mRNA_H-elongata_contig13206.2302.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13206.2302.1
Unique NamemRNA_H-elongata_contig13206.2302.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: D7FQZ4_ECTSI (Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ4_ECTSI)

HSP 1 Score: 872 bits (2252), Expect = 1.200e-312
Identity = 436/515 (84.66%), Postives = 471/515 (91.46%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIMA 1545
            F+TKVFEKQRI LGGTEED++KGGRDLF LLP AFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAG++IPVKIGLREGSAS++LA+NVGF+E+ GTLGEMYETI ESDLVILLI+D+AMA+NHEKVF+KLKKGATLGLSHGFLLGHLDALGKKFP DINVVAVCPKGMGPSVRRLYEQGK VNGSGINASFAVHQD  GKATDIALGWSIALGSPF+FPTTL DEYRSDIYGERGILLGAVHGI+ETLFRRFVKQGMSPEEAF+QSSESITGPITK ISK GI+K+YE LD+A ++EFK+             VYSACY P KEIMQECYNEV SGNEIRSVVMQG RLN INTGKIDGTFTWK   VGEQVRA+RVEE+IPLNPFTAGVYVATMMAQIDVLKE GHSYTEIVNESVIEAVDSLCPYMHYKGV+FMVDNCS TARLGSRKWAPRFDYILEQLAYTA+D G+ VD+ L+SDF +N VHDAI+VC+ELRP VDISCAAPSTVKE+ +A
Sbjct:   68 FETKVFEKQRIALGGTEEDVVKGGRDLFELLPTAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGVDIPVKIGLREGSASYKLAQNVGFSEDNGTLGEMYETIEESDLVILLISDSAMASNHEKVFSKLKKGATLGLSHGFLLGHLDALGKKFPDDINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVTGKATDIALGWSIALGSPFSFPTTLTDEYRSDIYGERGILLGAVHGIIETLFRRFVKQGMSPEEAFKQSSESITGPITKGISKMGILKLYESLDQAGKDEFKS-------------VYSACYAPAKEIMQECYNEVRSGNEIRSVVMQGARLNDINTGKIDGTFTWK---VGEQVRADRVEEEIPLNPFTAGVYVATMMAQIDVLKEGGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNGSAVDDSLISDFLENPVHDAIRVCSELRPAVDISCAAPSTVKEIALA 566
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A835Z8S5_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S5_9STRA)

HSP 1 Score: 747 bits (1928), Expect = 1.030e-263
Identity = 370/514 (71.98%), Postives = 436/514 (84.82%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            FDTK+F K  I L GTEE+I+KGGRDLF LL  AF+GI++IGV+GWGSQAPAQAQNIRDS+EAAG++IPV IGLREGSAS++LAR VGF+EE GTLG+MY+ IA+SDLVI+LI+DA +A  ++K+F  +K GATLGLSHGFLLGHL+++G+KFP +INVVAVCPKGMGPSVRRLYEQGK VNGSGINASFAVHQD +G+AT+IALGWSIALGSPF+F TTL DEY+SDIYGERGILLGAVH IVE+L RR+ ++GM+ EEAF+QS ESITGPITKTIS +G++K+Y  L    Q++F+ +             YSA Y P +EI+QECY+EV+SGNEIRSVVM G RL +   GKIDGT TW   QVGE+VRA R E+ IPLNPFTAGVYVA MMAQIDVL++ GHSYTEIVNESVIEAVDSLCPYMHYKGV+FMVDNCS TARLGSRKWAPRFDYILEQLAYTA+D  A +++ L+ DF  N VHDAI+VC ELRP VDISCAAPSTVKE+++
Sbjct:   51 FDTKIFPKTGIKLAGTEEEIVKGGRDLFPLLKDAFKGIKRIGVIGWGSQAPAQAQNIRDSIEAAGMDIPVTIGLREGSASYELARQVGFSEEAGTLGDMYKVIADSDLVIVLISDAGLAKGYKKIFDTIKPGATLGLSHGFLLGHLESIGEKFPDNINVVAVCPKGMGPSVRRLYEQGKTVNGSGINASFAVHQDVDGRATEIALGWSIALGSPFSFLTTLTDEYKSDIYGERGILLGAVHAIVESLMRRYTREGMTAEEAFKQSCESITGPITKTISHDGVLKLYNDLSAPDQQQFRIA-------------YSASYLPAREILQECYDEVASGNEIRSVVMHGDRLQEFPIGKIDGTHTW---QVGEKVRAARDEDKIPLNPFTAGVYVAVMMAQIDVLRKAGHSYTEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILEQLAYTAVDNDAPINDALIEDFLANPVHDAIRVCGELRPNVDISCAAPSTVKEIVL 548
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A7S2W6X2_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6X2_9STRA)

HSP 1 Score: 721 bits (1860), Expect = 3.160e-253
Identity = 356/511 (69.67%), Postives = 429/511 (83.95%), Query Frame = 1 
Query:    4 DTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEV 1536
            +T +F  + I L GT+E+I++GGRDLF  LP+AF+GIE IGV+GWGSQAPAQAQN+RDSLE  G  I VKIGLREGS+SF+LAR VGFTE++GTLGEM+ETIAESDLV+LLI+DAA AA ++++FA +K GATLGLSHGFLLGHL+++G++FP +INV+AVCPKGMGPSVRRLYEQGK VNG+GIN+SF VHQD  G+AT+IALGW IALGSPF F TTL +EY+SDIYGERGILLG VHGIVE+LFRR+V QGM+PE+AF+ S ESITGPITK ISKEGI+ +YEGL    ++ F             +  YSA Y P +EI+QECY+EV+SGNEIRSV++ G RL++   GKIDGT+TW   QVGE+VRA R E+ IPLN FTAGVYVA MMAQIDVL++ GHS++E+VNESVIEAVDSLCPYMH+KGV+FMVDNCS TARLGSRKWAPRFDYIL+QLAYTA+D+GA+V+  L+ +F  N VH AI +C +LRP VDISCAAPSTVKEV
Sbjct:   65 ETDIFSPETIDLSGTQEEIVRGGRDLFDKLPEAFKGIESIGVIGWGSQAPAQAQNLRDSLEGTG--IKVKIGLREGSSSFELARGVGFTEDEGTLGEMFETIAESDLVVLLISDAAQAAMYKEIFAAMKPGATLGLSHGFLLGHLESIGEEFPDNINVIAVCPKGMGPSVRRLYEQGKSVNGAGINSSFGVHQDVTGRATEIALGWGIALGSPFMFKTTLTEEYKSDIYGERGILLGGVHGIVESLFRRYVAQGMTPEDAFKNSCESITGPITKKISKEGIMALYEGLSDEDKKVF-------------EEAYSASYLPSREILQECYDEVASGNEIRSVILHGARLSEFPIGKIDGTYTW---QVGEKVRAARDEDKIPLNSFTAGVYVAMMMAQIDVLRKAGHSFSEVVNESVIEAVDSLCPYMHFKGVAFMVDNCSMTARLGSRKWAPRFDYILDQLAYTAIDKGASVNSDLIQNFKSNPVHKAISICCDLRPAVDISCAAPSTVKEV 557
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: W7TPK9_9STRA (Acetohydroxy-acid reductoisomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK9_9STRA)

HSP 1 Score: 717 bits (1850), Expect = 8.310e-251
Identity = 350/508 (68.90%), Postives = 427/508 (84.06%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPST 1524
            FD+KVF+K  I LGGT+E+I+KGGRDLF LLP+AFEGI++IG++GWGSQAPAQ QN+++SL  AG  + VK+GLR+ S S+QLA +VGFTE+ GTLGEM++ I ESD+VILLI+DAA    H+++FA LK GATLGLSHGFLLG+L ++G  FP+ INV+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVH+D+NGKAT++ALGW +A+GSPF F TT+ +EY+SDIYGERGILLGAVHGI+ETLFRR+V +GM+PE+AF++S+ESITGPITK ISKEG++K+Y  L  A +E F  +             YSA Y+P +EI+QE Y+EV+SGNEIRSVVM   RL++   GKIDGT+TW   QVGE VRA R E++IPLNPFTAGVYVATMMAQIDVL++ GHS++EIVNESVIEAVDSLCPYMHYKGV+FMVDNCS TARLGSRKWAPRFDYIL+QLAYTA+D    V+++L+ DF +N VHDAI VC  LRPPVDISCAAPST
Sbjct:   69 FDSKVFKKTPISLGGTQEEIVKGGRDLFPLLPQAFEGIKQIGIIGWGSQAPAQGQNLKESL--AGTGVKVKVGLRKSSPSWQLAESVGFTEKDGTLGEMFDVIKESDMVILLISDAAQVKLHKEIFAALKPGATLGLSHGFLLGYLQSIGSDFPEGINVIAVCPKGMGPSVRRLYEQGKTVNGAGINSSFAVHKDANGKATELALGWGVAIGSPFLFKTTMTEEYKSDIYGERGILLGAVHGIIETLFRRYVAEGMTPEQAFKESAESITGPITKIISKEGVLKLYNSLSAADKEVFNKA-------------YSATYKPAREILQEIYDEVASGNEIRSVVMHSERLSEFPVGKIDGTYTW---QVGETVRAARKEDEIPLNPFTAGVYVATMMAQIDVLRKAGHSFSEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKWAPRFDYILDQLAYTAVDNSVPVNQELIGDFLKNPVHDAISVCCSLRPPVDISCAAPST 558
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: B7GDA6_PHATC (Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDA6_PHATC)

HSP 1 Score: 697 bits (1798), Expect = 3.720e-244
Identity = 345/514 (67.12%), Postives = 422/514 (82.10%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F++K+FE Q +    T+E I+KGGRDLF LLPKAFEGIEKIGV+GWGSQAPAQAQN++DSL+  G +I V IGLREGS+SF+ A++ GF+EE GTLGEM+  I ESDLV+LLI+DAA A  ++++FA +K GATLGLSHGFLLGHLD++G+KFP++++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQD +GKAT++ALGW IALGSPF F T+L  EY SDIYGERGILLGAVHGIVE+L+RR+ +QGMSPE+AF +SSESITG I K IS +GI  +YE LD   +E F             Q  YSA Y+P KEI+QE Y+EVSSGNEIR+V+M G R++K   GKIDGT TWK   VGE+VRA R E+ IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+GV+FMVDNCS TA+ GSRKWAPRFDYIL+QLAYTA+D GA V+E+L++DF ++ VH A++ C +LRP VDIS  A ++ KE+++
Sbjct:   41 FESKIFETQEVTFADTKEIIVKGGRDLFPLLPKAFEGIEKIGVIGWGSQAPAQAQNLKDSLKEVGADITVSIGLREGSSSFEEAKDCGFSEEDGTLGEMFSVIKESDLVVLLISDAAQAKLYKEIFAAMKPGATLGLSHGFLLGHLDSIGEKFPENMDVIAVCPKGMGPSVRRLYEQGKDVNGAGINSSFAVHQDVSGKATELALGWGIALGSPFMFETSLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFLESSESITGNIVKIISTKGIKAVYESLDGDDKETF-------------QKAYSASYKPAKEILQEIYDEVSSGNEIRTVIMHGARIDKYPVGKIDGTDTWK---VGEKVRAERDEDKIPLNPFTAGVYVATMMAQIDVLLEEGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGAPVNEQLIADFEKHSVHQAVEECCKLRPAVDISLFAETSTKEIVI 538
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: K0TKV8_THAOC (Acetohydroxy-acid reductoisomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKV8_THAOC)

HSP 1 Score: 690 bits (1781), Expect = 1.090e-241
Identity = 343/514 (66.73%), Postives = 423/514 (82.30%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F + +FE + +    T+E I+KGGRDLF LLPKAFEGI+++GV+GWGSQAPAQAQN+RDSL+ AG ++ V+IGLREGS+SF+ AR VGF+E+  TLGEM++ I +SDLV+LLI+DAA AA ++++FA +K GATLGLSHGFLLG+LD++G+ FP+D++V+AVCPKGMGPSVRRLYEQGK+VNG+GINASFAVHQD +GKAT++ALGW +ALGSPF F T+L+ EYRSDIYGERGILLGAVHGIVE+L+RR+ +QGMSPE+AF +SSESITG I KTIS +GI  +YEGL    +E FK +             YSA Y P KEI+QE Y+EVSSGNEIR+V+M G R+NK   GKIDGT TW   QVGE+VRA R EE+IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+GV+FMVDNCS TA+ GSRKWAPRFDYIL+QLAYTA+D G  V+E L+S F  + VH A++ C +LRP VDIS  + S+ KE+++
Sbjct:   34 FASDIFEVRDVEFADTKEQIVKGGRDLFPLLPKAFEGIKEVGVIGWGSQAPAQAQNLRDSLDEAGCDVKVRIGLREGSSSFEEAREVGFSEDADTLGEMFDIIKKSDLVMLLISDAAQAALYKEIFAAMKPGATLGLSHGFLLGYLDSIGESFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFAVHQDKSGKATELALGWGVALGSPFMFETSLSSEYRSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFVESSESITGNIVKTISTQGIKAVYEGLSGDDKEVFKQA-------------YSASYLPSKEILQEIYDEVSSGNEIRTVIMHGKRINKFPVGKIDGTDTW---QVGEKVRAERDEENIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGKPVNEDLISAFENHKVHAAVEECCKLRPTVDISVGSSSSTKEIVI 531
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A7S2PBH0_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PBH0_9STRA)

HSP 1 Score: 684 bits (1765), Expect = 3.350e-239
Identity = 341/514 (66.34%), Postives = 418/514 (81.32%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F + +FE + + + GT E I+KGGRDLF  LPKAFEGI++IGV+GWGSQAPAQAQN+RDSL+ AG +I V+IGLREGS+SF+ AR VGF+E+  TLGEMY+ I +SDLV+LLI+DAA AA +++VFA +K GATLGLSHGFLLG+L+++G+ FP+D++V+AVCPKGMGPSVRRLYEQGK+VNG+GINASFAVHQD +GKATD+ALGW +ALGSPF F TTL  EY SDIYGERGILLGAVHGIVE+L+RR+ +QGMSPE+AF +S ESITG I K IS +GI  +Y+GL+   ++             I +  YSA Y P KEI+QE Y+EVSSGNEIR+V+M G R++K   GKIDGT TW   QVGE+VR +R EE+IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+GV+FMVDNCS TA+ GSRKWAPRFDYIL+QLAYTA+D G  VDE ++S F  + VH A+  C ELRP VDIS  + S+ KE+++
Sbjct:   38 FSSDIFEVRSVDMAGTTEQIVKGGRDLFPKLPKAFEGIKEIGVIGWGSQAPAQAQNLRDSLDEAGCDIKVRIGLREGSSSFEEAREVGFSEDADTLGEMYDIIGKSDLVMLLISDAAQAALYKEVFAAMKPGATLGLSHGFLLGYLESIGEGFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINASFAVHQDKSGKATDLALGWGVALGSPFMFETTLTSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMSPEQAFIESCESITGNIVKIISTKGIKAVYDGLNDDDKK-------------IFEEAYSASYMPAKEILQEIYDEVSSGNEIRTVIMHGKRIDKFPVGKIDGTDTW---QVGEKVRESRDEENIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGKPVDEDIISAFQNHRVHAAVTACCELRPSVDISVGSASSTKEIVI 535
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A7S4MXJ6_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXJ6_9STRA)

HSP 1 Score: 684 bits (1765), Expect = 3.730e-239
Identity = 338/514 (65.76%), Postives = 415/514 (80.74%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F + VF  Q + L  T E I+KGGRDLF LLPKAFEG+ KIGV+GWGSQAPAQAQN+RDSL+ +G    V IGLR  SAS+Q A++ GF+E++GTLGEM++ I +SDLV+LLI+DAA A  +++VFA +K GATLGLSHGFLLG+L+++G+ FP+D++V+AVCPKGMGPSVRRLYEQGK+VNG+GIN+SFAVHQD +GKATD+ALGW +ALGSPF F TTL  EY+SDIYGERGILLGAVHGIVE+L RR+ +QGMSPE+AF +S ESITG I KTIS +GI  +Y+ L    ++ F+ S             YSA Y P KEI+QE Y+EV+SGNEIR+V+M G RL+K   GKIDGT TWK   VGE+VRA+R E++IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+G++FMVDNCS TA+ GSRKWAPRFDYILEQLAYTA+D G  VD  L++DF  + VH+A+  C ELRP VDISC A ++ KE+++
Sbjct:   41 FTSDVFSPQDVQLADTTETIVKGGRDLFPLLPKAFEGVSKIGVIGWGSQAPAQAQNLRDSLDESGTEATVTIGLRPTSASYQQAKDAGFSEDEGTLGEMFDVIKQSDLVVLLISDAAQAKLYKEVFAAMKPGATLGLSHGFLLGYLESIGEAFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINSSFAVHQDKSGKATDLALGWGVALGSPFMFETTLTSEYKSDIYGERGILLGAVHGIVESLSRRYQRQGMSPEQAFTESCESITGNIVKTISTQGIKAVYDNLSDDDKKVFETS-------------YSASYMPAKEILQEIYDEVASGNEIRTVIMHGDRLDKFPVGKIDGTETWK---VGEKVRASRDEDNIPLNPFTAGVYVATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGIAFMVDNCSFTAKTGSRKWAPRFDYILEQLAYTAVDNGKEVDADLIADFQNHKVHEAVTACCELRPAVDISCTAETSTKEIVI 538
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A1Z5JEH0_FISSO (Acetohydroxy-acid reductoisomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEH0_FISSO)

HSP 1 Score: 680 bits (1755), Expect = 8.230e-238
Identity = 337/514 (65.56%), Postives = 413/514 (80.35%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F + VF+ Q +    T+E I+KGGRDLF LLPKAFEGI+KIGV+GWGSQAPAQAQN+RDSL   G +I V IGLR+GS+SF  A   GF+EE GTLGEM++ I ESDLVILLI+DAA A  ++++FA +K GATLGLSHGFLLG+LD++G+ FP++++V+AVCPKGMGPSVRRLYEQGK VNG+GIN+SFAVHQD +GKAT++ALGW +ALGSPF F TTL  EY SDIYGERGILLGAVHGIVE+L+RR+ +QGM+PE+AF ++SESITG I K IS +GI  +YE  + A + EF             Q  YSA Y P KEI+QE Y+EVSSGNEIR+V+M G R+NK   GKIDGT TW    VGE+VRANR E+ IP+NPFTAGVY+ATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+GV+FMVDNCS TA+ GSRKWAPRFDYIL+QLAYTA+D G  V+++L+ DF Q+ VH A++ C +LRP VDIS  A ++ KE+++
Sbjct:   30 FKSNVFKTQEVTFADTKETIVKGGRDLFPLLPKAFEGIKKIGVIGWGSQAPAQAQNLRDSLAEVGSDITVSIGLRKGSSSFSEANECGFSEEAGTLGEMFDVIKESDLVILLISDAAQATLYKEIFAAMKPGATLGLSHGFLLGYLDSIGESFPENMDVIAVCPKGMGPSVRRLYEQGKDVNGAGINSSFAVHQDKSGKATELALGWGVALGSPFMFETTLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMTPEQAFLETSESITGKIVKIISTQGIKAVYEQFNDADKAEF-------------QKAYSASYMPAKEILQEIYDEVSSGNEIRTVIMHGKRINKFPVGKIDGTDTWI---VGEKVRANRDEDKIPINPFTAGVYIATMMAQIDVLLEAGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGVPVNQQLIKDFEQHPVHSAVEECCKLRPAVDISLFAETSTKEIVI 527
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BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Match: A0A448ZSW9_9STRA (Acetohydroxy-acid reductoisomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSW9_9STRA)

HSP 1 Score: 680 bits (1755), Expect = 1.140e-237
Identity = 338/514 (65.76%), Postives = 422/514 (82.10%), Query Frame = 1 
Query:    1 FDTKVFEKQRIVLGGTEEDIIKGGRDLFSLLPKAFEGIEKIGVVGWGSQAPAQAQNIRDSLEAAGLNIPVKIGLREGSASFQLARNVGFTEEKGTLGEMYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDALGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNGKATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLFRRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFKASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRLNKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQIDVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSRKWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPPVDISCAAPSTVKEVIM 1542
            F + +FE   +    T+E I+KGGRDLF LLPKAFEGI+++GV+GWGSQAPAQAQN+ DSL+ AG +  V IGLREGS+SFQ A++VGF+EE+GTLGEMY+ I  SDLV+LLI+DAA A  ++++FA +K GATLGLSHGFLLG+LD++G+KFP+D++V+AVCPKGMGPSVRRLYEQGK+VNG+GIN+SFAVHQ+ +GKAT++ALGW +A+GSPF F T+L  EY SDIYGERGILLGAVHGIVE+L+RR+ +QGM+ E+AF  SSESITG ITK IS +GI  +Y+GL   + E+ K          I Q  YSA Y+P KEI+QE Y+EVSSGNEIR+V+M G RL++   GKIDGT TW    VGE+VRA+R +E+IPLNPFTAGVYVATMMAQIDVL E GH Y+E+VNESVIEAVDSLCPYMHY+GV+FMVDNCS TA+ GSRKWAPRFDYIL+QLAYTA+D G  V+E+L+SDF  + VH A++ C +LRPPVDIS  A ++ KE+++
Sbjct:   39 FTSDIFEVTEVDFADTKETIVKGGRDLFPLLPKAFEGIKQVGVIGWGSQAPAQAQNMMDSLKEAGADTKVVIGLREGSSSFQEAKDVGFSEEEGTLGEMYDVIKNSDLVMLLISDAAQAKLYKEIFAAMKPGATLGLSHGFLLGYLDSIGEKFPEDMDVIAVCPKGMGPSVRRLYEQGKEVNGAGINSSFAVHQNVSGKATELALGWGVAVGSPFMFETSLRSEYCSDIYGERGILLGAVHGIVESLYRRYQRQGMTAEDAFLNSSESITGNITKIISTQGIKAVYDGL---SDEDKK----------IFQTAYSASYKPAKEILQEIYDEVSSGNEIRTVIMHGDRLDRYPVGKIDGTNTWT---VGEKVRADRDDENIPLNPFTAGVYVATMMAQIDVLLEEGHPYSEVVNESVIEAVDSLCPYMHYRGVAFMVDNCSFTAKTGSRKWAPRFDYILDQLAYTAVDNGVAVNEELISDFENHRVHQAVEECCKLRPPVDISLFAETSTKEIVI 536
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13206.2302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQZ4_ECTSI1.200e-31284.66Acetohydroxy-acid reductoisomerase n=2 Tax=Ectocar... [more]
A0A835Z8S5_9STRA1.030e-26371.98Acetohydroxy-acid reductoisomerase n=1 Tax=Tribone... [more]
A0A7S2W6X2_9STRA3.160e-25369.67Acetohydroxy-acid reductoisomerase n=1 Tax=Rhizoch... [more]
W7TPK9_9STRA8.310e-25168.90Acetohydroxy-acid reductoisomerase n=2 Tax=Monodop... [more]
B7GDA6_PHATC3.720e-24467.12Acetohydroxy-acid reductoisomerase n=2 Tax=Phaeoda... [more]
K0TKV8_THAOC1.090e-24166.73Acetohydroxy-acid reductoisomerase n=1 Tax=Thalass... [more]
A0A7S2PBH0_9STRA3.350e-23966.34Acetohydroxy-acid reductoisomerase n=1 Tax=Skeleto... [more]
A0A7S4MXJ6_9STRA3.730e-23965.76Acetohydroxy-acid reductoisomerase n=1 Tax=Odontel... [more]
A0A1Z5JEH0_FISSO8.230e-23865.56Acetohydroxy-acid reductoisomerase n=2 Tax=Fistuli... [more]
A0A448ZSW9_9STRA1.140e-23765.76Acetohydroxy-acid reductoisomerase n=1 Tax=Pseudo-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13206contigH-elongata_contig13206:439..8122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score701.8
Seed ortholog evalue1.9e-199
Seed eggNOG ortholog2880.D7FQZ4
KEGG rclassRC00726,RC00836,RC00837,RC01726
KEGG koko:K00053
KEGG ReactionR03051,R04439,R04440,R05068,R05069,R05071
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
GOsGO:0000166,GO:0000287,GO:0003674,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0030312,GO:0031967,GO:0031975,GO:0036094,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048037,GO:0048046,GO:0050661,GO:0050662,GO:0050896,GO:0070402,GO:0071944,GO:0097159,GO:1901265,GO:1901363
EggNOG free text desc.ketol-acid reductoisomerase activity
EggNOG OGs2QQBF@2759,COG0059@1
EC1.1.1.86
COG Functional cat.EH
BiGG ReactioniRC1080.CRv4_Au5_s10_g343_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons11
Model size2188
Cds size1254
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929784.0326884-UTR-H-elongata_contig13206:438..5641622929784.0326884-UTR-H-elongata_contig13206:438..564Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 439..564 +
1691679156.150886-UTR-H-elongata_contig13206:438..5641691679156.150886-UTR-H-elongata_contig13206:438..564Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 439..564 +
1622929784.048519-UTR-H-elongata_contig13206:1018..10991622929784.048519-UTR-H-elongata_contig13206:1018..1099Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 1019..1099 +
1691679156.1603284-UTR-H-elongata_contig13206:1018..10991691679156.1603284-UTR-H-elongata_contig13206:1018..1099Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 1019..1099 +
1622929784.0651672-UTR-H-elongata_contig13206:2338..24251622929784.0651672-UTR-H-elongata_contig13206:2338..2425Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 2339..2425 +
1691679156.1699913-UTR-H-elongata_contig13206:2338..24251691679156.1699913-UTR-H-elongata_contig13206:2338..2425Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 2339..2425 +
1622929784.2289064-UTR-H-elongata_contig13206:7482..81221622929784.2289064-UTR-H-elongata_contig13206:7482..8122Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 7483..8122 +
1691679156.2526104-UTR-H-elongata_contig13206:7482..81221691679156.2526104-UTR-H-elongata_contig13206:7482..8122Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig13206 7483..8122 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929784.083285-CDS-H-elongata_contig13206:2425..24271622929784.083285-CDS-H-elongata_contig13206:2425..2427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 2426..2427 +
1691679156.1772847-CDS-H-elongata_contig13206:2425..24271691679156.1772847-CDS-H-elongata_contig13206:2425..2427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 2426..2427 +
1622929784.0964422-CDS-H-elongata_contig13206:2794..28911622929784.0964422-CDS-H-elongata_contig13206:2794..2891Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 2795..2891 +
1691679156.1842754-CDS-H-elongata_contig13206:2794..28911691679156.1842754-CDS-H-elongata_contig13206:2794..2891Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 2795..2891 +
1622929784.1117427-CDS-H-elongata_contig13206:3270..34591622929784.1117427-CDS-H-elongata_contig13206:3270..3459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 3271..3459 +
1691679156.1914666-CDS-H-elongata_contig13206:3270..34591691679156.1914666-CDS-H-elongata_contig13206:3270..3459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 3271..3459 +
1622929784.1238568-CDS-H-elongata_contig13206:3992..41721622929784.1238568-CDS-H-elongata_contig13206:3992..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 3993..4172 +
1691679156.1985283-CDS-H-elongata_contig13206:3992..41721691679156.1985283-CDS-H-elongata_contig13206:3992..4172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 3993..4172 +
1622929784.1384325-CDS-H-elongata_contig13206:4501..46671622929784.1384325-CDS-H-elongata_contig13206:4501..4667Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 4502..4667 +
1691679156.2064571-CDS-H-elongata_contig13206:4501..46671691679156.2064571-CDS-H-elongata_contig13206:4501..4667Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 4502..4667 +
1622929784.1598458-CDS-H-elongata_contig13206:5185..53501622929784.1598458-CDS-H-elongata_contig13206:5185..5350Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 5186..5350 +
1691679156.2182655-CDS-H-elongata_contig13206:5185..53501691679156.2182655-CDS-H-elongata_contig13206:5185..5350Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 5186..5350 +
1622929784.1749256-CDS-H-elongata_contig13206:5673..58701622929784.1749256-CDS-H-elongata_contig13206:5673..5870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 5674..5870 +
1691679156.2288854-CDS-H-elongata_contig13206:5673..58701691679156.2288854-CDS-H-elongata_contig13206:5673..5870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 5674..5870 +
1622929784.194794-CDS-H-elongata_contig13206:6547..67271622929784.194794-CDS-H-elongata_contig13206:6547..6727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 6548..6727 +
1691679156.237099-CDS-H-elongata_contig13206:6547..67271691679156.237099-CDS-H-elongata_contig13206:6547..6727Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 6548..6727 +
1622929784.2078123-CDS-H-elongata_contig13206:7404..74821622929784.2078123-CDS-H-elongata_contig13206:7404..7482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 7405..7482 +
1691679156.2447743-CDS-H-elongata_contig13206:7404..74821691679156.2447743-CDS-H-elongata_contig13206:7404..7482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13206 7405..7482 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13206.2302.1prot_H-elongata_contig13206.2302.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13206 2426..7482 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13206.2302.1

>prot_H-elongata_contig13206.2302.1 ID=prot_H-elongata_contig13206.2302.1|Name=mRNA_H-elongata_contig13206.2302.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=418bp
MYETIAESDLVILLIADAAMAANHEKVFAKLKKGATLGLSHGFLLGHLDA
LGKKFPKDINVVAVCPKGMGPSVRRLYEQGKKVNGSGINASFAVHQDSNG
KATDIALGWSIALGSPFTFPTTLADEYRSDIYGERGILLGAVHGIVETLF
RRFVKQGMSPEEAFRQSSESITGPITKTISKEGIVKMYEGLDKAAQEEFK
ASSGSSSSNIIIQAVYSACYEPVKEIMQECYNEVSSGNEIRSVVMQGGRL
NKINTGKIDGTFTWKAEQVGEQVRANRVEEDIPLNPFTAGVYVATMMAQI
DVLKENGHSYTEIVNESVIEAVDSLCPYMHYKGVSFMVDNCSTTARLGSR
KWAPRFDYILEQLAYTALDEGATVDEKLMSDFFQNDVHDAIKVCAELRPP
VDISCAAPSTVKEVIMA*
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mRNA from alignment at H-elongata_contig13206:439..8122+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13206.2302.1 ID=mRNA_H-elongata_contig13206.2302.1|Name=mRNA_H-elongata_contig13206.2302.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7684bp|location=Sequence derived from alignment at H-elongata_contig13206:439..8122+ (Himanthalia elongata Himel1 dioecious)
TTCGACACGAAGGTGTTTGAAAAGCAGCGCATCGTTTTAGGAGGTACCGA
AGAGGACATCATCAAGGGGGGTCGTGATCTCTTCTCCCTCTTGCCTAAGG
CTTTCGAAGGGATAGAAAAAATCGGGGTAAGTCTTGCTTTGGGAAAAGAC
ACACCTAGGAGATGGAAATGTTCAACGCCTGTTATTGTTCCGGTATCTCT
CGAGTTTCCTCCGACCCTGCGCTCCTTTCTATACTGTTGTAATGGATAGT
TAGAGCATCTCGATATGCACTCTCAGCTCGACCCGATTTGTAGCTAGATT
GTCGTGCCTTGTACATAAAAAAACTCGAGTACTTAACATTGCTTCATGTT
TGGCACGGATACTGACTGACTGACTGACTGTATCAACTATACTATACTGT
ATCAACTATACTGTATCAACTATACTATACCAGTACTATCTATATTTACG
GCCTCTTTTCGTTTCGTGTTTCCTCACAAATTCATATATTCATATAATTT
ATCGTCTAGCGAAGTAACCCTCTTCGTGTGTCGGTGTCTTATTGCCTCAT
GTTGGACACGCCGATGTCGCTGGACCCCAGGTGGTGGGATGGGGATCTCA
AGCTCCCGCCCAGGCGCAAAATATACGAGACTCGTTGGAGGCTGCAGGCC
TCAACATCCCGGTGAGCGCTGAGCCTTTTTCCGTATATCAAATTTGCGTC
GCAGGGACCCGGACACATCAGTACTGCACTGTACTGTACTATACTGTACT
GTACTGTACCGCAGTAGTGTACTATAATATACAGTATCAAACTTTGCTAT
AATATACTTGGTATTATGATGTCCTATAATCGCTAATCATTTGGAAGAGG
CATGGTGGAGAGACGATTACCTCCTGCCGATGGCCGATATAGTACACAGT
ATATATTATAATGGTACCATCGTTTTTTACATACTATATTCAATATAAAA
TTTGAAATCCAGTTCCAGAAGGGTTAACCCCTATGGAACTCGATCTGTTT
TTAAAATACTAAATTCAATATAAAAATCAAATCCAGTTCCGAAGTAATGT
GAATGTTAATAGTTGATCAATCTTATCTATTAGTATTAATATTACAACGT
TGCTAACCCTACTGTGGCCACTGTGGTGCCAAGATGTCAAACCAGTTCTC
CCCCGGTTCACCCTTAAACCTCTATATACACCTCACCTCACCTCCCTCAG
ACAATGGTCGAACTTTTCTTACTCCCATTATGTTTTTATACGGTTGAATA
CCCTGCTGAAGAACCACTCTAGATTATTTTATGAAGAACCATTCCTGGTG
AGAATCGAACTCGTGACTTCCGCACTAACAGGGTTACGTTACCGTACATT
ATTCTTAATAGCAATTAGACTACTCTACTGTTCTGTACTCTACTGTACTG
TACTGTACTCGAGACGATAATTAATTTTCTCAACTTCTCTCTAGGTGCCG
GGAAAAGAAGGGTTGAATCATCATTTTTGAACCCGTGGCTCTTCGTTTAA
TTGTTCTCCGATAAGACCGCGTCGCGACAGCATACGCAGTTCGTTAACAA
CTATGTGTGTTCTCTTTTTTGTATTTCTGAATTTTTCTTTGGAGATGTCG
CTTTTTCCGAGTATTTGTTTTATGCACCATTTGCCGTTTCATTTTGTATT
GGAAAGTACGTAAAACGTGTTTTCCTTTCAGATGGTGTTTTTTCTATATT
GCGACCACGGGCTGGATTTTGACATCAGCTTATGTGATAATTCAATCAAT
CAATCATCAATCTGTTTACCTATATTTTCGAGGGATCATTGCTCGCGTCC
AAACGACGTACGTCTGGATGCAACTTTTGAACGCCGGCCTTTTGTATCTC
GTCAAATCGTTTATGGTCGGTTTTGGCCCGGGGATCGGATTTTCATTTAG
GTCAAGATCGGCCTAAGGGAGGGATCGGCGTCGTTCCAGCTCGCCAGGAA
TGTCGGTTTCACGGAGGAAAAGGGCACGCTCGGGGAGATGTAAGCGCCTC
ATTATGTCTTGATTACTCTTTTCGACTTCCCCCCTACTCTTTCGGGGTAA
CTCTTATCCTACACGGCACGGCTGGGTATTCCATGAGAGCGCTGCCGGTG
ATACCCTTAAGAGCTACAGGTACATACAGACGGCTGATAAAAAGGGTTGT
ATGTGAGCCGCTTGCGAGCCTCTGAGCTATGCTACATATCCCATACTTTT
CAATAAATATGATGAGCTTGCGTAGGGTCCTACTTGCATTTCCAAAGATC
ATAGCTCAAGATCATGTCTCCACCATCGTGATGACTACCGGTATTCGTCA
TTGCCACATGCTGGTCCTTAACTCGATTCTATTTTCGTGGGTTTTGTATG
TTTCAGGTACGAGACGATTGCGGAGAGCGACTTGGTGATCCTGCTTATTG
CTGATGCAGCCATGGCCGCCAACCACGAGAAAGTCTTCGCAAAGCTCAAG
AAGGTAATCGCACGAACCGTAGAGCTGCCTACTCGCTAGTCGTCTTCCGA
CGCTCGGCTTCTGTGCTCGACCCGTTTTTTCCTTCCGTGGTGCTGAAGCT
GTGTAATCGTACGTTTTCTTCACGTCCCCTTGATGACGTCACCCTTAGGT
CCCGTTCGAGGCGTTGCGCCCGCGCGATCGTTTTTGGATCGACACCTCTC
CAAACCTAGCGCTAAGTGGGTGTAGACCGACCGATTTCTTAATTTGGCGG
AGTATGTAATGTCGCTGCCGCGATGAAAGTGAAGGGAGCTACCGACTGTC
AGGGTCCCTTTCGCGAGTCCGTTTGACGACGCCACTCCTTTGCGCGCTGG
GGGTGGAATACGCTCTTCTTTTTCTCCCACAGGGTGCTACGCTCGGCCTC
TCCCATGGATTCTTGCTAGGACACCTCGACGCCCTCGGCAAGAAATTCCC
CAAGGACATCAATGTAGTGGCCGTTTGCCCCAAGGGCATGGGGCCCTCCG
TGCGGCGCCTGTACGAGCAAGGGAAGAAAGTCAACGGCTCCGGCATTAAC
GCCTCCTTCGCCGTTCACCAAGTGTGTATATCTTGCCAGAGGGGGTGTAG
GTTGTTGCTGATATGACGACAGGCTGCGTTCGTCGTTAAAAATACTTCCA
CGCGAACAAACACCTTCCTATACTCCGATACCTTTTGAGCTACGGTCGAA
CGGGCGATGGTTCCGACTTGAATATCTGTTATGTTTTTGGTCATGTCGAA
GATTATTTCGAAAGCGAGCTGCTCCTTCCCCTCGTGCAAACGATAAAAGT
AGCCTTGCCCTTGGCGTTGAGGTAAACTTCTTAAAAAAACGCCTCTGAAA
TACTGATCGTACCTCATCGTGCCTTCCTGCCGCTTACTAATACTATTAGT
ATTAGTACCTATTAAAACCTATTTATTAATACTTGACTCTAGTATCCGCG
ATCGTTCTTTGCTATACCGATACGCAGGATGATGCATCGTTTCGCGGCCA
CTTTTTTTTCTACTCTATTTTTTCACCTGTGTGCTGTGGTGGTTTTGTGT
GGCCTATAACCTACCTACCTACCTACCTATCGTTGGGTGCTGCCGCGTCA
CAAGGACTCCAACGGCAAGGCGACAGACATCGCCCTGGGGTGGTCCATCG
CCCTCGGGTCCCCGTTTACATTCCCGACGACCCTGGCGGACGAGTACCGT
AGCGACATCTACGGGGAGCGAGGCATCCTCTTGGGCGCCGTGCACGGGAT
CGTCGAGACACTCTTCCGGCGCTTCGTGAAACAGGTATGATCGAAGAGGC
TTGAGGAGGAAAAAGAGACGACAGGCGGTCGTGACGTAGCGGCACACGAA
AGAGCGCGTGCAGTGGGTTGTAACTGGTAGTTTTTCTGTAATTTACGCCA
GCACTTGGAGTATTCTCGTGAGTGTGACGTGTATATGTGTGTTTGTGGAA
ACCAAAGCAAAGCAAGGTAAGGCATGAAAGCCGTGAAAGCGGCACGATAT
GTTGAGACTGTTTCGGATTTCACTCTGCGGCACGATATATTACGACGATG
CTCAACTTGTCTTGTACGTGATTGTTTTTTTGTGTTTGGACATTAATTAT
GGTACATTCCAAGGGCATGAGCCCCGAGGAGGCCTTCAGGCAGTCATCGG
AATCCATCACCGGCCCCATCACGAAGACCATCAGCAAGGAAGGCATCGTC
AAGATGTACGAGGGGTTGGACAAGGCCGCCCAGGAAGAATTTAAGGCGAG
CAGCGGCAGCAGCAGCAGCAACATCATTAGTACCAGCATAATCTTGCAGT
AGTGCGTACGATCGATTCATTGATATATCGATGTATCGATATCGTTAAAA
GTGGCGAGGGAAGGGTCGATGCACATGCCTATTCAGTGCGTAGAATATTT
TGTCACGCTGCGAGGCTTGGCCACAAGCGTTGACGTCTCGAGACGATGGT
CCTCTCGCTTCGCCATGTAGAGTTGCTGCCTCTCTTGCTCTTGGATGGTA
CTATTATTAGTACATAGTACATCATCAGTGCTAGCTCTAATGTTTAATGT
GAACATTCTCCCTCGGCTCTTGAAGCTCAAAAACCTTTTGTATGTTATTT
ATTTCACATGTAGTTTCTCTATGTTTATATTTGTCTGCTGCTTTGTCAAT
CAATGCTTGTCTCTCCATATTCCTTTCATGATTAATCTCGTATTCCTTAT
GATACGCTGCATTTGTGAGCGTCTCCACTCTGTCCCGTTTCTCGTGGAGA
AAGCAACCTACAAAAATTAAAATAAAACCTCCGCATCGACAACAAAGTAC
AGGCGGTGTACTCAGCCTGCTACGAGCCCGTGAAGGAGATCATGCAAGAG
TGCTACAATGAGGTCAGCAGCGGAAACGAAATCCGTTCGGTGGTAATGCA
AGGAGGGCGCCTCAACAAGATCAACACTGGCAAGATCGACGGTACCTTCA
CCTGGAAGGCGGGTCGACATAATACATGATACGTCATACATGAAGTAATG
CATCGCAGTACAGTGTAGCGTACGTATCTTGTCATTCGCTACGCCACAAA
AGATGCCAAATGCGATGGGGAAAATGGGAGTAAGTTGTGTAGCACAAGAG
GCTCGAAGAGCATCTTGTGGCAGGTGAAAGCGCAGATATAATTTGCGATT
GTGTCGGACTTTTCCGTTTCAGGCCCTTGTTTTCAAGAGCCGTCGCGGTA
CCGTGGACCTTAGGCTACATCCCACACGTGGTTCATCGTTGAGCGAGCGA
TCCTCTGCCGCTACCTATCCCTGTCCTATCGAGAGAACAGGTGGGAGAGC
AGGTCCGCGCCAACCGTGTCGAGGAAGATATCCCTCTAAACCCCTTCACG
GCAGGAGTGTATGTGGCGACCATGATGGCACAGATAGACGTGCTCAAGGA
AAATGGACACTCTTACACGGAGATTGTAAACGAGTCTGTTATCGAGGCGG
TGGACTCCTTGTGCCCCTACATGCACTACAAGGTGACGAGGGTCAGGTGT
TTTGATGTTGTTGGGGGGGCGTTGAAATGGACGGGGAGTGGGTCGTCGAC
TGCGCGGTCGGTCAATCCCACCGCTTGAGTGTTCTGGGAGGGGGAATGAA
TAAGATCTTCACCCATTAGGCTCAATATTGTTTTGTATTGAAATACGCGA
GGGGAAGTGAAGCTTCCCGTTTTAGCTGCAGCTTGTATGGCTTGGACAGC
TTGTATGGCTTGTACAGTGTGTTCCCAGGTAATGAAAGAAACAAGCGAAT
GGGATAGGAAAACGGCGTTGAACGCCCCCTCGCTCCGCCCCTCACTCATT
ACTAGTATTGAAGGCAACCACACACCCTAACACATTCCCGGCCGATCAGC
CGATCACGCGAAAAAGGGTCGGATAAAGACACAAATTCCCCACCGGTCGA
TAGGCTCAAGAAATTGACTCATATTGATCATCTCGCTAAATCAATTGAAC
CATAGAGGTTTGGCGTTGCGTCGGGTGTATGCGAGGAATCGTATCCATAA
ATCAAAACGTTCTGGGAACGTAAAGGGCAGCCTTTGCGAAGGCCTAGAAG
TAAGTGGGCATTACTTGACCCTTCCGTTACTTACCGTCAATGTTTTTGCT
CATTTCATCATTATGGTGTCGTGTGTGTTGAAAACGTCTATGAACCGTCC
TTCGAGCAGGGCGTGTCATTCATGGTGGACAACTGCTCTACGACCGCGCG
GTTAGGCTCCCGCAAGTGGGCCCCCCGGTTCGACTACATCCTCGAGCAGC
TTGCGTATACTGCTCTTGACGAAGGAGCAACGGTGGACGAGAAGCTAATG
TCCGACTTCTTCCAGAATGACGTACACGATGCCATCAAGGTAAGACAACA
AACCGATCGCCCCAGTGGTTCAGTTAGTAACTTCGAAACCCACTGGCGTT
GGGACGTGAGTTCGAATCTGGGTGCAGTCACACGAACTGAGATTTTCTCT
CAGATCATGCCCAACGAGTCGAAAAATATAATTTCGTGTGTACACAAAAT
TCGATATACTTGACGGTCGACGAGGGAAAAGGGACTTTGACTGCTGAATC
CTTCTTGTGATAAAAGTGATAGTAAGGTAAGCAACACAGAAGAAAAGTGG
GGAAATCCTGTGTGGCGTTCATGTGTGACTCCGACTTGTGCTTCCACAAT
TCTAACGCCCAGAATAAATGGGATGATAACGACATTCCTGTTTGGTGGTT
GCTCGAGGAAAAAATCCTTGAAAACTGCTATTATTAGTTTGGTGCTATGT
GGGGGCGTGAGAATGTACTCGTGAAGCGTGAGTCTCTTTCGCGATACGGT
GGTACCCGACAGACTCTTGACTACGATGGCGTAGTGCTTTCGCTCGATTC
GTTTTACTGAATGATACAAGAGGAAAACCTCACGAGGTGTCATGTCATGT
ACTGTAAAACATTATGTCGCATTATAGGGTGCATCATGTCCGATGTAACT
CAGATACTAATTCGATATAACTCAAATATTTATTTCGAATTATTTTGTAA
TTGCATTTGATCGCAGGTTTGCGCGGAATTGAGGCCACCGGTTGACATAT
CGTGCGCTGCGCCATCTACCGTCAAGGAGGTCATCATGGCCTAAAAAAAT
CAAGCGTGCAAGAAAGCAATAACTACGATGCCTTAAAGGAGCTGCTACTC
TACTACGCATCGCGTTACTATAGCTTGTCGGTTTTTGGGTTGATGGTGGT
GCCCGGCTTAACATTCTTCTCTCTTTCAATAATAGTTTGCTATAGCTGCC
GTGCCGTGCCGTCAAAGAGTTTGTGAGAAAAGCAAGTGTTTCGAATGGGG
TATCACTTCCCATCCTTGCTTGTCTACCGGCTTTTGAATGATAGGCCTCA
AGAAGACTAAGCGATATCTTGAATAAAGTCGGATCTTCTGTTTATGACAT
CAGGTATCGGTATTGGGGAAATGACATTTTATTGATGTCCTGCTCAGTAA
CCGTTTATTAGTACCTGGTGATCCATTGAAGGCACTGTTCGTGTTAATTA
ACCTCTACCGGAGATCGCAAAGATGGAAACCCCACGAGTAGAAGGCAACC
AAATACGGTTGACCTTCTGCTAAAATTTTGCTACTGAAAGATACACTCTA
GGTTAGGCTACCCGAAATTTAACTGAAACATAATATGTACAATGCTGTGC
CTAACCCTTCCTAACAACCACACACACAGTTCACCACCTAGGCTTTGGTT
TGGCGTTCCCATATGATGAATAATCAAATATGAC
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Coding sequence (CDS) from alignment at H-elongata_contig13206:439..8122+

>mRNA_H-elongata_contig13206.2302.1 ID=mRNA_H-elongata_contig13206.2302.1|Name=mRNA_H-elongata_contig13206.2302.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2508bp|location=Sequence derived from alignment at H-elongata_contig13206:439..8122+ (Himanthalia elongata Himel1 dioecious)
ATATGTACGAGACGATTGCGGAGAGCGACTTGGTGATCCTGCTTATTGCT
GATGCAGCCATGGCCGCCAACCACGAGAAAGTCTTCGCAAAGCTCAAGAA
GGTACGAGACGATTGCGGAGAGCGACTTGGTGATCCTGCTTATTGCTGAT
GCAGCCATGGCCGCCAACCACGAGAAAGTCTTCGCAAAGCTCAAGAAGGG
TGCTACGCTCGGCCTCTCCCATGGATTCTTGCTAGGACACCTCGACGCCC
TCGGCAAGAAATTCCCCAAGGACATCAATGTAGTGGCCGTTTGCCCCAAG
GGCATGGGGCCCTCCGTGCGGCGCCTGTACGAGCAAGGGAAGAAAGTCAA
CGGCTCCGGCATTAACGCCTCCTTCGCCGTTCACCAAGGTGCTACGCTCG
GCCTCTCCCATGGATTCTTGCTAGGACACCTCGACGCCCTCGGCAAGAAA
TTCCCCAAGGACATCAATGTAGTGGCCGTTTGCCCCAAGGGCATGGGGCC
CTCCGTGCGGCGCCTGTACGAGCAAGGGAAGAAAGTCAACGGCTCCGGCA
TTAACGCCTCCTTCGCCGTTCACCAAGACTCCAACGGCAAGGCGACAGAC
ATCGCCCTGGGGTGGTCCATCGCCCTCGGGTCCCCGTTTACATTCCCGAC
GACCCTGGCGGACGAGTACCGTAGCGACATCTACGGGGAGCGAGGCATCC
TCTTGGGCGCCGTGCACGGGATCGTCGAGACACTCTTCCGGCGCTTCGTG
AAACAGGACTCCAACGGCAAGGCGACAGACATCGCCCTGGGGTGGTCCAT
CGCCCTCGGGTCCCCGTTTACATTCCCGACGACCCTGGCGGACGAGTACC
GTAGCGACATCTACGGGGAGCGAGGCATCCTCTTGGGCGCCGTGCACGGG
ATCGTCGAGACACTCTTCCGGCGCTTCGTGAAACAGGGCATGAGCCCCGA
GGAGGCCTTCAGGCAGTCATCGGAATCCATCACCGGCCCCATCACGAAGA
CCATCAGCAAGGAAGGCATCGTCAAGATGTACGAGGGGTTGGACAAGGCC
GCCCAGGAAGAATTTAAGGCGAGCAGCGGCAGCAGCAGCAGCAACATCAT
TAGGCATGAGCCCCGAGGAGGCCTTCAGGCAGTCATCGGAATCCATCACC
GGCCCCATCACGAAGACCATCAGCAAGGAAGGCATCGTCAAGATGTACGA
GGGGTTGGACAAGGCCGCCCAGGAAGAATTTAAGGCGAGCAGCGGCAGCA
GCAGCAGCAACATCATTATACAGGCGGTGTACTCAGCCTGCTACGAGCCC
GTGAAGGAGATCATGCAAGAGTGCTACAATGAGGTCAGCAGCGGAAACGA
AATCCGTTCGGTGGTAATGCAAGGAGGGCGCCTCAACAAGATCAACACTG
GCAAGATCGACGGTACCTTCACCTGGAAGGCGGTACAGGCGGTGTACTCA
GCCTGCTACGAGCCCGTGAAGGAGATCATGCAAGAGTGCTACAATGAGGT
CAGCAGCGGAAACGAAATCCGTTCGGTGGTAATGCAAGGAGGGCGCCTCA
ACAAGATCAACACTGGCAAGATCGACGGTACCTTCACCTGGAAGGCGGAA
CAGGTGGGAGAGCAGGTCCGCGCCAACCGTGTCGAGGAAGATATCCCTCT
AAACCCCTTCACGGCAGGAGTGTATGTGGCGACCATGATGGCACAGATAG
ACGTGCTCAAGGAAAATGGACACTCTTACACGGAGATTGTAAACGAGTCT
GTTATCGAGGCGGTGGACTCCTTGTGCCCCTACATGCACTACAAGAACAG
GTGGGAGAGCAGGTCCGCGCCAACCGTGTCGAGGAAGATATCCCTCTAAA
CCCCTTCACGGCAGGAGTGTATGTGGCGACCATGATGGCACAGATAGACG
TGCTCAAGGAAAATGGACACTCTTACACGGAGATTGTAAACGAGTCTGTT
ATCGAGGCGGTGGACTCCTTGTGCCCCTACATGCACTACAAGGGCGTGTC
ATTCATGGTGGACAACTGCTCTACGACCGCGCGGTTAGGCTCCCGCAAGT
GGGCCCCCCGGTTCGACTACATCCTCGAGCAGCTTGCGTATACTGCTCTT
GACGAAGGAGCAACGGTGGACGAGAAGCTAATGTCCGACTTCTTCCAGAA
TGACGTACACGATGCCATCAAGGGCGTGTCATTCATGGTGGACAACTGCT
CTACGACCGCGCGGTTAGGCTCCCGCAAGTGGGCCCCCCGGTTCGACTAC
ATCCTCGAGCAGCTTGCGTATACTGCTCTTGACGAAGGAGCAACGGTGGA
CGAGAAGCTAATGTCCGACTTCTTCCAGAATGACGTACACGATGCCATCA
AGGTTTGCGCGGAATTGAGGCCACCGGTTGACATATCGTGCGCTGCGCCA
TCTACCGTCAAGGAGGTCATCATGGCCTAAGTTTGCGCGGAATTGAGGCC
ACCGGTTGACATATCGTGCGCTGCGCCATCTACCGTCAAGGAGGTCATCA
TGGCCTAA
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