S+ G + M+ DDFTR + F+++KSDA +A R + A G+ + ++R+D+GGE+ G +F S +E+ IK++ TP Y+PQYNGV ER LGL+ + +A +L G ++ K+D+LWA+AM + C+ N S+ PYE+WYG P+ P Y R +P KL P+G SC + + D
Sbjct: 13 PCHKSVNGIGGVSCEVAFSGTLELVFVTADSEFS-----VELKNVLYSPNLG-YNLFSPS--AEFDGESWNGLGGPDGVMTAFNGQVTF----QNFDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRD 399
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE) HSP 1 Score: 174 bits (442), Expect = 4.990e-44 Identity = 137/423 (32.39%), Postives = 199/423 (47.04%), Query Frame = 1
Query: 10 DSGATEHMTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSTRQLTLKHVAHVPNLGQHNLLSTKRLTQFFDAPMRVYPAAAF-IRPRRGGKPLFFRPLRSENGLLEIKVRRHVAAKSRLPKPPTAAALAATQRGSRNIMKFHQVLGHPAEQITRNTARMAGVQLSGTWQTCVHCSKSRVRRYAVLKSTENRADRRAGRLFIDISGPFHETSLRGNRFVMLCIDDFTRFKIVCFVKHKSDATNALRDIINDYFAPEGLK-IGVIRTDDGGEW-HGQFLSFLSEIGIKRQSTPPYTPQYNGVVERALGLLRDKTVA-------LLRGVIESKSDRLWAQAMAYTCDMWNRCTSSSLDSGTSPYELWYGRRPKFDNIPPVGTVGYLR----RLKPGHKLAPRGASCIML 1236
D+GAT HM + G Y RV+ A G P+ GYG + + + T L LK VAHVP L +NL+S LT FD + + RGG + P R N + R H P A A +A I FH GH E + R TA+ G L G + C+ CS ++ + T RA +R R+F+D+SG SL G + ++ D +TR+ V F+KHKSDA A + + A + V+R+D+GGE+ G+F + IK++ TP ++P+YNGV ERALGL++D +A L G S WA+A+A+ C+ N +++S SPYE+W+G P PP T +L+ ++K HK P+ C L
Sbjct: 398 DTGATTHMFANSDGFVRYEECDR--RVRVAAGETFPIVGYGDVTVTLSSRGG-----TTDLLLKRVAHVPRL-DYNLVS---LTSLFDDGFQTKTLNKHELELERGGGESVYSP-RCGNLYVHNGCRTHTEHAYTAIAPGDAKASSAPVE----INDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPS--FWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYL 797 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135455.2506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig135455.2506.1 >prot_H-elongata_contig135455.2506.1 ID=prot_H-elongata_contig135455.2506.1|Name=mRNA_H-elongata_contig135455.2506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=407bp MTKDPAGLEDYTPTPAGDRVKSAGGTLLPVAGYGHLRLLVGQGNNNFANSback to top mRNA from alignment at H-elongata_contig135455:502..1752+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig135455.2506.1 ID=mRNA_H-elongata_contig135455.2506.1|Name=mRNA_H-elongata_contig135455.2506.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1251bp|location=Sequence derived from alignment at H-elongata_contig135455:502..1752+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig135455:502..1752+ >mRNA_H-elongata_contig135455.2506.1 ID=mRNA_H-elongata_contig135455.2506.1|Name=mRNA_H-elongata_contig135455.2506.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2442bp|location=Sequence derived from alignment at H-elongata_contig135455:502..1752+ (Himanthalia elongata Himel1 dioecious)back to top |