mRNA_H-elongata_contig13197.2297.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: D7FV63_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV63_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 5.450e-175 Identity = 235/335 (70.15%), Postives = 272/335 (81.19%), Query Frame = 1
Query: 1 KAPAKAPKAATRPGTSGRRTWSTALSWVIVLGVALAYRFYNDRRVAERELPREGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKADLYPGLGWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKDIWNELAFQTMRELGYVSSEGW 1005
KAP K A + + +W +++W+ VL VAL YRF ++R+++ RELP D+FVVSYPKSGNFWVRFLLAHTWLYS ES WHREIDFNSIE TIPDLEYGPNRRDY LHDK RAFKSHQPF P AV GKCA TVG MDD+QCACPNCPPKWRRILH+VRDGRDVMCSYYHFR GL NL+PPDM FEEFLKAD YPG WA+HV SYLDL+GNS+YD+LTVKYEDL ET+ E+ +WAGLDH+EK ++RA+ +SSFKSMR+KEEA GL IFDE+Y DRD+ WRMTRKG+AGGWEECFT+P SKDI+NELA+ T+ LGYV + W
Sbjct: 15 KAPCKPSNAESGEKEPRKGSWVPSITWLFVLAVALIYRFVDERQISTRELPLPSDLFVVSYPKSGNFWVRFLLAHTWLYSQPGESN--WHREIDFNSIERTIPDLEYGPNRRDYQLHDKFRAFKSHQPFAPKAVAGKCADTVGTMDDHQCACPNCPPKWRRILHLVRDGRDVMCSYYHFRMGLNNLDPPDMGFEEFLKADTYPGFTWAEHVNSYLDLKGNSSYDVLTVKYEDLHRAPLETLVEVSKWAGLDHSEKVLQRAIVRSSFKSMRRKEEARGLLIFDEKYPDRDKSWRMTRKGEAGGWEECFTSPASKDIFNELAYDTLFGLGYVQDKRW 347
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A7R9UAB6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAB6_9STRA) HSP 1 Score: 232 bits (592), Expect = 4.730e-67 Identity = 125/351 (35.61%), Postives = 199/351 (56.70%), Query Frame = 1
Query: 73 LSWVIVLGVALAYRFYNDRRVAERELPREGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRA-----------------FKSHQPFVPAAVPGKCAATVGR-MDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKADLYPGLGWADHVKSYLDL--------RGNSTYD------ILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKD--------IWNELAFQTMRELGYVSSEGW 1005
L+ +++ + Y D+++ LPR D+ + S+P+SG+FWVRF+LAH A +AV +DF+++E+ PDLEYGPNR+ Y DK A +KSH P + A P C ++G ++++ C CPNCPP ++R++++VRDGRDVMCSYY F++ L + E + +F EFL++++YPG+ WA H SY D G S D +L ++YEDL + I+++ G+ E ++ ++ KS ++ MR+ EE GL++FD+ Y+ RD +R+ RKG+ G W ECF S + ++N +F TM++LGY+ E W
Sbjct: 11 LAMALLVAALIPLGAYLDKQM---RLPRSSDVLLASFPRSGSFWVRFMLAH------AAVGDAV---VVDFHNLEELFPDLEYGPNRKIYVGEDKPSAEQEGFMRLHKRVELPPIYKSHMPLIAGAEP-PCFDSIGPGVEEFACQCPNCPPHFKRVIYLVRDGRDVMCSYYSFQKTLGH-ESANATFVEFLQSEVYPGVSWAKHASSYSDFPTPEVSAASGKSEADEQKAPEVLWLRYEDLHEDPLRELKRIMKFLGVRATEVVLKESVRKSGYEVMRETEEDGGLKLFDKHYSQRDPSFRVVRKGKVGSWRECFAKEGSPEEIDEEARKVFNAESFATMKKLGYLEDENW 347
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A7S1U3P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3P1_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.890e-66 Identity = 129/337 (38.28%), Postives = 189/337 (56.08%), Query Frame = 1
Query: 88 VLGVALAYRFYNDRRVAERELPREGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRA-----------------FKSHQPFVPAAVPGKCAATVGR-MDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKAD-LYPGLGWADHVKSYLDL--------RGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECF----TTPVSKDIWNELAFQTMRELGYVSSEGW 1005
++ V L Y D R + PR D+ +VSYP+SG+FW+RFLLA A +++ IDF+++ED PDLEYGPNR Y +++ +KSH P A P C +VG + + C CPNCP KWRR++++VRDGRD +CSYY+F++ L D F +FL+A+ LYPG+ WA+HV+SYLDL ++L V+YEDL + + ++ + G+ + IR A+ KS F SMR++EE GLR+FD Y+DR +R+ RKG+ G WE+CF +++ +N M++LGYV S W
Sbjct: 15 LIAVLLPLASYLDER---SKAPRAEDVLLVSYPRSGSFWLRFLLAQ------AARGDSL---NIDFHNLEDIFPDLEYGPNRAVYVGAEEMSTDYKEVRRERPRVRLPEIYKSHMVHRPGAEP-PCDVSVGPGLHETACECPNCPEKWRRVIYLVRDGRDALCSYYNFQRNLGAENTAD-GFSDFLRAESLYPGVSWAEHVRSYLDLPTPGVASGASEEGPEVLWVRYEDLHADPAKELRRVLNFLGVRATDVVIREAVRKSEFSSMREQEEDGGLRLFDRHYSDRQEEFRVVRKGKIGSWEDCFGKNGAFEEAREAFNAENLDVMQKLGYVESARW 337
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A7S2UZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZE9_9STRA) HSP 1 Score: 182 bits (461), Expect = 7.290e-48 Identity = 107/285 (37.54%), Postives = 159/285 (55.79%), Query Frame = 1
Query: 151 PREGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKL------------------RAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKA--------DLYPGLGWADHVKSYLDLRGN-STYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAI-RRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECF 921
P+ D+ + S+P+SG+FW+RFLLA +Y ++FNSIED IPDLEYGPNR Y DK R +KSH+P M Y+ CPNCP +W+RI+++VRDGRDVMCSYY+F++ L + + +F EFL +YPG+ W DHV S+ ++ + S+ IL V+YEDL T+ + + +I + + E +I ++A+ SS + M++KEE G ++FD+ + RD+ +R+ RK GGW ECF
Sbjct: 56 PKPEDVLIASFPRSGSFWLRFLLAEI-MYGNDKNF-------VNFNSIEDIIPDLEYGPNRA-VYNGDKRPTPSMEKVMMRNPRIILPRFYKSHEP----------------MHRYRTMCPNCPGEWKRIIYIVRDGRDVMCSYYNFQKNLGHNTAMNKTFLEFLTEFSDPKDGPPIYPGVTWGDHVMSFFEVDDDPSSPQILWVRYEDLHTRPKKVLQDIFEFLEVTIPEDSILQQAIDASSKEKMKRKEEEGGAKLFDKHHAMRDQDFRVVRKAVTGGWAECF 315
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A5D3WJK7_9DELT (Sulfotransferase domain-containing protein n=1 Tax=Geothermobacter ehrlichii TaxID=213224 RepID=A0A5D3WJK7_9DELT) HSP 1 Score: 120 bits (302), Expect = 5.610e-27 Identity = 92/290 (31.72%), Postives = 143/290 (49.31%), Query Frame = 1
Query: 157 EGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLH--DKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLE---PPDMSFEEFLKADLYPGLGWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFT-TPVSK--DIWNELAFQTMRELGYVSSEG 1002
+ DIF+VSYPKSGN WVRFL+A+ +Y R+++F SIE +PD+ D+++ + R KSH+ F P+++R+L++VRD RDV+ SY++++ +R ++ P D + F+ DL P W D+V S+L R S+ + + V+YEDL + +IV++ GL NEK I A+ SS M+ E+ G + D R+G GGW+ + V+K + W EL + ELGY EG
Sbjct: 26 DDDIFIVSYPKSGNTWVRFLVANV-VYKD---------RQVNFGSIERLVPDIY---QHSDFFIRCVSRPRFIKSHEYF--------------------------DPRYKRVLYIVRDPRDVVVSYWYYKVKIREIKDGFPMDEFVDRFVSGDLDPFGSWGDNVGSWLGARKYSS-NFMLVRYEDLSSDPVLVTKKIVQFFGLARNEKDIISAVNNSSINHMKDLEKKDGQNWKPMKKARSD--IPFVRQGSVGGWKNVLSDVSVAKIENSWREL----LVELGYDVGEG 269
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: UPI000403C5B0 (sulfotransferase domain-containing protein n=1 Tax=Algoriphagus vanfongensis TaxID=426371 RepID=UPI000403C5B0) HSP 1 Score: 118 bits (295), Expect = 4.580e-26 Identity = 79/282 (28.01%), Postives = 142/282 (50.35%), Query Frame = 1
Query: 163 DIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKADLYPGL----GWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATG--LRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKDIWNELAFQTMRELGYV 990
D+F+VSYPKSGN WVRFLL + V + DF+++E IPD+ Y N + + R KSH+ F P +++++++VRD R V SYY++ + + + P +M F+ FLK+ L L W+++V+S+L +GN+ + + +KYEDL T+I+++ +D +++ I ++ SSF +M+K E+ ++I + + + RKG+ W++ F + ++ +TM++L YV
Sbjct: 30 DVFIVSYPKSGNTWVRFLLGN------------VLNLNYDFSNMESLIPDI-YVVNNNELLKQRRPRILKSHEYFHP--------------------------NYKKVIYIVRDPRSVAVSYYYYLKKVNKI-PSEMQFKPFLKSYLSGSLDSYGSWSENVESWLSTKGNNENEFILIKYEDLLLNTNLEFTKILKFIDIDVSDEVIANSVNNSSFINMKKNEKLNSGNIKILN----NSNENIAFVRKGEIDEWKDYFDSEDLDLLYYHFG-KTMKKLDYV 266
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A3M1MHB3_9CHLR (Sulfotransferase domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3M1MHB3_9CHLR) HSP 1 Score: 117 bits (292), Expect = 1.030e-25 Identity = 88/296 (29.73%), Postives = 138/296 (46.62%), Query Frame = 1
Query: 127 RRVAEREL--PREGDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHRE-IDFNSIEDTIPDLEYGPNRRDYYLHDKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKADLYPGLGWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKDIWNELAFQTMRELGYVSSEGW 1005
RR+ +R+ PR D+F+VSYP+SGN WVRFLLA+ + HRE +DF+++ D IPDLE R KSH P+ P D+Q R+++++RDGRDV SYY++ QG + +P ++ E AD P W HV + +T D L V++EDL++ + + + GL ++ + A+ +SS ++M++ E G Y R+G++GGW F K + + ELGY ++ W
Sbjct: 13 RRINKRKTFHPRPDDVFLVSYPRSGNTWVRFLLANLLNFP---------HREPVDFHTVHDIIPDLEIRAQWPHIRQMHPPRIIKSHAPYRP---------------DFQ-----------RVIYLLRDGRDVYTSYYNYLQG-QGKQPGTLA-EMIRDADCLPYGAWYAHVSGWCSYA--ATLDFLLVRFEDLRSTPLIELQRMAAFIGLSVSKAQLHWAVEQSSLENMKRLEVERGRPYGRSTYD-------FVRQGRSGGWRTHFNEDC-KAAFKARENNVLLELGYANTLEW 261
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A352XE18_9CYAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352XE18_9CYAN) HSP 1 Score: 117 bits (292), Expect = 1.130e-25 Identity = 93/285 (32.63%), Postives = 142/285 (49.82%), Query Frame = 1
Query: 163 DIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKL---RAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKA-DLYPGLGWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKDIWNELAFQTMRELGYVSSEGW 1005
D+F+VSYPKSGN WVRFL+A+ + E + +DF+S++ +P++ R+ DKL R KSH + ++ +++++VRDGRDV SYY +R N ++SF +FLK D YP L W +HV+S+L R N+ IL VKYED+ + + +I+ + GL+ E+ I A+AKS F +MR E+ G R + +E D R+G+ G W + F T K + T+ +LGY W
Sbjct: 31 DVFLVSYPKSGNTWVRFLIANLI----KKDPEDI----VDFHSVQKIVPEVI-----RNNEFIDKLERPRVIKSHGIYT---------------------------EYPKVIYLVRDGRDVYVSYYFYRL---NRLGEEISFFDFLKRQDHYPCL-WRNHVESWL-FRKNNRSKILLVKYEDILLDCRQVLNKIINFIGLEVTEEQISSAIAKSKFDNMRNLEKQRG-RPYKQEEKGPDI---FMRQGKQGNWHDFFGTE-EKIFFKSREGSTLIKLGYEKDRNW 265
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: UPI0018E833EC (sulfotransferase domain-containing protein n=1 Tax=Leptolyngbya sp. BL0902 TaxID=1115757 RepID=UPI0018E833EC) HSP 1 Score: 115 bits (287), Expect = 7.540e-25 Identity = 86/282 (30.50%), Postives = 141/282 (50.00%), Query Frame = 1
Query: 163 DIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHF---RQGLRNLEPPDMSFEEFLKADLYPGLGWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMTRKGQAGGWEECFTTPVSKDIWNELAFQT-MRELGYVSS 996
DIF+VSYPKSGN W+RF++A+ L + AT+ I F++I+ +PD+ Y + + R KSH+ ++ +++++VRD RDV+ SYYH+ R+ L P D ++FL + W DHV +L R NS D L ++YEDL + F ++ + GL+ ++ A++R++ SSFK MR+ E+ TG + +D R+G++GGW E +S + + FQ+ M E GY+ +
Sbjct: 32 DIFLVSYPKSGNTWLRFIVAN--LINSATD--------ISFSNIDLIVPDI-YKVSAAKLRKISRPRILKSHEYL--------------------------DVRYGKVIYIVRDPRDVLLSYYHYKILRKKLSESHPLDDFAQDFLHGKIDKFGTWQDHVGGWLGARKNSQ-DFLLLRYEDLIKEPFLETKKVANFIGLNASDDAVQRSLELSSFKKMRELEKTTGSNSAALRGSRKD--MFFVREGRSGGWVESLPDVISAKVIEK--FQSGMVEAGYLEA 271
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Match: A0A3M8FQY3_9BACT (Sulfotransferase domain-containing protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A3M8FQY3_9BACT) HSP 1 Score: 115 bits (287), Expect = 7.870e-25 Identity = 90/312 (28.85%), Postives = 146/312 (46.79%), Query Frame = 1
Query: 112 RFYNDRRVAE-RELPRE-----GDIFVVSYPKSGNFWVRFLLAHTWLYSGATESEAVWHREIDFNSIEDTIPDLEYGPNRRDYYLHDKLRAFKSHQPFVPAAVPGKCAATVGRMDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEEFLKADLYPGL----GWADHVKSYLDLRGNSTYDILTVKYEDLQTKQFETMTEIVRWAGLDHNEKAIRRAMAKSSFKSMRKKEEATGLRIFDEEYTDRDRRWRMT----------RKGQAGGWEECFTTPVSKDIWNELAFQTMRELGY 987
RF+ RVA+ + R+ DIF+VSYPKSGN W RFL+A+ +E ++ F +IE +P++ + R L + R FKSH P+ P++RR + +VRD RDV SY+ + + +R L+P D F+E+++ + + W ++V S+L R N T V+YEDL T + + + G++ ++ + RA+ +SS MR E++ + W+MT R G++GGW+E + +IW+ TM ELGY
Sbjct: 13 RFWQMMRVAQGHKFSRQHTFYDDDIFLVSYPKSGNTWTRFLVANL-----MNPNE-----DVSFTNIERLVPEIYLNYDARLLGL-PRPRVFKSHDPY--------------------------DPRYRRAVCIVRDPRDVAVSYFTYAKKIRKLDP-DTGFDEYMERFMVGTIDAFGSWGENVGSWLGARRN-TDGFFVVRYEDLLTDGITQLVRLASFLGIEATDELVTRAIEQSSIDRMRSLEKS------------QQSEWKMTKHSDTSVSFFRSGRSGGWKEDIPEKWADEIWSAWG-DTMEELGY 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13197.2297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13197.2297.1 >prot_H-elongata_contig13197.2297.1 ID=prot_H-elongata_contig13197.2297.1|Name=mRNA_H-elongata_contig13197.2297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp MDDYQCACPNCPPKWRRILHMVRDGRDVMCSYYHFRQGLRNLEPPDMSFEback to top mRNA from alignment at H-elongata_contig13197:3436..6198- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13197.2297.1 ID=mRNA_H-elongata_contig13197.2297.1|Name=mRNA_H-elongata_contig13197.2297.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2763bp|location=Sequence derived from alignment at H-elongata_contig13197:3436..6198- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13197:3436..6198- >mRNA_H-elongata_contig13197.2297.1 ID=mRNA_H-elongata_contig13197.2297.1|Name=mRNA_H-elongata_contig13197.2297.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig13197:3436..6198- (Himanthalia elongata Himel1 dioecious)back to top |