mRNA_H-elongata_contig13516.2483.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13516.2483.1
Unique NamemRNA_H-elongata_contig13516.2483.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: D7FR60_ECTSI (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR60_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.740e-118
Identity = 180/224 (80.36%), Postives = 199/224 (88.84%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKIVDQ 674
            VDWLM DG  INTSS++ GKVVV +VTGSCR+ILQGERTALN++SRCSGVAT T  AV +A+AKGWKG+VAGTRKTTPGFR+VEKYAL+VGGGATHRYDLSQMVMLKDNHIASAG IT AV  ARRAAGFS+KIEVET NY +A EAARAG D+IMLDNF+P+EL SVSR LK EFP+VILEASGGITAETFH FL D+VDVIS GALTHGY C+DFSLKIV Q
Sbjct:   69 VDWLMSDGAQINTSSSDTGKVVVAKVTGSCRHILQGERTALNVISRCSGVATATFEAVQQAKAKGWKGYVAGTRKTTPGFRLVEKYALVVGGGATHRYDLSQMVMLKDNHIASAGGITRAVEVARRAAGFSMKIEVETSNYGQAAEAARAGADIIMLDNFEPEELKSVSRRLKGEFPHVILEASGGITAETFHLFLEDSVDVISQGALTHGYNCLDFSLKIVAQ 292
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A662Y2C2_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2C2_9STRA)

HSP 1 Score: 295 bits (755), Expect = 4.130e-94
Identity = 145/221 (65.61%), Postives = 184/221 (83.26%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            VDW +R+G++++ +SA  GKVVV +VTG CRNIL GERTALNI++R SGVAT    AV+ AR  GW GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNHI +AGSIT+AV TA+RAAGFS+KIEVE    +EAVEAA+AG D++MLDNF+P++L + +  LKT+FP++++EASGGIT+ET   +L+ +VD++S G LT GY C+DFSLKI
Sbjct:   68 VDWRLREGDAVSPASAPGGKVVVAQVTGKCRNILLGERTALNILTRASGVATQAQQAVALARGLGWSGHVAGTRKTTPGFRLVEKYALLVAGASTHRHDLSQMVMLKDNHIWAAGSITSAVQTAKRAAGFSMKIEVECRRLEEAVEAAQAGADIVMLDNFEPEQLKATAAKLKTQFPHLLIEASGGITSETMGLYLSPHVDIVSQGKLTQGYPCLDFSLKI 288
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A836CJK9_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJK9_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.330e-91
Identity = 147/222 (66.22%), Postives = 175/222 (78.83%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKIV 668
            V+W  +DG+ I+ SS   GKVV+ RV GSCR++L GERTALNI+SRCSGVAT   +A  + R  GW G VAGTRKTTPGFR+VEKY L+VGG ATHR DLSQMVMLKDNHI SAGSIT AV  A+RAAGFSIK+EVE G Y+ A EAA AG DV+MLDNF+P  L   +  LK EFPNV++EASGGITA+T  QF++ +VDVIS G+LT GY C+DFSLK++
Sbjct:   78 VEWAAKDGDRIDASS---GKVVIARVKGSCRHLLIGERTALNILSRCSGVATAADDAARRGREVGWHGMVAGTRKTTPGFRLVEKYGLVVGGAATHRNDLSQMVMLKDNHIMSAGSITKAVALAKRAAGFSIKVEVEAGTYEAAHEAATAGADVVMLDNFEPAALKKAAARLKKEFPNVLIEASGGITADTMTQFMSPDVDVISRGSLTQGYACLDFSLKVL 296
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A2D4BMS8_PYTIN (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS8_PYTIN)

HSP 1 Score: 288 bits (736), Expect = 2.370e-91
Identity = 138/221 (62.44%), Postives = 180/221 (81.45%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+WL+++G+ ++ S+  +GKVVV +VTG CRNIL GERTALNI++R SG+AT   ++V  AR  GW GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ +AGSITNAV  A+RA GFS+KIEVE    +E +EAA+AG D++MLDNF P+EL   + TLK++FP++++EASGGIT +T  Q+++ +VDV+S G LT GY C+DFSLKI
Sbjct:   61 VEWLLKEGDVVDPSTTAEGKVVVAKVTGKCRNILLGERTALNILTRASGIATLAKHSVDIARGLGWHGHVAGTRKTTPGFRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITNAVHKAKRATGFSMKIEVECRKLEEGIEAAKAGADIVMLDNFTPEELKKTAATLKSQFPHLLIEASGGITPDTLAQYVSPHVDVVSQGKLTQGYPCLDFSLKI 281
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: H3G8T1_PHYRM (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Phytophthora TaxID=4783 RepID=H3G8T1_PHYRM)

HSP 1 Score: 284 bits (727), Expect = 7.180e-90
Identity = 140/221 (63.35%), Postives = 177/221 (80.09%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+WL+++GE +  S    GKV V RVTG CR +L GERTALNI++R SGVAT    +V +ARA GW+GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ +AGSITNAV  A++AAGFS+KIEVE    +EA EAA AG D++MLDNF+P++L + +  LK +FP+V++EASGGIT ET  Q+++ +VDV+S G LT GY C+DFSLKI
Sbjct:   70 VEWLLKEGEEVAPSRVSGGKVPVARVTGKCRQLLLGERTALNILTRASGVATQARRSVEQARALGWRGHVAGTRKTTPGFRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITNAVHKAKQAAGFSMKIEVECRRIEEAQEAATAGADIVMLDNFEPEQLKATAAELKKQFPHVLIEASGGITPETLGQYVSPDVDVVSQGKLTQGYPCLDFSLKI 290
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: K3X4L5_GLOUD (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X4L5_GLOUD)

HSP 1 Score: 281 bits (718), Expect = 1.730e-88
Identity = 138/221 (62.44%), Postives = 177/221 (80.09%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+WL+++G  ++ S+   GKVVV +VTG CRNIL GERTALNI++R SG+AT    +V  AR  GW+GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ +AGSIT AV  A+RAAGFS+KIEVE  + DEAVEAA AG D++MLDNF+P+ L + + TLK +FP++++EASGGIT ET   +++ +VD++S G LT GY  +DFSLKI
Sbjct:   71 VEWLLKEGSVVDPSTVASGKVVVAKVTGKCRNILMGERTALNILTRASGIATQAKASVDIARGLGWRGHVAGTRKTTPGFRVVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITGAVQKAQRAAGFSMKIEVECRSLDEAVEAATAGADIVMLDNFEPEGLKATAATLKAQFPHLLIEASGGITPETLGLYVSPHVDIVSQGKLTQGYGFLDFSLKI 291
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A3R7JF79_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JF79_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.300e-88
Identity = 136/221 (61.54%), Postives = 175/221 (79.19%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+WLM++G+ +    A +GKV V RVTG CR +L GERTALN+++R SG+AT    +V +ARA GW GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ +AGSIT AV  A++AAGFS+KIEVE    +EA EAA AG D++MLDNF+P+ L S +  LK +FP++++EASGGIT ET  Q+++ +VD++S G LT GY C+DFSLKI
Sbjct:   49 VEWLMQEGDEVKIDEAPNGKVPVARVTGKCRQLLLGERTALNVLTRASGIATQARRSVDEARALGWNGHVAGTRKTTPGFRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITKAVHKAKQAAGFSMKIEVECRRLEEAQEAATAGADIVMLDNFEPELLKSTAAELKAQFPHLLIEASGGITPETLGQYVSPHVDIVSQGKLTQGYPCLDFSLKI 269
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A485L8X5_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L8X5_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.310e-87
Identity = 138/221 (62.44%), Postives = 174/221 (78.73%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+W + +G +I+ ++   GKVVV +VTG CRNIL GERTALNI++R SG+AT    AV  AR  GW GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ ++GSITNAV  A+ AAGFS+KIEVE    +EA+EAA AG D++MLDNF+P +L  V+  LK +FP++++EASGGIT ET  Q+++ +VDVIS G LT GY  +DFSLKI
Sbjct:   68 VEWQLHEGAAIDPATVPSGKVVVAKVTGKCRNILLGERTALNILTRASGIATQAKAAVQVARGLGWHGHVAGTRKTTPGFRVVEKYALLVAGASTHRHDLSQMVMLKDNHVWASGSITNAVKKAKTAAGFSMKIEVECRKLEEAIEAATAGADIVMLDNFEPPQLKEVAAKLKQQFPHLLIEASGGITIETMGQYVSPHVDVISQGKLTQGYSFLDFSLKI 288
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A5D6YCH1_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCH1_9STRA)

HSP 1 Score: 277 bits (709), Expect = 4.430e-87
Identity = 139/221 (62.90%), Postives = 176/221 (79.64%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+WL+++G  ++ SS E GKVVV +VTG CRNIL GERTALNI++R SG+AT  S  V  ARA GW GHVAGTRKTTPGFR+VEKYALLV G +THR+DLSQMVMLKDNH+ +AGSIT AV  A+   GFS+KIEVE  ++DEAVEAA AG D++MLDNF+P+ L + ++ LKT+FP++++EASGGIT  T   +++ +VD++S G LT GY  VDFSLKI
Sbjct:   78 VEWLLKEGSVVDPSSVESGKVVVAKVTGKCRNILLGERTALNILTRASGIATQAS--VDIARALGWSGHVAGTRKTTPGFRLVEKYALLVAGASTHRHDLSQMVMLKDNHVWAAGSITGAVHKAKLVTGFSMKIEVECRSFDEAVEAATAGADIVMLDNFEPEGLKATAKRLKTQFPHLLIEASGGITPATLGSYVSPDVDIVSQGKLTQGYGFVDFSLKI 296
[Close]
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Match: A0A3L6UX08_9STRA (Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UX08_9STRA)

HSP 1 Score: 275 bits (703), Expect = 9.220e-87
Identity = 139/221 (62.90%), Postives = 173/221 (78.28%), Query Frame = 3 
Query:    3 VDWLMRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTTSNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMVMLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDVIMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVISLGALTHGYKCVDFSLKI 665
            V+W + +G  I+ S+   GKVVV +V+G CRNIL GERTALNI++R SG+AT  S AV  AR  GW GHVAGTRKTTPGFR+VEKYALLV G +THR DLSQMVMLKDNH+ ++GSITNAV  A+ AAGFS+KIEVE    +EAVEAA AG D++MLDNF+P +L  V+ TLK +FP++++EASGGIT +T   +++ +VD+IS G LT GY  VDFSLKI
Sbjct:   35 VEWQVPEGSVIDPSTVASGKVVVAKVSGKCRNILLGERTALNILTRASGIATQASAAVKVARGLGWHGHVAGTRKTTPGFRVVEKYALLVAGASTHRNDLSQMVMLKDNHVWASGSITNAVKKAKTAAGFSMKIEVECRKLEEAVEAAHAGADIVMLDNFEPPQLKQVAATLKQQFPHLLIEASGGITIDTMGDYVSPHVDIISQGKLTQGYGFVDFSLKI 255
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13516.2483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR60_ECTSI1.740e-11880.36Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A662Y2C2_9STRA4.130e-9465.61Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A836CJK9_9STRA2.330e-9166.22Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A2D4BMS8_PYTIN2.370e-9162.44Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
H3G8T1_PHYRM7.180e-9063.35Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
K3X4L5_GLOUD1.730e-8862.44Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A3R7JF79_9STRA2.300e-8861.54Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A485L8X5_9STRA3.310e-8762.44Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A5D6YCH1_9STRA4.430e-8762.90Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]
A0A3L6UX08_9STRA9.220e-8762.90Nicotinate-nucleotide pyrophosphorylase [carboxyla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13516contigH-elongata_contig13516:171..3010 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue5.8e-94
Seed eggNOG ortholog2880.D7FR60
Preferred nameQPRT
KEGG rclassRC00002,RC00043,RC00684,RC02877
KEGG koko:K00767,ko:K00927,ko:K12659
KEGG ReactionR01512,R02649,R03348,R03443
KEGG Pathwayko00010,ko00220,ko00710,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00010,map00220,map00710,map00760,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00001,M00002,M00003,M00028,M00115,M00165,M00166,M00308,M00552
GOsGO:0003674,GO:0003824,GO:0004514,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009072,GO:0009108,GO:0009117,GO:0009165,GO:0009308,GO:0009435,GO:0009987,GO:0016043,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0022607,GO:0034213,GO:0034354,GO:0034627,GO:0034641,GO:0034654,GO:0042430,GO:0042737,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043649,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0046983,GO:0051186,GO:0051188,GO:0051259,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605
EggNOG free text desc.quinolinate catabolic process
EggNOG OGsCOG0157@1,KOG3008@2759
EC1.2.1.38,2.4.2.19,2.7.2.3,2.7.2.8
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionQuinolinate phosphoribosyl transferase, N-terminal
Ec32 orthologEc-09_003390.1
Exons3
Model size1374
Cds size684
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13516.2483.1prot_H-elongata_contig13516.2483.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13516 847..2996 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929802.3363194-UTR-H-elongata_contig13516:170..8461622929802.3363194-UTR-H-elongata_contig13516:170..846Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13516 171..846 -
1691679163.0499113-UTR-H-elongata_contig13516:170..8461691679163.0499113-UTR-H-elongata_contig13516:170..846Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13516 171..846 -
1622929802.403969-UTR-H-elongata_contig13516:2996..30101622929802.403969-UTR-H-elongata_contig13516:2996..3010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13516 2997..3010 -
1691679163.1042469-UTR-H-elongata_contig13516:2996..30101691679163.1042469-UTR-H-elongata_contig13516:2996..3010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13516 2997..3010 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929802.3603187-CDS-H-elongata_contig13516:846..11371622929802.3603187-CDS-H-elongata_contig13516:846..1137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 847..1137 -
1691679163.0680523-CDS-H-elongata_contig13516:846..11371691679163.0680523-CDS-H-elongata_contig13516:846..1137Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 847..1137 -
1622929802.3782256-CDS-H-elongata_contig13516:1769..19391622929802.3782256-CDS-H-elongata_contig13516:1769..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 1770..1939 -
1691679163.0843747-CDS-H-elongata_contig13516:1769..19391691679163.0843747-CDS-H-elongata_contig13516:1769..1939Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 1770..1939 -
1622929802.3923674-CDS-H-elongata_contig13516:2773..29961622929802.3923674-CDS-H-elongata_contig13516:2773..2996Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 2774..2996 -
1691679163.0940936-CDS-H-elongata_contig13516:2773..29961691679163.0940936-CDS-H-elongata_contig13516:2773..2996Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13516 2774..2996 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13516.2483.1

>prot_H-elongata_contig13516.2483.1 ID=prot_H-elongata_contig13516.2483.1|Name=mRNA_H-elongata_contig13516.2483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
MRDGESINTSSAEDGKVVVCRVTGSCRNILQGERTALNIVSRCSGVATTT
SNAVSKARAKGWKGHVAGTRKTTPGFRIVEKYALLVGGGATHRYDLSQMV
MLKDNHIASAGSITNAVTTARRAAGFSIKIEVETGNYDEAVEAARAGTDV
IMLDNFKPDELHSVSRTLKTEFPNVILEASGGITAETFHQFLNDNVDVIS
LGALTHGYKCVDFSLKIVDQRDRKTTR*
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mRNA from alignment at H-elongata_contig13516:171..3010-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13516.2483.1 ID=mRNA_H-elongata_contig13516.2483.1|Name=mRNA_H-elongata_contig13516.2483.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2840bp|location=Sequence derived from alignment at H-elongata_contig13516:171..3010- (Himanthalia elongata Himel1 dioecious)
AGGTGGACTGGCTCATGCGCGACGGGGAGAGCATCAACACGAGCTCAGCG
GAGGATGGGAAGGTTGTGGTATGCCGAGTGACTGGGAGCTGTCGGAACAT
CCTTCAGGGGGAAAGAACGGCCCTGAACATCGTATCTCGCTGCAGCGGTG
TTGCTACTACAACCTCAAATGCTGTCAGTAAAGCCAGGGCGAAAGGGTGG
AAAGGACACGTCGCCGGGACACGAAAAACCACTCCAGGTGATAGTCTGCG
CAGTTTTAGTGGAGGCCATTACTCGTCGTTTTGGGGACCAACGAAGCCAC
TCTGTGATTAACTCTAGTGAAAATGCATTTGAATTGCACACCAGTATCGG
TCTGCTAAGGGGTACAGTACTGCATTCTGCACAAGGGGATGGGGTTGCTA
CACATTCTATCGCTACCGTTTGAAACAAGGAGTGATACTCCAGGGGGGTT
TTCCTTACGTTGAGCTGAGCTGAGATATTATCGCACATATTATCAGCGCA
GAGACGAAATATGTGTAATAATAGGAAAAAGGAAAGACTGATGTCGTGTC
GTGTCGTGTGACTTTTACCATCATCTTTTACTACAGTAAGATAGACTATT
GACTATTTCGTGGCATGTCTTTCTTCTACAGCTATTGACTATAACTGCTG
GCTCGTAAATCTTAGGTAAAAGAAAGACGGCCTCGTCAAAACTATGAGGT
AGAAGAAGTCGATCTGGATGTACGAGGTATTCACTATAAGTGTATTGTAC
AGTATTATTAGAAAAGTTCTTATGCTCCTACAACGCCGATGTACTCGATA
TTATTAAGATGTACGTAGGCATGGAGCATTCCCATCCAAAGTTGACACAT
TCACATTCTTCGAGTATCAAAATTTTGCTCATGATTTGGTGACGTTGATC
GTGCGCTGTGTGACGTCAAGGAAGGTATTTGCTAAACAGCTGTACAAACG
TATGCAAGTTTGGAGGCGCACTTCCATTTTTTTGAGTCTGCAACGCGGTG
CTTGCCGAAAACAGTTATGGCATGATATTGTAAATGAGTTCATCGTGTGC
ACATCCCATGTCTGTCAACAGGATTCAGAATCGTGGAAAAATATGCTCTC
CTTGTGGGGGGAGGTGCAACCCATAGGTACGACCTAAGCCAAATGGTGAT
GTTGAAGGACAATCACATCGCTAGCGCTGGAAGTATCACAAACGCCGTGA
CTACCGCCCGACGAGCGGCTGGATTTTCCATAAAAATCGAGGTGAAACAG
AGTCTACCGCACATTCCAGGATCCCACCCTCAGCTCCAGCCTTATTGATA
CCTTGATACCTTGTTTTTGATATAAAGGGCAATTTATTTTGTTTGATCTT
ATATTCTGCGGATGGAACAATTTAACGTGCATGGTTACCAATTTAATCCT
CTGCATCGCTCCCTATCCCGATTGTGGTCCTTAGGGATCAGTCTATCTTT
TCCCAATTCGCGCCTAGGCCTTTTTATCAAGATACAAGGTATAACTCCCA
GACTTCAGCTAATTGTTCAACTTGCTTGTGCTCTTAACCTTTCATCTACA
GCAGTGTATCTCGAGATTGGAACTGAAGACTGTACGACTGCTCTAACAGC
TGAACCACCCAGTGTGCCCAACCTCAACCATGGAATCAGACCTCGTCCGT
TTGTGAACAACCTTCCCTTGCTCCAAAATGCTGTCAAATCCCGCCGGGTT
CACTTGATGAAGCTTTACAAGGCTTTTCCTCGCATTCGATTAAGAGGCGC
AATCAATAGGAAATATAAAAGTTTTCCTTATCGGGTTCGCTTCAATAATT
ACACAATTCCATCGTTCACCCGGTCCTTACCCAATTCCTTACCCAATTCC
ATCGTTTACCCGGTCCTTACCAGGTAGAAACGGGTAACTACGATGAAGCT
GTTGAAGCGGCGAGGGCAGGCACCGACGTTATTATGCTCGACAATTTCAA
GCCAGACGAACTTCACTCCGTTTCGCGAACTCTGAAAACCGAGTTTCCGA
ATGTTATTCTGGAAGCAAGCGGAGGAATCACTGCAGAAACATTTCATCAA
TTCTTGAATGACAACGTCGACGTTATTAGCCTAGGCGCACTGACCCACGG
ATATAAATGTGTCGATTTTTCCCTGAAGATCGTCGACCAAAGAGACCGCA
AGACCACGCGTTAATAGAGGTTGATGAAATATGCACATGCCACATTTACG
TATTTCTGGTCTGGATTCAGTTGTGGTCAGGTGCGTCACGGAATTCGTGC
AGATAATTCACCCAATCGCCAAAATTATGTTTAAAAATATATGCTCTCGT
ACAAACTGAGGAGATATTTAGTCGAACGTTTACCTGGTGCGCCGTCCCTC
CAGTTGTCCCCATGAGTGCATCATGTCACGAATAATTTTAGCATCGGCTG
CATTATTCCATCATTCCATCATGTCACCGAACGATTTTATTTACCGTGGT
TTCCAGAAGTCGAAAGTCTTCATTATTTGGCTCGCTAGGCCATAGTCATT
GTTCTGGTTGTGTCCAGGCGGGTAGGTGAGAAGTTCGGGGACAGGACGGG
CTTTGTAAACTCAAAAATGGCTCGGGAAATACATTCAGGTGGGGTGGTGC
TGGATATTCTGGCTTCTAGTTGGTGATGGGACGGGATCTGATTACTCGAT
GCCGCGTAGCGGTATGGCACCGATGCAGATCCCAAGTGCATGAGTTTGAT
TGAGGTTCCATATGACTGCATTCAGACGATGCCGGAGTGGTCTCGCAATC
GCCAGAGCAGCTCAGGAAGATGATGATGGTGTTGTTGTTGTTGTTTTGTT
GTTTCTCACATTTAGCGCATTGGTTGCCAACCCGAAAAAA
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Coding sequence (CDS) from alignment at H-elongata_contig13516:171..3010-

>mRNA_H-elongata_contig13516.2483.1 ID=mRNA_H-elongata_contig13516.2483.1|Name=mRNA_H-elongata_contig13516.2483.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1368bp|location=Sequence derived from alignment at H-elongata_contig13516:171..3010- (Himanthalia elongata Himel1 dioecious)
ATGCGCGACGGGGAGAGCATCAACACGAGCTCAGCGGAGGATGGGAAGGT
TGTGGTATGCCGAGTGACTGGGAGCTGTCGGAACATCCTTCAGGGGGAAA
GAACGGCCCTGAACATCGTATCTCGCTGCAGCGGTGTTGCTACTACAACC
TCAAATGCTGTCAGTAAAGCCAGGGCGAAAGGGTGGAAAGGACACGTCGC
CGGGACACGAAAAACCACTCCAGATGCGCGACGGGGAGAGCATCAACACG
AGCTCAGCGGAGGATGGGAAGGTTGTGGTATGCCGAGTGACTGGGAGCTG
TCGGAACATCCTTCAGGGGGAAAGAACGGCCCTGAACATCGTATCTCGCT
GCAGCGGTGTTGCTACTACAACCTCAAATGCTGTCAGTAAAGCCAGGGCG
AAAGGGTGGAAAGGACACGTCGCCGGGACACGAAAAACCACTCCAGGATT
CAGAATCGTGGAAAAATATGCTCTCCTTGTGGGGGGAGGTGCAACCCATA
GGTACGACCTAAGCCAAATGGTGATGTTGAAGGACAATCACATCGCTAGC
GCTGGAAGTATCACAAACGCCGTGACTACCGCCCGACGAGCGGCTGGATT
TTCCATAAAAATCGAGGATTCAGAATCGTGGAAAAATATGCTCTCCTTGT
GGGGGGAGGTGCAACCCATAGGTACGACCTAAGCCAAATGGTGATGTTGA
AGGACAATCACATCGCTAGCGCTGGAAGTATCACAAACGCCGTGACTACC
GCCCGACGAGCGGCTGGATTTTCCATAAAAATCGAGGTAGAAACGGGTAA
CTACGATGAAGCTGTTGAAGCGGCGAGGGCAGGCACCGACGTTATTATGC
TCGACAATTTCAAGCCAGACGAACTTCACTCCGTTTCGCGAACTCTGAAA
ACCGAGTTTCCGAATGTTATTCTGGAAGCAAGCGGAGGAATCACTGCAGA
AACATTTCATCAATTCTTGAATGACAACGTCGACGTTATTAGCCTAGGCG
CACTGACCCACGGATATAAATGTGTCGATTTTTCCCTGAAGATCGTCGAC
CAAAGAGACCGCAAGACCACGCGTTAAGTAGAAACGGGTAACTACGATGA
AGCTGTTGAAGCGGCGAGGGCAGGCACCGACGTTATTATGCTCGACAATT
TCAAGCCAGACGAACTTCACTCCGTTTCGCGAACTCTGAAAACCGAGTTT
CCGAATGTTATTCTGGAAGCAAGCGGAGGAATCACTGCAGAAACATTTCA
TCAATTCTTGAATGACAACGTCGACGTTATTAGCCTAGGCGCACTGACCC
ACGGATATAAATGTGTCGATTTTTCCCTGAAGATCGTCGACCAAAGAGAC
CGCAAGACCACGCGTTAA
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