mRNA_H-elongata_contig13103.2243.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13103.2243.1
Unique NamemRNA_H-elongata_contig13103.2243.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig13103.2243.1 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 7.120e-144
Identity = 275/466 (59.01%), Postives = 336/466 (72.10%), Query Frame = 1 
Query:    1 MKRGASDGGGGVSPGHPAKLQKTTSEQGKSSDGDNNGRDDSSLLQQRNYELAVDMRRRKRQEAELEKKLAQAWSRQGHFDATLSAVNRAWDQQVLSDLRAAAAELGLGPRPLSANV--------------NQEEGE-LEITCSDACAVATEAGTPTSELSIMEKLLLPTAEVLAMDATDSSCADQLLKDMGKNLPDAGEERP--RDLLGCMAGTSGAFCDLDSDGYGLESREGVESEGATEISEIEQRLQEKARFTAELAGRLFQALQAHLMSLPPEARRQTLDRTHAELVAEKRKLETERAFLSDQLTMARIRCIELSESLTSLREDHRKVNRTLDKLAVDGV--ELPCDNNLASASVGRWGNSVAGRAHASKGGXXXXXXGHASSFKREGEGTMPDREGLMAALEEAQTLSEARQKEIERCRGDKAEAERQLTEIKATTLLDTKKVDLSGHPQVQRVRHYIEAD 1341
            MKRG SD G   SPG P+KLQKT+S     SDGDN G D  S+LQQ+N+ELAVDMRRRKRQEAELEKKL QAW+RQGHFDATLS+VNRAW +QVLSDL  AA ELGLGPRPL+  V                EEGE + ++  D  +V  E   P SELSIM+KL++P +EVLAMDAT+ SC D+LLK MGK  P+  EE    R+ L  MAGTS AF DLD+DGYGL+SRE V++E AT+I+E+++ L+EKARFT ELAGRLFQALQAHLM+LPPE+R+ TLD+   E+V +K++LE ER FLSD+LT AR RC+ELSES+TSLRE+ RK NRTLDKLA DGV  E+P +    S + GR G++  G A      X     G  + +KR G     D E L+AALEEAQTL+E R KE+ER R +K EAER+LT+ KA+T L+TKK DLSGHPQ QR+   +EA+
Sbjct:    1 MKRGVSDTGAATSPG-PSKLQKTSS----GSDGDNGGPDAKSILQQQNHELAVDMRRRKRQEAELEKKLTQAWARQGHFDATLSSVNRAW-RQVLSDLSTAAGELGLGPRPLNVTVAPGGDXXXXXXXXXXXEEGEVIMVSVKDGLSVPVEGQEPASELSIMQKLIMPASEVLAMDATEFSCGDRLLKGMGKK-PEKSEEAASSRERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAATDIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKDTLDKAQLEMVGKKKRLEAERDFLSDELTQARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGT-SGTGGRRGSAEGGAAXXXXXXXSTYSVG--TGYKR-GVNGAGDVEDLLAALEEAQTLAETRLKEMERWRTEKTEAERELTQFKASTELETKKADLSGHPQFQRLSTQLEAE 455
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BLAST of mRNA_H-elongata_contig13103.2243.1 vs. uniprot
Match: A0A6H5KZC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC3_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.460e-87
Identity = 175/321 (54.52%), Postives = 211/321 (65.73%), Query Frame = 1 
Query:   97 GDNNGRDDSSLLQQRNYELAVDMRRRKRQEAELEKKLAQAWSRQGHFDATLSAVNRAWDQQVLSDLRAAAAELGLGPRPLSANV---------------NQEEGE------------------------------LEITCSDACA--------------VATEAGTPTSELSIMEKLLLPTAEVLAMDATDSSCADQLLKDMGKNLPDAGEERP--RDLLGCMAGTSGAFCDLDSDGYGLESREGVESEGATEISEIEQRLQEKARFTAELAGRLFQALQAHLMSLPPEARRQTLDRTHAELVAEKRKLETERAFLSDQLT 876
            GDN G D  S+L+Q+N+ELAVDMRRRKRQEAELEKKLAQAW+RQGHFDATLSAVNRAW +QVLSDL  AA ELGLGPRPL+ +V                 EEGE                              ++   SDA                V  E   P SELSIM+KL++P AE+LAMDAT+ SC D+LLK MGK  P+  EE    R+ L  MAGTS AF DLD+DGYGL+SRE V++E A +I+E+++ L+EKARFT ELAGRLFQALQAHLM+LPPE+RR TLD+   E+V +K++LE ER FLSD+LT
Sbjct:   11 GDNGGPDAKSILRQQNHELAVDMRRRKRQEAELEKKLAQAWARQGHFDATLSAVNRAW-RQVLSDLSTAAGELGLGPRPLNVSVAPGGDXXXXXXXXXXXXEEGEVIMVSVKDGLSGETFLLFFSQSDTPHSHYIMDANTSDALRPSSHRVLLPTQWTPVPVEGREPASELSIMQKLIMPAAEILAMDATEFSCGDRLLKGMGKK-PEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRRDTLDKAQLEMVGKKKRLEAERDFLSDELT 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13103.2243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7U9_ECTSI7.120e-14459.01E3 ubiquitin protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KZC3_9PHAE1.460e-8754.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13103contigH-elongata_contig13103:442..6542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.5
Seed ortholog evalue5.6e-125
Seed eggNOG ortholog2880.D7G7U9
KEGG koko:K10696
GOsGO:0000075,GO:0000077,GO:0000151,GO:0000152,GO:0000209,GO:0000228,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0000930,GO:0000931,GO:0001067,GO:0001817,GO:0001819,GO:0003674,GO:0003676,GO:0003677,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005815,GO:0005856,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006342,GO:0006355,GO:0006357,GO:0006359,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006978,GO:0006996,GO:0007059,GO:0007154,GO:0007165,GO:0007275,GO:0007549,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008274,GO:0008630,GO:0009048,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010212,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010565,GO:0010574,GO:0010575,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010826,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016579,GO:0016740,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030330,GO:0030518,GO:0030521,GO:0030522,GO:0031056,GO:0031057,GO:0031058,GO:0031060,GO:0031061,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031371,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031436,GO:0031497,GO:0031570,GO:0031572,GO:0031618,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032870,GO:0032886,GO:0032991,GO:0033043,GO:0033044,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033503,GO:0033523,GO:0033554,GO:0033993,GO:0034097,GO:0034612,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035065,GO:0035066,GO:0035067,GO:0035257,GO:0035258,GO:0035556,GO:0035690,GO:0036211,GO:0040029,GO:0042127,GO:0042221,GO:0042304,GO:0042493,GO:0042770,GO:0042772,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043412,GO:0043627,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044454,GO:0044464,GO:0045717,GO:0045739,GO:0045765,GO:0045766,GO:0045786,GO:0045787,GO:0045814,GO:0045833,GO:0045892,GO:0045893,GO:0045922,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046599,GO:0046600,GO:0046605,GO:0046606,GO:0046872,GO:0046890,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050681,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051055,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051427,GO:0051493,GO:0051494,GO:0051569,GO:0051570,GO:0051571,GO:0051573,GO:0051716,GO:0051726,GO:0051865,GO:0060255,GO:0060548,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070063,GO:0070316,GO:0070317,GO:0070507,GO:0070510,GO:0070512,GO:0070531,GO:0070646,GO:0070647,GO:0070887,GO:0071103,GO:0071156,GO:0071158,GO:0071310,GO:0071345,GO:0071356,GO:0071383,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071680,GO:0071681,GO:0071704,GO:0071824,GO:0071840,GO:0071894,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072422,GO:0072425,GO:0080090,GO:0080134,GO:0080135,GO:0085020,GO:0090068,GO:0090239,GO:0090240,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097327,GO:0098687,GO:0099086,GO:0140096,GO:0140110,GO:1901342,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901983,GO:1901984,GO:1901985,GO:1901987,GO:1901988,GO:1902041,GO:1902042,GO:1902115,GO:1902116,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1902749,GO:1902750,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903508,GO:1904018,GO:1905268,GO:1905269,GO:1990234,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000377,GO:2000378,GO:2000615,GO:2000617,GO:2000618,GO:2000620,GO:2000756,GO:2000757,GO:2000758,GO:2001020,GO:2001022,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001251,GO:2001252
EggNOG free text desc.histone monoubiquitination
EggNOG OGsKOG0978@1,KOG0978@2759
Ec32 orthologEc-06_000230.2
EC2.3.2.27
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-06_000230.1
Exons10
Model size1341
Cds size1341
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13103.2243.1prot_H-elongata_contig13103.2243.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13103 442..6542 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929778.2602947-CDS-H-elongata_contig13103:441..5921622929778.2602947-CDS-H-elongata_contig13103:441..592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 442..592 -
1691679154.0990467-CDS-H-elongata_contig13103:441..5921691679154.0990467-CDS-H-elongata_contig13103:441..592Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 442..592 -
1622929778.277039-CDS-H-elongata_contig13103:926..9841622929778.277039-CDS-H-elongata_contig13103:926..984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 927..984 -
1691679154.1092637-CDS-H-elongata_contig13103:926..9841691679154.1092637-CDS-H-elongata_contig13103:926..984Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 927..984 -
1622929778.2919936-CDS-H-elongata_contig13103:1534..16411622929778.2919936-CDS-H-elongata_contig13103:1534..1641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 1535..1641 -
1691679154.117021-CDS-H-elongata_contig13103:1534..16411691679154.117021-CDS-H-elongata_contig13103:1534..1641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 1535..1641 -
1622929778.3118656-CDS-H-elongata_contig13103:2011..21571622929778.3118656-CDS-H-elongata_contig13103:2011..2157Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 2012..2157 -
1691679154.1275072-CDS-H-elongata_contig13103:2011..21571691679154.1275072-CDS-H-elongata_contig13103:2011..2157Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 2012..2157 -
1622929778.3339202-CDS-H-elongata_contig13103:2787..31321622929778.3339202-CDS-H-elongata_contig13103:2787..3132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 2788..3132 -
1691679154.13597-CDS-H-elongata_contig13103:2787..31321691679154.13597-CDS-H-elongata_contig13103:2787..3132Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 2788..3132 -
1622929778.3495412-CDS-H-elongata_contig13103:3857..39971622929778.3495412-CDS-H-elongata_contig13103:3857..3997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 3858..3997 -
1691679154.1442058-CDS-H-elongata_contig13103:3857..39971691679154.1442058-CDS-H-elongata_contig13103:3857..3997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 3858..3997 -
1622929778.363079-CDS-H-elongata_contig13103:4182..41981622929778.363079-CDS-H-elongata_contig13103:4182..4198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 4183..4198 -
1691679154.152628-CDS-H-elongata_contig13103:4182..41981691679154.152628-CDS-H-elongata_contig13103:4182..4198Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 4183..4198 -
1622929778.375726-CDS-H-elongata_contig13103:4677..47791622929778.375726-CDS-H-elongata_contig13103:4677..4779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 4678..4779 -
1691679154.1605608-CDS-H-elongata_contig13103:4677..47791691679154.1605608-CDS-H-elongata_contig13103:4677..4779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 4678..4779 -
1622929778.3864284-CDS-H-elongata_contig13103:5606..57861622929778.3864284-CDS-H-elongata_contig13103:5606..5786Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 5607..5786 -
1691679154.1798513-CDS-H-elongata_contig13103:5606..57861691679154.1798513-CDS-H-elongata_contig13103:5606..5786Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 5607..5786 -
1622929778.3993003-CDS-H-elongata_contig13103:6446..65421622929778.3993003-CDS-H-elongata_contig13103:6446..6542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 6447..6542 -
1691679154.1896496-CDS-H-elongata_contig13103:6446..65421691679154.1896496-CDS-H-elongata_contig13103:6446..6542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13103 6447..6542 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13103.2243.1

>prot_H-elongata_contig13103.2243.1 ID=prot_H-elongata_contig13103.2243.1|Name=mRNA_H-elongata_contig13103.2243.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=447bp
MKRGASDGGGGVSPGHPAKLQKTTSEQGKSSDGDNNGRDDSSLLQQRNYE
LAVDMRRRKRQEAELEKKLAQAWSRQGHFDATLSAVNRAWDQQVLSDLRA
AAAELGLGPRPLSANVNQEEGELEITCSDACAVATEAGTPTSELSIMEKL
LLPTAEVLAMDATDSSCADQLLKDMGKNLPDAGEERPRDLLGCMAGTSGA
FCDLDSDGYGLESREGVESEGATEISEIEQRLQEKARFTAELAGRLFQAL
QAHLMSLPPEARRQTLDRTHAELVAEKRKLETERAFLSDQLTMARIRCIE
LSESLTSLREDHRKVNRTLDKLAVDGVELPCDNNLASASVGRWGNSVAGR
AHASKGGSSKGGSGHASSFKREGEGTMPDREGLMAALEEAQTLSEARQKE
IERCRGDKAEAERQLTEIKATTLLDTKKVDLSGHPQVQRVRHYIEAD
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mRNA from alignment at H-elongata_contig13103:442..6542-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13103.2243.1 ID=mRNA_H-elongata_contig13103.2243.1|Name=mRNA_H-elongata_contig13103.2243.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6101bp|location=Sequence derived from alignment at H-elongata_contig13103:442..6542- (Himanthalia elongata Himel1 dioecious)
ATGAAACGGGGCGCGTCCGATGGGGGCGGCGGGGTTTCGCCGGGACATCC
CGCAAAGCTGCAGAAGACGACGTCCGAACAGGGAAAGAGCTCAGATGTAA
GTGCGACTTTTCTTTACGACGATGTTGACGCGCAGCTGATGCTTCGTGTG
CTCGCGCCGTTGCCAGGAAATCCAGGGTCATATGATCGCAGAGGCGTGTT
GCCAATTGCCAAGCGACTGTACATGTGTATAGTCAGTCGTCTTTAAAAAA
GATCTTCGACCAAAAACAGTCCACACACGATGAATAAATGGAATCATGAA
TCATGATGGGATATCATCCCCGACATGATCATGATACCGTCGACCCGATG
AATTTACTATCGGGAAACATGATTAATCGCATATGACGATTTTGTACTCA
AAGGAAGCATTGTACACATTCGAATCTGACGATAGTTGTTCCCCTGGACT
GCACCTCTGATGGTGCTGAGAAGGCGTAGATATTCGGAGGGTTGAAATTA
GTTCATACGTTTTTTTAGAAGAATTTTGGAGATCCATCCTTTTTTTTCGC
ACTCCTTGAAGAGAGCTACAGTAGCGGCTTAAGCAGTTTGAAAATAATGC
CATAATCGTGTCGCAACCCTAACCCTAACCCTAACCCCGCAAGTACAAAC
AAATGCGTTCTCTTTTTGGGTCCCCCTGTCTGTCCCCCCTCTCTCCCTTG
TCGGTGGTGCCGATGCCGGTGGTGCCGGTGCCGGTGTCGGTGGTGCCTTT
TGAAAGGGCGATAATAACGGGCGAGACGACAGTTCCCTCCTGCAGCAGCG
CAACTACGAGCTGGCGGTAGACATGCGCCGTCGGAAGCGACAGGAGGCCG
AGTTAGAGAAGAAGCTGGCTCAGGCTTGGAGCAGGCAAGGGCACTTCGAC
GCCACCCTGTCCGCGGTCAATCGCGCTTGGGACCAGGTATTGCGCCACGT
TAGGGTTAGGGTTAGGGTAGGTACAAGTGAGAAAAGCCCCCTTCGTGTTG
AGTGCCGTACTAAAAAACGATCAATTCAACCTTAAGAGCTGCAAACCAAG
CCATGCGAGTTTCTTTCTCAACGGGTGCGCAAGTAGCCGCAGCGAGTGAA
AAAACAGCCATCGACCCCACACCCCCTGACTCTTTTGTTCGGCGCTACTC
TGATGCGTAATGCGTAATCCTGAGCTCCGCAAGCGAAGGAGTTCCATCCG
TTCGCCATCGACTCCGTGCTGATTTCGAACATGTCTAGAGTAATCTTGAA
AGTATTGCATGATCACTCTTAACGTTCTTATCGTTCTCTTTGACAATTCT
CTTCTCTTCGGTTTCGCCCTCCAAATCGGTATACGGTTCGGTATTCGATT
CGGTATCATGGTGTTGATACCTTGATACTTTAGGTTGGAGTTATATCTCG
GGGGTTTAATTCAAACTTGTTTTGCCTCGTTCTTCCCTCCCACGTTATAC
CCTTATCGGGGCATACCACCAACAATCAACAATCAACCAATGCGATGAAA
AGTAAAAAACCCAGCACATTAGATGTTTGAGCCCAGAGGAGTAACGGATG
CACTTTAGTATTCTAGTATTCTAGTATCGTAGTGTAATGTAATGCAGAGT
GCAAGCTACGGTAGATGTAGAAGGTGAATGTCAGGGACATAGTGGTGTCG
AGATAGACGGGCAGACAGGCAACTCCTTGAGATGCTCCGTCCATAGACAT
CGTGTGTAGTGCCGCTTGAAGCAGTCGTGCTATCCGCTGGCACTCCGAAA
AAAACCTATTGAGCAGGTGCTGTCTGATCTGAGGGCTGCGGCGGCCGAAC
TAGGATTGGGTCCTCGTCCTCTGAGTGCCAACGTGAACCAGGAAGAAGGG
GAGCTGGAAATCACCGTTAAGGATGGACTTGCAGGCGAGATATAATACTA
TAATACTATGATACTTTAATACTTTAATATTACTAATACTATAATATACA
GTACTATTATAATAATAGTTTATAATGTATCACAGAAATAACATTACATA
CCATACCGAGTGGCGAAGCTGTGCGAACTTCGTTTTTGTGGTGCTACCGC
CCTTTTGGCGTTTTCGTCCTTCCTTTTGCCGTTTTTATCTTTCCTTTTGC
TGTTTTTGCCGTTTTGTCCTTCCTATGGCGTTGCTGCGGTATAATACCAC
CACCGTTGGACCGTTGAGTGGTCTGAATAAAAAGCATTCGCATTCGGTTT
CAGCGATAAAGAAGTGCTCCACACAAAATCAAGCAGTCATTTGGAAATGT
TGAGCTTGATGTGGAAATTTTGAATTTTGTATGGATCTTCGGGTCAATAG
AAAAAGTATAGTGTGGAGAAATAGTATAGTGTAGTGTAGTGTAGTGTAGT
GACGCATGTGGTGTTAGAATGGCAACATGCAGAGGCTTTGACGAGAGGGC
ACTACTCTAGCATTGCAGCTTGAAGTGGTTATACCGTTCCACTGGCATCA
GTGGGTTCTTTTTTTTTTTTTGAACCTCGTGCGTCACCTATTTTCAAAAA
TATATTTTCTGGCTGAAACTTGAGTCATGACCGCAAACTTGAGAGCAGTG
GCAACTGAAGCCGGCACGCCAACGTCGGAGCTGTCGATCATGGAAAAGCT
GCTCCTGCCGACGGCGGAGGTCCTCGCGATGGATGCCACGGACTCGTCGT
GTGCGGATCAGCTGCTCAAGGACATGGGCAAGAACGTGAGGCCACAGAAT
GCAGATACTCTATTCTATTTTATCACTATGTATCACCCGCCCCCCTCCTT
CTCGGAGTCAATCGATTTGCCATGGGTCGATTTGTCGAGGAGGCGGACCA
ATCACAGAATGCCCAACAGTAGGTGCTCGGCGGACCAATCTATCGTAAGG
GAGCGAAATGTTATTCTAGTGTTATTCTAGTGGTAGTGCGACATGCCTCT
GAGACGTTGGGTACCTTTGAAATTCTCACATAGCGATTAACGGCAGCAAC
GGTGTCAATGTCCCATCTGGAATATGGTAATGGTAATGTTGCCATGAATA
TGGTAATGTTGCCATGAATATGGTAAAATGTCATGTTTTTGTATTAAGAG
TCGCGTCGTACGGAATGGCGATGGTCCGAATAGTTAAAATGGAAACGTTG
AATGGCGTGGAAAGGGCAATCCGTTTGTAAATGTCTTGATTTACGCTTAA
TGTCGAAGTATTGTAAGGTTACCCTGGCTGCGATTGGATCGTCGGACAAT
CCTTCGCCCTTAGTGTGACTTGACCACGCTCCTCACTTTCACATACATCT
AAAACAATAATTCCTTCTTTCCTTCACTTGGACCTCCTACTCCGACATTT
CTTTATATCTACCCTCCGGTATGGTACATCCTTCATTACGAGAGGAAATC
CCCTGGCGACCGTCCGTCTTTTCGTCCTTTTTTTTGTACGAACCTCGCCG
TCCCCTGCAGCTACCCGACGCGGGTGAAGAAAGACCCCGAGATCTCTTAG
GGTGTATGGCAGGGACGAGCGGCGCTTTCTGTGACCTGGACTCGGACGGG
TACGGTCTCGAGAGCCGAGAGGGTGTAGAGTCGGAGGGGGCCACCGAGAT
CTCGGAAATAGAGCAGAGGCTGCAGGAGAAAGCCCGCTTCACGGCTGAGC
TGGCGGGTCGTCTCTTCCAGGCCCTTCAAGCGCACCTGATGTCACTCCCC
CCCGAGGCCCGAAGGCAGACGCTTGACAGGACACACGCCGAGTTGGTGGC
GGAGAAGAGAAAGCTAGAGACGGAAAGGGCGTTCTTGAGCGACCAGCTGA
CGATGGTAAGGGATGAGGAAGAAAAACGAGAGTAGATGAGAGTAGTGGAC
GACCCGCACTAGTATGAAATAGGTCGTTATCGTTATCGTTAGGATTATCG
TTATCGTTATTTTACCTAATCCCATAGGATGGAGGCTAGGGTTAGGGTTG
GGGTTACCGACAGAGTCAGTCGAAGGTTAGTGATTCTTCACCCTAAATGA
AAGCCGTTGTTATTTCCAAAATGAAGACGACTGGCCACTCGACACCGCTT
GCGAATGAATCTCGACATTCATGATCATGGACGTGTTTGTGATTGGGCCG
AGGTATACTTGTGCCTTTGATTGGGTGCCATGACACTTTAATAATGTGCC
GTCGTTTCCGGCGGCTGCCTCTGCGGTTCTTGATGAGCGTGATCAGGAGC
AATATAGCGCGGCTTATCTAGCTCTTCGCACATCCTTTGACGTCTTGAGC
AGTCCCGTACGTATCGCCACGGACCGCTACCTCCAGTAGCGATGCCATCC
CATCCCATCCCATCCCATACCATCCCGTAGTGGTGTTCCTTTAGTGGTTT
CATCCCGTCCTGGAACGTTCTTTTTCAACCACCCGTTTCTCTGTAATCGT
GATATAATCGTGATATCAACTCTCTCGGAGAACAGGCGAGGATCCGCTGT
ATTGAGCTCTCCGAGTCCTTAACAAGTCTCCGTGAAGACCACCGCAAGGT
CAATCGTACCCTGGACAAGCTCGCCGTGGACGGTGTTGAACTCCCCTGCG
ACAACAACCTAGCCTCTGCTTCGGTTGGAAGGTAAGACGACAGGAAAAGC
ACATCAGCAAGAGCATCGGATTTCGATTTCAAAACGAGGTGTGCAGAAGT
TGATGAAGGTGATGCGTGCTTCTGGTGATGGTGTGTCTCAGATCTAGCTG
AGCCCAATCGTAATGTGGGCCGGTGACCGACCCCGCAAGCCTTGTTTTGT
TGTGTTGCTGTTTTTCTTATCTAGATCGAAACAAACACTCTCACGATTAG
CAAATATAACTGGACTAACAAAACCTTACTAAATCCTCGAGTGGGTCGGC
AAGCGGCACTGTCGGTTGATCTCGCGCCGAGCACGTGAATGAAAATTTTG
CGTCATGTGATATGACCATGGCCCAACATGGACCAACATGCCTGCTGCCA
GATGGGGCAACTCTGTGGCGGGGAGAGCACATGCTTCAAAGGGAGGATCT
TCAAAGGGAGGATCGGGACACGCCTCTAGCTTCAAAAGAGAGGGTGAGGG
AACAATGCGTCACGCCCATCGATTGATGTCAAAACCCTAGCCCAAAAGAC
AAGATGCGTTTGTGAGATGCGTGCTCTGGGAGTTTTCACAAGAAAGTCGG
TAGCTGTTTGACTTTTGAAGTTACGGCTTGAGACGATCTTGAGACGGTTT
GTGGGCGGTTTTGTGGATTGCGATCACGAAATACTAATTGCAGCAAGCAA
CAGTCCTTAACGTTTGCTGGTCTGAGTTAGGGTTAGGGTTAGGGTTAGGG
TGCCATCCGCCACCTAACGCCACCTAACCCTAACCCTAAGAGTTATAGTA
TTATGATTAGTAGTATATCATAAGTATCGCAAGGGTGCAAGGGTGCAAGC
GTGATTATTACGCAATGGTGCTGATTATACTATGTGTTGATTATACTATG
TGCAGTATACTGCCGTCGTATTGTGTGGTGTTTGCAAACACTGTTTTTGT
GTCATTATTACTTTATTACAGTACATTAATACTTCGGTATGAAAATATTA
CTGGTATTAACTACACATTGTGCGTTCGGGGCTCGAAACGGGGGGGGCTG
CTGGCCAGCAGATCGAGAGGGTCTCATGGCTGCGCTGGAAGAGGCCCAGA
CACTCTCTGAAGCCAGGTGAGAGCTACAAGCGTCCGCTTGGGAACCGTCA
AGAGTGTAGTTTTTGACTCGCTGTTCAATTGCTGTGTATGAGCGATCGAG
ACGGATTTCGTCCTGGGGTGATACCAACTCATCTCATCGAAATCTCATCG
AATGCCATCATCCACAGAGGGAGTGTTTTGGGGCAGTCGCTTGTTAAAGT
GGGGGCTCAAACTGGCGGTAACTGGCGGTTGGACAACAAGCTTAGGAGGA
GGGGGGGGCGTTCGCCACGATGACGATGACGTTGCGTTTCGTGTAACTGT
GTACGGCATAGCAAGGCTTGAATTGACTCGGATGGCGTTGGGTGGATCAG
GCAAAAGGAGATCGAGAGGTGTCGCGGAGATAAGGCGGAGGCAGAGAGGC
AGCTAACGGAGATTAAAGCAACAACGCTGCTAGACACGAAAAAGGTGGAC
CTGTCTGGACATCCGCAGGTTCAGCGGGTGAGACACTACATTGAGGCAGA
C
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Coding sequence (CDS) from alignment at H-elongata_contig13103:442..6542-

>mRNA_H-elongata_contig13103.2243.1 ID=mRNA_H-elongata_contig13103.2243.1|Name=mRNA_H-elongata_contig13103.2243.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2682bp|location=Sequence derived from alignment at H-elongata_contig13103:442..6542- (Himanthalia elongata Himel1 dioecious)
ATGAAACGGGGCGCGTCCGATGGGGGCGGCGGGGTTTCGCCGGGACATCC
CGCAAAGCTGCAGAAGACGACGTCCGAACAGGGAAAGAGCTCAGATATGA
AACGGGGCGCGTCCGATGGGGGCGGCGGGGTTTCGCCGGGACATCCCGCA
AAGCTGCAGAAGACGACGTCCGAACAGGGAAAGAGCTCAGATGGCGATAA
TAACGGGCGAGACGACAGTTCCCTCCTGCAGCAGCGCAACTACGAGCTGG
CGGTAGACATGCGCCGTCGGAAGCGACAGGAGGCCGAGTTAGAGAAGAAG
CTGGCTCAGGCTTGGAGCAGGCAAGGGCACTTCGACGCCACCCTGTCCGC
GGTCAATCGCGCTTGGGACCAGGGCGATAATAACGGGCGAGACGACAGTT
CCCTCCTGCAGCAGCGCAACTACGAGCTGGCGGTAGACATGCGCCGTCGG
AAGCGACAGGAGGCCGAGTTAGAGAAGAAGCTGGCTCAGGCTTGGAGCAG
GCAAGGGCACTTCGACGCCACCCTGTCCGCGGTCAATCGCGCTTGGGACC
AGCAGGTGCTGTCTGATCTGAGGGCTGCGGCGGCCGAACTAGGATTGGGT
CCTCGTCCTCTGAGTGCCAACGTGAACCAGGAAGAAGGGGAGCTGGAAAT
CACCCAGGTGCTGTCTGATCTGAGGGCTGCGGCGGCCGAACTAGGATTGG
GTCCTCGTCCTCTGAGTGCCAACGTGAACCAGGAAGAAGGGGAGCTGGAA
ATCACCTGTAGTGACGCATGTGTGTAGTGACGCATGTGCAGTGGCAACTG
AAGCCGGCACGCCAACGTCGGAGCTGTCGATCATGGAAAAGCTGCTCCTG
CCGACGGCGGAGGTCCTCGCGATGGATGCCACGGACTCGTCGTGTGCGGA
TCAGCTGCTCAAGGACATGGGCAAGAACCAGTGGCAACTGAAGCCGGCAC
GCCAACGTCGGAGCTGTCGATCATGGAAAAGCTGCTCCTGCCGACGGCGG
AGGTCCTCGCGATGGATGCCACGGACTCGTCGTGTGCGGATCAGCTGCTC
AAGGACATGGGCAAGAACCTACCCGACGCGGGTGAAGAAAGACCCCGAGA
TCTCTTAGGGTGTATGGCAGGGACGAGCGGCGCTTTCTGTGACCTGGACT
CGGACGGGTACGGTCTCGAGAGCCGAGAGGGTGTAGAGTCGGAGGGGGCC
ACCGAGATCTCGGAAATAGAGCAGAGGCTGCAGGAGAAAGCCCGCTTCAC
GGCTGAGCTGGCGGGTCGTCTCTTCCAGGCCCTTCAAGCGCACCTGATGT
CACTCCCCCCCGAGGCCCGAAGGCAGACGCTTGACAGGACACACGCCGAG
TTGGTGGCGGAGAAGAGAAAGCTAGAGACGGAAAGGGCGTTCTTGAGCGA
CCAGCTGACGATGCTACCCGACGCGGGTGAAGAAAGACCCCGAGATCTCT
TAGGGTGTATGGCAGGGACGAGCGGCGCTTTCTGTGACCTGGACTCGGAC
GGGTACGGTCTCGAGAGCCGAGAGGGTGTAGAGTCGGAGGGGGCCACCGA
GATCTCGGAAATAGAGCAGAGGCTGCAGGAGAAAGCCCGCTTCACGGCTG
AGCTGGCGGGTCGTCTCTTCCAGGCCCTTCAAGCGCACCTGATGTCACTC
CCCCCCGAGGCCCGAAGGCAGACGCTTGACAGGACACACGCCGAGTTGGT
GGCGGAGAAGAGAAAGCTAGAGACGGAAAGGGCGTTCTTGAGCGACCAGC
TGACGATGGCGAGGATCCGCTGTATTGAGCTCTCCGAGTCCTTAACAAGT
CTCCGTGAAGACCACCGCAAGGTCAATCGTACCCTGGACAAGCTCGCCGT
GGACGGTGTTGAACTCCCCTGCGACAACAACCTAGCCTCTGCTTCGGTTG
GAAGGCGAGGATCCGCTGTATTGAGCTCTCCGAGTCCTTAACAAGTCTCC
GTGAAGACCACCGCAAGGTCAATCGTACCCTGGACAAGCTCGCCGTGGAC
GGTGTTGAACTCCCCTGCGACAACAACCTAGCCTCTGCTTCGGTTGGAAG
ATGGGGCAACTCTGTGGCGGGGAGAGCACATGCTTCAAAGGGAGGATCTT
CAAAGGGAGGATCGGGACACGCCTCTAGCTTCAAAAGAGAGGGTGAGGGA
ACAATGCATGGGGCAACTCTGTGGCGGGGAGAGCACATGCTTCAAAGGGA
GGATCTTCAAAGGGAGGATCGGGACACGCCTCTAGCTTCAAAAGAGAGGG
TGAGGGAACAATGCCAGATCGAGAGGGTCTCATGGCTGCGCTGGAAGAGG
CCCAGACACTCTCTGAAGCCAGCAGATCGAGAGGGTCTCATGGCTGCGCT
GGAAGAGGCCCAGACACTCTCTGAAGCCAGGCAAAAGGAGATCGAGAGGT
GTCGCGGAGATAAGGCGGAGGCAGAGAGGCAGCTAACGGAGATTAAAGCA
ACAACGCTGCTAGACACGAAAAAGGTGGACCTGTCTGGACATCCGCAGGT
TCAGCGGGTGAGACACTACATTGAGGCAGACGCAAAAGGAGATCGAGAGG
TGTCGCGGAGATAAGGCGGAGGCAGAGAGGCAGCTAACGGAGATTAAAGC
AACAACGCTGCTAGACACGAAAAAGGTGGACCTGTCTGGACATCCGCAGG
TTCAGCGGGTGAGACACTACATTGAGGCAGAC
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