mRNA_H-elongata_contig13381.2401.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A6H5JUU7_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU7_9PHAE) HSP 1 Score: 328 bits (841), Expect = 1.040e-102 Identity = 211/367 (57.49%), Postives = 247/367 (67.30%), Query Frame = 1
Query: 28 QHVAVRGLNILRAKARNVLVKEASALEERSPLAAQRLNREAREIENWGREAEEDDRHAFREKTRKMHDKLVFEEGRRREVMRKAAEEARARKAEEAKARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAAASIPRNRTGRVVLTSEQKRQVLRAWTPDGDGAA--VAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQA 1122
Q AVR LN LR+KAR L K+A + R+P AA+RL +AR IENWGREAEE + EK R+ + L XXXXXX XXXXXXXXXXXXXX R AA++ R L+ EQ+ QV AW+ G A + V+AFND V K SL TLR G WLGDEV+NLYM+ L RNR+A+A G+ VPKCGI++SFF+TQLSDNG+GYRY GVKRFLKKAKI+LFD+DKFIFP+NVNQ HWTLAVINFR +RLEYYDSL + FG GFE+M RFVDDES+ KRGG MDISHWPR + P QRNG DCGVFAS+FADRLSKG PL+FSQ+
Sbjct: 162 QGFAVRSLNSLRSKARQSLEKKARDIHHRNPSAAERLLADARSIENWGREAEEGAKREAAEKARQRSEALXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKERAEXXXXXXXXXXXXXXEHKEARLAAAVAAAVQERPELSPEQEDQVRDAWSSQGGAADGDIVVRAFNDMVSKASLRTLRSGEWLGDEVINLYMKSLQARNREAVASGKQVPKCGIMSSFFYTQLSDNGRGYRYQGVKRFLKKAKIDLFDLDKFIFPINVNQNHWTLAVINFRLERLEYYDSLGAP-FGDA-GFEYMARFVDDESRNKRGGQEMDISHWPRFNYQNVPHQRNGIDCGVFASMFADRLSKGRPLSFSQS 524
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: D7FMM6_ECTSI (Protease, Ulp1 family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM6_ECTSI) HSP 1 Score: 302 bits (773), Expect = 1.210e-90 Identity = 207/386 (53.63%), Postives = 242/386 (62.69%), Query Frame = 1
Query: 28 QHVAVRGLNILRAKARNVLVKEASALEERSPLAAQRLNREAREIENWGREAEEDDRHAFREKTRKMHDKLVFEEGRRREVMRKAAEE-------------------ARARKAEEAKARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAAASIPRNRTGRVVLTSEQKRQVLRAWTPDGDGAA--VAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQA 1122
Q AVR LN LR+KAR L K+A + R+P AA++L +AR IENWGREAEE A RE ARAR+ E XXXXXXXX X XXXXXXXXXXX R L+ EQ+ +V AW+ G A + V+AFND V K SL TLR G WLGDEV+NLYM+ L RNR+A+A G+ VPKCGI++SFF+TQLSDNG+GYRY GVKRFLKKAKI+LFD+DKFIFP+NVNQ HWTLAVINFR +RLEYYDSL + F GFE+M RFVDDES++KRGG MDISHWP + P QRN DCGVFAS+FADRLSKG PL+FSQ+
Sbjct: 407 QDFAVRSLNSLRSKARQSLEKKAHDIHHRNPSAAEQLLADARSIENWGREAEEG---AKREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARARERVEEXXXXXXXXXXXXRXQKEARLAAXXXXXXXXXXXVQERPE------------LSPEQEDRVRDAWSSQGGAADGDIVVRAFNDMVSKASLRTLRSGEWLGDEVINLYMKSLQARNREAVASGKQVPKCGIMSSFFYTQLSDNGRGYRYQGVKRFLKKAKIDLFDLDKFIFPINVNQNHWTLAVINFRLERLEYYDSLGAP-FDDA-GFEYMARFVDDESRSKRGGQEMDISHWPSFNYQNVPHQRNEIDCGVFASMFADRLSKGRPLSFSQS 775
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A7S2TT36_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TT36_9EUKA) HSP 1 Score: 154 bits (388), Expect = 5.980e-41 Identity = 85/230 (36.96%), Postives = 131/230 (56.96%), Query Frame = 1
Query: 448 NRTGRVVLTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRIL---LERNRDAIACGRPVPKCGIV-NSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFD--VDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
N G+ + +E+K + D + + +K FN + K L TL+DG WL DEV+N +++++ +ERN ++ + N+FF+ +LSDNG+GY Y VKR+ KK K+ + + +DK I P+NV HW L+VINF+ KR+EYYDSL + M ++V DE+K G +D+ W + P QRNG DCGVF + +AD +S+ L+F+Q
Sbjct: 6 NAKGKPCINAEEKERAEELIF-DTEDEEIVIKKFNVEMLGKDLQTLQDGEWLNDEVINFHIKMMKDRMERNVESDLVPEAFKSRNLFFNTFFYAKLSDNGRGYNYQAVKRWSKKQKVQVHESQLDKVITPINVGGNHWCLSVINFKEKRIEYYDSLGGKNAKCMQNLR---KYVQDEAKQYGNGE-IDMKGWTDYTPRDIPQQRNGCDCGVFTTKYADYISENRTLDFTQ 230
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A812XP77_SYMPI (SENP1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XP77_SYMPI) HSP 1 Score: 157 bits (397), Expect = 1.750e-40 Identity = 89/233 (38.20%), Postives = 129/233 (55.36%), Query Frame = 1
Query: 427 AAASIPRNRTGRVVLTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPM--QRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
AA IP+ + +T E+++ A G V F+ V ++ L LR G WL DEV+N Y ++L ER++ G PKC NSFF+ +LS N K Y Y V+R+ KAKI++F++D IFP+N+ +THW + I+ + K Y+DS+ S F+ R++ DE KAK+ + W ++ + E P+ QRNG+DCGVF FAD LS G PL F Q
Sbjct: 174 AALKIPKKKRRVPPITLEEEKLADDALFGQGGADEVIASRFSVEVTRRQLECLRPGEWLNDEVINFYYKLLQERSKT----GTTSPKCWFTNSFFWPKLSGNNKEYNYKEVRRWTIKAKIDVFEMDYIIFPMNIAETHWAMGAIDLKEKGFRYFDSMFSNPPSNF--VAFLRRYLADEHKAKKSKDLPGVDGW-KLLIPEPPVPQQRNGYDCGVFTCFFADCLSAGKPLAFDQ 399
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A813HC23_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HC23_POLGL) HSP 1 Score: 156 bits (395), Expect = 3.600e-40 Identity = 92/239 (38.49%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 427 AAAS--IPRNRTGRVVLTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNR---DAIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMD-ISHWPRVDVAERPM--QRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
AAAS +P R+ LT E+ R +G V F+ V K+ + LR G WL DEV+N Y ++L ER + DA PKC NSFF+ +LS N K Y Y V+R+ KAK+++F++D IFP+N+ +THW + I+ R K Y+DS+ S+ F+ +++ DE KAK+GG ++ + W ++ E+P+ QRNG+DCGVF FAD S G L F Q
Sbjct: 173 AAASPRMPAKRSRVPTLTDEEHRLAESGLWGEGSPNEVIASRFSVEVTKRQIECLRPGEWLNDEVINFYYKLLQERGKFIDDA-------PKCWFTNSFFWPKLSGNNKEYNYKEVRRWTIKAKVDIFELDYVIFPMNIGETHWAMGAIDLRSKCFRYFDSMISKPHSNFA--PFLQKYLTDEHKAKKGGKVLEGVESW-KLLAPEKPVPQQRNGYDCGVFTCSFADCFSAGRELAFDQ 401
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A812JXE8_9DINO (ULP1B protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JXE8_9DINO) HSP 1 Score: 155 bits (393), Expect = 6.990e-40 Identity = 88/235 (37.45%), Postives = 126/235 (53.62%), Query Frame = 1
Query: 427 AAASIPRNRTGRVVLTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHW----PRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
AA +P+ + +T E+++ A G G V F+ V ++ L LR G WL DEV+N Y ++L ER++ + PK NSFF+ +LS N K Y Y V+R+ KAK+++FD+D IFP+N+ +THW++ I+ R K Y+DS+ S F+ R++ DE KAK+ + W P V P QRNG+DCGVF FAD LS G L F Q
Sbjct: 177 AALKMPKKKRRVPPITPEEEKLAEDALFGQGSGDEVVASRFSVEVTRRQLECLRPGEWLNDEVINFYYKLLQERSKTIASS----PKSWFTNSFFWPKLSGNNKEYNYKEVRRWTIKAKVDIFDMDYVIFPMNIAETHWSMGAIDMREKGFRYFDSMFSNPPSNF--VAFLRRYLADEHKAKKSKDLQGVDDWKLLTPEPPV---PQQRNGYDCGVFTCFFADCLSAGKSLGFDQ 402
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A7S3YNI5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YNI5_9EUKA) HSP 1 Score: 155 bits (392), Expect = 7.420e-40 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 478 EQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCG-----IVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFD--VDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
EQ+ + L T D D + +K FN + K + TL+DG+WL DE++N +M+++ +R D A VP+ N+FF+ +LSDNGKGY Y V+R+ KK K+ + + +DK I P+NV +HW L+VINF+ KR+EYYDSL M R+V DE+K R +D+ W + P QRNG DCGVF + +AD +S+ L+F+Q
Sbjct: 181 EQRAEELIFDTDDDD---LVIKKFNVEMLGKDIQTLQDGVWLNDEIINFHMKMMKDR-MDRNAKSDLVPEAFKSRNLFFNTFFYAKLSDNGKGYNYKAVRRWSKKQKVQVHESQLDKVITPINVGNSHWCLSVINFKEKRIEYYDSLGGTNPKCMQNLR---RYVQDEAKQYRKEE-IDMKGWTDYTPRDIPQQRNGCDCGVFTTKYADYISENRDLDFTQ 393
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A7S0DPN6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DPN6_9EUKA) HSP 1 Score: 150 bits (380), Expect = 1.750e-39 Identity = 85/224 (37.95%), Postives = 128/224 (57.14%), Query Frame = 1
Query: 469 LTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRD-----AIACGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLF--DVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAERPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
L+ E+K++ R D + +K FN + K + TL+DG+WL DEV+N ++++ +R D + V +C N+FF+++L+ GKGY+Y GV+R+ KK K+ + +DK I PVNV+ THW LAVINF+ KR EY+DSL S+ ++ ++V DE K R +D+S W + P Q NG DCGVF + FA+ S +FSQ
Sbjct: 38 LSREEKKEAERL-IYGTDEKEIVIKKFNVDLLGKDMHTLQDGVWLNDEVINFHIKMFQDRMLDYQKSPTVPSAEKV-RCLFFNTFFYSKLTQKGKGYKYKGVRRWSKKQKLEVHPSSIDKVIVPVNVHGTHWCLAVINFQKKRFEYFDSLGSKNIRCLENLR---QYVIDEMKHYRN-EVVDLSDWTNYFPKDIPQQNNGCDCGVFTTQFANYASLNRKFDFSQ 255
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A7S0FZ62_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FZ62_9DINO) HSP 1 Score: 147 bits (371), Expect = 1.060e-38 Identity = 79/204 (38.73%), Postives = 113/204 (55.39%), Query Frame = 1
Query: 514 DGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIACGRPVPKCGIVNSFFFTQLSDN-GKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDV-AERPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
+G+ + FN + + L LR G WL DEV+N Y ++L ER++ + PKC NSFF+ +LS + Y + V+R+ KAK+++FD D IFP+N+ +THW + I+ R K Y+DS+ SR F+ R+V DE KAK+GG + W + A P QRNG+DCGVF FA+ S G L F Q
Sbjct: 8 EGNPDEILASRFNVELKRSQLECLRPGEWLNDEVINFYFKLLQERSKKT----KGAPKCWFTNSFFWPKLSGKRNEEYNFKEVRRWTTKAKVDVFDQDYVIFPMNIGETHWAMGAIDLRSKGFRYFDSMFSRPHKNF--VPFLRRYVGDEHKAKKGGPLDGLDEWDLLKPEAPVPQQRNGYDCGVFTCSFAEWFSSGRALEFDQ 205
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Match: A0A7S2V080_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V080_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.600e-37 Identity = 79/219 (36.07%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 469 LTSEQKRQVLRAWTPDGDGAAVAVKAFNDTVFKKSLLTLRDGLWLGDEVVNLYMRILLERNRDAIA-CGRPVPKCGIVNSFFFTQLSDNGKGYRYAGVKRFLKKAKINLFDVDKFIFPVNVNQTHWTLAVINFRWKRLEYYDSLPSRGFGKMDGFEFMVRFVDDESKAKRGGHGMDISHWPRVDVAE-RPMQRNGFDCGVFASIFADRLSKGIPLNFSQ 1119
LT +++ V A+ G + V N + ++ + L +WL DEV+NLY+ +L +R + +A GR P+ +NSFF +L + +GYRYA V+R+ ++ K+++F ++ + PVNV HW LA ++ KR++YYDS+ G + + +++ DE K K+ +DI+ W V + P Q NG DCGVFA +FAD +S+G+PL+FSQ
Sbjct: 37 LTPGERKTVHWAFR-GGPPSQVVANLHNVQLQREKIKCLEPTVWLLDEVINLYINLLEDREKRHMAESGRTTPRAVFMNSFFMARLFVD-EGYRYANVRRWTRRRKLDVFSAERVVVPVNVGNMHWCLACVHVPQKRIQYYDSMGGAGRNYLGA---LAQYLQDEMKDKKK-ETLDINDWEMVGTVQGTPQQNNGCDCGVFACMFADYVSEGLPLSFSQ 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13381.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13381.2401.1 >prot_H-elongata_contig13381.2401.1 ID=prot_H-elongata_contig13381.2401.1|Name=mRNA_H-elongata_contig13381.2401.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=374bp MLDRPLFRPQHVAVRGLNILRAKARNVLVKEASALEERSPLAAQRLNREAback to top mRNA from alignment at H-elongata_contig13381:1600..7922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13381.2401.1 ID=mRNA_H-elongata_contig13381.2401.1|Name=mRNA_H-elongata_contig13381.2401.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6323bp|location=Sequence derived from alignment at H-elongata_contig13381:1600..7922+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13381:1600..7922+ >mRNA_H-elongata_contig13381.2401.1 ID=mRNA_H-elongata_contig13381.2401.1|Name=mRNA_H-elongata_contig13381.2401.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2244bp|location=Sequence derived from alignment at H-elongata_contig13381:1600..7922+ (Himanthalia elongata Himel1 dioecious)back to top |