mRNA_H-elongata_contig13354.2383.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: D7G2X8_ECTSI (Nicotianamide aminotransferase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X8_ECTSI) HSP 1 Score: 356 bits (913), Expect = 1.220e-120 Identity = 161/216 (74.54%), Postives = 192/216 (88.89%), Query Frame = 1
Query: 1 TSGNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAGGVKGEGAFYFLIPVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSKE 648
T GNP+GAVCP+ +E+IARLC E+ WLVVDEAYEHFL+D +RH+SPCGN LGCPDN++HLFTMSKSFGLAGWRVGYAVYP+WAS++MVKVQDTLPTHACT SQ +ALAALE GG DWV+S+V+SL+RCR AMW+AV+D GGV G+G+FYFL+PV ++EDRA+D+LARR+GVL TPGRAFGAPGHIRVSYGSLPEE+CL A L +GL+ LS E
Sbjct: 144 TPGNPSGAVCPRETLEEIARLCGENNAWLVVDEAYEHFLHDGERHFSPCGNSLGCPDNVIHLFTMSKSFGLAGWRVGYAVYPSWASKEMVKVQDTLPTHACTGSQKIALAALE-GGVDWVKSKVSSLSRCRSAMWAAVKDMGGVMGKGSFYFLVPVPVEEDRAVDVLARRWGVLTTPGRAFGAPGHIRVSYGSLPEEQCLPAIRSLAEGLRELSNE 358
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A6H5KAS1_9PHAE (VAS1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS1_9PHAE) HSP 1 Score: 320 bits (820), Expect = 3.740e-107 Identity = 161/297 (54.21%), Postives = 191/297 (64.31%), Query Frame = 1
Query: 1 TSGNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQR---------------------------------------------------------------------------------HYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAGGVKGEGAFYFLIPVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSKE 648
T GNP+GAVCP+ ME+I RLC E+ WLVVDEAYEHFL+D +R H+SPCGN LGCPDN++HLFTMSKSFGLAGWRVGYAVYP+WAS++MVKVQDTLPTHACT SQ +ALAALE GG DWV+S+V+SL+RCR AMW+AV+D GGV G+G+FYFL+PV ++EDRA+D+LARR+GVL TPGRAFGAPGHIRVSYGSLPEE+CL A L +GL+ LS E
Sbjct: 19 TPGNPSGAVCPRETMEEITRLCGENNAWLVVDEAYEHFLHDGERWGTGPAGKVSAAIPRPKLHPLVFRRPHPLPDVGLVLLGLEPSPTPPIILPPSLNPYVGTPTVLPHYESPHPRLFDPFFFSRHFSPCGNSLGCPDNVIHLFTMSKSFGLAGWRVGYAVYPSWASKEMVKVQDTLPTHACTGSQKIALAALE-GGVDWVKSKVSSLSRCRSAMWAAVKDMGGVMGKGSFYFLVPVPVEEDRAVDVLARRWGVLTTPGRAFGAPGHIRVSYGSLPEEQCLPAIRSLAEGLRELSNE 314
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A835YRY9_9STRA (Nicotianamide aminotransferase A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY9_9STRA) HSP 1 Score: 256 bits (655), Expect = 4.170e-81 Identity = 130/223 (58.30%), Postives = 161/223 (72.20%), Query Frame = 1
Query: 1 TSGNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCD-----WVRSRVASLTRCREAMWSAVRDAGGVKGEGAFYFLIPVQ---MDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSK 645
T GNP+GAV + M+E+IA+LC EHGTWLV+DEAY F++D +HYSPC N LG D+I+H+++ SKS+GLAGWRVGY VYP SE + KVQDT+PTHA ASQ +ALAA WV+ +VA+L CREAMWS V G V+ GAFYF +P+ ED AI++LA + GVLVTPG AFGAPGHIRVSYGSLPE ECL A RL GL++L++
Sbjct: 173 TPGNPSGAVYSRAMIEEIAQLCREHGTWLVIDEAYCDFVHDGAQHYSPCANALGF-DSIIHIYSFSKSYGLAGWRVGYMVYPQRISEHIQKVQDTVPTHAAVASQRLALAAXXXXXXXXXXXAWVKQQVAALHTCREAMWSQVSPYGTVRTNGAFYFFVPLPGGPASEDAAIELLAMQCGVLVTPGSAFGAPGHIRVSYGSLPEPECLEAIARLGRGLRSLAQ 394
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A4D9CSE6_9STRA (Aminotran_1_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSE6_9STRA) HSP 1 Score: 225 bits (574), Expect = 3.120e-69 Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 1
Query: 1 TSGNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRD--AGGVKGEGAFYFL--IPVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSKEVKIKAS 666
T GNPTGAVCP+ +++++A LC + G WLVVDE+YEHFL++ RH S C + L +VH+++ SKS+G+AGWR+GY VYP + +QDT+PTHA SQ V LAAL G +WV+ +VA LT CRE +W+ + G V+ EGAFYFL +P + E A+ LA + VL TPG AFGAPG +R+SYGSLP EC+ A RL GL AL KE K S
Sbjct: 145 TPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASALDF-SGLVHVYSFSKSYGMAGWRLGYLVYPRGLKTALRSLQDTIPTHAAMVSQAVGLAALGAGR-EWVQRQVAGLTDCRERLWAVLSKHCPGSVRTEGAFYFLAQLPPHVSEAEAVHRLATEYRVLCTPGEAFGAPGTLRLSYGSLPPAECIDALGRLDAGLAALIKEGTDKVS 368
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A7S2ZSN6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSN6_9RHOD) HSP 1 Score: 189 bits (479), Expect = 1.160e-56 Identity = 99/215 (46.05%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 7 GNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAGGVKGEGAFYFLI--PVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSK 645
GNP+G+V + ++E++ LC + G WL+ DEAYEHFLY+S HYSP P+ ++++FTMSKS+ LAGWRVGY YP S+ M+K+ DT+PTHAC SQ +A ALE G D+ L R R+ +W V VK GAFYF I P D+ A +LA ++ VLV PG AFG PG++R+SY L E A L +GL LS+
Sbjct: 16 GNPSGSVAERELVEELETLCHDAGIWLISDEAYEHFLYNSVAHYSPSLY----PNQVINIFTMSKSYALAGWRVGYISYPKILSDSMLKINDTVPTHACRTSQSIATKALEDDG-DFPAVHAKELERNRDEIWRVVEKYATVKTTGAFYFFIKAPGGYDDLDATRILAEKYNVLVVPGVAFGMPGYLRISYAGLRYEVMKTAAACLEEGLLYLSR 225
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: L8GQ78_ACACA (Aspartate aminotransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ78_ACACA) HSP 1 Score: 191 bits (486), Expect = 6.470e-56 Identity = 102/218 (46.79%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 10 NPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAV--------RDAGGVKGEGAFYFL--IPVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQ 633
NPTGA+ P ++KI +LC + G WLV DEAYE F++D H SP G N++++FT SKS+GLAGWRVGY ++P E M KVQDT+P +AC SQ +AL AL G WV VA+L R RE W AV R G G+ Y +P +D+ AI L+ + V V PG+ FGAPGH+RVS+G+LP E C A RL GLQ
Sbjct: 167 NPTGAITPPETIQKIQQLCLDKGLWLVADEAYEDFVFDGATHRSPTG------PNVINIFTFSKSYGLAGWRVGYVLFPPELKEGMDKVQDTVPINACQISQRLALHALTNAGPQWVAQMVATLQRNRELAWDAVEPLRTHHERQGRTAPGVGSLYVFAKLPEGVDDMAAIKYLSHQHKVCVLPGKGFGAPGHLRVSFGNLPPELCEQAALRLKQGLQ 378
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A7S2ZU54_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZU54_9RHOD) HSP 1 Score: 189 bits (479), Expect = 1.550e-54 Identity = 99/215 (46.05%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 7 GNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAGGVKGEGAFYFLI--PVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSK 645
GNP+G+V + ++E++ LC + G WL+ DEAYEHFLY+S HYSP P+ ++++FTMSKS+ LAGWRVGY YP S+ M+K+ DT+PTHAC SQ +A ALE G D+ L R R+ +W V VK GAFYF I P D+ A +LA ++ VLV PG AFG PG++R+SY L E A L +GL LS+
Sbjct: 197 GNPSGSVAERELVEELETLCHDAGIWLISDEAYEHFLYNSVAHYSPSLY----PNQVINIFTMSKSYALAGWRVGYISYPKILSDSMLKINDTVPTHACRTSQSIATKALEDDG-DFPAVHAKELERNRDEIWRVVEKYATVKTTGAFYFFIKAPGGYDDLDATRILAEKYNVLVVPGVAFGMPGYLRISYAGLRYEVMKTAAACLEEGLLYLSR 406
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A8J6CHH3_DIALT (Aminotran_1_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHH3_DIALT) HSP 1 Score: 179 bits (454), Expect = 7.440e-51 Identity = 98/230 (42.61%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 7 GNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWASEDMVKVQDTLPTHACTASQWVALAALE-------VGGCDWVRSRVASLTRCREAMWSAVR-------DAGGVKGEGAFYFLI--PVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLP--EEECLAATERLHDGLQALS 642
GNP+GAV P+R++ + HG W++ DEAYEHF++D H+SP R +++ LFTMSKS+G+AGWRVGY YP E M+K+QD+LPTHA T +Q +A AAL G WVR RVA+L R A+W V DA V+GEGA Y + P + ++ A+ LA F VLV PG G GH+R+S+ S+ +E A L GL A++
Sbjct: 180 GNPSGAVIPERLLRALVLEAIAHGLWVISDEAYEHFVFDGAAHFSPAAER-AFSAHVLSLFTMSKSYGMAGWRVGYVSYPERLDEVMLKIQDSLPTHATTLAQVIAAAALSDXXDSGASAGVAWVRERVATLRGVRRAVWDIVAETLEVGGDAKSVRGEGALYAFVRLPDGVCDEDAVARLADEFSVLVLPGSCAGMGGHVRISFASVEPGSDEAAGALAALRAGLGAIA 408
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A067KM24_JATCU (Aminotran_1_2 domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KM24_JATCU) HSP 1 Score: 174 bits (441), Expect = 4.010e-49 Identity = 94/220 (42.73%), Postives = 135/220 (61.36%), Query Frame = 1
Query: 7 GNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWAS---EDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAG--GVKG-EGAFYF---LIPVQMDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQAL 639
GNP+G P+ ++++I+ LC E G+WL+VD YE+F+YD +H G D++V++F+ SK++G+ GWRVGY YP+ ++KVQD +P A SQ++AL +LEVG +WV RV L + RE + A+ G VKG EGA Y L +D+ + + LA R GV+V PG A G PGH+R+S+G L E +C AA ERL GL+ L
Sbjct: 175 GNPSGTYIPEPLLKRISDLCREAGSWLIVDNTYEYFMYDGLKHSCVEG------DHVVNIFSFSKAYGMMGWRVGYIAYPSGVEGVGTQLLKVQDNIPICASLISQYLALYSLEVGP-EWVSERVKDLVKNREILLKALSPLGEGAVKGGEGALYLWAKLPDKYLDDTKVVRWLATRHGVVVIPGDACGCPGHLRISFGGLIEADCKAAAERLKKGLEEL 387
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Match: A0A7J8MKQ0_9ROSI (Aminotran_1_2 domain-containing protein (Fragment) n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8MKQ0_9ROSI) HSP 1 Score: 172 bits (436), Expect = 4.160e-49 Identity = 93/223 (41.70%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 7 GNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGNRLGCPDNIVHLFTMSKSFGLAGWRVGYAVYPAWA---SEDMVKVQDTLPTHACTASQWVALAALEVGGCDWVRSRVASLTRCREAMWSAVRDAGG---VKGEGAFYF--LIPVQ-MDEDRAIDMLARRFGVLVTPGRAFGAPGHIRVSYGSLPEEECLAATERLHDGLQALSKE 648
GNP+G P+ ++++I+ +C + G WLVVD YE+F+YD +H G D+IV++F+ SK++G+ GWRVGY YP + ++KVQD +P A SQ +AL +LEVG +WVR +V L + RE + A+ G + GEGA Y +P + MD+ + + LA R GV+V PG A G+PGH+R+S+G L E +C AA +RL GL+ L K+
Sbjct: 108 GNPSGTYIPELLLKRISDICKKAGCWLVVDNTYEYFMYDGLKHSCVEG------DHIVNIFSFSKAYGMMGWRVGYIAYPTEVEGLATQLLKVQDNIPICASIISQRLALHSLEVGP-EWVREQVKDLVKNREIVIEALSPLGEGAVLGGEGAIYLWATLPEKCMDDVKVVHWLAHRHGVVVIPGSACGSPGHLRISFGGLMENDCRAAAQRLKTGLEELVKD 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13354.2383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13354.2383.1 >prot_H-elongata_contig13354.2383.1 ID=prot_H-elongata_contig13354.2383.1|Name=mRNA_H-elongata_contig13354.2383.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp TSGNPTGAVCPQRMMEKIARLCSEHGTWLVVDEAYEHFLYDSQRHYSPCGback to top mRNA from alignment at H-elongata_contig13354:6525..8014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13354.2383.1 ID=mRNA_H-elongata_contig13354.2383.1|Name=mRNA_H-elongata_contig13354.2383.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1490bp|location=Sequence derived from alignment at H-elongata_contig13354:6525..8014- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13354:6525..8014- >mRNA_H-elongata_contig13354.2383.1 ID=mRNA_H-elongata_contig13354.2383.1|Name=mRNA_H-elongata_contig13354.2383.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1344bp|location=Sequence derived from alignment at H-elongata_contig13354:6525..8014- (Himanthalia elongata Himel1 dioecious)back to top |