mRNA_H-elongata_contig13248.2324.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13248.2324.1
Unique NamemRNA_H-elongata_contig13248.2324.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: D7FHR7_ECTSI (ABC-type spermidine/putrescine transport system, ATPase component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR7_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 3.010e-65
Identity = 117/192 (60.94%), Postives = 144/192 (75.00%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKR-GHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSY-RIVMELAKQVVELTKGRVTEVHIY 570
            VG   SGK+T LKCLAGLE PT G+I  +VSGLR+ VYVGR   S  G++VR  + +EVA HLPGK  G  VE+ TN +LGAL+LHGVS T+DRDLSGGEVYRFA+AMALA+GC SP+PPVLLLD  FD+SD R      VR GVEF LFDLQ+KMGVML+FT+     +V EL +QV E ++G++ EV ++
Sbjct:  111 VGPWNSGKSTFLKCLAGLEAPTSGEI--TVSGLRKPVYVGRAITSTTGKTVRQLLREEVASHLPGKNNGRQVELTTNTLLGALELHGVSLTKDRDLSGGEVYRFAMAMALARGCGSPTPPVLLLDDMFDRSDKR------VRQGVEFTLFDLQKKMGVMLMFTAPGNDAVVQELGRQVAEFSEGKIEEVTVH 294
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A836CP28_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP28_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.600e-21
Identity = 75/219 (34.25%), Postives = 104/219 (47.49%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDR------------------------------DLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEVHI 567
            +GDAGSGKTT LK LAG E P+ G ++  ++G  R VY+ R+ A     +V   V   +AR  P +    V    + +L  ++L   +  +                                DLSGGEV RF LAMALA G + P PPVLL D F D  D R      VR  VE  +  L    GV ++F+SHS   V+EL+   +  + G+V ++ I
Sbjct:   95 IGDAGSGKTTFLKILAGKESPSSGTVD--ITGDHRMVYLTRHFAHDPRHTVAANVRARIARAAPAQHAEAVAEIADRLLRMVELGAKAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSGGEVLRFGLAMALAAGVAGPEPPVLLCDEFLDHEDQR------VRVRVEGVMRRLLNVHGVGILFSSHSMNTVLELSDAAIVFSNGQVIQMRI 305
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A849Q203_9EURY (ATP-binding cassette domain-containing protein n=2 Tax=unclassified Methanococcoides TaxID=2618147 RepID=A0A849Q203_9EURY)

HSP 1 Score: 74.3 bits (181), Expect = 2.990e-12
Identity = 68/199 (34.17%), Postives = 95/199 (47.74%), Query Frame = 1 
Query:    4 GDAGSGKTTMLKCLAGLERPTLGQIEA-------SVSGL------RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDV---EVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRV 552
            G +GSGKTT L+C+AGLE P  G I         S SG+      RR  YV +N A      VR  +       + G +G D    E     +L  L + G+       LSGG+  R ALA ALA     PSP +LLLD  F   D      + VR  +   +  +Q+++G+ ++F +HS      LA +VV L +G+V
Sbjct:   41 GRSGSGKTTTLRCIAGLEAPERGSIVVNGKTYYDSDSGIDLQPQYRRPGYVFQNYALFPHMDVRKNI-------VYGLKGWDAVKKEARLFEMLRLLHIEGLEGRYPSQLSGGQKQRVALARALA-----PSPDILLLDEPFSALD------MVVRMRLRERIKTIQKELGIPILFITHSPEEAFSLADRVVVLHEGKV 221
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A7C2EDB5_9FIRM (ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2EDB5_9FIRM)

HSP 1 Score: 73.9 bits (180), Expect = 3.830e-12
Identity = 66/202 (32.67%), Postives = 99/202 (49.01%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQIE-------ASVSGL-----RRAV-YVGRNSASLNGRSVRHRVHDEVARHLPGKR--GHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 561
            +G +G GKTT L+C+AGLE PT G++        A  SG+     RR+V  V +N A     +V     D VA  L  ++     +E     +L  + L G+ R     LSGG+  R ALA AL +      P V+LLD      D +      +R  + F L +LQR+MGV +++ +H     M L+ +V  +  GR+ +V
Sbjct:   35 LGPSGCGKTTTLRCIAGLEEPTRGEVRIGGRLVSAPASGIFSPPERRSVGMVFQNYAVWPHMTV----FDNVAYPLRLQKLDRRTIEARVREVLEMVALRGLERRFPAQLSGGQQQRVALARALVR-----RPEVMLLDEPLSNLDAK------LREQMRFELKELQRRMGVPILYVTHDQAEAMALSDRVAVMNAGRIVQV 221
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A1E4LUC3_9PROT (Spermidine/putrescine ABC transporter ATP-binding protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4LUC3_9PROT)

HSP 1 Score: 72.4 bits (176), Expect = 1.320e-11
Identity = 61/194 (31.44%), Postives = 99/194 (51.03%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQI---EASVSG----LRRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 561
            +G +G GKTT L+C+AGL +P+ G+I   +  V+     LR    V ++ A     +VR  +   +A  + G+RG +VE   + +L  +DL   +      LSGG+  R ALA ALA     PSP VLLLD      D        VR  +   +  +Q+++ +  +  +H     + +A +VV ++KGR+ +V
Sbjct:   35 LGSSGCGKTTTLRCIAGLTQPSAGRIFFGDQDVTDVPTRLRPIGMVFQSYALFPNMTVRQNIAFPLA--VRGRRGSEVERRVDELLELVDLVEFAGQHPNQLSGGQAQRTALARALA-----PSPAVLLLDEPLSALDA------VVRLHLRDEIRRIQQQVKITALLVTHDQSEALAVADRVVVMSKGRIEQV 215
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: UPI001AEAAD30 (ABC transporter ATP-binding protein n=1 Tax=Methanohalophilus levihalophilus TaxID=1431282 RepID=UPI001AEAAD30)

HSP 1 Score: 72.4 bits (176), Expect = 1.440e-11
Identity = 65/196 (33.16%), Postives = 92/196 (46.94%), Query Frame = 1 
Query:    4 GDAGSGKTTMLKCLAGLERPTLGQIEA-------SVSGL------RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRV 552
            G +GSGKTT L+C+AGLE P  G I+        S SG+      RR  YV +N A      V+      +   L G    + +     +L  L + G+       LSGG+  R ALA ALA     P P +LLLD  F   D      + VR  +   +  +Q+++G+ +VF +HS      LA +VV L  G+V
Sbjct:   41 GRSGSGKTTTLRCIAGLETPDSGYIDVNGQTYYESKSGINLQPQYRRPGYVFQNYALFPHMDVK----QNIVYGLKGWGKSEKDERLREMLELLHIEGLEDRYPSQLSGGQKQRVALARALA-----PKPGILLLDEPFSALD------MVVRMRLRERIKIIQKELGIPVVFITHSQDEAFSLADRVVVLHNGKV 221
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: UPI001BDCD7CF (ABC transporter ATP-binding protein n=1 Tax=Nonomuraea sp. H16431 TaxID=2835864 RepID=UPI001BDCD7CF)

HSP 1 Score: 72.0 bits (175), Expect = 2.660e-11
Identity = 70/203 (34.48%), Postives = 94/203 (46.31%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQI------------EASVSGLRRAVYVGRNS-ASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTR----DRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTE 558
            VG +GSGKTT+ +CLAGL RP  G I            + S    RR  YV +N   SLN    R RV DEVAR     RG   + A    L  LDL  + R         LSGGE  R A+A ALA G     P VL+ D      D      ++V+  +   L DL+ ++ + ++  +H   +V   A +V  L +G + E
Sbjct:  358 VGQSGSGKTTIARCLAGLHRPDAGTITLDGVPLAARARDRSAEQRRRIQYVFQNPHESLN---PRRRVADEVARPARVLRGRSRDAARAEALDLLDLVRLPRRTAGLYPDQLSGGERQRVAIARALAAG-----PEVLICDEVTSALD------VSVQAAILELLADLRDELDLAMLLITHDLGVVAVAADRVAVLERGVLCE 546
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A1H9ZPK6_9EURY (Molybdate transport system ATP-binding protein n=2 Tax=Methanococcoides TaxID=2225 RepID=A0A1H9ZPK6_9EURY)

HSP 1 Score: 71.6 bits (174), Expect = 2.670e-11
Identity = 67/199 (33.67%), Postives = 93/199 (46.73%), Query Frame = 1 
Query:    4 GDAGSGKTTMLKCLAGLERPTLGQIEA-------SVSGL------RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDR---DLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRV 552
            G +GSGKTT L+C+AGLE P  G I         S SG+      RR  YV +N A      VR  +       + G +G D E     +   L L  +    DR    LSGG+  R ALA ALA     P+P +LLLD  F   D      + VR  +   +  +Q ++G+ ++F +HS      LA +V+ L  G+V
Sbjct:   41 GRSGSGKTTTLRCIAGLETPESGSIVVNDQTYFDSSSGVNLQPQYRRPGYVFQNYALFPHMDVRKNI-------IYGLKGWDKEKKEERMFEMLRLLHIEGLEDRYPSQLSGGQKQRVALARALA-----PNPGILLLDEPFSALD------MVVRMRLRERIKAIQNELGIPVLFITHSPEEAFSLADRVIVLHNGKV 221
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A7C5RQR8_9CHLR (ABC transporter ATP-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C5RQR8_9CHLR)

HSP 1 Score: 71.2 bits (173), Expect = 3.310e-11
Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQIE---ASVSGL----RRAVYVGRNSASLNGRSVRHRVHDEVARHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDT--RRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTE 558
            +G +GSGKTT+L  LAGLERPT G++    A V+ L    R   ++ +N A     SVR  +   +   L G    + E     +   LDL G+   R  +LSGG+  R ALA ALA+      P +LLLD      D   RR     +R         LQR+MG+  ++ +H     M +A ++  L +GR+ +
Sbjct:   34 LGPSGSGKTTLLLLLAGLERPTAGEVRFNGAVVNSLPPRDRAVGFLFQNYALYPNMSVRENIAFPL--RLKGVSKKERERTVLELAEMLDLRGLLERRPSELSGGQQQRVALARALAR-----QPRLLLLDEPLSNLDPILRRSAREEIRL--------LQRRMGLTTIWVTHDQDEAMTVADKLAVLKEGRLVQ 213
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BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Match: A0A0S8JI30_9BACT (ABC transporter domain-containing protein n=3 Tax=candidate division TA06 TaxID=1156500 RepID=A0A0S8JI30_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 7.010e-11
Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 
Query:    1 VGDAGSGKTTMLKCLAGLERPTLGQI---EASVSGLRRAVYVG---RNSASLNGRSVRH---RVHDEVARHLP-GKRGHD-VEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALAQGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLVFTSHSYRIVMELAKQVVELTKGRVTEV 561
            +G +G GK+T+L  +AGLERPT G+I   +  V+  RR V++    RN A +      +    V + +A  L  GK+G   VE     +   L++  + R R  +LSGG+  R A+A A+ +      P V LLD      D R      +R  +   L +LQR++G+  V+ +H     M LA ++  + +GR+ +V
Sbjct:   38 LGPSGCGKSTILNLIAGLERPTTGEIRFDDVIVASGRRKVFLSPKERNVAMVFQSYALYPHLSVFENIAFPLRIGKQGATGVEETVGEVAAMLEISDLLRARPAELSGGQRQRVAIARAIVR-----HPKVFLLDEPLSNLDAR------LRLAMRGELKNLQRRLGITTVYVTHDQVEAMSLADRIAVVRQGRIEQV 224
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13248.2324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHR7_ECTSI3.010e-6560.94ABC-type spermidine/putrescine transport system, A... [more]
A0A836CP28_9STRA1.600e-2134.25P-loop containing nucleoside triphosphate hydrolas... [more]
A0A849Q203_9EURY2.990e-1234.17ATP-binding cassette domain-containing protein n=2... [more]
A0A7C2EDB5_9FIRM3.830e-1232.67ABC transporter ATP-binding protein n=1 Tax=Firmic... [more]
A0A1E4LUC3_9PROT1.320e-1131.44Spermidine/putrescine ABC transporter ATP-binding ... [more]
UPI001AEAAD301.440e-1133.16ABC transporter ATP-binding protein n=1 Tax=Methan... [more]
UPI001BDCD7CF2.660e-1134.48ABC transporter ATP-binding protein n=1 Tax=Nonomu... [more]
A0A1H9ZPK6_9EURY2.670e-1133.67Molybdate transport system ATP-binding protein n=2... [more]
A0A7C5RQR8_9CHLR3.310e-1133.33ABC transporter ATP-binding protein n=1 Tax=Chloro... [more]
A0A0S8JI30_9BACT7.010e-1131.31ABC transporter domain-containing protein n=3 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13248contigH-elongata_contig13248:3882..8128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionABC transporter-like
Ec32 orthologEc-07_006520.1
Exons5
Model size585
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13248.2324.1prot_H-elongata_contig13248.2324.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13248 3882..8098 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929786.4195664-CDS-H-elongata_contig13248:3881..40501622929786.4195664-CDS-H-elongata_contig13248:3881..4050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 3882..4050 -
1691679157.1746624-CDS-H-elongata_contig13248:3881..40501691679157.1746624-CDS-H-elongata_contig13248:3881..4050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 3882..4050 -
1622929786.4490333-CDS-H-elongata_contig13248:6075..62131622929786.4490333-CDS-H-elongata_contig13248:6075..6213Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 6076..6213 -
1691679157.1933658-CDS-H-elongata_contig13248:6075..62131691679157.1933658-CDS-H-elongata_contig13248:6075..6213Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 6076..6213 -
1622929786.4750245-CDS-H-elongata_contig13248:6576..66511622929786.4750245-CDS-H-elongata_contig13248:6576..6651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 6577..6651 -
1691679157.2047908-CDS-H-elongata_contig13248:6576..66511691679157.2047908-CDS-H-elongata_contig13248:6576..6651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 6577..6651 -
1622929786.4906523-CDS-H-elongata_contig13248:7304..74201622929786.4906523-CDS-H-elongata_contig13248:7304..7420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 7305..7420 -
1691679157.2160392-CDS-H-elongata_contig13248:7304..74201691679157.2160392-CDS-H-elongata_contig13248:7304..7420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 7305..7420 -
1622929786.5153122-CDS-H-elongata_contig13248:8041..80981622929786.5153122-CDS-H-elongata_contig13248:8041..8098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 8042..8098 -
1691679157.2235367-CDS-H-elongata_contig13248:8041..80981691679157.2235367-CDS-H-elongata_contig13248:8041..8098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13248 8042..8098 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929786.531181-UTR-H-elongata_contig13248:8098..81281622929786.531181-UTR-H-elongata_contig13248:8098..8128Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13248 8099..8128 -
1691679157.2315207-UTR-H-elongata_contig13248:8098..81281691679157.2315207-UTR-H-elongata_contig13248:8098..8128Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13248 8099..8128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13248.2324.1

>prot_H-elongata_contig13248.2324.1 ID=prot_H-elongata_contig13248.2324.1|Name=mRNA_H-elongata_contig13248.2324.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MLKCLAGLERPTLGQIEASVSGLRRAVYVGRNSASLNGRSVRHRVHDEVA
RHLPGKRGHDVEVATNAILGALDLHGVSRTRDRDLSGGEVYRFALAMALA
QGCSSPSPPVLLLDGFFDKSDTRRGQTIAVRYGVEFALFDLQRKMGVMLV
FTSHSYRIVMELAKQVVELTKGRVTEVHIYIIST*
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mRNA from alignment at H-elongata_contig13248:3882..8128-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13248.2324.1 ID=mRNA_H-elongata_contig13248.2324.1|Name=mRNA_H-elongata_contig13248.2324.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4247bp|location=Sequence derived from alignment at H-elongata_contig13248:3882..8128- (Himanthalia elongata Himel1 dioecious)
GTTGGAGACGCAGGGTCGGGAAAGACGACGATGCTCAAGTGCCTGGCGGG
GCTAGAGCGGCCCACTTTGGGGCAAATCGAGGCAAGTGTAAGCGATCAAT
CGATCAAACTAGATCACCTCTTCCCTCACCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCGCAACCACTTCTTTTTTTTTTCTGCCCCCCCCCT
ATANNNNNNNNNNGGGGGAAAAACCGGGCAAAGGGCAACCAAAAAACCAT
CAAAACCACTCCCCCTTCCCCTCCCCCCCCCCCCCCCCCCCCGAAACGCC
TTCTTGGCAAGGTATACCTTTTGTTTGTCGGGCACCACTCCTTACAAACA
TGCCATCGAGGTTGAGGGATTATTTCTTTAGCGGGGAGTTCAGTGTGTTG
GAGGCATTACGCCACCCAAGTAAACGAGGAGGGGCTCTACCGCCAGATGC
GTGTCCTCCCCAACCCCCGCCTCTCGCGTGGGGCCGACCTCGAATCAGCC
TTAATCGATGACCTACCTATTAGAATACTATATTTGAGAATGTTTGTATT
GTGTGTATGTGTTACGCGCCACCGTAGCCGCGCCACAATATCGCGAGATG
GACTTCCCGCGTCCGCGAAGCCTTGTGCACCGCGGCGTTTTCCTCGCCCT
TATGTCTCTGTCGTGTCGCTAGACTCGGCTGTCGCTGTTCGTCTTCTTCC
TCCTCCAGGTGAGTGGCCTCAGGAGGGCGGTGTACGTCGGACGGAACAGC
GCTAGCTTGAACGGGAGGAGCGTTCGCCATCGTGTGCATGACGAGGTCGC
GCGACATCTGCCCGGCAAGCGTGGGTGCGCCAACCGTCCTCCGCCCTTCC
ACCCCTCCCCTTCCGTCCCATCATCCCCCCACCCCACCTGGCACACAAGA
CCCCGGTGATGGAAAAAATCGAGCGAGAATACCGGAGGCTGGCTTATTGA
CTTGAGTTTGTCCACCTACAACGTATATACATACATACATACATATATAC
GTATATATATTGATCCCCCCCTAGGAGGGTCAATACGAGTGGCATAGAAT
GACTAGGACGACAGGGCTAGATTGCGCGGTTATGTGCAATTTAATAAATA
TACATTGTCGCGTTTGATCAGAGGTTTTCGCAATAAGTATCATTGATCTC
CCCCCTAGGAGGATCAATACGAGTGGCATAGAATGACTAGGACGACATGA
CCGGATTGCGCGGTTATGCGCAATTTAATAAATATACATACAAACATACA
TACATACATACATACATGCATATAAAAGTGTGATAGATATACATGTCCAT
TTCTGCGTCGACCGTGCCTCCGCGGTTCAACCGCTACCGGAAGAAGATGT
GGATCGTTCCCGGGTGAGGGATGGGAGCGGGGGGAGAGGGGAAAATTTCA
CCGACCGCTTTTGCGACGGAACGACTCGGGCGCACGCAAACCTTCCCGTC
TGCCTGTCTACCTCGAATTTTTGGCAGACACGACGTGGAGGTAGCGACCA
ACGCCATCCTCGGGGCCTTGGATCTCCACGGGGTCAGCCGGACTCGTGAC
AGGTGCTGGATTGTCGATGTTTCTTGTTTTTACAGGTAGTTACGTAATAG
AAGCCCCCCTCCCTTCCCACCCCGTACCCCTACCCTAACTTAAGGAGGCG
TGTATGGGCTGCATGCGCGTTTCTAAGTGGCAGTGACAGTGGCAGGACAC
CCCGAACCCGAATCAAATCTACATCCTATATATATATATATATATATTAG
TGGATGTATTTTGCAAAAATGTCGTCTTTCGCGGAACAACCGAACCGAAC
CGAACCGAAATGAACAGTTGCGAACCGAACCGGCTTTTGTGGCATCGTCA
TCTGGACAGCCGAATATCGCCCCTGCTCTTTTTGTTTCTCCTTCCCGCGG
CGGTGATGGCTGTAGGGATCTCAGCGGTGGGGAGGTATACCGCTTCGCGC
TGGCGATGGCCCTCGCGCAAGGGTGCTCTTCTCCCTCGCCCCCCGTCCTG
CTCCTGGACGGCTTCTTCGACAAGAGCGACACAAGGCGAGGACAGACAAT
AGCGTCACGAGGCGTGGGCTCGGCGGTGGTAGCCGTAGTCGTAGCCGTGG
TGGCAGCCTCGAGTGCCGCCGTAAATATCGGGAGGGTTTTACTTCTGATT
GCGCCATTAGCTGTTTCAAGCCCGCTCGGGACTTCTTATTTCGGGGTTAA
GGTTGAGTGGAGTTGAATGGAGGCAGCGGAAGGACGGGGACGGGGGGAGG
TGAACCGATTCGATTCTCCCTTTTCCATTCTATGCCTTATCTCGATCAGT
GAAGTAAATTATACTGTAGTAGTAATTATTATTATTATTATTATTATTAT
TAATTAAAAACCCTTGAACTCATATTGTGCCAGAAGATAACATACACCCC
AGGGATCTAGCCCTCGATATAGTTAGGGGAACTACCCCCAGCCAGTCATC
GATGGACGTCCTGTTGGGGGTTAGATTCTATGCATCCTTGAGAAACGCAT
AAGTCAACATCGAAATCATAGGCTGTGGACTCGATGCAATTTTCATTGTG
GAAGACGGTTAACCACATATCACGAGTTTGAGCTCATAGGTGGCAGTGTA
CGCACTCAAGCCTGACGATAGTTGGTCATAGTCCCCTTACTGGACTATGA
CTGCCCCTCTCATAATGTATAGAAGGAGTGGATGTTCGCAGGGTTAGAAT
GAGTTCATACATGTGTGTTTTTTTTTACCATATCGCACACGTCCACTGTA
CATACAAATAGTGGGTGTAGGAAAAGAGAGACGTACAATAAGTGGTTCAC
ATGGGGTTACCTGAATAGGCTTCACCCGTTACTCAAGCTACCCTTAAGGA
CTATTGGCTCAGCGCCGGCGGACTCTCGGTGGTAAACGCCATCGGTACGC
AATTGCGAGATCTTATAAAATAGGGATTGGTCCGATGGAGGTTGCCGGTA
GAGATGGACACCGTCGCGGAAAACGAGAGGATCCCGAGAGTACGCACCAG
ATTCAGCCTGGGTTGAGAGAATGAGCAGACTGGCACGGGACGGGACTGCC
GAACCCCTCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACAGGGACA
ATTATTTTTCCTGTTCAGCTGACCACAAGCAGGAGGCAACCATATCCGGT
TGATCTATACTAAAGCCTATATACTCTGCTCTTTGTGATGATCACAGCTT
AAAAAAAACAAACAGCCATATATATATGTGGTCATTACATATAGGCTTTA
GAATAGATCAACCTGATTTGATTGCCTCCTGCTCGTGGTCAGCTGAATAG
GGAAAATGATGTTTCCTTGTTCCCGTTCGCGTCTGAGAATGTTGTCTCGC
GAGACGAGTTCAGCAGTCCCGTCCCGCGTCAGCCTGCTCATTCTCCCAAC
CCAGGCTGAATCTAGTGCGTACTCCCGGGATCTTCTCGATCCTCTCATTT
TCCGTGACGGCGTCCATCTCTACCGTCAACCGCCATCGGACCAATCCCGA
TTTTGTAAGATCACGCAATTGCGTACCGATGGCGTTTTCCACCGAGAGTC
CGCCGGCACTGAGCCAGTAGTTCTCAAGGTACCTTAAGTAACGGGTGCAG
CCTATTCAGGTAACCCCATATGAACCAATTATTGTGCGCCTCTATTTTCC
TACACCCACTATTTGTACAGTTGATGTGTGCGATATGGTATATACTACAG
AGATTGTCCGAGGCGGTTGTTGATTGAATGTTTTTCATGTATTAATATTT
AATAGTGTAGTATAGTACTCCGGTATATATTTACTTCTTTTATGCTTTTA
CTTTTAGATTTATGTATTTCTCTATTTATTGTAGGGTTTTTTTCACGAAT
ATTTTTTACCTATTTATCTAGAGCCTGTGTACTGTTGTTTTCTTGGGGTT
CTTTTTACTGACATATCTTAAAAATATAAAATATAAAAATGAAATCAGTC
AAACCTTGTTATTTTTTATTTATTTATTTATTTATTTATTTATTATTATT
TATTTTTTTTACTTCTTTATTTACGCAAGGAAATTGAATTATTGATCAAA
TCCTTGATATATTCGTTTTGGCCCGCAGAGTGCGGTACGGGGTCGAGTTC
GCCCTGTTCGACCTTCAGAGGAAGATGGGTGTGATGCTCGTGTTCACGTC
TCACAGCTATCGGATTGTCATGGAGCTCGCCAAGCAGGTCGTTGAGCTCA
CGAAGGGGAGAGTAACGGAGGTACATATCTACATAATATCTACATAA
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Coding sequence (CDS) from alignment at H-elongata_contig13248:3882..8128-

>mRNA_H-elongata_contig13248.2324.1 ID=mRNA_H-elongata_contig13248.2324.1|Name=mRNA_H-elongata_contig13248.2324.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig13248:3882..8128- (Himanthalia elongata Himel1 dioecious)
ATGCTCAAGTGCCTGGCGGGGCTAGAGCGGCCCACTTTGGGGCAAATCGA
GGCAAGTATGCTCAAGTGCCTGGCGGGGCTAGAGCGGCCCACTTTGGGGC
AAATCGAGGCAAGTGTGAGTGGCCTCAGGAGGGCGGTGTACGTCGGACGG
AACAGCGCTAGCTTGAACGGGAGGAGCGTTCGCCATCGTGTGCATGACGA
GGTCGCGCGACATCTGCCCGGCAAGCGTGGGTGAGTGGCCTCAGGAGGGC
GGTGTACGTCGGACGGAACAGCGCTAGCTTGAACGGGAGGAGCGTTCGCC
ATCGTGTGCATGACGAGGTCGCGCGACATCTGCCCGGCAAGCGTGGACAC
GACGTGGAGGTAGCGACCAACGCCATCCTCGGGGCCTTGGATCTCCACGG
GGTCAGCCGGACTCGTGACAGACACGACGTGGAGGTAGCGACCAACGCCA
TCCTCGGGGCCTTGGATCTCCACGGGGTCAGCCGGACTCGTGACAGGGAT
CTCAGCGGTGGGGAGGTATACCGCTTCGCGCTGGCGATGGCCCTCGCGCA
AGGGTGCTCTTCTCCCTCGCCCCCCGTCCTGCTCCTGGACGGCTTCTTCG
ACAAGAGCGACACAAGGCGAGGACAGACAATAGCGGATCTCAGCGGTGGG
GAGGTATACCGCTTCGCGCTGGCGATGGCCCTCGCGCAAGGGTGCTCTTC
TCCCTCGCCCCCCGTCCTGCTCCTGGACGGCTTCTTCGACAAGAGCGACA
CAAGGCGAGGACAGACAATAGCAGTGCGGTACGGGGTCGAGTTCGCCCTG
TTCGACCTTCAGAGGAAGATGGGTGTGATGCTCGTGTTCACGTCTCACAG
CTATCGGATTGTCATGGAGCTCGCCAAGCAGGTCGTTGAGCTCACGAAGG
GGAGAGTAACGGAGGTACATATCTACATAATATCTACATAAAGTGCGGTA
CGGGGTCGAGTTCGCCCTGTTCGACCTTCAGAGGAAGATGGGTGTGATGC
TCGTGTTCACGTCTCACAGCTATCGGATTGTCATGGAGCTCGCCAAGCAG
GTCGTTGAGCTCACGAAGGGGAGAGTAACGGAGGTACATATCTACATAAT
ATCTACATAA
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