mRNA_H-elongata_contig134773.2460.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A6H5L511_9PHAE (LMWPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L511_9PHAE) HSP 1 Score: 203 bits (516), Expect = 1.950e-63 Identity = 95/136 (69.85%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAAKTRTMTSYCRSSRGVKSVPDPYYGGPQ 408
RSPTAEAVFKQVTS+AGD++ F IDSCGTGGG+ WY +GG+S+H GD PD RMTAAAAKRGV L+GASRP+ P D + FDL++GMD N++ ++TAA+HWGKS A +K RT+TSYCRSS VKSVPDPYYGGPQ
Sbjct: 92 RSPTAEAVFKQVTSKAGDADKFEIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAAKRGVMLSGASRPLTPGDFDKFDLVVGMDEANTKAMSTAAEHWGKSQEAISKLRTITSYCRSSGDVKSVPDPYYGGPQ 227
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A835ZBG2_9STRA (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA) HSP 1 Score: 179 bits (455), Expect = 6.640e-55 Identity = 84/136 (61.76%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAAKTRTMTSYCRSSRGVKSVPDPYYGGPQ 408
RSP+AEAVF+ V +A ++ FVIDSCGTGGG WY DGG+S+HEGDP D RMT AAA+RGV L SRPMRP+DL++FDLIIGMD N + + AA +WGK +LA AK R MTSYC + +VPDPYYGGP+
Sbjct: 45 RSPSAEAVFRSVVEKAEKADNFVIDSCGTGGGMRGWYRDGGRSYHEGDPADARMTEAAAQRGVHLTSISRPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKELAEAKLRNMTSYCTKHKSA-TVPDPYYGGPE 179
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A7S2XZB6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB6_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.410e-49 Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAAKTRTMTSYCRSSRGVKSVPDPYYGGPQ 408
RSPTAEAVF + AG + F I+SCGTGGGS DWY+ G S+HEG+ PD RMTAAA+ RG+ L GASRP+ P DL+ FD II MD N + I AA +WGKS AA KT+ MTSYC+ +KSVPDPYYGG Q
Sbjct: 72 RSPTAEAVFDKKVQDAGRQDQFFIESCGTGGGSADWYMQSGFSYHEGESPDRRMTAAASNRGITLCGASRPLTPEDLDIFDYIIAMDGSNKQAITEAASYWGKSAQAAQKTKMMTSYCKKF-DMKSVPDPYYGGAQ 206
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A7J7PI14_9CHLO (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PI14_9CHLO) HSP 1 Score: 156 bits (394), Expect = 5.960e-45 Identity = 78/142 (54.93%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDL-------AAAKTRTMTSYCRSSRGVKSVPDPYYGGP 405
RSPTAEA+F+ V +AG + F IDSCGTGGGS +WYL GG S+HEGD D RMTAAA KRGV L SRP++P+DL+ FD IIGMD N I AA +W + D +KT MT YC ++ VPDPYYGGP
Sbjct: 85 RSPTAEAMFRSVVEKAGLANQFDIDSCGTGGGSSNWYLPGGFSYHEGDESDSRMTAAAVKRGVRLTSTSRPLQPSDLKRFDYIIGMDPRNVRDILKAASYWAEQDQQLPRLDEVRSKTSLMTRYCSKAKAADEVPDPYYGGP 226
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A2P6VF53_9CHLO (Tyrosine phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF53_9CHLO) HSP 1 Score: 153 bits (387), Expect = 9.500e-45 Identity = 82/143 (57.34%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAA-------KTRTMTSYCRSSRGVK--SVPDPYYGG 402
RSP+AEAVFK V +AG S F IDSCGTGGGS +WYL GG S+HEGDP DGRMTA A RGV L SRP+RP+DLE+FD I+GMDA N I AA+HW + A K MT + RS + K VPDPYYGG
Sbjct: 21 RSPSAEAVFKDVVEKAGVSGQFEIDSCGTGGGSSNWYLPGGFSYHEGDPADGRMTATARTRGVTLTSRSRPLRPSDLEEFDYIVGMDAANLAAIRRAAEHWRGAGGGGAVPPDYGSKLSLMTDFLRSQQFAKFNEVPDPYYGG 163
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A7J7PNS1_9CHLO (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PNS1_9CHLO) HSP 1 Score: 156 bits (394), Expect = 1.350e-44 Identity = 78/142 (54.93%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDL-------AAAKTRTMTSYCRSSRGVKSVPDPYYGGP 405
RSPTAEA+F+ V +AG + F IDSCGTGGGS +WYL GG S+HEGD D RMTAAA KRGV L SRP++P+DL+ FD IIGMD N I AA +W + D +KT MT YC ++ VPDPYYGGP
Sbjct: 80 RSPTAEAMFRSVVEKAGLANQFDIDSCGTGGGSSNWYLPGGFSYHEGDESDSRMTAAAVKRGVRLTSTSRPLQPSDLKRFDYIIGMDPRNVRDILKAASYWAEQDQQLPRLDEVRSKTSLMTRYCSKAKAADEVPDPYYGGP 221
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A2V0PHL2_9CHLO (Tyrosine phosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHL2_9CHLO) HSP 1 Score: 149 bits (376), Expect = 5.420e-43 Identity = 79/144 (54.86%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHW---GKSDL-----AAAKTRTMTSYCRSSRGVKSVPDPYYGGPQ 408
RSPTAEA+F+ V R G + F IDSCGTGGG+ WY GG S+HEGDP D RMTAAAA RGV L SRP+ P D F I+GMD N I TAA W G +D+ A + MTSYC + GV VPDPYYGGPQ
Sbjct: 28 RSPTAEAMFRAVVEREGVAGAFDIDSCGTGGGASGWYKPGGFSYHEGDPADPRMTAAAAGRGVRLTSRSRPLAPADFGRFKYIVGMDGANVRAILTAADFWAANGSADVPPAEEARGQVSLMTSYCTETEGVTEVPDPYYGGPQ 171
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A150FV14_GONPE (LMWPc domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FV14_GONPE) HSP 1 Score: 148 bits (374), Expect = 6.400e-43 Identity = 78/143 (54.55%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 4 SPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHW-----GKSDLAA---AKTRTMTSYCRSSRGVKSVPDPYYGGPQ 408
SPTAEAVF+ V +AG + F IDSCGTGGGS DW+ +GG S+HEGD D RMT A KRGV L SRP++P DL FD IIGMDA N I TAA +W G+ + A + MTSYC +G VPDPYYGGP+
Sbjct: 13 SPTAEAVFRSVVEKAGLAAAFDIDSCGTGGGSPDWFTEGGWSYHEGDFADSRMTITARKRGVMLTSRSRPLQPLDLSRFDYIIGMDAKNLRAIRTAADYWLVRPMGQGKVPADYAGRISLMTSYCDKFKGAPEVPDPYYGGPE 155
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A835XEG1_9CHLO (LMWPc domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XEG1_9CHLO) HSP 1 Score: 148 bits (373), Expect = 1.730e-42 Identity = 76/143 (53.15%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAAKTRT--------MTSYCRSSRGVKSVPDPYYGGP 405
RSPTAEA+F+ V +AG F IDSCGTGGGS DW+ +GG S+HEGD D RMT A KRGV L SRP++P DL FD +IGMD N + I TAA +W + A K T MT YC +G VPDPYYGGP
Sbjct: 34 RSPTAEAMFRSVVQKAGLEASFDIDSCGTGGGSPDWFTEGGWSYHEGDTADSRMTVTARKRGVILTSRSRPLQPLDLSRFDYVIGMDPNNLKAIRTAADYWLVRPMGAGKVPTDYARRVSLMTQYCAKFKGQPEVPDPYYGGP 176
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Match: A0A061R5H5_9CHLO (Protein-tyrosine phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5H5_9CHLO) HSP 1 Score: 149 bits (376), Expect = 3.320e-42 Identity = 75/141 (53.19%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 1 RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPDGRMTAAAAKRGVELAGASRPMRPNDLEDFDLIIGMDAMNSEYIATAAKHWGKSDLAAAKT-----RTMTSYCRSSRGVKSVPDPYYGGPQ 408
RSPTAEAV V AG FV+DSCGTGGG+ +WY +GG S+HEG+ D RMT AA+RGV L SRP++P+DL FD IIGMD+ N I AA +W K +TMTSYCR +G VPDPYYGG Q
Sbjct: 96 RSPTAEAVLTAVVKEAGLESRFVVDSCGTGGGNPNWYKEGGWSYHEGEDADPRMTEVAARRGVHLTSKSRPLKPDDLNRFDYIIGMDSSNMASIQVAADYWASKGYDIPKNYRGKLKTMTSYCRKHKGETEVPDPYYGGTQ 236 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134773.2460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig134773.2460.1 >prot_H-elongata_contig134773.2460.1 ID=prot_H-elongata_contig134773.2460.1|Name=mRNA_H-elongata_contig134773.2460.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp RSPTAEAVFKQVTSRAGDSEGFVIDSCGTGGGSHDWYLDGGKSFHEGDPPback to top mRNA from alignment at H-elongata_contig134773:213..1254+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig134773.2460.1 ID=mRNA_H-elongata_contig134773.2460.1|Name=mRNA_H-elongata_contig134773.2460.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1042bp|location=Sequence derived from alignment at H-elongata_contig134773:213..1254+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig134773:213..1254+ >mRNA_H-elongata_contig134773.2460.1 ID=mRNA_H-elongata_contig134773.2460.1|Name=mRNA_H-elongata_contig134773.2460.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig134773:213..1254+ (Himanthalia elongata Himel1 dioecious)back to top |