mRNA_H-elongata_contig13230.2318.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13230.2318.1
Unique NamemRNA_H-elongata_contig13230.2318.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 8.710e-45
Identity = 84/159 (52.83%), Postives = 116/159 (72.96%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHA-GVYFLDKMTIADVLFATVMAMLKSGKYATIPPNVIDA-HPKLVALAESIMAQPKIAEFIAK 1242
            P+ PNGQLPVLEVDGY LPQS+ ILRYVGKL GL+P+D LEAAKCDAV+D+  D +  +RP   E+D+AK++EM  +   +YIP WL N+EK++    G+YF +KM++AD++  T +  L+ G Y  +P  + D+ +P L AL +SI+ +PKIA FIAK
Sbjct:   45 PSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAEKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAK 203
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BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.140e-44
Identity = 79/158 (50.00%), Postives = 117/158 (74.05%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHA-GVYFLDKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIAK 1242
            P+ PNGQ+PVL +DG+ L QS+AILRYVGKL GL P+D L AAKCDA++D V+DL   +RP   E+DEAKKMEM+A+  +++IP WL NMEK++    G +F DKMT+AD++ A  +  +++G    IP  + D++P L A+ ++++++PK+A F+AK
Sbjct:   45 PSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFDKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAK 202
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 8.820e-35
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAG-VYFLD-KMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEF 1233
            P  PNGQLP+LEV G  LPQS A LRYVGKLAGLYP D LEAA  DA +DSV D    L P ++++D+ ++MEM+      ++PTWL N+EK + +AG  YF   K++I D+     +  LK G    IP +++D +P L AL E + A+P IA++
Sbjct:   47 PGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKY 202
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 4.810e-30
Identity = 67/157 (42.68%), Postives = 99/157 (63.06%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAG-VYFLD-KMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFI 1236
            P+ P  QLP LEV G  +PQS+A +RY+GK+ GLY  D +EAA  DA +++V D+   LRP + EQD AKK+EM+     +Y+PTWL N+E+ +  AG  YF   K++I D+     +  LK G    IP  ++D  P L AL +S+M++ KI +++
Sbjct:   45 PSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYL 201
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 9.170e-30
Identity = 66/163 (40.49%), Postives = 102/163 (62.58%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAG-VYFL-DKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIAKTGSK 1254
            P  P  Q+PVLEVDG  +PQS+AILRYVGK+  LYPTD ++AA  D+  D+VSD+   +R II E+D  KK +++ +   + +PTWL N+EK +  AG  YF  DK++I D+     +  L  G +  +P  ++D  P + +L + +MA+P+I  ++ +   K
Sbjct:   44 PTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 3.120e-27
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKI---GHAGVYFLDKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIAK 1242
            P  P G +P L +      QS AILRY GKLAGLYPTD +EA   D ++D++ D+F  ++P ++EQDE KKMEM+       +P WL    K I   G +G    D +TIAD+   T++ +L SG    IP  + +  PK+ AL E + A  K+  F AK
Sbjct:   43 PKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFEAK 202
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 6.640e-27
Identity = 61/150 (40.67%), Postives = 94/150 (62.67%), Query Frame = 1 
Query:  793 LPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAG-VYFL-DKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFI 1236
            +PVLEVDG  +PQSVAILRYVGK+  LYP D ++AA  D+ +D+VSD+   +R II E+D   K +++ +   + +P WL N EK +  AG  YF  DK++I D+     +  L  G +  +P  +++  P L +L + IMA+P+I  ++
Sbjct:    1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYM 150
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: A0A1V9YVK9_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVK9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.810e-25
Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIG-HAGVYFL-DKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIA 1239
            P  P  Q+PVL VDG  L QS A+ RY G+LAGLYPTD LEA + D ++ +  D  + L P  REQD AK++ ++ E  +  +P     +E ++  H G YFL D +TIAD+       ML SG    IP +++DA+P+  A+A+++ A PK+A + A
Sbjct:   46 PTLPFKQVPVLTVDGEVLAQSHAMARYAGRLAGLYPTDALEAFRVDEILAASDDTLAKLMPSFREQDAAKRLVLREELSAGPLPEHFACIEARLAAHKGPYFLGDALTIADLELYGSRQMLSSGWLDGIPTDILDAYPRWNAIADAVAAHPKVAAWEA 203
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.560e-24
Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 1 
Query:  772 PAFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAG-VYFL-DKMTIADVLFATVMAMLKSGKY-ATIPPNVIDAHPKLVALAESIMAQPKIAEFIAKTGSK 1254
            P  P  Q+PVLEVDG  +PQ+ AILRYVGK+  LYPTD ++AA  D+  D+V+D+   +R I  E+D   K ++  +     +P WL N+EK +  AG  YF  DK++I D+     +  L  G +  ++P  +++  P L +L + +MA+P+I  ++ +   K
Sbjct:   44 PTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207
[Close]
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.620e-24
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 1 
Query:  775 AFPNGQLPVLEVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRPIIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAGVYFL--DKMTIADVLFATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIA 1239
            + P  QLPVLEV+G    +S+AILRY GKL+GLYP+D +EA KCD +ID +    + +   IRE D  KKM+M+ E  S  +PT    +E+++   G  F   D++TIAD+     +  L  G    IPP+ ID   K+ A+ E+     K+AE+ A
Sbjct:   53 SLPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYA 209
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13230.2318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B1N8E8_9PHAE8.710e-4552.83Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
A0A6H5KRV2_9PHAE2.140e-4450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1N8E7_9PHAE8.820e-3547.44Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E6_9PHAE4.810e-3042.68Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
D8LHF0_ECTSI9.170e-3040.49Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A061SAH2_9CHLO3.120e-2741.25Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
A0A6H5JAZ7_9PHAE6.640e-2740.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9YVK9_9STRA1.810e-2541.77Glutathione S-transferase n=1 Tax=Achlya hypogyna ... [more]
D8LK37_ECTSI1.560e-2437.20Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A7S2V6C7_9STRA4.620e-2440.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13230contigH-elongata_contig13230:1173..7847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score115.9
Seed ortholog evalue2.1e-23
Seed eggNOG ortholog946362.XP_004994854.1
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K04097
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko01100,ko05204,map00480,map00590,map00980,map00982,map01100,map05204
EggNOG free text desc.Glutathione S-transferase, C-terminal domain
EggNOG OGs3A52M@33154,KOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size4037
Cds size603
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929785.7348402-UTR-H-elongata_contig13230:1172..14431622929785.7348402-UTR-H-elongata_contig13230:1172..1443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 1173..1443 +
1691679156.862319-UTR-H-elongata_contig13230:1172..14431691679156.862319-UTR-H-elongata_contig13230:1172..1443Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 1173..1443 +
1622929785.747072-UTR-H-elongata_contig13230:1627..20101622929785.747072-UTR-H-elongata_contig13230:1627..2010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 1628..2010 +
1691679156.9084678-UTR-H-elongata_contig13230:1627..20101691679156.9084678-UTR-H-elongata_contig13230:1627..2010Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 1628..2010 +
1622929785.8348796-UTR-H-elongata_contig13230:4999..71761622929785.8348796-UTR-H-elongata_contig13230:4999..7176Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 5000..7176 +
1691679156.9816918-UTR-H-elongata_contig13230:4999..71761691679156.9816918-UTR-H-elongata_contig13230:4999..7176Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 5000..7176 +
1622929785.8461928-UTR-H-elongata_contig13230:7244..78471622929785.8461928-UTR-H-elongata_contig13230:7244..7847Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 7245..7847 +
1691679156.9905665-UTR-H-elongata_contig13230:7244..78471691679156.9905665-UTR-H-elongata_contig13230:7244..7847Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13230 7245..7847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929785.759426-CDS-H-elongata_contig13230:2010..22241622929785.759426-CDS-H-elongata_contig13230:2010..2224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 2011..2224 +
1691679156.9317648-CDS-H-elongata_contig13230:2010..22241691679156.9317648-CDS-H-elongata_contig13230:2010..2224Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 2011..2224 +
1622929785.7736633-CDS-H-elongata_contig13230:3155..32711622929785.7736633-CDS-H-elongata_contig13230:3155..3271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 3156..3271 +
1691679156.942321-CDS-H-elongata_contig13230:3155..32711691679156.942321-CDS-H-elongata_contig13230:3155..3271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 3156..3271 +
1622929785.7882512-CDS-H-elongata_contig13230:4139..41801622929785.7882512-CDS-H-elongata_contig13230:4139..4180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4140..4180 +
1691679156.9510505-CDS-H-elongata_contig13230:4139..41801691679156.9510505-CDS-H-elongata_contig13230:4139..4180Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4140..4180 +
1622929785.8082137-CDS-H-elongata_contig13230:4510..45681622929785.8082137-CDS-H-elongata_contig13230:4510..4568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4511..4568 +
1691679156.9613585-CDS-H-elongata_contig13230:4510..45681691679156.9613585-CDS-H-elongata_contig13230:4510..4568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4511..4568 +
1622929785.8189642-CDS-H-elongata_contig13230:4825..49991622929785.8189642-CDS-H-elongata_contig13230:4825..4999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4826..4999 +
1691679156.9720404-CDS-H-elongata_contig13230:4825..49991691679156.9720404-CDS-H-elongata_contig13230:4825..4999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13230 4826..4999 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13230.2318.1prot_H-elongata_contig13230.2318.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13230 2011..4999 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13230.2318.1

>prot_H-elongata_contig13230.2318.1 ID=prot_H-elongata_contig13230.2318.1|Name=mRNA_H-elongata_contig13230.2318.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MLNCICVIFVSPTAFFRNHPRSVLTPPGLHPPLCTPCPTPAFPNGQLPVL
EVDGYPLPQSVAILRYVGKLAGLYPTDYLEAAKCDAVIDSVSDLFSVLRP
IIREQDEAKKMEMKAEAESSYIPTWLDNMEKKIGHAGVYFLDKMTIADVL
FATVMAMLKSGKYATIPPNVIDAHPKLVALAESIMAQPKIAEFIAKTGSK
*
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mRNA from alignment at H-elongata_contig13230:1173..7847+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13230.2318.1 ID=mRNA_H-elongata_contig13230.2318.1|Name=mRNA_H-elongata_contig13230.2318.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6675bp|location=Sequence derived from alignment at H-elongata_contig13230:1173..7847+ (Himanthalia elongata Himel1 dioecious)
GGTAATTCGAGCCCGCGTGCGATCGTCCTCTTCCCCGCTGCTGCCGGCGG
TGCGGGGATGACTTCGGCTATTTTACAGCATACACTAACTTGCGAAATTA
TGTTCTTCGAATACTATTTAGAGAAGCTGCAGAAGTCTCTGGGCTGTACA
TTTCTAAATAATATGGGAACTCTAAAATTCTGATACGGTTCTGTGGCAAA
AAACCCCGAGGGAACAGGAGGAAAAAAAATCAAGCCATTAGTTGGTTGTT
CAAAAGTGCTAAACTTATATCGCGATAAAAAAAAGAAGGCGTTAATCATT
CAAGGAGAGATGGGTCCGTTAGGGCCGCATGCTATGACAGGATGACAGAT
AGGCAATGCTGCAGTATATGAGATTGGTAAGTAACTAAGCTGCTAGTAAT
AGCGCGTTCGTTGAATAGTACCCAATACCCCATCGGGGGAAAAAGAAAGG
ATGAGATTGAACGAAAATAATGAGATAAAGAAACCGAGCATCCCAGGCCA
AGTTGCACCCCAGGACAGGTATTTCGTTGGTTTGAACCGGTAAGAAGGAA
AATTCATTCTAGTGTGTGCAGGCGTGTGCTGTTGTTGCTTATTACGCCGA
TAATGCAAGAATTCACAGTTGAACCGGTGGTCGTGCATTACCCGGGTGCG
TGAGCTTTCACCCTTGGCAAAAAAAGTGGAATTTTTTTCTTCTTCAGAAC
TTGTCCCCGGAAGAGTTTTTGCGGGTCATAGCGGGTGTTTGTGCAAGTGT
GTGTGTTCTTCACGGGAAAGAAGGCTGATGCCTCCCCCTACCAAGACGTT
ACCGTCAAAAACTGCTGCGCCCTCAAGAGTTAACCAAAATGCTTAATTGT
ATTTGTGTAATATTCGTGTCTCCTACCGCGTTTTTTCGCAACCATCCGCG
TAGCGTTCTAACCCCCCCTGGTCTCCATCCCCCTTTGTGCACACCTTGTC
CCACCCCAGCATTCCCAAACGGTCAGCTACCTGTTCTCGAAGTTGACGGC
TACCCTCTCCCCCAGAGCGTGGCCATCCTTCGGTACGTCGGCAAGCTTGC
AGGTGAGCGAGACGGGCGTGTTTCCGAAGGCTACTTGTTGATTTATTTCT
TGAAAGCTCTTGGGTTGCTTTCGGGTGATGACGGCCCACAACCAACGCCA
CGTTTAACACCTATTAGTAGGTGTGAAAGGATCCTCTCGGAGGGCTAACG
TCTAGATACCAACTGCTGCGTTTGCTTCCGTCCTTAAAGGTACTATAGTA
CCCAATGCGGACACAACGCACAAATCATGTCGCCAGTAGGGTGAATAAAG
CAGTCAGTCGCCCTCGTTGTTGGGTTGGCGGCTGTCAAGGCTGGTGACGA
AATCACGACGACAACGCTTTTCTACGCTGCAAAAAGCTTTTTTGACATCA
TTATCAGCACTCCAGTAGTCATCGCAGCACTGAAGCGCTTGGCTCTTGGC
ACATTCAGAACGACTGAATGATAAGTGGTGCTTGATGAATAGCTAGTGAA
CAGCTGAACGGCTGGATGCCTAGTGAACGGTTGAACTGCCGGATTGTCTA
GTGAACGACTGAATGTACATTGAATGGCAAATATATACCCCTTCGGTTAC
AAGCAATATACCTCCAGTTGTTTGAGACAATATCGCTTTCCCAACATGTT
TGTGTGTTGGTATCGGGTCAAGATGATTTGGCTGGAAAACGAACCCGAGC
ACTTGGGGAAATATCATACTGTTTTCAAGATGTGGTGCGTGGTAACTGAT
CAATTCGGGTTAAACATCATTGTTTCCAGATAGATACACAAAGCCAGATA
GGCCCAATGACATCTCACAATAAATCTAATAATCGATCAATAATTCATAT
TACACGGTAAATACATATACATACGCGCTACAAGATGTTTTGCGCTATTA
CGTACGATTAACGTTCGGGGGATGCTATAACAAACAATTTGCATTTATAT
CTTCTCGTAAATCTCTGCTCACAACGCACACAGGCCTCTACCCAACCGAT
TACCTCGAGGCTGCAAAGTGCGACGCCGTGATCGATTCCGTCTCCGATCT
TTTCAGTGTCTTGCGCCCGATAATAAGGGAGCAGGACGAAGCCAAAAAGG
TGAGCCATATAATTACCTAGCTAATGCACCGTGTCGTGGTCCCATGGCCG
ACGATGGTGGAAATATATCACGCCAACGCATCGTACCCTTTTCAAGTTCA
AGTATATATTGTGTTTGTCTCGGGTTATTGTTTCTGTGAGACAGAGGGTC
GAGTGCACTCCATCCACGGTTCGACAGCAATGCGCACGTGACGAATGATG
GTCCCTCATTGGACGAGGTACCAGTGTTAGCTGGGGTCGAGACGGACGGC
TGTGTAAAGCTGCGATTCGAGGCGACCGGATATCCAGTCATGACAGTAAC
GTCGAAGTAGCGAAGAACGCGAGGTTTCTCGTATTTTGATGATTGGTTTA
AAAACGATGTGTGGGTATCCGAAAGGCGGGAGGTGTCAAAATACGAAAAA
ATAATATTTTTATTTTAAAAAAACTTGAACTAATTTCAACCCTCCGAACA
TCCACAAAAGAGACGTGCTGAACTTCCGATTTACCAGCAACAAATAAATC
ATGTTCGAAGGGAGTAGGTTTTCAGGGATCCCCCCGTGAATAAGGTAGAA
CGAGGTAAGACTATTCCCCGCTTCTGTGTTTGAGTATAAACAACGAAGAA
AATCACCCCCGCGAGTGGACAGCACACAACTGTTTCGGAACCGATTAGTG
CGGTCGTTGCCGCGCTCTTTGTCCCTCTGCTCTTAAAACCCCCCCAAAAA
ACAAGGATCGAGTACGTCGTCTCTATCCTTTATTTGATGGCTCCTTGTGT
GAATTCCCTAACCTCCATATCCACGCATGTTTGTTATAACCCGTCCCCCG
GCCCTCCCCGAACACACGTGTTTCATTTTTTGTTTCCACCAAACCTCACA
TTTTAATTTCGCTCAAGATGGAGATGAAAGCGGAGGCTGAGTCCAGCTAT
ATCCCCACGTGAGTCTATCCGAGCGAACTCTATACCGCCTCATCCCGTGT
GTACTTGCTTGCTTGGCGTATTTGTGGGGAATTGCCCACGCATCAACAAA
AGCTTGCCACGGTAGCACTGCTCGGTTTTCCAAGTCGTGCAATGTTCTTC
CACCCTCAGGGTGGATGCATGTCGATGGTTACCGCCTGCTGCACGTCATG
TTCCTTCCTTCTTTCTTTTGTGGCATTGGATTACATCCAAAAATGCTGCT
GGCTGATTTTAGATTATGTTTATTGTCGTGTGATGCTCACATGTGTTCCC
TTTCTCCCGTCCACCATCGGCAAACGTTTGGGCCACAGCTGGCTTGATAA
CATGGAAAAGAAGATAGGGCATGCCGGGGTCTACTTCCTCGACAAGGTAG
GACACCCTACTGTAGAGGTATTTGCTCAACATTACCGAACAGATTTAGAA
AATAATTTTCCGGCCCACAACAGAAAAGGGACGGATGGGATTTCGACGAA
ATAGAAATCGTTCCCCTTGTGTTATCATTATATGTGCCCCGACCGTTGTC
AAAGTGGTAAAATAGCTTGTCTGAACCAAACGTAGTTGTCAGTGAATCGT
CGCATCGAAGCACCGAAACGCCCTCTCCGCTACTGCGCCCGGTTTATCCA
CAGATGACCATCGCTGATGTTCTGTTCGCCACCGTCATGGCGATGCTCAA
GTCGGGGAAATACGCGACTATTCCCCCGAACGTCATCGACGCACACCCGA
AGTTGGTGGCCCTCGCTGAGTCCATCATGGCCCAGCCTAAGATCGCAGAG
TTCATCGCCAAAACCGGGTCAAAGTAATTCGAAACATTTCCCTACTGGCA
CCAAGTTTTAGCAAGGAACCGATGCTTTTATGACGCACGACAAAAGACGT
TGGCTGTGGTGCGATAGGTATTCGTACGCCTCGCCTGCAGCAGTGGTGTA
CTGTAGACAATGGTGACATATCTGGTCTATGGTTTTCACATAGTTCCGGT
TGAATAGTTTTTGCGGGACTGTCGGCGGGACTAGACTTGACCAAAGGCAG
TCGTTAGTGGCGGCATATGTGCACTCGGCGCCAGATTTCTGTTCCGATTC
CAATGTTTTGATCGTTTCCGTATATTGCAGGAATGTATTATGTAAGGCAA
GTCTCTTAGAAGCTCATAGGTCGTCTTGCTATGTATCTCTTATACAGCAT
TGAAGTGTATCAAATTGAGCGGTTGAACACAAAAGTGTTCCTTGGAGAAA
AGTTAATGTGGCCACTGGATTATGGCCCATGCTCCATCTTTCGAAAGCTG
ATGCCCGGGGGCATGGGTAAATGCGCTGCCAGTGCGCTTTGTTTCCATCC
TACCTGGCCTGGAAATACAACGATCTCATTACTAATTCGATTTTATGATA
AGATTGTAAGGGCCAGCTTCCAGATTATTGTGCCCACCGCAATATTATCC
ACAGCGCAAGATGTTAACCTTTGCTCATCGCCACTCCTTCCCACGATTTC
GCATCTTAGGGTACCTCGCATGGCAATTAATCTCGAAAAGGTATCAAACA
AATATGAGCCATCCCATAGGCAAAATGGGCACGATATCACCAAGAGGTCG
AGATGCCTCGTTACCCGAACTATCTTGTCCTCGACAACGTGGAGAGTCTA
GCTCGCCTCTTGTGTGGACTTGAAGACTCGCGCACAGCGAGAGGCGCGTT
TTCTTTCTCCCACCTTGGTTGCGAGCTCCTCGAGACAATCCAGTTGGACT
TTTCATTCCTTTCTCCGCGTTGGCCGTGTTGGGGTCGGGAGGAATGGCCG
ATAATGTTTTTGTCCTTTATATGATCCAGCTTTTTGTATTTCCTGATCCG
CTAATATTAATAGCTTCATCTGTCGGTGGTAGCAGTCCTTATACTAGTGT
AGTAGATTTTAAGGGTGGCTGCTATATATAATTTTCTGGCTTGCAACTGA
GTGGAGTACCCATGGTCTCATGAACACACAAAAGTTTGGGCTTCAAGATT
GTTAAGGGAGCTATTGCTAATTCGTCTTTTTATTATTATTTTCAATACAA
ATATTTTTGTCGCTCACCGTTCGCTGTAAGAAGAGGGGAAAATAGAGCCG
ACATGGACAACAAAACCAAGCAAATCACAATGTAAAAAGGTTAGTAAATA
TATAAAGAACTCTTCTTGTGGTCTTCTATAGGGAGAAATTAATCAATATC
TGTCTAGTAGACTATATAATATTTTAGGGTACCCAACGGCTCATTACAGT
ATAACTTGCCGAAAAGTTCGGAGCATTCTTGTTTATTTTATATAAAATGT
CGGTAAGAAACTAATACAAGACTTTCTATATATGCTTCCATTTCCCCAAC
GCTGCGTGCATATCTCATACATGACCTTTCAGACGGCTGTAGGTGTTGTA
TCAAAATCTTGAGTTACAAATTCTTATCACGTATGGTAAAAATCGAATTT
ACCTCCATCTTAGTAAACTCTTAAGAAAATGAAAGAGAGTATGTTAAAGT
TGCTTCAATTTTTCGGGAGATTATCCCGACGACCTCTACATTTGTGGTAT
TAGAGTCTTGCCTTTAAAATGGCTCTCTATGTGAGATGGAATTCCTGTGT
ATCGTCTTGAGCCTCCTGAGAACCTCTTGAGATCGAGAAAATCTCGTCCG
CGACCTGGAAAGGAATTTGCCCTTACGGATCTTAAAATATGTTGGACTTA
AATTTCCAGAGGGGAGAGTTTTGGAAAATGAGAATAATTCAGTACTTTTA
ACTGTCAATATATATATATATCATGCTTGAAATTCGTTGATATTTTTGGT
TTTCGCTGCTATTGTGGTGTCTGCTCCCGTTCGAGTGTCAAAGGATGACA
TAATAACTTGAGGGAGAATAGCCTTGGTATTATTGCAGATGGATTTCCTG
CCCAAGTCTCGTAGCATTTTGCAGACTCCACCGTAGTGTCAAAGGATGAC
ATAATCTCATGAGGGAGAATAGCACTGGTATCGTTGCAGATGGACTTCCT
GCCCAAGTCTCGGAGCGCATTGCAGCTAGTATGACATTAGCCTCTGCGGA
GAGTTTCGAGGGTGTTATAATTATAATGTACTCTTCTGACATTTTGATAG
TACAAGAGAGAATGAGAACATAGATACGATTGTAGTGACTCTGAGTTTGG
GCTCCCACCTTGACTACACCGTAAACCGCAAATACACGATAGGTCCTAGA
TAAAAATTGGGATCTTTTTCGTTATTGAACGATCTGGTAGGAACAACGGC
CGTGAAAAGAGTTACCAGGATAATTGCAGACCGGTTGATTAGGAATGTTG
CAAGAGTGCTGGAATAGTGACTCTTGAATATGAGTTAGAATAATTTTGGA
AGCTACATCACTGATAATTTTTAAAGGAACTGGACTATCATTGTTTATGA
AACTAGTAAAGTTTAAGGAGACTTGATGATTACGGAAGGATGATCGTAAA
GGTATCCTCGCATACGTAGAAGTCTTGGGGGCCATCACTAGTCCAATATG
AAGCAGGGGGTCGATCACTGAGTATCCACCCAATAACTCGTCTGGGGGCT
AATAAAGTTAGACTCTTTACGTGCGGATATATAACATTCTGTGGGACCAA
AAGGAATAAGATATAGGTTTACGCTGTTACCTGTTGGATGTATATATTAG
GATACCGGGATATTTCCCCCATGGC
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Coding sequence (CDS) from alignment at H-elongata_contig13230:1173..7847+

>mRNA_H-elongata_contig13230.2318.1 ID=mRNA_H-elongata_contig13230.2318.1|Name=mRNA_H-elongata_contig13230.2318.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig13230:1173..7847+ (Himanthalia elongata Himel1 dioecious)
ATGCTTAATTGTATTTGTGTAATATTCGTGTCTCCTACCGCGTTTTTTCG
CAACCATCCGCGTAGCGTTCTAACCCCCCCTGGTCTCCATCCCCCTTTGT
GCACACCTTGTCCCACCCCAGCATTCCCAAACGGTCAGCTACCTGTTCTC
GAAGTTGACGGCTACCCTCTCCCCCAGAGCGTGGCCATCCTTCGGTACGT
CGGCAAGCTTGCAGATGCTTAATTGTATTTGTGTAATATTCGTGTCTCCT
ACCGCGTTTTTTCGCAACCATCCGCGTAGCGTTCTAACCCCCCCTGGTCT
CCATCCCCCTTTGTGCACACCTTGTCCCACCCCAGCATTCCCAAACGGTC
AGCTACCTGTTCTCGAAGTTGACGGCTACCCTCTCCCCCAGAGCGTGGCC
ATCCTTCGGTACGTCGGCAAGCTTGCAGGCCTCTACCCAACCGATTACCT
CGAGGCTGCAAAGTGCGACGCCGTGATCGATTCCGTCTCCGATCTTTTCA
GTGTCTTGCGCCCGATAATAAGGGAGCAGGACGAAGCCAAAAAGGCCTCT
ACCCAACCGATTACCTCGAGGCTGCAAAGTGCGACGCCGTGATCGATTCC
GTCTCCGATCTTTTCAGTGTCTTGCGCCCGATAATAAGGGAGCAGGACGA
AGCCAAAAAGATGGAGATGAAAGCGGAGGCTGAGTCCAGCTATATCCCCA
CATGGAGATGAAAGCGGAGGCTGAGTCCAGCTATATCCCCACCTGGCTTG
ATAACATGGAAAAGAAGATAGGGCATGCCGGGGTCTACTTCCTCGACAAG
CTGGCTTGATAACATGGAAAAGAAGATAGGGCATGCCGGGGTCTACTTCC
TCGACAAGATGACCATCGCTGATGTTCTGTTCGCCACCGTCATGGCGATG
CTCAAGTCGGGGAAATACGCGACTATTCCCCCGAACGTCATCGACGCACA
CCCGAAGTTGGTGGCCCTCGCTGAGTCCATCATGGCCCAGCCTAAGATCG
CAGAGTTCATCGCCAAAACCGGGTCAAAGTAAATGACCATCGCTGATGTT
CTGTTCGCCACCGTCATGGCGATGCTCAAGTCGGGGAAATACGCGACTAT
TCCCCCGAACGTCATCGACGCACACCCGAAGTTGGTGGCCCTCGCTGAGT
CCATCATGGCCCAGCCTAAGATCGCAGAGTTCATCGCCAAAACCGGGTCA
AAGTAA
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