mRNA_H-elongata_contig130804.2229.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A6H5JNU2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNU2_9PHAE) HSP 1 Score: 193 bits (491), Expect = 9.610e-55 Identity = 97/125 (77.60%), Postives = 108/125 (86.40%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QVSYHTRNLLCVL+LH+GPILSL V E A+T S DK+LR+WPLDFSDFLMEAAHES V S C S DGLKLA+GTA GSI VLDVMTHGY TALRSH+ GVTAAAIDP +ER++FAT SEDCT+R
Sbjct: 903 QVSYHTRNLLCVLQLHNGPILSLEVNEDHAITGSEDKVLRMWPLDFSDFLMEAAHESPVVSVCFSKDGLKLAVGTAAGSISVLDVMTHGYTTALRSHRGGVTAAAIDPSEERDDFATVSEDCTIR 1027
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A835YLQ5_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLQ5_9STRA) HSP 1 Score: 139 bits (350), Expect = 9.510e-36 Identity = 75/125 (60.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QV Y +R LLCVLRLH GPI +L V G A T S D LRLWPLDF+D+LMEA HE+ V + S DGL+LA+GT GS+GVLDV+TH Y+T LRSH+ V A A DPC R E AT D TVR
Sbjct: 735 QVDYESRALLCVLRLHSGPIRALAVHAGFAATASDDGWLRLWPLDFNDYLMEAKHEAPVTAIALSADGLRLAVGTDSGSLGVLDVVTHKYSTLLRSHRGAVAAIACDPC--RGEAATVGADGTVR 857
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: F0Y7G3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7G3_AURAN) HSP 1 Score: 122 bits (306), Expect = 7.850e-30 Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
Q+SY R LLCVLRLHDGPI + T G +T S D +RLWPLDFSD+LMEA HE+ V + DGLK+A GT+ GS+GVLDV HGY+T +RSH V A D FAT +D T+R
Sbjct: 162 QLSYAQRALLCVLRLHDGPIRRVDATPGYVVTASDDCYVRLWPLDFSDYLMEAKHEAPVVDVAVAPDGLKIACGTSRGSLGVLDVSAHGYSTLVRSHVGAVFDVAH--ADVGGRFATCGKDGTIR 284
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: L1JQ90_GUITC (DUF667 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ90_GUITC) HSP 1 Score: 119 bits (299), Expect = 7.080e-29 Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
Q+++ RN+ + RLHD I S+VVT+G +T S D+ LR+WPLDFSD+ +EA H + V + S D L++AIGTA G+IG++DV THGY T +RSH++ V A A+DP EF T + D T+R
Sbjct: 527 QINFTNRNIDQIYRLHDDSINSVVVTDGFCVTGSEDRFLRVWPLDFSDYFLEAEHAAPVNALAVSSDCLRIAIGTANGTIGIMDVPTHGYRTVVRSHESVVLALAMDP--HNREFTTTASDGTIR 649
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A8J4ESL9_9CHLO (DUF667 domain-containing protein n=5 Tax=Volvox TaxID=3066 RepID=A0A8J4ESL9_9CHLO) HSP 1 Score: 117 bits (294), Expect = 3.360e-28 Identity = 62/125 (49.60%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QV Y TRNL C+ +LH I L+V +G A+T D+LLR WPLDF D+L+EA HE AV S D L++AIGT G++G L + H Y T LRSH V A A+DP R+ F T S D T+R
Sbjct: 659 QVDYTTRNLDCIYQLHSAAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGAVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGAVNAVAVDP--NRDHFCTVSTDGTLR 781
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: D8TH40_VOLCA (Bromo domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TH40_VOLCA) HSP 1 Score: 115 bits (289), Expect = 1.600e-27 Identity = 61/125 (48.80%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QV Y TRNL C+ +LH I L+V +G A+T D+LLR WPLDF D+L+EA HE +V S D L++AIGT G++G L + H Y T LRSH V A A+DP R+ F T S D T+R
Sbjct: 1216 QVDYTTRNLDCIYQLHASAINCLLVADGLAITGGDDRLLRAWPLDFKDYLLEAEHEGSVTGLALSPDALRVAIGTETGALGCLHIPDHSYMTLLRSHSGSVNAVAVDP--NRDHFCTVSTDGTLR 1338
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A7S4E3P8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P8_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.900e-27 Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QVSY R+LLCVL+LHDGPI + T G +T + D +RLWP F+DFLMEA H++ V S + DGL++A GT+ G++GVLDV +H Y T +R+H T A +D +FAT D TVR
Sbjct: 502 QVSYAQRSLLCVLKLHDGPIRGVAATPGYVVTAADDGYVRLWPPGFADFLMEAKHDAPVVSISVAPDGLRVACGTSRGALGVLDVASHKYGTLVRAH----TGAILDIACTSGKFATCGADATVR 622
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A0L0D4U4_THETB (WD repeat-containing protein 90 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4U4_THETB) HSP 1 Score: 115 bits (287), Expect = 2.940e-27 Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
Q++Y T L + +LH+GPI SL V +G ++ S D LR+WPLDFSDF +EA HESAV S S D LK+ GTA GS+G LD++T + T LRSH AGV A+ P D+ FAT + D +VR
Sbjct: 606 QIAYSTVELEAIYQLHNGPIRSLSVVDGYCVSGSDDGFLRVWPLDFSDFFLEAEHESAVTSVAISYDCLKILCGTAAGSLGALDILTQSFTTFLRSHTAGVHDLAVSPKDD--SFATVAGDGSVR 728
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A250WPV0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPV0_9CHLO) HSP 1 Score: 115 bits (287), Expect = 2.940e-27 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
+++Y TR LLCV +LH I SLVV + +T S DKLLR+WP+DFSDFLMEA HE++V S + DGL++ IGT G++G+LD+ T Y T LRSH V AID ++ T S D ++R
Sbjct: 499 EINYRTRALLCVYQLHSSAINSLVVHDSFCVTGSDDKLLRVWPMDFSDFLMEADHEASVTSVGVAKDGLRVCIGTESGALGILDIPTQRYRTLLRSHTGTVMGVAID--HNSSQYCTVSTDGSIR 621
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Match: A0A2J8A864_9CHLO (WD repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A864_9CHLO) HSP 1 Score: 114 bits (284), Expect = 7.490e-27 Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 1 QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLMEAAHESAVASACASGDGLKLAIGTAEGSIGVLDVMTHGYATALRSHKAGVTAAAIDPCDEREEFATASEDCTVR 375
QV Y TRNL C+ +LH I L++ +G A+T D+LLR WPLDF D+L+EA HE +V S D L++ +GT G +G L + H Y+T LRSH V A A DP R++F T S D T+R
Sbjct: 655 QVDYTTRNLDCIYQLHSAAITCLLIADGLALTGGEDRLLRAWPLDFRDYLLEAEHEGSVTGLALSPDALRVVVGTENGVLGCLQIPNHSYSTLLRSHCGPVNAVAADP--SRDQFCTVSSDGTLR 777 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130804.2229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig130804.2229.1 >prot_H-elongata_contig130804.2229.1 ID=prot_H-elongata_contig130804.2229.1|Name=mRNA_H-elongata_contig130804.2229.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp QVSYHTRNLLCVLRLHDGPILSLVVTEGCAMTCSADKLLRLWPLDFSDFLback to top mRNA from alignment at H-elongata_contig130804:324..1370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig130804.2229.1 ID=mRNA_H-elongata_contig130804.2229.1|Name=mRNA_H-elongata_contig130804.2229.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1047bp|location=Sequence derived from alignment at H-elongata_contig130804:324..1370- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig130804:324..1370- >mRNA_H-elongata_contig130804.2229.1 ID=mRNA_H-elongata_contig130804.2229.1|Name=mRNA_H-elongata_contig130804.2229.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig130804:324..1370- (Himanthalia elongata Himel1 dioecious)back to top |