mRNA_H-elongata_contig13521.2486.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: T1G7Q5_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G7Q5_HELRO) HSP 1 Score: 81.3 bits (199), Expect = 1.560e-18 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 1 LNSALEPSIDAGSNALIRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
L+ L+ I A ++ +WWA N ++P I VAR LA PA S PSE++FS SG I E+RNRL PEH+EQL+FL
Sbjct: 5 LDCFLQEQIIAPEESVYKWWADNASRFPTIAKVARKYLAIPATSVPSEQIFSMSGQIMNERRNRLKPEHVEQLVFL 80
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: T1EL11_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EL11_HELRO) HSP 1 Score: 68.6 bits (166), Expect = 7.610e-14 Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 67 NELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
N ++P I VAR LA PA SAPSE++FS SG I E+RNRL PEH+EQL+FL
Sbjct: 1 NASRFPTIAKVARKYLAIPATSAPSEQIFSMSGQIINERRNRLKPEHVEQLVFL 54
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: A0A0A1WDS8_ZEUCU (Transposable element Hobo transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WDS8_ZEUCU) HSP 1 Score: 70.5 bits (171), Expect = 1.350e-13 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 46 LIRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
+++WW NE +YPL+ VA L PA SAP+ER+FS +G + EKRNRL P ++ L+FL
Sbjct: 81 VLKWWGVNENRYPLLSKVALKFLTIPASSAPAERVFSLAGNVITEKRNRLGPTSVDNLLFL 141
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: UPI000D626C40 (zinc finger BED domain-containing protein 1-like n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000D626C40) HSP 1 Score: 69.7 bits (169), Expect = 3.420e-12 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 16 EPSIDAGSNALIRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
+P ID N + R+W+ YPL+ +A++ LA S PSERLFS++G I + RNRL+PEHL+QL+FL
Sbjct: 339 QPMIDRRDNPM-RYWSNLASVYPLLSVIAKNYLAIVGTSVPSERLFSRAGNILTDSRNRLSPEHLQQLLFL 408
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU) HSP 1 Score: 66.6 bits (161), Expect = 4.900e-12 Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 46 LIRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
+++WW N +YP + +A VLA PA SA SER+FS +G I EKRNR+AP+ ++ ++FL
Sbjct: 91 VMQWWLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRNRIAPKTVDSILFL 151
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: UPI0017474072 (zinc finger BED domain-containing protein 4-like n=1 Tax=Monomorium pharaonis TaxID=307658 RepID=UPI0017474072) HSP 1 Score: 67.8 bits (164), Expect = 8.320e-12 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 16 EPSIDAGSNALIRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
+P N + W+ ++ YP + VAR L A S PSERLFS++G I E+RNRL+P+HL+QL+FL
Sbjct: 181 QPLAKLKENPMFYWFKKYKMIYPTLSKVARKYLFMVATSVPSERLFSRAGNILTEERNRLSPDHLQQLLFL 251
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA) HSP 1 Score: 64.7 bits (156), Expect = 8.320e-12 Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 55 WWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
WW ++E KYPL+ VA+ L+ PA S SER FS +G + KRN LAPE++ L+FL
Sbjct: 40 WWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFL 97
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: UPI001955CDF1 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955CDF1) HSP 1 Score: 68.2 bits (165), Expect = 1.250e-11 Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 49 IRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
++WW NE K+P + VA+S LA PA+S PSERLFS +G I +KR L EH++ L FL
Sbjct: 531 LQWWKENETKFPTLAVVAKSYLAAPAISTPSERLFSAAGTIVSKKRASLTKEHVDMLTFL 590
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: A0A7J5XUC7_DISMA (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Nototheniidae TaxID=8206 RepID=A0A7J5XUC7_DISMA) HSP 1 Score: 67.4 bits (163), Expect = 2.280e-11 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 49 IRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
++WW NE K+P + VARS LA PA S PSERLFS +G I +KR L EH++ L FL
Sbjct: 382 LQWWNENETKFPSLAVVARSYLAAPATSTPSERLFSAAGTIVSKKRASLTKEHVDMLTFL 441
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Match: A0A6P8TVQ2_GYMAC (zinc finger BED domain-containing protein 1-like n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8TVQ2_GYMAC) HSP 1 Score: 67.4 bits (163), Expect = 2.340e-11 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 49 IRWWAANELKYPLIDSVARSVLAFPALSAPSERLFSQSGMIACEKRNRLAPEHLEQLMFL 228
++WW NE K+P + VARS LA PA S PSERLFS +G I +KR L EH++ L FL
Sbjct: 541 LQWWKENETKFPSLAVVARSYLAAPATSTPSERLFSAAGNIVSKKRASLTKEHVDMLTFL 600 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13521.2486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13521.2486.1 >prot_H-elongata_contig13521.2486.1 ID=prot_H-elongata_contig13521.2486.1|Name=mRNA_H-elongata_contig13521.2486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp LNSALEPSIDAGSNALIRWWAANELKYPLIDSVARSVLAFPALSAPSERLback to top mRNA from alignment at H-elongata_contig13521:2975..3202- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13521.2486.1 ID=mRNA_H-elongata_contig13521.2486.1|Name=mRNA_H-elongata_contig13521.2486.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=228bp|location=Sequence derived from alignment at H-elongata_contig13521:2975..3202- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13521:2975..3202- >mRNA_H-elongata_contig13521.2486.1 ID=mRNA_H-elongata_contig13521.2486.1|Name=mRNA_H-elongata_contig13521.2486.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at H-elongata_contig13521:2975..3202- (Himanthalia elongata Himel1 dioecious)back to top |