mRNA_H-elongata_contig135195.2485.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI) HSP 1 Score: 249 bits (637), Expect = 2.810e-74 Identity = 115/131 (87.79%), Postives = 125/131 (95.42%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+LNAQGRARPEIAALYNWRYK+LGNL LVQT+PQYLTAN GF YDYQM+DVPDFEGRGETTPT+FFYQNLGEAEYVVA +QYMRLLGYPA +ISILTTYNGQCQLIEDVV+QRC+NN+LFG PGRIATVDK
Sbjct: 1814 QLNAQGRARPEIAALYNWRYKDLGNLALVQTKPQYLTANAGFGYDYQMIDVPDFEGRGETTPTAFFYQNLGEAEYVVATYQYMRLLGYPASKISILTTYNGQCQLIEDVVKQRCANNDLFGEPGRIATVDK 1944
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A368G8L0_ANCCA (Uncharacterized protein n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368G8L0_ANCCA) HSP 1 Score: 196 bits (498), Expect = 1.640e-58 Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+L+ QGRAR EIA LY+WRYK+LGNLP V+ PQ+ TAN GFA+++Q++DVPDF G+GE+ P+ ++YQNLGEAEY VA+F YMR+LGYPAD+ISI+TTYNGQ QLI DVV +RC+NN L G P +I+TVDK
Sbjct: 142 QLDKQGRARSEIATLYSWRYKDLGNLPHVEALPQFQTANAGFAFNFQLIDVPDFNGQGESQPSPYYYQNLGEAEYAVALFTYMRILGYPADKISIITTYNGQAQLIRDVVARRCANNPLIGAPAKISTVDK 272
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A7S2AK93_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AK93_9DINO) HSP 1 Score: 189 bits (481), Expect = 1.540e-57 Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 4 LNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
LN QGRARP+IA LY+WRYK+LGNL V T +Y AN G YDYQ +DV DF+G+GET PT +FYQNLGEAEY VA+F YMRL+GYPA +ISIL+TYNGQ LI DVVRQRC+ N LFG P +I TVD+
Sbjct: 50 LNLQGRARPDIADLYSWRYKDLGNLANVLTESRYRNANAGLTYDYQFIDVEDFDGKGETQPTPYFYQNLGEAEYCVALFMYMRLMGYPASKISILSTYNGQKALIRDVVRQRCAWNPLFGEPNKITTVDR 179
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A699YYD0_HAELA (AAA_12 domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YYD0_HAELA) HSP 1 Score: 188 bits (477), Expect = 1.280e-56 Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+LNAQGRARP IA LYNWRY+ LG+LP V T P +L ANPGFA+DYQ ++VPDF G+GE P +FYQNLGEAEYVV++F +MRL+GYPA +I+ILTTYNGQ LI DVV +RC+ G P +IATVDK
Sbjct: 26 ELNAQGRARPSIARLYNWRYRSLGDLPAVSTEPSFLAANPGFAFDYQFINVPDFLGKGELEPHPYFYQNLGEAEYVVSLFTFMRLMGYPASKITILTTYNGQKHLIRDVVERRCAAVPQLGRPHKIATVDK 156
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A158QKB0_HAEPC (Uncharacterized protein n=6 Tax=Strongylida TaxID=6308 RepID=A0A158QKB0_HAEPC) HSP 1 Score: 198 bits (503), Expect = 3.050e-56 Identity = 87/131 (66.41%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+L+ QGRAR EIAALY+WRYK LGNLP V+ PQ+ TAN GFA++YQ++DVPDF G+GE+ P+ ++YQNLGEAEY VA+F YMR++GYP+D+ISI+TTYNGQ QLI DVV +RC+NN L G+P +I+TVDK
Sbjct: 1132 QLDRQGRARAEIAALYSWRYKNLGNLPHVEALPQFQTANAGFAFNYQLIDVPDFNGQGESQPSPYYYQNLGEAEYAVALFTYMRIIGYPSDKISIITTYNGQAQLIRDVVERRCANNPLIGSPAKISTVDK 1262
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A2K1IRD9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IRD9_PHYPA) HSP 1 Score: 197 bits (502), Expect = 4.140e-56 Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+LN+QGRARP IA LYNWRYKELG+LP V P Y AN GF+Y+YQ+V+V D+EG GET P +FYQNLGEAEYVV+VF YMRLLGYPA++ISILTTYNGQ QLI DV+ ++CSNN LFG P ++ TVDK
Sbjct: 1147 QLNSQGRARPSIAKLYNWRYKELGDLPNVLQDPAYHLANAGFSYEYQLVNVEDYEGFGETEPVQYFYQNLGEAEYVVSVFMYMRLLGYPAEKISILTTYNGQKQLIRDVIARKCSNNPLFGRPSKVTTVDK 1277
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A0C2GK18_9BILA (Uncharacterized protein n=2 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2GK18_9BILA) HSP 1 Score: 196 bits (498), Expect = 5.090e-56 Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+L+ QGRAR EIA LY+WRYK+LGNLP V+ PQ+ TAN GFA+++Q++DVPDF G+GE+ P+ ++YQNLGEAEY VA+F YMR+LGYPAD+ISI+TTYNGQ QLI DVV +RC+NN L G P +I+TVDK
Sbjct: 449 QLDKQGRARSEIATLYSWRYKDLGNLPHVEALPQFQTANAGFAFNFQLIDVPDFNGQGESQPSPYYYQNLGEAEYAVALFTYMRILGYPADKISIITTYNGQAQLIRDVVARRCANNPLIGAPAKISTVDK 579
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A812XT32_9DINO (Aqr protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812XT32_9DINO) HSP 1 Score: 184 bits (467), Expect = 9.870e-56 Identity = 89/130 (68.46%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 4 LNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
LN QGRARP IA LY+WRYK+LGNLP V T +Y ANPG Y YQ V+V DFEGRGE+ PT +FYQNLGEAEY VA+F YMRL G PA +ISIL+TYNGQ L+ DVVR RCS N LFG P +I TVDK
Sbjct: 42 LNLQGRARPSIAELYSWRYKDLGNLPNVLTDDRYRYANPGLTYVYQFVNVEDFEGRGESQPTPYFYQNLGEAEYCVALFMYMRLCGIPAHKISILSTYNGQKALLRDVVRTRCSWNPLFGEPAKITTVDK 171
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: A0A1Y1YIH7_9FUNG (Pre-mRNA-splicing factor n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIH7_9FUNG) HSP 1 Score: 196 bits (499), Expect = 1.040e-55 Identity = 90/130 (69.23%), Postives = 108/130 (83.08%), Query Frame = 1
Query: 4 LNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
L+AQGRARP IA L+NWRYK+LGNLP+V + +Y AN GF YDYQ+V+V +EG GET PT +FYQNLGEAEY VA+FQYMRLLGYPA++ISILTTYNGQ LIEDV+R RCS N +FG P +++TVDK
Sbjct: 1049 LDAQGRARPSIAELFNWRYKKLGNLPIVAQKQEYQLANAGFTYDYQLVNVDAYEGSGETEPTKYFYQNLGEAEYAVAIFQYMRLLGYPAEKISILTTYNGQKALIEDVLRVRCSWNPMFGKPAKVSTVDK 1178
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Match: W2TTH5_NECAM (Uncharacterized protein n=1 Tax=Necator americanus TaxID=51031 RepID=W2TTH5_NECAM) HSP 1 Score: 196 bits (498), Expect = 1.300e-55 Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 1
Query: 1 KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDVPDFEGRGETTPTSFFYQNLGEAEYVVAVFQYMRLLGYPADRISILTTYNGQCQLIEDVVRQRCSNNELFGNPGRIATVDK 393
+L+ QGRAR EIAALY+WRYK LGNLP V+ PQ+ TAN GFA++YQ++DVPDF G+GE+ P+ F+YQNLGEAEY VA+F YMR++GYPA++ISI+TTYNGQ QLI DVV +RC+NN L G P +++TVDK
Sbjct: 784 QLDKQGRARSEIAALYSWRYKNLGNLPHVEALPQFQTANAGFAFNYQLIDVPDFNGQGESQPSPFYYQNLGEAEYAVALFTYMRIIGYPAEKISIITTYNGQAQLIRDVVARRCANNPLIGVPAQVSTVDK 914 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135195.2485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig135195.2485.1 >prot_H-elongata_contig135195.2485.1 ID=prot_H-elongata_contig135195.2485.1|Name=mRNA_H-elongata_contig135195.2485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp KLNAQGRARPEIAALYNWRYKELGNLPLVQTRPQYLTANPGFAYDYQMVDback to top mRNA from alignment at H-elongata_contig135195:268..1425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig135195.2485.1 ID=mRNA_H-elongata_contig135195.2485.1|Name=mRNA_H-elongata_contig135195.2485.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1158bp|location=Sequence derived from alignment at H-elongata_contig135195:268..1425+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig135195:268..1425+ >mRNA_H-elongata_contig135195.2485.1 ID=mRNA_H-elongata_contig135195.2485.1|Name=mRNA_H-elongata_contig135195.2485.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig135195:268..1425+ (Himanthalia elongata Himel1 dioecious)back to top |