mRNA_H-elongata_contig13220.2310.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A6H5KVP7_9PHAE (Dynamin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVP7_9PHAE) HSP 1 Score: 754 bits (1948), Expect = 1.140e-267 Identity = 394/556 (70.86%), Postives = 446/556 (80.22%), Query Frame = 3
Query: 18 MLRTFSAVRQGVAPAGRAWGPVQCRKAPAG-YGVAGSGLRPRCSARYQARTMSSLDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQFSFFGTTAR 1682
ML+T A+R+G APAG W +C A + GS R+Q R S++D+KVQAEI+E+ ++LHA+FIQPLNDK GPLEK TGGYQSTKMPFVFVLGNHSSGKSSFIN+VLGRNIQTAGVAPTDDSFTIIAPGPSD+DQDGPALVGDPDMGF+GLRQFGPTL HH ELKVRSG STNSFMMVDSPGMIDSP+SR+ Y+ S P GR K D +RGYDFEGVVRWFAERADVI+LFFDPDKPGTTGETLSILTNSL G DHKLY+VLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV ++G G GEV S +LE TRD+V AEVMKAPKRRIDN+ITRLTDS+HLLQVHT +LDAL KD+ AK+VR+G TF+VLAAGG + GG VFLGAP EMAVG +AG LQ+ NSKALK+ +MIS+EGLNHYF + YTRE++EGDESI A+W+RIR LH TLASLG+DGV +VKA EQRELQ+ILD+DIP+LRRQAAPV+FSFFGT +R
Sbjct: 1 MLQTVRALRRGGAPAGARWLFERCALVRASSWETDGS--------RHQRRRQSTVDSKVQAEILEKCDDLHASFIQPLNDKTAGPLEKLQTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGPSDLDQDGPALVGDPDMGFSGLRQFGPTLTHHTELKVRSGISTNSFMMVDSPGMIDSPMSRS-IYERSDPDSPAGRGKGVDTSRGYDFEGVVRWFAERADVILLFFDPDKPGTTGETLSILTNSLAGKDHKLYVVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVKSRDGGA------GEGEV---------ELSLSSGLHDLEATRDDVAAEVMKAPKRRIDNIITRLTDSVHLLQVHTTVLDALQKDFRNAKLVRHGTTFAVLAAGGGLFGGSVFLGAPIEMAVGAAGLALASAGGLQFHNSKALKATHEEMISVEGLNHYFGKIYTREVSEGDESITASWRRIRHGLHLTLASLGIDGVSRVKASEQRELQKILDTDIPSLRRQAAPVRFSFFGTKSR 532
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A836CHQ6_9STRA (Dynamin_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ6_9STRA) HSP 1 Score: 597 bits (1540), Expect = 1.050e-205 Identity = 315/534 (58.99%), Postives = 387/534 (72.47%), Query Frame = 3
Query: 111 GVAGSGLRPRC-SARYQARTMSSLDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKN----------GAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQFSFFGTTA 1679
GV + PR S R A T LD +QAEIM + +L + FIQPLND++ GPL+KS++GGY++TK+PFVFVLGNHSSGKSSFIN +GR IQT GVAPTDDSFTIIAPGP DIDQDGPAL+GDPDMGF+GLRQFGP L+HH LKVR +T++FMMVDSPGMIDSPV+RA+A+D+ G ++ + RGYDFE VV+WFA+RADVI+LFFDPDKPGTTGETLSILTNSLPG+DHKLYIVLNKAD+F++IHDFARA+GSLCWNLSKVI RKDLPRIYTMCLP D+ GD G L S +LE+TR V +EV KAPKRRIDN+ITRLTDS+HLLQVH I++ L +DY RAK + G T +V+ AG +G ++L AP E+ V T + AG + + S+ L+ KE M+S+EGLN FS+ Y ELAEGDE I + W+RIR++L TL + GL+ + VKA + ++LQRILD DIP+LRR AAPVQF++ G A
Sbjct: 5 GVPSLRINPRVLSTRDSAAT---LDTSLQAEIMSKCEDLSSKFIQPLNDRLRGPLDKSSSGGYRTTKLPFVFVLGNHSSGKSSFINHCIGRTIQTTGVAPTDDSFTIIAPGPKDIDQDGPALIGDPDMGFSGLRQFGPALIHHTCLKVRRDIATSTFMMVDSPGMIDSPVTRASAFDSGG-----GAHNRSLSDRGYDFEAVVKWFADRADVILLFFDPDKPGTTGETLSILTNSLPGLDHKLYIVLNKADKFERIHDFARAFGSLCWNLSKVIQRKDLPRIYTMCLPEADRQQQXXXXXXXXXXXXXGGDAGESSRLG------------SGLQDLESTRVTVLSEVFKAPKRRIDNIITRLTDSVHLLQVHATIVEDLQRDYRRAKWGQRGTTLAVVGAGAGAAGASMYLSAPLELPAAVGVLTVLLAGGVHFMTSRTLRQKEEHMLSVEGLNMRFSKCYATELAEGDEMINSVWKRIRESLKLTLGTSGLNAIPSVKANDLKQLQRILDQDIPSLRRSAAPVQFTYEGAKA 518
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A7S2UYE7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYE7_9STRA) HSP 1 Score: 522 bits (1344), Expect = 4.890e-176 Identity = 288/505 (57.03%), Postives = 354/505 (70.10%), Query Frame = 3
Query: 177 LDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGY--QSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTG----RRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDK--NGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGR----AKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQ 1655
L + Q I++R ELHAT +QPLN+ GPL G ++TK+PFVF+LGNHSSGKSSFIN+VL R IQTAGVAPTDDSFTII+PGP DIDQDGPALVGDPDMGF+GLR FGP L+HH +LKVRSG +TNSFMMVDSPGMIDSPVSR +A++++ S G R+++ D RGYDFE VRWFA+RADV++LFFDPDKPGTTGETLSILTNSL G+DHKLYI+LNKADQF++IHDFARAYGSLCWNLSKVI RKDLPRI+TMCLP D+ +G DL G L D L TR++V AEV KAPKRRIDNVITRLTDS HLL+VH +L L K R ++ GAT ++AAG + + + P E+ A + G N + L + A +++ EGLN F Y LAEGDE + A W+RIRDNL +L + G +GV+KV+AG+ +EL R+L+ ++P+LRR A+P Q
Sbjct: 46 LSEETQKTILKRCGELHAT-LQPLNEGTRGPLTGGGGMGLDGRTTKLPFVFLLGNHSSGKSSFINYVLQRKIQTAGVAPTDDSFTIISPGPQDIDQDGPALVGDPDMGFSGLRHFGPALIHHIQLKVRSGVATNSFMMVDSPGMIDSPVSRVSAFESATASYEGGYDTDRQRQFD--RGYDFEAAVRWFADRADVVLLFFDPDKPGTTGETLSILTNSLAGLDHKLYIILNKADQFRRIHDFARAYGSLCWNLSKVITRKDLPRIFTMCLPEQDRLADGGPTARLDLDAGA--------NGESGGLQD---LHETRNDVVAEVFKAPKRRIDNVITRLTDSAHLLEVHCTVLQQLQKSRNRHVWRGRLALTGAT--LVAAGAAAAAATLTM--PTEVLAATGAAGLMVVGGTHLYNRRVLADETAQLLTSEGLNTAFEACYAPRLAEGDEFVLAVWKRIRDNLKVSLTTAGFEGVDKVRAGQLQELARVLEEEVPSLRRLASPHQ 532
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A7S2UGL1_9STRA (Hypothetical protein n=3 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGL1_9STRA) HSP 1 Score: 509 bits (1310), Expect = 2.270e-172 Identity = 271/472 (57.42%), Postives = 324/472 (68.64%), Query Frame = 3
Query: 243 PLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQF 1658
PLND+ GPL K + G T +PFVF++GNHSSGKSSF+N+VLGR +QTAGVAPTDDSFT+IAPGP D DQDGPAL+GDPDMGF+ LRQFGPTL+HH +LKVRSG + +FMMVDSPGMIDSPVS F+G+ TD RGYDF+GVVRWFAERADV++LFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV GD + E++ D Q TRD+V AEVMKAPKRRIDNVIT L DS+HLL +H I + + K Y + AGG ++ ++ G P E + GV T + AG L++ NS L EA +++ E L+ F R + RE++E DE A+ WQRIR L +L S+GL + V + E +L ILD DIP LRR A+P F
Sbjct: 2 PLNDQWRGPLAKHSDRG---TSLPFVFLVGNHSSGKSSFVNYVLGRKVQTAGVAPTDDSFTVIAPGPEDTDQDGPALIGDPDMGFSNLRQFGPTLIHHTQLKVRSGINNGNFMMVDSPGMIDSPVSSG---------GFSGQTNTTD--RGYDFQGVVRWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLLIVLNKADQFEKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVK--------GGDTAQKEIMQGLADLHQ-------------TRDDVVAEVMKAPKRRIDNVITHLNDSVHLLMMHALISEDVRKRYSKVVWDHRTQEVGTAVAGGGLAALSLYAGIPTEFSFGVFCVTVLGAGGLRWHNSIQLTEAEAQLLTTEELSASFQRTHAREISEADEFTASVWQRIRGPLQMSLQSIGLANIPSVSSSEWAQLNNILDQDIPKLRRLASPTHF 438
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A7S2EBB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EBB6_9STRA) HSP 1 Score: 507 bits (1305), Expect = 1.230e-169 Identity = 280/508 (55.12%), Postives = 349/508 (68.70%), Query Frame = 3
Query: 165 TMSSLDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV-------TDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRA---KMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQF 1658
T + + K+Q EI+++ +ELH++ + P+N+K+ GPL K + G T +PFV ++GNHSSGKSSF+N+VLGR +QTAGVAPTDD FT+IAPGPSD+DQDGPALVGDPDMGFA LRQFGPTL+HH +LKVRS N+FM+VDSPGMIDSPVS A S + G RGYDF+GVV+WFAERADV++LFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLP TD+ GA V +G G L+D L TRD+V AEVMKAPKRRIDNVIT L DS+HLL +H I++ Y R V+ G T LA G ++ G++ P E GV+A T + G + + NS LK+ E ++++ E L F R ++RE++E DE ++ WQRIRD L +L ++GLD V + + L +ILD DIP LRR A+P F
Sbjct: 101 TAETAEGKIQREILDKCSELHSSLM-PMNEKLRGPLAKHSDRG---TSLPFVLLVGNHSSGKSSFVNYVLGRKVQTAGVAPTDDCFTVIAPGPSDVDQDGPALVGDPDMGFANLRQFGPTLIHHTQLKVRSDIQNNNFMLVDSPGMIDSPVS------AGGMSQYGGG---AIMDRGYDFQGVVKWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLMIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPASSTTTSSTDETGAT-VPPPIGSG---------------LAD---LHQTRDDVVAEVMKAPKRRIDNVITHLNDSVHLLLMHARIVEDTRSRYSRMVWENRVQEGGT---LATGASLTALGMYFSLPVEFTGGVVAATVLGVGGMHWYNSSKLKAHEDNLLTPEELGASFQRTHSREVSEADEFTSSVWQRIRDPLMVSLRTVGLDNTPTVGSKDIYALNQILDEDIPRLRRLASPTHF 573
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A7S3V588_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V588_9STRA) HSP 1 Score: 502 bits (1293), Expect = 2.080e-168 Identity = 269/495 (54.34%), Postives = 343/495 (69.29%), Query Frame = 3
Query: 174 SLDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQF 1658
++ VQ++I++ + LH + I PLN+K+ GPL K++ ++T +PFVF++GNHSSGKSSFIN+VLGR+IQTAGVAPTDD FT++APGP D DQDGPAL+GDPDMGF+GLRQFGPTL+HH +LKVR+ T+T SFMMVDSPGMIDSPVS+A +P + G + D RGYDF+GVVRWF+ERADV++LFFDPDKPGTTGETL++L +SL GMDHKL IVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLP +K D G +G G L D L TRD+V EVMKAPKRR+DN++T L DS+HLL +H + + + K Y + + AG +S G + P E A T V G +++ N L E+ ++S+E L+ F R ++RE+++ DE A+ WQRIRDNL +L S GL + E +L+RILD +IP LRR A+P F
Sbjct: 77 NISPSVQSQILDECSSLHRS-IMPLNEKIRGPLAKNSD---KNTALPFVFLVGNHSSGKSSFINYVLGRSIQTAGVAPTDDCFTVVAPGPDDTDQDGPALIGDPDMGFSGLRQFGPTLIHHTQLKVRADTNTPSFMMVDSPGMIDSPVSQA-----GIPQGY-GSGQSMD--RGYDFQGVVRWFSERADVVLLFFDPDKPGTTGETLNVLLHSLSGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLP--NKTDGTD--GSIGDG---------------LKD---LHQTRDDVLLEVMKAPKRRVDNIVTHLNDSVHLLLMHAQVAEDVQKKYSKIVWNNRVQELGSMTAGIGLSVLGFYAQLPMEFTGSAAALTVVGVGGMKWFNDTKLDEAESQLVSMEELSASFQRTHSREISDADEYTASIWQRIRDNLQLSLKSEGLSSYPSASSSEMDDLRRILDEEIPRLRRLASPNHF 537
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: B8BQ51_THAPS (Dynamin_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ51_THAPS) HSP 1 Score: 504 bits (1299), Expect = 2.470e-168 Identity = 276/486 (56.79%), Postives = 332/486 (68.31%), Query Frame = 3
Query: 201 IMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSR---ATAYDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAP 1649
I+ + LH++ I PLN + GPL K++ G T +PFVF++GNHSSGKSSFIN+VLGR++QTAGVAPTDD FT+IAPGP D+DQDGPALVGDPD+GF GLRQFGPTL+HHA+LKVR G +FMMVDSPGMIDSPVS + Y + RGYDF+GVVRWFAERADV++LFFDPDKPGTTGETLSIL +SL GMDHKL IVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRI+TMCLPV K D S E L + L+D L TRD+V AEVMKAPKRRIDNVIT L DS+HLL +H + + + Y + + FS L AG ++ G+ PP+ GV+A T V G L++ NS LK E ++S+E L+ F R + RE+ E DE A+ WQR+RD L +L GL VK G+ + LQ ILD +IP LRR A+P
Sbjct: 131 IISQVTNLHSS-IMPLNTTLRGPLAKNSDRG---TSLPFVFLVGNHSSGKSSFINYVLGRSVQTAGVAPTDDCFTVIAPGPKDVDQDGPALVGDPDIGFEGLRQFGPTLIHHAQLKVREGIQNQNFMMVDSPGMIDSPVSSGGMSMGYSMGNSGMHSSSTSSAVMDRGYDFQGVVRWFAERADVVLLFFDPDKPGTTGETLSILLHSLGGMDHKLLIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIFTMCLPV--KRDDNDASSTNIAQEALD--------QRALAD---LHQTRDDVVAEVMKAPKRRIDNVITNLHDSVHLLLMHAVVAEDVRSRYSKRQWENRIQEFSSLVAGVGLAALGLHFSVPPQFTGGVVAATVVGVGGLRWFNSSKLKDAEEQLLSVEELSASFQRTHPREVNEADEFYASVWQRVRDPLKLSLWRTGLSDFPAVKKGDLQHLQMILDEEIPRLRRLASP 599
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A7S1BVP1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVP1_9STRA) HSP 1 Score: 501 bits (1291), Expect = 4.610e-168 Identity = 276/504 (54.76%), Postives = 342/504 (67.86%), Query Frame = 3
Query: 177 LDAKVQAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATAYDASMPSDFTGRRKKTDAT---RGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTD-------KNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKMVRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLHRTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQF 1658
+D VQ E++ ++LHA + PLN+K+ GPLEKS + QST +PFV ++GNHSSGKS+FIN VLGR +QT+GVAPTDD FTIIAPGP DIDQDG A +GDPDMGF LRQFGP L+HH +LK+RS T SFMMVDSPGMIDSP S ++ M RR K D RGYDFEGVVRW++ERADVI+LFFDPDKPGTTGETLSIL ++L GMDHKL IVLNKADQF++IHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPV+D + + + GDL G+ L +L R EV AEVMKAPKRRIDN ITRL DS++LL++H + + L Y R +VL +G S G +LG ++ V + + A + NS+ L+ EAD+ S +GL+ F R Y R++AEGDE A+ W+R+R +L L+++GL V VKAGE +L RIL+ +IP LRR A+P F
Sbjct: 62 VDPAVQTEVLRACSDLHAGVL-PLNEKIRGPLEKSAS---QSTALPFVLLVGNHSSGKSTFINHVLGRTVQTSGVAPTDDCFTIIAPGPQDIDQDGHAALGDPDMGFGSLRQFGPALIHHTQLKIRSDVKTRSFMMVDSPGMIDSPAS----HEGMML-----RRSKDDRALMDRGYDFEGVVRWYSERADVILLFFDPDKPGTTGETLSILVHALGGMDHKLLIVLNKADQFRRIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVSDGPDETPSDDPSPEEDGDLPLGQGLA----------------DLRMARREVVAEVMKAPKRRIDNAITRLGDSVNLLRMHAVLTEDLRSRYVREVWSSRLYFSTVLVSGSAASAGSFYLGQDLKVTAAVASASLAVAALTGWYNSQLLRRAEADLASPDGLSASFRRSYARQIAEGDEFTASLWERVRGSLELNLSAVGLANVPAVKAGEVEDLDRILEEEIPRLRRLASPSHF 536
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: A0A4D9CUF5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF5_9STRA) HSP 1 Score: 496 bits (1276), Expect = 1.050e-164 Identity = 278/515 (53.98%), Postives = 345/515 (66.99%), Query Frame = 3
Query: 192 QAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATA------YDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKN-------------GAVDVSG-DLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKM-VRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLH---RTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQFSF 1664
Q +++R +EL + ++QP+ND++ GPLEK + ++ +PFVF+LGNHSSGKSSF+N+V R IQTAGVAPTDDSFTIIAPGP+DIDQDGP+ +GDPDMGFAGLR FGP L+HH +LK+R+G +T FM+VDSPGMIDSP + A+ AS D T R + RGYDF+GV +WFA+RADVI+LFFDPDKPGTTGETLSILT SL GMDHKLYIVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLP + G +++ G LG G L+D LE +R+EV EV+KAPKRRIDNVITRL DS+HL+Q+H +L+AL D+ R R GA LA G + GGG++LG + + + AG YAN K LK A + S EGL F R Y R + EGDE + + W+R +L T L + KV E +E+Q IL+ D+PALRR AAPV ++F
Sbjct: 58 QRRVLQRCDELQS-YLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPADIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASYKEDNT-RSARNHLDRGYDFQGVCKWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSHSSRPAALGGELEIEGPSLGLG---------------LAD---LERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGVGAV-GGGMYLGVALQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGQDLGKLPKVSKAELQEIQCILEEDVPALRRLAAPVSWTF 548
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Match: W7TJF7_9STRA (Rme1-like gtpase atpase without a c-terminal eh domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJF7_9STRA) HSP 1 Score: 494 bits (1273), Expect = 3.950e-164 Identity = 275/501 (54.89%), Postives = 341/501 (68.06%), Query Frame = 3
Query: 192 QAEIMERSNELHATFIQPLNDKVHGPLEKSNTGGYQSTKMPFVFVLGNHSSGKSSFINFVLGRNIQTAGVAPTDDSFTIIAPGPSDIDQDGPALVGDPDMGFAGLRQFGPTLVHHAELKVRSGTSTNSFMMVDSPGMIDSPVSRATA------YDASMPSDFTGRRKKTDATRGYDFEGVVRWFAERADVIMLFFDPDKPGTTGETLSILTNSLPGMDHKLYIVLNKADQFKKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPVTDKNGAVDVSGDLGRGEVLTPTQDTQQRYKTLSDTTELETTRDEVKAEVMKAPKRRIDNVITRLTDSLHLLQVHTDILDALHKDYGRAKM-VRYGATFSVLAAGGCISGGGVFLGAPPEMAVGVLATTFVAAGSLQYANSKALKSKEADMISIEGLNHYFSRRYTRELAEGDESIAAAWQRIRDNLH---RTLASLGLDGVEKVKAGEQRELQRILDSDIPALRRQAAPVQFSF 1664
Q +++R +EL + ++QP+ND++ GPLEK + ++ +PFVF+LGNHSSGKSSF+N+V R IQTAGVAPTDDSFTIIAPGP+DIDQDGP+ +GDPDMGFAGLR FGP L+HH +LK+R+G +T FM+VDSPGMIDSP + A+ AS D T R + RGYDF+GV RWFA+RADVI+LFFDPDKPGTTGETLSILT SL GMDHKLYIVLNKADQF+KIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLP + S R L + + L +LE +R+EV EV+KAPKRRIDNVITRL DS+HL+Q+H +L+AL D+ R R GA LA G + GGG++LG + + + AG YAN K LK A + S EGL F R Y R + EGDE + + W+R +L T L + KV E +E+Q IL+ ++PALRR AAPV ++F
Sbjct: 87 QRRVLQRCDELQS-YLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGLATTEFMLVDSPGMIDSPHASASQPSPSSLISASDKGDNT-RSARNHLDRGYDFQGVCRWFADRADVILLFFDPDKPGTTGETLSILTQSLAGMDHKLYIVLNKADQFRKIHDFARAYGSLCWNLSKVIPRKDLPRIYTMCLPAAYQRQQTSRSS---RPAALGIESEIEGPSSGLG-LADLERSREEVVGEVLKAPKRRIDNVITRLADSVHLVQMHALVLEALRNDFARELWRFRAGAASLCLAGMGAV-GGGMYLGVAFQTILAFSVLYALGAGGFVYANEKMLKEHAAVLASPEGLRLIFERLYARPVMEGDEFVNSLWKRTFPSLQIMLNTQVGRDLGKLPKVSKAELQEIQCILEEEVPALRRLAAPVSWTF 577 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13220.2310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13220.2310.1 >prot_H-elongata_contig13220.2310.1 ID=prot_H-elongata_contig13220.2310.1|Name=mRNA_H-elongata_contig13220.2310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=559bp MLRTFSAVRQGVAPAGRAWGPVQCRKAPAGYGVAGSGLRPRCSARYQARTback to top mRNA from alignment at H-elongata_contig13220:296..7527+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13220.2310.1 ID=mRNA_H-elongata_contig13220.2310.1|Name=mRNA_H-elongata_contig13220.2310.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7232bp|location=Sequence derived from alignment at H-elongata_contig13220:296..7527+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13220:296..7527+ >mRNA_H-elongata_contig13220.2310.1 ID=mRNA_H-elongata_contig13220.2310.1|Name=mRNA_H-elongata_contig13220.2310.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3354bp|location=Sequence derived from alignment at H-elongata_contig13220:296..7527+ (Himanthalia elongata Himel1 dioecious)back to top |