mRNA_H-elongata_contig13439.2439.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: D8LJR1_ECTSI (SUI1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR1_ECTSI) HSP 1 Score: 739 bits (1907), Expect = 2.490e-254 Identity = 401/639 (62.75%), Postives = 464/639 (72.61%), Query Frame = 1
Query: 1 QDGIEVVKLATRALVYFQVPSKTPLFFDADGRNKLFPTVYALWRMREILACGKASTAAAVERSARSEACRES---FPSLVVHPPVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGPQTLPNEAFRPQGVFRLPSEND--AAVDNAARNAKPVNDWEELTDVAVGGDIA------------PGAS----GGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLVAVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFLATGFSKGAKPRKAR 1854
+DGIEVVKLATRALVYF VP+KTPLFFD+DGRN LFPTVYALWR+ ++ + + E+ P LVVHPPVSKF+LNGADVMLP GV+ +A VDYV GERRC+MS+ NP+PYAVGEM+KDREGV++GGMTGKG+KV HCYLD+LWQMG QTLPNE FRP GV+RLPS + + + + +DWE+L+D A P A+ G DG +SLE+ G+G E + ++ ERL AFLN LKK+LKDAQLPMLVS FYSSVLLPSRPPGTSI+VKKT YRKISNFL+EME RG+VTL+V K VQSLV VNR+HP+LRAFK T+ TA A D +S++A EL+KLSHNIKKMLG+DAAS GK+GEYLTPAE RDVLF YI++EGL+HP NK+LV LNGPLCDNLYKP NKKA RVEYPTEA KAELPRRFLDRLQLHHAI+LP + HP++GRGGIP+V IEVEKRQGNRHATKVRGLEAYGIDP+ LGRQVQKR+ACST++ PAPGTNGKY ELMLQGHLA+ELEDLLS EMGIPRRFL TGFSKGAKPRKAR
Sbjct: 102 KDGIEVVKLATRALVYFHVPTKTPLFFDSDGRNNLFPTVYALWRVGQLASTTPGAXXXXXXXXXXXXXXTEAGRCCPPLVVHPPVSKFLLNGADVMLP-GVVVRDLASVDYVMGERRCVMSSGNPEPYAVGEMIKDREGVVHGGMTGKGMKVVHCYLDYLWQMGSQTLPNEGFRPDGVYRLPSAGTPISNQEELVDDGEVADDWEDLSDPAAXXXXXXXXXXXXXXXXKPAAAVEGLGLDG---------VSLEDP-MGEGEEQ---------------EQEAVEVVSERLYAAFLNGLKKSLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTSYRKISNFLQEMEGRGLVTLEVTKGVQSLVGVNRAHPDLRAFKATTVTAXXXXXXXXXXXXXXXXXXXXXXXXXXX--XAGDGETSLKAFELFKLSHNIKKMLGSDAASARGKFGEYLTPAEARDVLFGYIRAEGLDHPTNKSLVVLNGPLCDNLYKPMNKKAARVEYPTEAKKAELPRRFLDRLQLHHAILLPGNPHPFVGRGGIPSVSIEVEKRQGNRHATKVRGLEAYGIDPSTLGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLASELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 712
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A6H5KXV9_9PHAE (SUI1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV9_9PHAE) HSP 1 Score: 646 bits (1666), Expect = 5.370e-221 Identity = 349/545 (64.04%), Postives = 402/545 (73.76%), Query Frame = 1
Query: 277 MLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGPQTLPNEAFRPQGVFRLPSEND--AAVDNAARNAKPVNDWEELTDVAVGGD-----------------IAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLVAVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFLATGFSKGAKPRKAR 1854
MLP GV+ +A VDYV GERRC+MS+ NP+PYAVGEM+KDREGV++GGM GKGLKV HCYLDFLWQMGPQTLPNE FRP GV+RLPS + + + + +DWE+L+ A +A G +G +SLE++ G+G E + ++ ERL AFLN LKK LKDAQLPMLVS FYSSVLLPSRPPGTSI+VKKT YRKISNFL+EME RG+VTL+V K VQSLV VNR+HP+LRAFK TS TAAAQ A +AA A D +S++A EL+KLSHNIKKMLG+DAAS GK+GEYLTPAE RDVLF YI++EGL+HP +K+LV LNGPLCDNLYKP NKKA RVEYPTEA KAELPRRFLDRLQLHHAI+LP + HP++GRGGIP+V IEVEKRQGNRHATKVRGLEAYGIDP+ LGRQVQKR+ACST++ PAPGTNGKY ELMLQGHLA+ELEDLLS EMGIPRRFL TGFSKGAKPRKAR
Sbjct: 1 MLP-GVVVRDLASVDYVLGERRCVMSSGNPEPYAVGEMIKDREGVVHGGMIGKGLKVVHCYLDFLWQMGPQTLPNEGFRPDGVYRLPSAGAQISGQEELVDDGEVADDWEDLSHPAAAXXXXXXXXXXXXXXXXXEKLAAAVEGLEG---------VSLEDAG-GEGEEQ---------------EEEAVEVVSERLYAAFLNGLKKGLKDAQLPMLVSTFYSSVLLPSRPPGTSIDVKKTSYRKISNFLQEMEGRGLVTLKVTKGVQSLVGVNRAHPDLRAFKATSVTAAAQAAADAAEXXXXXXXXXXXXXXXXAAG---DGETSLKAFELFKLSHNIKKMLGSDAASVRGKFGEYLTPAEARDVLFGYIRAEGLDHPTDKSLVVLNGPLCDNLYKPVNKKAARVEYPTEAKKAELPRRFLDRLQLHHAILLPGNPHPFVGRGGIPSVSIEVEKRQGNRHATKVRGLEAYGIDPSTLGRQVQKRFACSTAAQPAPGTNGKYQELMLQGHLASELEDLLSEEMGIPRRFLTTGFSKGAKPRKAR 516
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A2R5GSR9_9STRA (Eukaryotic translation initiation factor 2D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSR9_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.130e-64 Identity = 189/609 (31.03%), Postives = 281/609 (46.14%), Query Frame = 1
Query: 73 LFFDADGRNK-LFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHPPVSKFVLN-GADVMLPAGV------ISGGIAKVDYV-KGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGPQTLPNEAFRPQGVFR----LPSENDAAVDNAARNAKPVN-DWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALID-ERLLHA-FLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKD--VQSLVAVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFLATGFSKGAKPR 1845
LFFD +GR L+PTV ALWR+ ++L P LVVH PVSKFV+ ADVMLP V ++G + V KG+RR + + NP P+AVGEM+ D++ + +GG GKG+ V H Y D LW +G Q PNE F + L NAK D + A + P + N+ XX P +D E LL + FL LK+ +KD +LPMLVS FYS+V+LP RP G ++N+K+T+Y+K F+ M +GI++L+ DK V++L ++R PELR FK Q A + NG A G + + + I E K S K + DA + G YLT ++RD AY+ LE N+ V L+ L + LY P K+ P + K + + +DR+Q+ H I P + G P + + E+RQG + T+ LE +G+DP + R Q +++ S ++ P PG N +E+++QG ++ +L +LS + G+ K +P+
Sbjct: 77 LFFDVNGRGDVLYPTVDALWRLPKLL------------------------PELVVHAPVSKFVVGKSADVMLPGVVREAEETVAGSCFGIGGVYKGQRRALRADGNPCPFAVGEMIVDKDNIYHGGFRGKGMVVHHRYGDQLWALGGQNRPNEGFLDAEIVATEATLSEAEXXXXXXXXXNAKAAETDXXXXSTTAEKSEATP---------------PDAPSNAXXXXXXXXXXXAISRAEDETVAPVDEPAPALDMETLLESTFLQALKRHVKDRELPMLVSQFYSNVMLPCRPQGVTLNLKQTKYKKTGVFMHAMRDKGIISLK-DKGNGVEALSEIHREAPELREFKPWPKEQEFQSAAQ-----------NGEAGAGSGETSGPNGRAEIE--ERLKPSSKAVKDVLADAKPEKAQQG-YLTGRQIRDAFLAYVTKHNLEDTTNRRFVLLDATLAEALY-PTKKRKSNESPPVKLEKGSITEKLMDRMQVGHEIRFPDGTKSKFKAGAAPKISLLEEQRQGRKFVTRAWNLEVFGLDPETIARDAQIKFSSSCTTQPRPG-NTTAIEVVIQGRVSRDLAAMLSAQHGLHEHKHFQMVDKSGRPK 629
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: UPI001929DFF7 (LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2D n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929DFF7) HSP 1 Score: 238 bits (608), Expect = 2.530e-64 Identity = 181/609 (29.72%), Postives = 292/609 (47.95%), Query Frame = 1
Query: 10 IEVVKLATRALVYFQVPSKTPLFFDADGR-NKLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHPPVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQ-MGPQTLPNEAFRPQGVFRLPSENDAAVDNAARNAKPVN---DWEELTDVA-VGGDIAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
I + K RA VY + P+FFD DGR ++++PTVYALW+ E+L C L+ VS+FV+ GAD+M P G+ ++ G+ + NP P AVG + + G+ GK L++ H Y D LW+ + +PN F V P+ A N + V D +L DV+ D+ S ++ + +S E + + G +D L L L +++KD LPM S +S+ +LP RP G ++++KK+ ++K+S +L S G+++ + DK + +V A+NR+HP+ +FK + E ++EG S S +E+YK S ++ +L + A T G+Y + +E D++F Y+++E L P +KA+V LN LCD LYK KK YPTE K +L FL+R+Q+H+ + + + +G + V I E+RQGN+ TKV GLEA+ +D +L ++QK++ACSTS PG G+Y E+++QG + +L L G+P+R++
Sbjct: 48 IVLAKYPNRAHVY-SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPC-----------------------FLLKGGEVSRFVIGGADLMFP-GISIPPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWESVDVCYVPNGGFLDDVVIEDPALVSAMPQNDLNDTHYVTVKEDEGDLHDVSEANADVVIDTS------ASADMPNVSEEIATDMSGLHVTENAAGEEPGVEKETTSLSSEDVDSLLDKCLLQALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLLSKSSAGLISAKEDKYKKEIVLLAINRTHPDYTSFKPEKRST---ETIEPKHETSSSEGLR--------------SRSLFEVVEIYKSSSHVNPILTSVGADT----GKYFSASEAIDIVFRYVENENLVKPTDKAIVVLNAILCDALYKGTIKKG--SSYPTEIHKRDLGVTFLNRMQVHYRVSR--GNEAVVRKGVVKPVQIMSERRQGNKKVTKVSGLEAFLMDAELLASELQKKFACSTSVAELPGKKGQY-EVLVQGGVIEDLAKHLMDHYGVPKRYI 599
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: I3SX41_MEDTR (SUI1 domain-containing protein n=7 Tax=Trifolieae TaxID=163742 RepID=I3SX41_MEDTR) HSP 1 Score: 238 bits (606), Expect = 4.100e-64 Identity = 183/611 (29.95%), Postives = 295/611 (48.28%), Query Frame = 1
Query: 10 IEVVKLATRALVYFQVPSKTPLFFDADGRNK-LFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHP-PVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQ-MGPQTLPNEAFRPQGVFRLPS-----ENDAAVDNAARNAKPVNDWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
I V K R VY V P+FFD DGR +FPTVYALW + E+L P+ ++ VS++V+ GAD+M P G++ + GE + ENP P AVG + G+ GK L++ H Y D LW+ + + +PN F VF PS +D+ + AA +D A G +A + + + G L+ +D G + L+D+ LL A L TLKD LP+ S +S+ +LP RP G ++++KK+ Y+K++ +L+ S G+++++ DK + +V +VNR H + +FK + A + +++V + N R S+ ++ E+YK S ++ + + A T G+ T +E D++FAYI+ + L P NK+LV L+ LCD L+K A KK YPTE K +L + F+ R+Q HH + + + + + T+ I E+RQGN+ TK+ G+E++ ID L ++QK++ACST+ PG G E+M+QG + +L L + G+P+RF+
Sbjct: 48 ITVAKFQARVHVY-AVEGGFPVFFDIDGRGSDIFPTVYALWMVPELL------------------------PAFILKGGEVSRYVIGGADLMFP-GILVPPEGLPSFAAGETWAVKVPENPAPIAVGSTTMSSAEALKAGLRGKALRITHHYRDLLWESVEGRYVPNAGFLEDAVFGHPSLLSSPSDDSGLTEAACETSIDQQNNTKSDEAEGSRVANDENNDENTADEATAGVRDLKLTDSGSPNDPNDQHTLSTSDVDL--------LLDKCLLQA----LHTTLKDKDLPIPGSTLWSNHVLPCRPSGITLDIKKSSYKKLAKWLQAKASSGLISVKEDKHKKEVVLFSVNRKHADYSSFKPEK-----RPAEKPDQSSV--QSVNETR-----------SSKTLEVTEIYKPSVHVNPIFSSVGADT----GKLYTVSEATDIVFAYIEKQNLVKPTNKSLVVLDAILCDALFKGAIKKG--TTYPTEIHKKDLGQTFVSRMQPHHVVTR--GNESVVRKSALKTIQILTERRQGNKKVTKLSGMESFLIDADALASELQKKFACSTTVGELPGKKG--FEVMVQGGVIDDLGRHLVEQYGVPKRFI 592
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: UPI001CB9B510 (eukaryotic translation initiation factor 2D n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9B510) HSP 1 Score: 236 bits (603), Expect = 8.360e-64 Identity = 183/606 (30.20%), Postives = 290/606 (47.85%), Query Frame = 1
Query: 10 IEVVKLATRALVYFQVPSKTPLFFDADGRN-KLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHP-PVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGP-QTLPNEAFRPQGVFRLPSENDAAVDNAARNAKPVNDWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
+ V K R L+Y + P+FFD D R +FPTVY+LW++ +L P+ + VS++V+ GAD+M P G+ G +++ GE +M NP P AVG + G+ GK LK+ H Y D LW+ + +PN F VF PS + + +A +D E + + ++A G D + G EN KGT AL+D+ LL AF TLKD LP+ S +S+ +LP RPPG +++KK+ ++K+S +L+ S G+++ + DK + ++ A+NR HP+ ++K E AV S D +S+ +E+YK S ++ + + A T Y + AE +V+FAY++ E L P NK++V L+ LCD L+K A KK YP+E K +L F++R+Q HH + S + +GG+ + + E+RQGN+ TKV G+E++ ID +L ++QK++ACSTS PG G E+++QG + L L + GIP+R++
Sbjct: 48 VTVSKHPNRLLIYC-LEGGLPIFFDVDSRGTSIFPTVYSLWKVPHLL------------------------PAFTLKGGEVSRYVIGGADLMFP-GISVGAEGLPEFLAGELWAVMVPGNPAPIAVGSTCISSSEALKAGLRGKALKISHHYRDALWESAEGRYVPNAGFLDDVVFEDPS---LSTTSQQSDANQTSDHENGDNTEL--EVAMGDPNDDQQITTDFGDLKVTENDQSDKGTNEDQITLSIEDVD---------ALLDKCLLQAFYT----TLKDKDLPIAGSTLWSNHVLPCRPPGIVLDIKKSSHKKLSKWLQSKSSEGLISSKEDKYKKEVMVLAINRKHPDYISYKPEKQEV------EKVEQAVDP-------------SSEADIKNSMEVIEIYKPSVHVNPIFTSLGADTRQLY----SAAEASEVVFAYVEKENLVRPTNKSIVVLDAVLCDALFKGAIKKGSM--YPSEIHKKDLAPTFINRMQAHHQVTRGKES--VVKKGGLKPLQMLTERRQGNKKVTKVSGMESFLIDAELLASELQKKFACSTSVTELPGKKGH--EVLVQGGVIDVLAKYLVEQYGIPKRYI 580
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A0K9PUC3_ZOSMR (Eukaryotic translation initiation factor 2D n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PUC3_ZOSMR) HSP 1 Score: 238 bits (607), Expect = 1.130e-63 Identity = 184/604 (30.46%), Postives = 281/604 (46.52%), Query Frame = 1
Query: 22 KLATRALVYFQVPSKTPLFFDADGRN-KLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVH-PPVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGPQT-LPNEAFRPQGVFRLPSENDAAVDNAARNAKPVNDWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISLENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMAL--IDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
KL RA VY V TP+FFD DGR ++FPTVYALW++ E+L P+ ++ VS +++ GAD+M P G+ + GE I N P AVG + G+ GK L + H Y D LW +PNE F V P+ + + + P + +T+ VGG + E SDE + ++L +D L L L T+KD LP+ S+ +SS LLP RPPG ++++KK+ ++K+S +L S G++T + DK + ++ +VNR HP +F+ A + +++ AS S I +E++K S ++ + + A T G++ T +EV +++F Y++ E L P N A+V LN LCD LYK A KK YP+E K +L FL R+Q+HH++ S I +G I V I E+RQGN+ TKV G E + I+P L ++QK++ACST+ PG G E+++QG + +L L G GIP+R++
Sbjct: 123 KLMNRAHVY-GVEGGTPMFFDVDGRGTQIFPTVYALWQLPELL------------------------PAFMLKGSEVSHYIIGGADLMFP-GIRIPEEGFPSFTAGEIWAIKVPGNMAPIAVGVTAMSSSEALKAGLRGKALFINHYYHDSLWASADSPYVPNEGFYIDVVVEDPALSSPSKTVEGLDEPPRDLANIITEPGVGGSTHS---------------ELGKEISDELTSSMTDLKIEGSGLVEQTNNQNQNLSLEEVDALLERCLLQALHTTVKDKDLPLAGSMLWSSHLLPCRPPGVTLDIKKSSHKKLSKWLMSKSSSGLITAKEDKHKKEIIIQSVNRVHPNYTSFRPEKRQADVRQ-----------------QSSDVPASEGSTKKSQIDVMEIFKSSTHVNSIFTSVGADT----GQFYTASEVTNIVFRYVEMENLVKPSNPAIVILNPVLCDALYKGAVKKG--SAYPSEIHKKDLGATFLKRMQVHHSVTRKGEST--ICKGAIRNVQILTERRQGNKKVTKVSGFETFLINPEALASELQKKFACSTTVTELPGKKGH--EVLIQGGVIEDLAKQLVGHYGIPKRYI 658
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A5P1FGZ1_ASPOF (SUI1 domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FGZ1_ASPOF) HSP 1 Score: 237 bits (604), Expect = 3.420e-63 Identity = 200/618 (32.36%), Postives = 302/618 (48.87%), Query Frame = 1
Query: 10 IEVVKLATRALVYFQVPSKTPLFFDADGRN-KLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHPPVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQ-MGPQTLPNEAFRPQGVFRLPSENDAAVDNAARNAKPVNDWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISL---------ENSDEGKGTEAGXXXXXXXXXXXXXXXXXPMAL----IDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
I + K R VY + + P+ FD DGR ++FPTV+ALW++ ++L +F L+ VS F++ GAD+M P G+ ++ G+ + NP P AVG + G+ GK L++ H Y D LW+ +G +PNE F V P A+ + A N E+LT+ D+ P GG+I + E S+E +G XXXXXXXXXXXXXXXX L ID L L L T+KD LPM S +S+ +LP RP G ++++KK+ ++K+S +L+ S G+++++ DK + +V AVNR HPE +FK N + A+ S + +E+YK S ++ + S G Y T +E D++F YI+ E L P+NKA+V L+ LCD LYK A KK YPTE K +L FL+R+Q+HH + + + +G + + I E+RQGN+ TKV G+E + +D L ++QK++ACSTS PG G++ E+++QG + L L GIP+R++
Sbjct: 48 ITLAKYPNRVYVY-SIEGEFPMIFDVDGRGTQIFPTVFALWKVPDLL---------------------PAF--LLKGGEVSHFIIGGADLMFP-GIRIASEGLPSFLAGQPWSVKVPGNPAPIAVGTTTMSSGEALKAGLRGKALRIAHYYRDSLWESVGGHYVPNEGFLEDVVIEDPEIASASQISDASEGASGNRHEDLTNEVEESDVGPDT-----------GGQIEIDAPKDVARNEVSEELTSDLSGLXXXXXXXXXXXXXXXXXXVLSNEEIDILLEKCLLQALHTTVKDKDLPMPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLQSKSSSGLISVKEDKYKKEVVLLAVNRVHPEYTSFKPEKRLPE-----------------NVDQTLDPSAADVRQSKLQLEVVEIYKPSTHVNPIF----MSVGADIGHYYTASEAADIVFRYIEKENLVKPMNKAMVVLDATLCDALYKGAIKKG--SSYPTEIHKKDLGATFLNRMQVHHRVSR--GNDVAVRKGAMKPIQIMTERRQGNKKVTKVSGVETFLLDAESLASELQKKFACSTSVAELPGKKGQH-EVLVQGGVIDNLAKHLIEHYGIPKRYI 603
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A8J5VHL3_ZIZPA (Uncharacterized protein n=3 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VHL3_ZIZPA) HSP 1 Score: 234 bits (597), Expect = 7.940e-63 Identity = 191/625 (30.56%), Postives = 287/625 (45.92%), Query Frame = 1
Query: 10 IEVVKLATRALVYFQVPSKTPLFFDADGR-NKLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHP-PVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGP-QTLPNEAFRPQGVFRLPSENDAAVDNAARNAKPVNDWEELTDVAVGGDIAPGASGGDGSRSAGEGGRISLENS-------------------DEGKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQS--LVAVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
+ V K R LVY + + P+ FD DGR ++LFPTVYALW++ ++L P+ + VS+F+L GAD+M P G+ + G+ I NP P AVG + G+ GK L++ H Y D LW + +PNE F V P N A ++P++ E+ A G D S GE + + S E K E ID L L L ++KD LP+L S +S+ +LP RPPG ++++KK+ ++K+S +L+ S G+++ + DK + L+ VNR HP+ AF+ Q E N V AEG S + + E+YK S ++ + A T G+Y + +E D++F YI+ E L P +KA VTL+ LCD LYK A KK YPTE K +L FL+R+Q+HH + I +G I TV I E+RQGN+ T+V GLE + +D L ++QK++ACST++ PG G++ E+++QG + +L L G+P+RF+
Sbjct: 48 VTVAKYPNRVLVY-GIEGEFPMLFDVDGRGHELFPTVYALWKVPDML------------------------PAFTLKGGEVSRFILGGADLMFP-GISIPTEGLPSFQAGKPWSIKVPGNPAPIAVGATTMSSNEALKAGLRGKALRIAHYYKDSLWDSADGRYVPNEGFYDDIVVEDP--------NYASPSQPIDSSEDH------------AEGMDDSTIEGEEAAVDVSESHIRDPVIHIEAVEDLTSGVSEVKLPEDKTSEEPSQPTEEREHQNLSTEEIDSLLEKCLLQALHTSVKDKDLPILGSTLWSNHILPYRPPGVTLDIKKSSHKKLSKWLQSKSSSGLISAKEDKHKREVMLLGVNRGHPDYIAFRPEKKV---QELVERHDN-VIAEG---------------SSTNQLEVAEIYKPSSHVNPIFMAVGADT----GKYYSASEASDIVFRYIEKENLVKPTDKAKVTLDAALCDALYKGAIKKG--SAYPTEIHKRDLGSTFLNRMQIHHRVSR--GDEVIIRKGAIRTVQIMTERRQGNKKMTRVSGLECFLMDADSLASELQKKFACSTTTAELPGKKGQH-EVLVQGGVIDDLAKHLVDHYGVPKRFI 598
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Match: A0A059DE35_EUCGR (SUI1 domain-containing protein n=9 Tax=Myrtoideae TaxID=1699513 RepID=A0A059DE35_EUCGR) HSP 1 Score: 232 bits (592), Expect = 1.500e-62 Identity = 185/612 (30.23%), Postives = 288/612 (47.06%), Query Frame = 1
Query: 16 VVKLATRALVYFQVPSKTPLFFDADGR-NKLFPTVYALWRMREILACGKASTAAAVERSARSEACRESFPSLVVHPPVSKFVLNGADVMLPAGVISGGIAKVDYVKGERRCIMSAENPDPYAVGEMLKDREGVIYGGMTGKGLKVFHCYLDFLWQMGP-QTLPNEAFRPQGVFRLPS-----ENDAAVDNAARNAKPVNDWEELTDVAVGGD-IAPGASGGDGSRSAGEGGRISLENSDE---GKGTEAGXXXXXXXXXXXXXXXXXPMALIDERLLHAFLNCLKKTLKDAQLPMLVSIFYSSVLLPSRPPGTSINVKKTRYRKISNFLKEMESRGIVTLQVDKDVQSLV--AVNRSHPELRAFKGTSATAAAQVANEAARNAVTAEGWNGARAASYGASRADDSASSIRALELYKLSHNIKKMLGNDAASTTGKYGEYLTPAEVRDVLFAYIKSEGLEHPINKALVTLNGPLCDNLYKPANKKAPRVEYPTEAAKAELPRRFLDRLQLHHAIILPCSSHPYIGRGGIPTVFIEVEKRQGNRHATKVRGLEAYGIDPAVLGRQVQKRYACSTSSHPAPGTNGKYLELMLQGHLATELEDLLSGEMGIPRRFL 1812
V KL R VY V + P+FFD DGR +++FP+VYALWR+ EI+ +F L+ VS+F++ GAD+M P G+ + GE + NP P AVG + G+ GK L++ H Y D LW+ + PN F VF P+ + A + + + D E DV V D + P D + GR E+SD+ GT A +D L L L T+KD LPM S +S+ +LP RP G ++++KK+ Y+K+S +L+ + G+V+++ DK + +V VNR+HP+ AF+ + V G AA + S ++ +E+YK S ++ + + A G+ T +E D++F Y++ E L P NK+ V L+ LCD L+K A KK YPTE K +L F+ R+Q HH I S + +G + + I E+RQGN+ T++ G+E + +DP L ++QK++ACST+ PG G E+++QG + +L L + GIP+R++
Sbjct: 3 VAKLQNRVHVY-SVEGEFPMFFDIDGRGSEIFPSVYALWRVPEIV---------------------PAF--LLKGGEVSRFIIGGADLMFP-GISVPPEGLPSFAAGEIWAVKVPGNPAPIAVGTTTMSSSEALKAGLRGKALRITHHYRDILWESAEGRFAPNAGFLEDMVFEDPAFLSSRQESVACEGPSEVSNDQGDGAEDEDVTVSVDKMNP-----DSIQMREMDGRN--ESSDKIVADIGTLTVADDVSAEGSNVEDQHNFTSADVDALLDKCLLQALYTTIKDKDLPMPGSTLWSNHVLPCRPQGVTLDIKKSSYKKLSKWLQAKSTAGLVSVKEDKHKKEVVLMGVNRNHPDYSAFRPE-------------KRPVEKSDQGGEHAA-----KESQSNKTLNVVEVYKPSVHVNAIFTSVGADR----GKLFTASEATDIVFRYVEQENLVKPTNKSTVVLDATLCDALFKGAIKKGSM--YPTEIHKKDLGSTFISRMQPHHVITR--GSDSVVRKGALKAIQIMTERRQGNKKVTRLSGMETFLVDPEALASELQKKFACSTTVAELPGKKG--YEVLVQGGVIDDLARHLIEQYGIPKRYI 554 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13439.2439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13439.2439.1 >prot_H-elongata_contig13439.2439.1 ID=prot_H-elongata_contig13439.2439.1|Name=mRNA_H-elongata_contig13439.2439.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=575bp MREILACGKASTAAAVERSARSEACRESFPSLVVHPPVSKFVLNGADVMLback to top mRNA from alignment at H-elongata_contig13439:608..7514- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13439.2439.1 ID=mRNA_H-elongata_contig13439.2439.1|Name=mRNA_H-elongata_contig13439.2439.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6907bp|location=Sequence derived from alignment at H-elongata_contig13439:608..7514- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13439:608..7514- >mRNA_H-elongata_contig13439.2439.1 ID=mRNA_H-elongata_contig13439.2439.1|Name=mRNA_H-elongata_contig13439.2439.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3450bp|location=Sequence derived from alignment at H-elongata_contig13439:608..7514- (Himanthalia elongata Himel1 dioecious)back to top |