mRNA_H-elongata_contig13533.2496.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI) HSP 1 Score: 781 bits (2017), Expect = 2.930e-265 Identity = 400/565 (70.80%), Postives = 453/565 (80.18%), Query Frame = 2
Query: 647 RQGNRWLLDVGDWEAASKLFVQCAEPFRAAQLTCKGRREGWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDER--RQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVS--LSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRR-HGRYGTH--AQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGSC 2320
R+ W +VGDW AS+LF++ EP RAA++T KGR EGWQ ALAEI RSV KTE +LS+CGKELSLAG+DDLA+E Y+KMDD NV+ALYV+ QNWSEAVKLS+EH ++D VFLPYALWL D+GRFDEALEAF +AGRRDLSG MT QLILN+VAK RFDDASYYYW+SS EA+ AAE +++ E+ R+A A EHSR ADLYHAFHHVHSFTTDPFTDLQPEVLLQ SRFLVNSLG+AE PRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQR+PPLWQDQIDLDML VQAKPVRD+PELFAACFRCG SNPLLSP+T S L S LS T G LPWGDACTTCRHPFVRSFFNFESLPLVEF+P+PG+ ++ALELI + PQG R GR H +W EAKEG ADVM LGSDD G +DD E V G+E+FNRCIN LE QE++++Y V+ S +CL+ALKRE+VFRVPPGT PR +L+KNMMPDIPLALSQPCGRFFHE DFEF+YLR RCPFSRV+DVGDYGSC
Sbjct: 777 RRQAEWAEEVGDWSVASELFLKSGEPLRAAEITIKGRGEGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKHQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLILNSVAKARFDDASYYYWRSSTEAFAAAEKDKTKTSEKDIRKAQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRVPPLWQDQIDLDMLTVQAKPVRDSPELFAACFRCGASNPLLSPYTGASNSLGSTLSKMPRRTDGGGR--GRHDAPLPWGDACTTCRHPFVRSFFNFESLPLVEFQPDPGLTDEEALELITASPPQGGRGRGRKARHRGGNQWHEAKEGDADVMALGSDD--EGANDDDDLEGNYVPGEELFNRCINRTLEAQEDSSEYMVVVASAKCLRALKREDVFRVPPGTRSPRARLYKNMMPDIPLALSQPCGRFFHEEDFEFSYLRESRCPFSRVTDVGDYGSC 1337
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: F0XY87_AURAN (Intraflagellar transport protein 122 homolog n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY87_AURAN) HSP 1 Score: 468 bits (1203), Expect = 2.660e-145 Identity = 267/581 (45.96%), Postives = 353/581 (60.76%), Query Frame = 2
Query: 605 ASKSSRDARPNGQKRQGNRWLLDVGDWEAASKLFVQCAEPFRAAQLTCKGRREGWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQE--------HKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDERRQALARAYEHS-RAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGSC 2320
AS S D R R+ W +V DW AA+ ++V + RA +L + ++ W +A IARSV T + VL C + AG D LAREVY K+DD +L LYVR Q W+EA+KL+++ H+ F+ ++LPYA WL RFDEALEA+ K+GR D++ M QL NAV ++RF DA+YYYW + E + A +S D + AY ADLY+A++ + SF PFT LQPEVL Q +RFLVN LG EAP GIS+ L+ LAKQAK LGA+KLARFAYD+LQ ++P WQ+Q+D+DML + +KPVRDNPEL C+RCG +N LL+P T A+ +N+ G + +R D CT+C HPFVRSF NFE LPLVEF PE +G D+ALELIR P+ R R +W E+KEG A+VM++G DD ++DD+E+ +FN+CI+ L QE Y PV V L++L+RE VF+ P G R +K+ + D+ +A+SQ C RFFHE DFEF LR G CPFSRV DVGD+G C
Sbjct: 725 ASSDSIDTRD--LVRRQAEWAEEVEDWAAAADMYVSAGDAMRAVKLLGEHQQGNWTEQMAAIARSV--TGEDVLRQCARCFLAAGEDALAREVYAKLDDVEALLQLYVRKQQWAEAIKLAEDASAKFSNAHRAKFDQTLYLPYAEWLALHDRFDEALEAYRKSGRPDMAQHMMEQLTCNAVVESRFKDAAYYYWLLASETLHVASG-ESGDDVAVAKIMPAYSAQLHKADLYYAYNFIESFFL-PFTPLQPEVLFQCARFLVNGLGAREAPHGISKVKILFALAKQAKHLGAYKLARFAYDKLQHMKVPDEWQEQLDVDMLTIHSKPVRDNPELLPVCYRCGAANALLNPATNA-------------ATLSNKVGDERSR----DVCTSCGHPFVRSFLNFEILPLVEFIPEAPLGDDEALELIREAPPETGRDRR--KLRGQWNESKEGEANVMSMGGDDDAY--DDDDAED--------LFNKCIHRTLSNQEGVNSYAPVTVDAETLRSLRREHVFQCKPRAPGMRATYYKSAIADVHIAISQSCHRFFHEEDFEFQVLRDGACPFSRVKDVGDFGPC 1270
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A812QAW2_SYMMI (Ift122 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QAW2_SYMMI) HSP 1 Score: 421 bits (1082), Expect = 4.200e-136 Identity = 237/525 (45.14%), Postives = 324/525 (61.71%), Query Frame = 2
Query: 764 GWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDERRQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEA-PRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGR--RHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEE--DDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLV-SFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDI-PLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGS 2317
GWQ+AL ++ R+ P + VL+ CG+ L+ D LARE Y K+ D ++AL+V+ Q W EA KL+ E++G F+ VFLPYA WL Q R ++A++A++KAGR+DL+ + +L LNAV +TRF DASYYYW +K D + D Q EH+ ADLY+A+ + S+ TDPFT PE+L Q SRF++NSLG + + P GIS+A TLYTLA+Q+ +L A+KLAR +YDRL + ++P WQD+++ DML VQAKPVRDNP+ +C+RC ++NPLL+PFT N+ GD CT C HPFVRSF NF+ LPLVEF PEP I ++A+ELIRT+ R R + W E K G AD+MT GS +D GE+ +G S +E+F C+N LE Q Y PV V + L+ +KR EVF P + R ++NM+P++ +A+SQ C RFFH DFEF+YL CPFSR++DVG+YGS
Sbjct: 19 GWQLALIDVVRATPTDVRDVLAFCGEILTQHNEDALAREAYTKLGDVNKLMALFVKRQMWVEAAKLADENEGKFDSSVFLPYAEWLIIQDRCEDAIQAYNKAGRQDLARKILEELTLNAVVETRFKDASYYYWLLAK-------DIREGTDSNYQLEC---EHN--ADLYYAYSSIQSYVTDPFTSQSPELLFQVSRFIINSLGSSGSIPYGISKAATLYTLARQSMILEAYKLARHSYDRLNKLQIPSRWQDEVERDMLIVQAKPVRDNPDQLPSCYRCSSTNPLLNPFT--------------------------NKFAKGDVCTNCGHPFVRSFINFDILPLVEFVPEPSITDEEAVELIRTSPGAARSPRATNGESSKSGWNEGKVGHADMMTFGS--VDSNGEDVMGPGSMTSGPS-EELFANCLNKTLENQMNAMSYIPVTVDTVTLLQGMKRSEVFVCRPSSPEKRATFYRNMLPEVVEIAISQSCHRFFHLEDFEFSYLSNKSCPFSRLNDVGEYGS 502
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A8J2WGR4_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WGR4_9STRA) HSP 1 Score: 410 bits (1053), Expect = 6.250e-124 Identity = 235/557 (42.19%), Postives = 324/557 (58.17%), Query Frame = 2
Query: 671 DVGDWEAASKLFVQCAEPFRAAQLTCKGRREGWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFND--------IVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDERRQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGS 2317
+ DW AA+ L V +A +L + + +GW L+ I R V T + VL C + G D+ A+EVY+K+DD ++L LYVR Q+W A+KL+++ GTF++ ++LPYA WL RFDEALEA+ K+GR D + M +L NAV ++RF DASYYYW + E A +++D ++ ++ E ADLY+A+ HV F P+T L+PEVL Q +RFL+N LG EAP GISRA LYTLAKQAK GAFKLAR+AYD+L R ++P W+D++D++ L + A P+RD +L C+RCG SN LL+P ++ S S++ H D CT+C HPFVRSF NFE LPL+EF PE I ++AL+LI+ P+ + G E KE ADV+ ++DD E+R F R IN L+ Q +Y PV V L++L R EVF P G R +K+ +PD+ +ALSQ C RFFHE DFE+A L+ GRCP+SR DVGD+G+
Sbjct: 732 ETSDWSAAADLQVSAGNALQAVRLLHEHKPDGWIEKLSLIVRQV--TAEDVLRQCARAFLANGDDERAKEVYVKLDDVESLLGLYVRKQDWEAALKLAEDPSGTFSEETRAKFDEALYLPYAEWLAVHDRFDEALEAYRKSGREDRAARMVQELTFNAVVESRFKDASYYYWLLASETLRVA----AKKDNLQKVMSTYTEQLHRADLYYAYAHVEDFFL-PYTPLRPEVLFQCARFLINGLGGKEAPFGISRAKILYTLAKQAKTCGAFKLARYAYDKLLRMKLPDAWRDEVDVEALTIHAAPLRDKSDLLPVCYRCGASNALLNPASSHSQGSSV-----------------HR-----DVCTSCGHPFVRSFLNFEVLPLIEFVPEASISDEEALDLIK-EFPEDKNSG----------EGKE--ADVVF----------DDDDDEDR--------FTRAINDTLQAQAGADEYKPVTVDAETLRSLYRAEVFCCKPRQQGLRATYYKSAIPDVHMALSQSCHRFFHEDDFEYAVLKEGRCPYSRAKDVGDFGT 1228
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA) HSP 1 Score: 395 bits (1014), Expect = 3.980e-118 Identity = 237/579 (40.93%), Postives = 309/579 (53.37%), Query Frame = 2
Query: 647 RQGNRWLLDVGDWEAASKLFVQCAEPFRAAQLTCKGR--REGWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAED-PQSRQDERRQALARAYE-HSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETT-----------------QYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGSC 2320
RQ +W + DW A+ +++ + AA ++ + REGWQ L E LCG AG +LA EV K++D + ++AL+V+ Q+W AVKLS+EH G F+ VFLPYA WL GR+D+AL+A+ +AGR DLS QLI + R+ DA++Y+W S++E + +S D+ +A AYE HS ADLY+AF+HV SR+L+N LG E P GISR HTLYTLAKQAK LGA+KLAR A + LQR R+P WQ Q+D+DML++QA+PVRD EL C+RCG+S+PLLS GD C +C+HPFVRSF FE LPLVEF P GI + AL +IR P + R G +A W+E+K GADVM L D+ + + FN CIN AL+ QE + Y V+ R L L+R +V V P + F+NMM DI +A C RFFHE DFEFA LR +CPF R SDVGDYGSC
Sbjct: 745 RQQAKWAEETNDWRGAADMYLSAGDGMSAATISTRDAKTREGWQTVLIE--------------LCGDTFVAAGEHELALEVLSKLEDYSALMALHVQRQDWVAAVKLSEEHAGKFDQKVFLPYAEWLAATGRYDDALDAYRRAGRADLSLRTLRQLIETSAVMQRYKDAAHYHWLSAREVLGGLKGGARSGWDQEERAAYAAYEAHSLKADLYYAFYHV-------------------SRYLINILGTEEPPEGISRVHTLYTLAKQAKSLGAYKLARSALELLQRHRIPAAWQGQVDMDMLSIQARPVRDPQELLPVCYRCGSSSPLLST------------------------------RGEGDTCASCKHPFVRSFLTFEVLPLVEFRPADGISDEDALGMIRAR-PHDPKFRRKGGNANPWQESKVNGADVMNLADDNGNXXXXXXXXXXXXXXGSSDPFNACINAALDRQEAGSGXXXXXXXXXXXXXXXXXYAMVVADARALARLRRSDVHYVAPPPPLRTGRFFRNMMADIAVAACPACARFFHEDDFEFAVLRDRQCPFCRASDVGDYGSC 1259
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A7S3NI59_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI59_9STRA) HSP 1 Score: 363 bits (933), Expect = 3.460e-106 Identity = 233/576 (40.45%), Postives = 317/576 (55.03%), Query Frame = 2
Query: 647 RQGNRWLLDVGDWEAASKLFVQCAEPFRAAQLTCKGRREG---------WQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFN-DIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDER-RQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPP-LWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPW---GDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGV-SGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVS--DVGDYGSC 2320
R+ W + DW AA++++V +P R +L G G W LA++AR++ + VL C A DDLA E Y K+ D +++AL+VR + W EA+ L++++ G + ++ PYA WL RFDEAL+A+ K+G+ D + M QL LNAV ++RF DA YYYW + E A S D R AL + + R AD+Y+A++ + SF PFT QPE L A+RFL+N LG+ +AP GISRA LYTLA QAK LGAFKLARFAYD+LQ ++P L D ++LD+LA++AKP+RDNP+L C+RCG SNPLL+P + +R H + D CT+C HPFVRSF +F+ LPLVEF PE GI + AL+LIR P+ T A +K + S R G+ S D++FN+CI L + PV V L++L+RE+V+ P R + N +PD+ LA+S RFFHE DFEF LR GRCPFSRV D+GD G C
Sbjct: 810 RRQAAWAEETEDWAAAAEMYVSSGDPMRGVRLL--GEHLGGNSTEIDPTWLEQLAQLARTITGAPE-VLKQCATYFEQADRDDLALETYRKLGDIKSLVALHVRKERWHEAITLAEQNPGLVDLSGLYTPYAEWLALADRFDEALDAYRKSGKPDQAQHMMQQLTLNAVVESRFKDAGYYYWLLATECLKVASLQSSNDDHALRTALPQYRDRLRNADIYYAYNLIDSFFL-PFTPTQPEALFNAARFLINRLGNTDAPAGISRAKILYTLATQAKHLGAFKLARFAYDKLQHMKLPEDLDLDTLELDILAIRAKPLRDNPDLLPVCYRCGASNPLLNP-------------------AAHRHSGTHGTSTYCGGHDICTSCGHPFVRSFLDFDILPLVEFVPESGIDDNTALDLIREPPPRTTP-----TTATARLRSKIHDXXXXXVAS--------------REGLASSDDLFNKCIQKNLA-NSSSDSSIPVTVDTDTLRSLRREQVYVCKPIAPQMRATFYFNSLPDVHLAISHH--RFFHEEDFEFDVLRQGRCPFSRVKAQDLGDTGPC 1340
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A7S4D6V4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V4_HETAK) HSP 1 Score: 332 bits (852), Expect = 2.470e-104 Identity = 178/342 (52.05%), Postives = 231/342 (67.54%), Query Frame = 2
Query: 845 LSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAE------DPQSRQDERRQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIR 1852
+S G D A+EVYLK+ D + ++A+YVR Q+W AV LS+EH G F+ VFLPYA WL RFDEAL A+ KAGR D S + +QL NAV + RF DA+YYY+ E AAE + + R++ALA +++ A+LY A+ H++SFTTDPFT+LQPE+L Q SR+++N +G +AP GISR +TLYTLAKQAK LGA+KLARFAYDRL R+PP W+DQ+DLDML VQAKPVRD PE+ C+RCG SNPLL+P AS++ +G D GD+CT C HPFVRSF +FE LPLVEF +P + +++AL+LIR
Sbjct: 1 MSGVGADLAAKEVYLKLGDVSALMAIYVRRQDWEAAVALSEEHAGKFDRSVFLPYAEWLALNVRFDEALGAYRKAGRPDQSQKLMSQLTDNAVMEGRFKDAAYYYYLLGAECLRAAEVLGEAKGGELSEAARKKALAEYDNYNKLANLYFAYQHIYSFTTDPFTNLQPEMLFQVSRYVLNLMGAEDAPYGISRVNTLYTLAKQAKNLGAYKLARFAYDRLNLMRVPPAWRDQLDLDMLTVQAKPVRDTPEILPVCYRCGASNPLLAPAANA-------------ASASGHSGQDK-----GDSCTNCGHPFVRSFLSFEVLPLVEFRADPALSYEEALDLIR 324
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A7R9U7I4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7I4_9STRA) HSP 1 Score: 322 bits (824), Expect = 4.530e-100 Identity = 177/378 (46.83%), Postives = 228/378 (60.32%), Query Frame = 2
Query: 1256 RAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDD----IDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVF----RVPPGTCGP----------------RVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGS 2317
R ADLY+AF + SFT+DPFT L PEVL Q +R+++N LG + AP GISR HTLYTLAKQAK LGA+K ARFAY +LQ+ ++P WQDQID DMLA+QAKP+RDNPEL + C+RCG +N L GD C++C HPF+RSF NF+ LPLVEF PE I ++ALELIR+ P +H +W E + GAD +TLG D + G DDS + +F++C+N+AL+ QE T +Y PV+V R L +L+R+EVF VPP G R++ +KNM+ I +ALSQPCGRF HE +FE+AYL+ G CPFSRV D+GDY S
Sbjct: 1 RHADLYYAFQRIRSFTSDPFTSLLPEVLFQVARYIINCLGSSPAPYGISRVHTLYTLAKQAKALGAYKFARFAYQKLQQLKVPSRWQDQIDFDMLAIQAKPMRDNPELLSVCYRCGETNKSLLNMD-------------------------------GDMCSSCLHPFIRSFINFDILPLVEFVPEDRISEEEALELIRSAPPAASDRA---SHDSKWHETRGDGADFLTLGEDGKSGVTGIHGAVDDSTD--------LFSQCVNSALDKQEYTNRYCPVVVDARTLTSLRRDEVFVTRMAVPPERAGDVLPAVGGKGKDGAFIGRLRYYKNMLAGIHVALSQPCGRFAHEEEFEYAYLKEGGCPFSRVKDLGDYSS 336
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A6H5KUR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR3_9PHAE) HSP 1 Score: 305 bits (780), Expect = 8.710e-95 Identity = 165/272 (60.66%), Postives = 189/272 (69.49%), Query Frame = 2
Query: 1535 MLAVQ------AKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNR----LPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVFRVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSRVSDVGDYGSC 2320
MLAVQ AKPVRD+PELFAACFRCG SNPLLSP+T S S SL+ S G R PWGDACTTCRHPFVRS FNFESLPLVEF+P+PG +V +G + +W EAKEG ADVM LGSDD G +DD E + V G+E+FNRCIN LE QE++ +Y V+ S +CL+ALKRE+VFRVPPGT PR +L+KNMMPDIPLALSQPCGRFFHE DFEF+YLR RCPFSRV+DVGDYGSC
Sbjct: 1 MLAVQVMQKLSAKPVRDSPELFAACFRCGASNPLLSPYTGASNSL----GSSLSKMSRRTDGGGRGRHDAPFPWGDACTTCRHPFVRSSFNFESLPLVEFQPDPG-----------EDVEEGEKPAIV-VEMWQWHEAKEGDADVMALGSDDE---GADDDDLEGSYVPGEELFNRCINRTLEAQEDSNEYMVVVASAKCLRALKREDVFRVPPGTRSPRARLYKNMMPDIPLALSQPCGRFFHEEDFEFSYLRESRCPFSRVTDVGDYGSC 253
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Match: A0A6S7HZA4_PARCT (Intraflagellar transport 122 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HZA4_PARCT) HSP 1 Score: 310 bits (795), Expect = 6.490e-91 Identity = 185/550 (33.64%), Postives = 287/550 (52.18%), Query Frame = 2
Query: 647 RQGNRWLLDVGDWEAASKLFVQCAEPFRAAQLTCKGRREGWQIALAEIARSVPKTEKGVLSLCGKELSLAGYDDLAREVYLKMDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDEALEAFHKAGRRDLSGTMTAQLILNAVAKTRFDDASYYYWKSSKEAYYAAEDPQSRQDERRQALARAYEHSRAADLYHAFHHVHSFTTDPFTDLQPEVLLQASRFLVNSLGDAEAPRGISRAHTLYTLAKQAKVLGAFKLARFAYDRLQRQRMPPLWQDQIDLDMLAVQAKPVRDNPELFAACFRCGTSNPLLSPFTAVSLSSNLSPADSLTASSTNRTGYDHNRLPWGDACTTCRHPFVRSFFNFESLPLVEFEPEPGIGFDKALELIRTNVPQGRRHGRYGTHAQEWREAKEGGADVMTLGSDDIDVGGEEDDSEERAGVSGDEIFNRCINTALEFQEETTQYTPVLVSFRCLKALKREEVF--RVPPGTCGPRVKLFKNMMPDIPLALSQPCGRFFHEGDFEFAYLRGGRCPFSR 2290
+Q W D AA+ +++ E +A +L + GW L E+ R++ K E L C D A E+Y+KM D +++ L+V +++W EA L E + D V++PYA WL + RFDEA EAFHK+G++ + + QL NAV + RF+DA YYYWK S + + D + D + L + +++ A++YH +H + +T +PFTD PE L +R+L++ L E P GISR TL+ L+KQ K LGA+K+AR+AYD+LQ ++P +Q+ ID+ + +++KP DN E+ C+RC T+NPLL+ G+ C CR PFV SF +F+ LPLVEF E GI ++A++LI +VP R+ + +W E G + + SD+ D G ++D E+ + F++ T++ PV V L+++ R EVF R P + +K++MPD+ + L Q C R FH D++ L+ G CPF R
Sbjct: 249 KQQAEWAKSSNDPRAAADMYLTAGEHMKAIELIGEN---GWVEKLLEVGRNLNKAETEALKKCAHYFVKMDQHDYATEMYVKMGDIKSLIKLHVDTRHWDEAFHLL-EKQPDLKDDVYIPYANWLAENDRFDEAQEAFHKSGQQHKAVQVLEQLTHNAVVENRFNDAGYYYWKLSMQCLHVVLDQDGKTDT--EMLRKFHQYQTKAEIYHLYHSIQRYTDEPFTDHLPEALFNIARYLLHLLLK-ETPLGISRVATLFALSKQGKHLGAYKMARYAYDKLQSLKVPARFQELIDVGSITIRSKPFSDNEEVLPLCYRCSTTNPLLNSK--------------------------------GNHCINCRQPFVFSFSSFDVLPLVEFVLEDGISDEEAVKLIEADVPANRKKDK-----SQWNEVDMGNVQSLQI-SDEADGGDDDDPFTEKL---------------MSFEQGGTEFIPVKVGRAVLQSMNRHEVFIKRWPQPL---KFNYYKSIMPDVAITLCQTCNRMFHSEDYDLLVLQKGHCPFCR 735 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13533.2496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13533.2496.1 >prot_H-elongata_contig13533.2496.1 ID=prot_H-elongata_contig13533.2496.1|Name=mRNA_H-elongata_contig13533.2496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=477bp MDDTANVLALYVRSQNWSEAVKLSQEHKGTFNDIVFLPYALWLGDQGRFDback to top mRNA from alignment at H-elongata_contig13533:925..8009- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13533.2496.1 ID=mRNA_H-elongata_contig13533.2496.1|Name=mRNA_H-elongata_contig13533.2496.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7085bp|location=Sequence derived from alignment at H-elongata_contig13533:925..8009- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13533:925..8009- >mRNA_H-elongata_contig13533.2496.1 ID=mRNA_H-elongata_contig13533.2496.1|Name=mRNA_H-elongata_contig13533.2496.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2862bp|location=Sequence derived from alignment at H-elongata_contig13533:925..8009- (Himanthalia elongata Himel1 dioecious)back to top |