mRNA_H-elongata_contig13539.2504.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13539.2504.1
Unique NamemRNA_H-elongata_contig13539.2504.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: D7G6U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U7_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 6.850e-73
Identity = 131/242 (54.13%), Postives = 172/242 (71.07%), Query Frame = 1
Query:    7 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQ-TGNGPSVILEGGLADVSVALAKLTYTS 729
            SKT+Q+IV A+ND P + G   + AEEDT + V G++V+DPDCDD PRG++E+ + ASNGT+Q  GSVA LYLMEA  G+LK+RGKTGPVNAALAGL Y G AE+SG D +V T DDLG+SG G  L +S+S+++ V+  NDPPLI  P EL++  GGVLF +ED+ +PLG FGV+D D+ F+R  +S   G+VG   I+ +  ++ + ST E  T  G SV  EG   +VS AL  LTYTS
Sbjct:  986 SKTIQIIVDAINDGPSLTGPLAIEAEEDTSITVNGVAVQDPDCDDAPRGVLEITVAASNGTVQFIGSVAGLYLMEALPGSLKVRGKTGPVNAALAGLSYEGVAEFSGTDKIVVTADDLGHSGTGSQLSASWSIDVLVSASNDPPLIQAPPELDLIVGGVLFVVEDESSPLGVFGVSDIDDPFLRVTVSARVGNVGYGGIE-EVGMVAVASTDETPTATGSSVSFEGTADEVSDALGSLTYTS 1226          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A6H5KBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW5_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 1.510e-71
Identity = 126/241 (52.28%), Postives = 165/241 (68.46%), Query Frame = 1
Query:    7 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTYTS 729
            +KT+++IV A+ND P + G   +  EEDTP+ V G++V+DPDCDD PRG++E+ + ASNGT+Q  GSVA LYLMEA  G+LK+RGKTGPVNAALAGL Y G AE+SG D +V T DDLG+SG G  L +S+S+ + V+  NDPPLI  P EL++  GGVLF +ED+ +PLG FGV+D D+ F+R  +S   G+VG   I+    + V          G SV  EG   +VS AL  LTYTS
Sbjct: 1010 TKTIEIIVDAINDGPSLIGPLAIEVEEDTPITVNGVAVQDPDCDDAPRGVLEITVAASNGTVQFIGSVAGLYLMEALPGSLKVRGKTGPVNAALAGLSYEGVAEFSGTDRIVVTADDLGHSGTGSQLSASWSIEVLVSASNDPPLIQAPPELDLIAGGVLFVVEDESSPLGVFGVSDMDDPFLRVTVSARVGNVGYGGIEEVGMVAVASRDETPPATGSSVSFEGTADEVSDALGSLTYTS 1250          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI0019BDBD8B (Pre-peptidase C-terminal domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019BDBD8B)

HSP 1 Score: 98.2 bits (243), Expect = 1.150e-19
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 1
Query:   10 KTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVA-SLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF--VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 723
            +T  + V AVND PI    N  +  EDT +A+ GIS+ D D   +P  +    ++  +GTLQLG +   ++      S ++   G    +NAAL+GL Y G   ++G DTL  T +D G +G G     S  + ITVAPVND P+I+ P    +         ED    L    V D D+    +  I+S+  G++  D + A SS + + +T +                ++ A+A LTY
Sbjct: 1884 QTFTINVTAVNDAPIFTLPNPPSVSEDTTLAIAGISLADVDSGSSPLVVA---LSVVSGTLQLGNTAGLTITAGSNNSSSVAFSGNLNDINAALSGLSYRGNLNFNGADTLTLTANDQGATGAGAIGIDSRVLGITVAPVNDAPVITIPGSQTVD--------EDTNLLLSGISVTDADSNPNPITVIVSSTNGTLTLDPLVAGSSTLTLTNTLDA---------------INTAIANLTY 2098          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001CC9CAF3 (cadherin-like domain-containing protein n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CC9CAF3)

HSP 1 Score: 95.1 bits (235), Expect = 1.250e-18
Identity = 71/244 (29.10%), Postives = 112/244 (45.90%), Query Frame = 1
Query:    7 SKTVQVIVGAVNDRPIIN-GLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIR--GKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF--VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 723
            S T  + V   ND+P++      L A++    A+ GI++ DPD      G V + ++A+NG L +G      ++    + +  +R  G    VN AL  L Y   + + G DT+   V+D GN+GVGG L  S S+++ V P+N PPLI+ P            A ED    +    ++D D     V   ++ + G V    + + S + ++  T  Q  N   V   G LA V+  L  L Y
Sbjct:  590 SNTFDIAVTPANDQPVLTLPTGTLTADQGANAAISGITISDPD---VANGSVTVTLSAANGLLSVGLKTGLTFIQGTGTQDATMRFSGTLSTVNTALTSLIYRSNSTFKGTDTIAINVNDNGNTGVGGPLSDSKSLDVVVTPINKPPLITLPASP--------IANEDTNLTISGISISDIDGNGGPVTVSLTAVHGVVS---LSSTSGITLVTGTGSQDRN---VTFTGTLASVNAVLNNLVY 816          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001BAEFBC7 (Ig-like domain-containing protein n=1 Tax=Acaryochloris marina TaxID=155978 RepID=UPI001BAEFBC7)

HSP 1 Score: 95.1 bits (235), Expect = 1.360e-18
Identity = 64/193 (33.16%), Postives = 95/193 (49.22%), Query Frame = 1
Query:    7 SKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPS---GNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTI 576
            ++TV + V  VND P++      A +E+T + V GIS+ D D D    G +E+ ++A+NG + L   +  L   +        L  RG    +N AL+ L Y G A Y+G DTL   V+DLGN+G GGAL  S ++NI VA  N  P+    + L +       A +   TPL      D D + +   +  I
Sbjct:  852 TQTVDIAVTPVNDAPLLTVPGAQAVDENTDLVVSGISINDVDVD---SGELEVTLSATNGVMSLS-QITGLAFTQGDGITDSTLIFRGTLSDINQALSNLIYRGNANYNGFDTLSIAVNDLGNTGEGGALTDSTTINIAVAATNSAPVADPDKTLTV-------AEDSGATPLAINAPTDSDGDVLTVTVDEI 1033          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A7Y7CTW5_9GAMM (Tandem-95 repeat protein (Fragment) n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A7Y7CTW5_9GAMM)

HSP 1 Score: 94.4 bits (233), Expect = 2.510e-18
Identity = 79/243 (32.51%), Postives = 120/243 (49.38%), Query Frame = 1
Query:   16 VQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGI----SVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGN--LKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPS-VILEGGLADVSVALAKLTY 723
            V++ V  VND P+I      +  EDT V   G     S+   D D     ++E+ + A NG L LG S+ +L ++    G   + +RG    +++A  GL Y   A ++G DTL   +DDLGNSG GGAL    S +ITV+ VND P++S P +++++        ED L   GT        + V    STI  ++     + D +L  +     Q+GNG S V + G  A +  A+  L+Y
Sbjct: 4391 VRIYVTGVNDAPVITFTGSPSTSEDT-VLTYGSGETQSITIADIDAGASDLLEMTVRADNGALTLG-SMTNLSVVGGADGTSLVTVRGTLTDLDSAFDGLVYTPDANFNGTDTLTVKLDDLGNSGSGGALSHEVSQSITVSAVNDAPVLSVPSDISVN--------EDSLIYFGTNETQQIIFDDVDVTASTIM-TLQLSASNGDITLGSVAGLASQSGNGTSSVTVTGTQAVLRSAIEGLSY 4622          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A844MYE7_9CYAN (DUF4347 domain-containing protein n=1 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MYE7_9CYAN)

HSP 1 Score: 94.0 bits (232), Expect = 3.320e-18
Identity = 75/253 (29.64%), Postives = 127/253 (50.20%), Query Frame = 1
Query:    4 VSKTVQVIVGAVNDRPIINGLNL-LAAEEDTPVAVVG---ISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGN--LKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGA------LRSSFSVNITVAPVNDPPLISTPRELNISGGG-VLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTY 723
            ++ +V + V ++ND P+ N LN  L   EDTP+   G   IS+ D D  + P   VE+++TA+NGT+ L  S   L   +  +G+  +   G    +N ALAG+ +    E SG  ++     DLGNSG+         L ++ ++NI +  VNDPP+   P +L       ++F+ E+         ++DPD      I  T   + GT  +   + L + +  ++   N  ++IL G +AD++ ALA +T+
Sbjct: 2106 ITNSVSIDVQSINDAPVNNVLNKELTTLEDTPIVFSGNNLISISDIDAGNQP---VEVILTATNGTIALS-STKELQFTQGSNGSNGMMFTGTIANINTALAGMTFNPTPEASGSASIKIRTSDLGNSGIPNTPDDEEVLTATDTININIQSVNDPPINQVPGKLTTDEDKPIVFSKENG----NLISISDPDAG-ANPIQVTFVVTNGTLSLSGTTGLNIWNGNSDGLNNA-TMILSGTIADINTALAGMTF 2348          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: A0A537MBV0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MBV0_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 3.670e-18
Identity = 67/196 (34.18%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   16 VQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTL---QLGGSVASLYLMEAPSGNLKIRGKTGPVNAALA---GLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGS 585
            V V VGAVND P+      +AA ED PVA+ G+SV D D + +   I   L     GT     + G + +  +    SG++ + G    +NA LA   G+ Y  AA+Y+G DTL  T  D G+ G GGAL  S +V IT+AP ND P             G +   ED  +     G +D D + +   +   FG+
Sbjct:  523 VVVTVGAVNDAPVNVVGGAVAASEDVPVAITGLSVSDVDANPSADVISVTLSVGHGGTTVRTDVVGGLTAADISGNGSGSVVLSGTQNAINATLAAANGVVYASAADYNGSDTLTMTTSDNGHGGSGGALGDSDTVAITIAPTNDAP--------TAPASGSVSTNEDTPSAATAIGASDVDGDTLSYSVKPGFGA 710          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: T0QLQ2_SAPDV (Cadherin domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QLQ2_SAPDV)

HSP 1 Score: 92.8 bits (229), Expect = 8.520e-18
Identity = 71/233 (30.47%), Postives = 110/233 (47.21%), Query Frame = 1
Query:   73 LAAEEDTPVAVVGISVEDPDCDDTPRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPP--------LISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNG------PSVILEGGLADVSVALAKLTYTS 729
            +A +EDTP  + G+ V D D  DT    V++ +   +G  QL  S A L ++E   G L ++G    +N AL    Y+GA  Y GQD++V T +DLGN+G GG  ++S ++ + +  V DPP        L STP +  +   G L   +   +      V D D    R +  +I  +VG   +   + L   H T   T +G       +  + G + D++ AL  L Y S
Sbjct: 5484 IAIDEDTPYTLHGLVVTDDDAADTFGSEVQVTLACEHGHFQLDTSTAGLDILEEEPGLLHVQGPLELINYALQRATYVGALNYFGQDSIVVTANDLGNTGTGGPQQASATMAVVITSVCDPPTWASTPPALFSTPEDTPLLLSGALRLQDVDAS------VMDVD----RVLTLSISVAVGGVLLATHAGL---HVTASSTNDGVGHLYYSTATIAGTVDDLNAALRGLMYLS 5703          
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Match: UPI001CA75A4E (Ig-like domain-containing protein n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA75A4E)

HSP 1 Score: 92.4 bits (228), Expect = 1.110e-17
Identity = 80/249 (32.13%), Postives = 118/249 (47.39%), Query Frame = 1
Query:    7 SKTVQVIVGAVNDRPIINGLN-LLAAEEDTPVAVVGISVEDPDCDDT----PRGIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLEYIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLISTPRELNISGGGVLFAMEDQLTPLGTFGVADPDNEF----VRTIISTIFGSVGTDEIDADSSLIVIHSTTEQTGNGP-SVILEGGLADVSVALAKLTY 723
            ++T+ V + AVND P++  +N  +   EDTP+ + GISV D D   +       +++  + A+ GT  + G+  SL         L I G    VNAAL  L Y G  +Y G D  + TV+DLGN+G+GGAL  + +++I V PVNDPP       L    G V  A +  L   G   +   D +     VR  +S   G++         ++     TT    NG  S   EG +  ++ ALA L Y
Sbjct: 1795 TQTLTVNINAVNDAPVLTLVNSTITGAEDTPILLSGISVTDVDAGTSNIQVTVSVLQGTLNATPGTTTVTGAGTSL---------LTITGAQNAVNAALNTLTYQGNLDYFGPDEAIVTVNDLGNTGIGGALTDTRTLSINVTPVNDPPTF-----LAFPTGPVPVAEDTNLIFTGGRAIVVTDVDSGPNPVRLTLSVNNGTL---------TMNTSGLTTIAGANGSQSATYEGTINAITTALASLVY 2020          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13539.2504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6U7_ECTSI6.850e-7354.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBW5_9PHAE1.510e-7152.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019BDBD8B1.150e-1931.12Pre-peptidase C-terminal domain-containing protein... [more]
UPI001CC9CAF31.250e-1829.10cadherin-like domain-containing protein n=1 Tax=Ko... [more]
UPI001BAEFBC71.360e-1833.16Ig-like domain-containing protein n=1 Tax=Acaryoch... [more]
A0A7Y7CTW5_9GAMM2.510e-1832.51Tandem-95 repeat protein (Fragment) n=1 Tax=Oceano... [more]
A0A844MYE7_9CYAN3.320e-1829.64DUF4347 domain-containing protein n=1 Tax=Scytonem... [more]
A0A537MBV0_9PROT3.670e-1834.18Uncharacterized protein (Fragment) n=1 Tax=Alphapr... [more]
T0QLQ2_SAPDV8.520e-1830.47Cadherin domain-containing protein n=1 Tax=Saprole... [more]
UPI001CA75A4E1.110e-1732.13Ig-like domain-containing protein n=1 Tax=Leptothe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13539contigH-elongata_contig13539:7070..7798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.2
Seed ortholog evalue6.1e-65
Seed eggNOG ortholog2880.D7G6U7
EggNOG OGs28IVJ@1,2QR77@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size729
Cds size729
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929804.248217-CDS-H-elongata_contig13539:7069..77981622929804.248217-CDS-H-elongata_contig13539:7069..7798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13539 7070..7798 +
1691679163.9033744-CDS-H-elongata_contig13539:7069..77981691679163.9033744-CDS-H-elongata_contig13539:7069..7798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13539 7070..7798 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13539.2504.1prot_H-elongata_contig13539.2504.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13539 7070..7798 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13539.2504.1

>prot_H-elongata_contig13539.2504.1 ID=prot_H-elongata_contig13539.2504.1|Name=mRNA_H-elongata_contig13539.2504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
IVSKTVQVIVGAVNDRPIINGLNLLAAEEDTPVAVVGISVEDPDCDDTPR
GIVELLITASNGTLQLGGSVASLYLMEAPSGNLKIRGKTGPVNAALAGLE
YIGAAEYSGQDTLVFTVDDLGNSGVGGALRSSFSVNITVAPVNDPPLIST
PRELNISGGGVLFAMEDQLTPLGTFGVADPDNEFVRTIISTIFGSVGTDE
IDADSSLIVIHSTTEQTGNGPSVILEGGLADVSVALAKLTYTS
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mRNA from alignment at H-elongata_contig13539:7070..7798+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13539.2504.1 ID=mRNA_H-elongata_contig13539.2504.1|Name=mRNA_H-elongata_contig13539.2504.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=729bp|location=Sequence derived from alignment at H-elongata_contig13539:7070..7798+ (Himanthalia elongata Himel1 dioecious)
ATAGTGAGCAAGACCGTCCAAGTTATAGTCGGAGCTGTGAACGACAGACC CATAATAAATGGCTTGAACCTTCTAGCGGCTGAAGAGGACACTCCAGTGG CTGTGGTAGGAATCAGCGTGGAGGACCCAGATTGTGACGACACTCCGAGG GGGATTGTGGAACTATTGATCACCGCCTCGAACGGTACACTGCAGTTGGG TGGGTCCGTGGCAAGTCTGTATCTTATGGAGGCACCTTCCGGGAATTTGA AAATCCGTGGAAAGACCGGACCTGTGAACGCTGCGCTAGCGGGGCTAGAA TATATTGGTGCCGCAGAGTATAGCGGGCAAGATACTCTGGTATTTACTGT CGACGATCTCGGCAATAGCGGCGTGGGGGGAGCGCTGCGGTCGAGTTTTT CCGTAAATATCACCGTGGCACCCGTCAATGACCCTCCACTTATTTCCACT CCAAGGGAGTTGAATATTTCCGGCGGCGGTGTACTGTTTGCTATGGAGGA TCAGCTGACTCCCTTGGGGACGTTTGGAGTCGCTGACCCCGATAATGAAT TCGTGCGAACAATAATCTCGACAATTTTTGGAAGCGTCGGCACCGATGAA ATCGATGCCGACAGTTCGCTGATAGTCATCCATAGTACGACGGAACAAAC AGGAAATGGGCCAAGTGTTATACTGGAGGGTGGTCTAGCTGACGTTAGTG TCGCCCTCGCCAAACTGACGTATACAAGT
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Coding sequence (CDS) from alignment at H-elongata_contig13539:7070..7798+

>mRNA_H-elongata_contig13539.2504.1 ID=mRNA_H-elongata_contig13539.2504.1|Name=mRNA_H-elongata_contig13539.2504.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1458bp|location=Sequence derived from alignment at H-elongata_contig13539:7070..7798+ (Himanthalia elongata Himel1 dioecious)
ATAGTGAGCAAGACCGTCCAAGTTATAGTCGGAGCTGTGAACGACAGACC
CATAATAAATGGCTTGAACCTTCTAGCGGCTGAAGAGGACACTCCAGTGG
CTGTGGTAGGAATCAGCGTGGAGGACCCAGATTGTGACGACACTCCGAGG
GGGATTGTGGAACTATTGATCACCGCCTCGAACGGTACACTGCAGTTGGG
TGGGTCCGTGGCAAGTCTGTATCTTATGGAGGCACCTTCCGGGAATTTGA
AAATCCGTGGAAAGACCGGACCTGTGAACGCTGCGCTAGCGGGGCTAGAA
TATATTGGTGCCGCAGAGTATAGCGGGCAAGATACTCTGGTATTTACTGT
CGACGATCTCGGCAATAGCGGCGTGGGGGGAGCGCTGCGGTCGAGTTTTT
CCGTAAATATCACCGTGGCACCCGTCAATGACCCTCCACTTATTTCCACT
CCAAGGGAGTTGAATATTTCCGGCGGCGGTGTACTGTTTGCTATGGAGGA
TCAGCTGACTCCCTTGGGGACGTTTGGAGTCGCTGACCCCGATAATGAAT
TCGTGCGAACAATAATCTCGACAATTTTTGGAAGCGTCGGCACCGATGAA
ATCGATGCCGACAGTTCGCTGATAGTCATCCATAGTACGACGGAACAAAC
AGGAAATGGGCCAAGTGTTATACTGGAGGGTGGTCTAGCTGACGTTAGTG
TCGCCCTCGCCAAACTGACGTATACAAGTATAGTGAGCAAGACCGTCCAA
GTTATAGTCGGAGCTGTGAACGACAGACCCATAATAAATGGCTTGAACCT
TCTAGCGGCTGAAGAGGACACTCCAGTGGCTGTGGTAGGAATCAGCGTGG
AGGACCCAGATTGTGACGACACTCCGAGGGGGATTGTGGAACTATTGATC
ACCGCCTCGAACGGTACACTGCAGTTGGGTGGGTCCGTGGCAAGTCTGTA
TCTTATGGAGGCACCTTCCGGGAATTTGAAAATCCGTGGAAAGACCGGAC
CTGTGAACGCTGCGCTAGCGGGGCTAGAATATATTGGTGCCGCAGAGTAT
AGCGGGCAAGATACTCTGGTATTTACTGTCGACGATCTCGGCAATAGCGG
CGTGGGGGGAGCGCTGCGGTCGAGTTTTTCCGTAAATATCACCGTGGCAC
CCGTCAATGACCCTCCACTTATTTCCACTCCAAGGGAGTTGAATATTTCC
GGCGGCGGTGTACTGTTTGCTATGGAGGATCAGCTGACTCCCTTGGGGAC
GTTTGGAGTCGCTGACCCCGATAATGAATTCGTGCGAACAATAATCTCGA
CAATTTTTGGAAGCGTCGGCACCGATGAAATCGATGCCGACAGTTCGCTG
ATAGTCATCCATAGTACGACGGAACAAACAGGAAATGGGCCAAGTGTTAT
ACTGGAGGGTGGTCTAGCTGACGTTAGTGTCGCCCTCGCCAAACTGACGT
ATACAAGT
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