mRNA_H-elongata_contig13079.2227.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig13079.2227.1
Unique NamemRNA_H-elongata_contig13079.2227.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: D8LBF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF6_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 2.160e-128
Identity = 212/389 (54.50%), Postives = 270/389 (69.41%), Query Frame = 1
Query:    1 RLARIADELHFARTSLKDELESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRVARGGAGRRRARVIRANIA 1167
            RL RIA+ELHFAR S ++ +ES  P SV+ +G T FRR D IDEL+ EQS+LR  LKLH ID+EFH+A++TS++HIECVALHGYR L+WTKDARVALEREH+RLVAR VA E  HDIL  MLEGW+FGERQS +A +G  P++   G +K   + + R     + +  R ED+   LT+PP +DGS W+   E +VK GG+HD+EI   E ++RFGL CVT+M+FRARWLL ++R      KLGW IDTSVPVRA+ S+   Q+  +STQ G+QRVKV                       RKE+EQA+V+ADFAGF+AV+ RE+ A+QL+QR+ RGHI RKA+HRWR KRAEY A N+L+VS A+          GR RA+ IRA IA
Sbjct:  170 RLERIAEELHFARISTENMIESTWPSSVEMDGNTYFRRVDFIDELSSEQSYLRQRLKLHFIDEEFHEANRTSKQHIECVALHGYRTLLWTKDARVALEREHNRLVARAVAIEVTHDILKWMLEGWHFGERQSEHATLGHTPTVDVDGLVK---EDEARTGDT-RSLHERNEDKANMLTVPPGVDGSSWNNVSERIVKEGGIHDKEIGFMESTMRFGLFCVTVMYFRARWLLHRQRNCASDFKLGWAIDTSVPVRAQ-SKPVSQMTVSSTQPGYQRVKV-----------------------RKEKEQAEVLADFAGFVAVEKRELDASQLIQRILRGHIGRKAAHRWREKRAEYNATNSLMVSAAVFXXXXXXXXWGRSRAKTIRAGIA 530          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A6H5KP51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP51_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 7.910e-117
Identity = 211/389 (54.24%), Postives = 266/389 (68.38%), Query Frame = 1
Query:    1 RLARIADELHFARTSLKDELESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRVARGGAGRRRARVIRANIA 1167
            RL RIA+ELHFAR S ++ +ES  P SV+ +G T FRR D IDEL+ EQS+LR  LKLH ID+EFH+A++TS++HIECVALHGYR L+WTKDARVALEREH+RLVA  VA E  HDIL  MLEGW+FGERQS +A++   P++   G      + + R E        R ED+   LT+PP IDGS W+   E +VK GG+HD+EI   E ++RFGL CVT+M+FRARWLL ++R      KLGW IDTSVPVRA+ S+   Q+  +STQ G+QRVKV                       RKE+EQA+V+ADFAGF+AV+ RE+ A+QL+QR+ RGHI RKA+HRWR KRAEY A N+L+VS A+          GR RA+ IRA IA
Sbjct: 1389 RLERIAEELHFARISTENMIESTWPSSVEMDGNTIFRRVDFIDELSSEQSYLRQRLKLHFIDEEFHEANRTSKQHIECVALHGYRTLLWTKDARVALEREHNRLVAHAVAVEVTHDILQWMLEGWHFGERQSEHASLRHTPAVDVDGL-----EDEARTE--------RNEDKANMLTVPPGIDGSSWNNVSERIVKEGGIHDKEIEFMESTMRFGLFCVTVMYFRARWLLHRQRNCASDFKLGWTIDTSVPVRAQ-SKPVNQMTVSSTQPGYQRVKV-----------------------RKEKEQAEVLADFAGFVAVEKRELDASQLIQRILRGHIGRKAAHRWREKRAEYNATNSLMVSAAVFXXXXXXXXWGRSRAKTIRAGIA 1740          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A836C9U4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U4_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.670e-77
Identity = 165/380 (43.42%), Postives = 220/380 (57.89%), Query Frame = 1
Query:   43 SLKDELESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAG--KDAKMRVEPCPKEVKVR---REDRHTSLTLPPEIDGSRWSKSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRVARGGAGRRRARVIRANIA 1167
            +L+   ES +P SV R G T+FRR DL+ ELT E+SHL  ML+L  +D E+H A KT+   +EC ALHGY  + WT DAR AL RE DR+VA+L A+E    IL  MLEGW+FGER+S     G VPSIK  GF+ AG   DA   V+  P+  + R    E    + TLPP++ GS W+ S+E VVK G   D+ I  +E ++RFGL C+TIMFFR+R+LL+++ E  +Q +     D + P            G     A      V+  P    + P  QR       VR+ER++ +  A+FAG L  + +E  AA LLQR  RGHI RKA  RW  +R E  A+NAL+ + AL +QRV RG   RR A  +R  +A
Sbjct:  141 NLQAVFESTIPNSVARGGGTSFRREDLLYELTRERSHLTFMLRLDAVDAEYHQALKTTAPSMECQALHGYHTMQWTSDARTALGRERDRMVAQLTATEMAEGILDWMLEGWHFGERRSLKTVAGFVPSIKPDGFVGAGFESDALATVQEHPQATQDRLDAEESLRQAYTLPPDMPGSHWAPSEEKVVKPGSERDKAIAEAERAVRFGLFCLTIMFFRSRYLLKKRMEAAQQFER----DANGPXXXXXXXXXXXXGVVLATAA-----VTGAP---AAQPGSQRVARM---VREERQRTR--ANFAGSLRQERKEREAALLLQRAVRGHIGRKAGRRWLKRRRELLALNALMHAAALALQRVFRGWRARRHATAVRVRLA 503          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A8J2SQY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQY8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.690e-61
Identity = 149/383 (38.90%), Postives = 214/383 (55.87%), Query Frame = 1
Query:    1 RLARIADELHFARTSLKDE-LESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKM-RVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKS------DELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVK----GREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRV 1113
            R  +I+DEL + R     + LES +PLS  R G   FRR DL+ ELTWE   L    +L  +D+E HDA  T++E++E  ALHGY  +MWT +AR ALERE +R VA +VAS+ + D L  MLEGW+FGER+SRY+  G VPS+K  GF++AG D  + + +   +  K   E R  ++T  P     +  ++       E V K G  H++ ++ +E +L+FGL C+T+MFFRA  L+R++R+             S    A  S+  PQ  T   +    R + +    R+    H   +    G+ R  +  AK  A+ A  L  K     RE+ A   LQ  YRGH+ RKA+ RW  KRAE +AMNAL+ ++A+TI+RV
Sbjct: 2762 RRQQISDELVYVRMHPDVKVLESYVPLSAARGGNPNFRRDDLLYELTWEDKQLAMRSRLDALDRELHDAHATNKEYMEVKALHGYATMMWTNNARRALERERNRYVAMVVASDIVDDALEWMLEGWHFGERESRYSVAGYVPSLKSDGFVRAGSDQVLAQADAEDRAAKRSNEQRDEAVTGSPRTKAEKIERNAQFRLGTEKVAKDGNDHEKHLDFTETTLKFGLFCITLMFFRAMSLVRRERDT-----------FSGTHDAITSEGNPQKPTEERRK--MRREKALLEERQKKMQHVLNRA-KVGEERTRKRLAKERAEAASKLHEKVRREKRELQACAKLQAFYRGHLGRKAARRWAVKRAELEAMNALMTASAITIERV 3130          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A7S2AMC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMC1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.120e-59
Identity = 139/382 (36.39%), Postives = 211/382 (55.24%), Query Frame = 1
Query:    1 RLARIADELHFARTSLKDE-LESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTS-------------LTLPPEIDGSRWSKSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGF---LAVKGR----EVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALL 1083
            R  +I+DE+H+ R     E +ES +PLSV R G   FRR DLI ELTWE + L   ++++ ID+E HDA  T +E+ E   LHGY  L+W K+AR ALEREH++LVA   A + + DIL  ML+GWYFGER+S++   G VPSIKK GFI+ G + + R+    ++  V +E + ++                 P  D ++W  S+E  VK G   + +++S+EI+LRFG+  +T M+FRA   LR+++         W  +      A  +Q   +   T      +R+K++A    R     +        +  +ER + +  A+  G    L +K R    E  +A ++QRV+RGH+ RK + RW  KRAE +A+NAL+
Sbjct:  485 RRRKISDEMHYLRMHKGAEVIESYVPLSVMRGGNPHFRREDLIGELTWEDTQLARQIRINGIDKELHDAYATKKEYFEVKVLHGYHSLLWVKNARKALEREHNKLVAMTTAVDLVDDILETMLDGWYFGERESQFTVAGFVPSIKKDGFIRVGNE-QARLNQVAEQRHVNKEGKRSAGEEFETEKEGDPHEKAKPIDDTAQWRLSNEKAVKKGSDREHQLDSTEITLRFGMFMLTFMYFRALSQLRREKNS-------WGTNED----AVSNQGVKKQKHTD-----ERMKMTAEERAREDREKRLDMALRRAKTGEERRRVREAAEKRGAVERLLIKVRKEKAEKASAAVVQRVFRGHLGRKVARRWAMKRAELQALNALM 849          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A482SN64_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN64_9ARCH)

HSP 1 Score: 188 bits (478), Expect = 5.280e-50
Identity = 133/376 (35.37%), Postives = 196/376 (52.13%), Query Frame = 1
Query:   61 ESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSDEL------------VVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVI-DTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHR-----RYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRVARGGAGR 1134
            ES + LS Q  G   FRR DL+DEL  E   L   + L  +D+E HDA  T +E  E   LHGY +++WT +AR AL+    RL A +VA E + DIL  MLEGW FGERQS++ A+G VP+IKK G I+AG++    V     +++ R E +   +       G+ + K+ E+            V +    H+  +N +E +L+FGL  + +M+FRA   LR++++        W   D  + V+ K+  N             +  KVS R  +       S   ++R+     Q RKE      +A     +  +  E+ +  L+Q++YRGH+ RK + RW  KRAE  AMNALL +TA+TIQR+ RG  GR
Sbjct:  317 ESDISLSAQLGGNRIFRRHDLLDELNDEIRELLLRIDLTNVDREVHDAFATRKEFFESTHLHGYTVMLWTNNARKALDARQSRLCALVVAKEVVEDILDYMLEGWVFGERQSQFHALGFVPTIKKDGNIRAGQEQVSSVIAVVNKMRERAEKKRQGIVADEAKRGTMFEKAYEIELTNQEKKAEIKVARDKNEHEHLLNETENTLKFGLFMLALMYFRAMTFLRREQKS-------WSAEDDEIGVKNKKKVNKTMTDERMRMLDEEN-KVSLRQKKIDLILAKSLVGEKRRKEREAQERKE-----AIAKMQAVIRRQKLEMISICLIQKLYRGHVGRKVAKRWALKRAELGAMNALLNATAVTIQRIYRGFKGR 679          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A7S3Y515_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y515_HETAK)

HSP 1 Score: 184 bits (466), Expect = 1.130e-47
Identity = 137/399 (34.34%), Postives = 196/399 (49.12%), Query Frame = 1
Query:    1 RLARIADELHFARTSLK-DELESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVR-------RED--RHTSLTLPPEIDGSRWSKSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNALLVSTALTIQRVARGGAGRRRARVIRANIA 1167
            R+  + +EL F R +   D  +S++P  V+  G T F R DLI  L  E    R  L+L  ID+E H A   +++++   AL+GY  ++WT DAR ALER  ++L+A  +A E   DIL  MLEGW+FGER S     G VPSIK  G   A K  ++  +   +  K R       +ED     +  LPP+   S W  + E VVK G  HD  +    + L+FGL CV  M+FRA  LLR   +   +M               R++N   +     +A   + +  AR                  Q+++E+E+A     F G + +   E      LQRV RGHI RKA  ++  K  EY+A  AL+ +  +T+QRV RG  GR+RA  +R  IA
Sbjct:  535 RMEVLEEELQFVRVNPDVDVFDSVVPRGVKEGGSTRFFRRDLIHVLDQELREHRRALRLEAIDEELHRAYSGTKDYLWLKALNGYDQVLWTDDARTALERARNKLIAEKLAVEVADDILDWMLEGWHFGERPSNLQTAGFVPSIKP-GSPVAIKKPELSFDQRQEARKKRDLEQLKAKEDLVNFKTKVLPPDHPDSMWHPTGEKVVKPGNQHDIALKKVHVHLKFGLYCVAAMYFRAIHLLRNPDQARLEMN--------------RAKNRRALIAPIKEATRAKDETGAR----------------RRQLQEEKEEASKRRKFRGAVELAKAEARGTAALQRVVRGHIGRKAGLKFSLKVLEYRAFRALVYACVITVQRVFRGWKGRQRASRVRRGIA 902          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A7S3MGW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGW7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 5.640e-43
Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 1
Query:   61 ESLLPLSVQRNGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSDELVVKA------------GGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREG 711
            ES + LSVQ  G   F+R DL+DEL +E   L   + L+ ID+E HDA  T +E+ E   LHGY +L+WT +AR+ALE    RL A  V+ E + DIL  MLEGWYFGER+S++  +G VP+IK TG ++AG+D    V     ++K R  +R  ++       G    K+ E+ V A            G  H+  +N +E +L+FG+  +T+M+FRA   L+++++ 
Sbjct:   40 ESDVCLSVQLGGNRVFKRQDLVDELMYEIRELGQRIDLNNIDRELHDAYATRKEYFESKYLHGYSLLLWTNNARMALEMRQSRLCALSVSKEVVDDILDWMLEGWYFGERESQFKVLGYVPTIKATGKVRAGQDQISSVAQVVAKMKTRANNRRNNIATAQSTQGLMIEKAWEVEVGAQQKLESLKVARDGNEHEHMLNETETTLKFGIFMMTLMYFRAMTFLKREQKS 268          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A8K1FM51_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM51_PYTOL)

HSP 1 Score: 157 bits (398), Expect = 1.830e-38
Identity = 114/371 (30.73%), Postives = 187/371 (50.40%), Query Frame = 1
Query:    1 RLARIADELHFARTSLKDELESLLPLSVQRNG--VTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPE----IDGSRWS-KSDELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKG----REVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNAL 1080
            R+  + +EL   + S    + S + L+  ++G    T R++DL DELT E       L+L  +D EFHD   + +++ E  ALHG+  +  T+  +VAL+REH+ LVA L A E + DIL  MLEGW FGER+S    +G VPS+K+ G +      ++  E    + K   ++      +P +    I+ S +   +    VK G   D+++  +E +L+FG+ C+T+M+FR   LL       K+ K  W        +++ S N  +      QA +    V+AR  +   +  + R     G  RK++ Q + +A +   + ++     RE  AA  +QR+YRGH+ R+A  +W  +R E  A  AL
Sbjct: 2126 RIEILQEELEAVKRSPDPVITSTVCLAAVKSGNRAVTLRKSDLFDELTLELKIWDKNLRLRAVDAEFHDTFGSKEQYFETKALHGFPQVQLTEKVQVALQREHNSLVANLTACEVVEDILEFMLEGWVFGERESERRVMGYVPSLKREGPLTMQDLRRLEQERRVVDAKASLKEEEDIQGIPLDKWKPIEVSAFELNTKNKAVKKGSALDKQLTETENALKFGIFCMTLMYFRGLSLL-------KKQKTVWSTSALKNQKSRSSSNIAERKRMDLQARN----VAARDKKAALYDEKAR----IGMARKQKLQEQQVAAYRRRMVLENQKAKREARAALYIQRMYRGHMGRRAGKKWMIRRREIDAQRAL 2481          
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Match: A0A3F2RT84_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RT84_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.270e-37
Identity = 108/343 (31.49%), Postives = 172/343 (50.15%), Query Frame = 1
Query:   91 NGVTTFRRTDLIDELTWEQSHLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALEREHDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIKAGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSD---------ELVVKAGGVHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTSVPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQVRKEREQAKVMADFAGFLAVKGR----EVGAAQLLQRVYRGHISRKASHRWRAKRAEYKAMNAL 1080
            N   T R++DL DELT E       L+L  +D+EFH+  ++  E  E  ALHG+R +      +VAL+REH+ LVA L A E + DIL  MLEGW FGER+S    +G VPS+K+ G +   +D + R E   + ++++++ R   +     +   +W   +         +  V+ G   D+ +  +E +L+FGL C+T+M+FR   LL       K+ K  W    SV    +R+   P       +   ++  +  R  +   +  + R    NGQ RK++ Q + +A +   L  + R    E  AA  +QR+YRGH+ + A  +W  +R E  A  AL
Sbjct: 1131 NQAITLRKSDLFDELTLEVKIWEKNLRLKAVDEEFHETFRSKNEFFETQALHGFRQIQHKTKVQVALQREHNILVAHLTAYEVVEDILESMLEGWNFGERKSDRQVLGYVPSLKREGPLTM-QDLR-RFEQDRRILQIQQDIREEQMLNAQGLPSDKWKPIEVEAFHINLNKKAVQKGSELDKSLTETENALKFGLFCMTLMYFRGLSLL-------KKQKSVW----SVSATKRRTAADPPKSAERRRMDKEKRNIDLRARKAALYDEKAR----NGQARKQKFQEQKLAAYRKRLVDENRKAKRERRAATDIQRIYRGHLGKSAGKKWMVRRREINAQRAL 1456          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13079.2227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBF6_ECTSI2.160e-12854.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP51_9PHAE7.910e-11754.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C9U4_9STRA4.670e-7743.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SQY8_9STRA1.690e-6138.90Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2AMC1_9STRA5.120e-5936.39Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A482SN64_9ARCH5.280e-5035.37Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S3Y515_HETAK1.130e-4734.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3MGW7_9STRA5.640e-4338.86Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8K1FM51_PYTOL1.830e-3830.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RT84_9STRA6.270e-3731.49Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13079contigH-elongata_contig13079:6485..7924 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.9
Seed ortholog evalue1.8e-106
Seed eggNOG ortholog2880.D8LBF6
EggNOG OGs28RFJ@1,2QY4N@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1167
Cds size1167
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13079.2227.1prot_H-elongata_contig13079.2227.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig13079 6485..7924 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929777.0144217-CDS-H-elongata_contig13079:6484..67931622929777.0144217-CDS-H-elongata_contig13079:6484..6793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 6485..6793 -
1691679153.726011-CDS-H-elongata_contig13079:6484..67931691679153.726011-CDS-H-elongata_contig13079:6484..6793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 6485..6793 -
1622929777.0339448-CDS-H-elongata_contig13079:6816..72061622929777.0339448-CDS-H-elongata_contig13079:6816..7206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 6817..7206 -
1691679153.7353797-CDS-H-elongata_contig13079:6816..72061691679153.7353797-CDS-H-elongata_contig13079:6816..7206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 6817..7206 -
1622929777.0484636-CDS-H-elongata_contig13079:7456..79241622929777.0484636-CDS-H-elongata_contig13079:7456..7924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 7457..7924 -
1691679153.744899-CDS-H-elongata_contig13079:7456..79241691679153.744899-CDS-H-elongata_contig13079:7456..7924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig13079 7457..7924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig13079.2227.1

>prot_H-elongata_contig13079.2227.1 ID=prot_H-elongata_contig13079.2227.1|Name=mRNA_H-elongata_contig13079.2227.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=389bp
RLARIADELHFARTSLKDELESLLPLSVQRNGVTTFRRTDLIDELTWEQS
HLRHMLKLHLIDQEFHDASKTSQEHIECVALHGYRMLMWTKDARVALERE
HDRLVARLVASETIHDILACMLEGWYFGERQSRYAAVGCVPSIKKTGFIK
AGKDAKMRVEPCPKEVKVRREDRHTSLTLPPEIDGSRWSKSDELVVKAGG
VHDEEINSSEISLRFGLVCVTIMFFRARWLLRQKREGEKQMKLGWVIDTS
VPVRAKRSQNFPQIGTTSTQAGHQRVKVSARPHRRYSFPHQQRKTYSNGQ
VRKEREQAKVMADFAGFLAVKGREVGAAQLLQRVYRGHISRKASHRWRAK
RAEYKAMNALLVSTALTIQRVARGGAGRRRARVIRANIA
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mRNA from alignment at H-elongata_contig13079:6485..7924-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig13079.2227.1 ID=mRNA_H-elongata_contig13079.2227.1|Name=mRNA_H-elongata_contig13079.2227.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1440bp|location=Sequence derived from alignment at H-elongata_contig13079:6485..7924- (Himanthalia elongata Himel1 dioecious)
CGCTTGGCACGAATCGCTGACGAGCTCCACTTTGCCCGGACGAGCTTGAA GGACGAGCTCGAGAGTTTACTGCCGCTCTCGGTACAAAGGAACGGAGTTA CAACCTTTCGACGTACCGACCTCATCGACGAGCTTACCTGGGAGCAAAGC CACCTAAGGCATATGCTAAAGCTCCACTTGATTGATCAGGAGTTTCACGA CGCCAGCAAGACTTCCCAAGAACACATTGAATGTGTCGCGTTGCACGGCT ATCGCATGCTGATGTGGACCAAAGATGCCCGGGTTGCCCTGGAGCGCGAG CATGACCGACTCGTGGCTCGTCTTGTAGCCTCTGAAACTATACACGATAT CTTGGCATGTATGCTTGAAGGGTGGTATTTTGGGGAGCGGCAATCTCGCT ACGCGGCCGTGGGATGTGTCCCTAGCATAAAAAAGACTGGATTTATCAAA GCGGGAAAAGACGCCAAGGTGATGGGCGAGAATCCCACAATCAACACTGC ATGACAACCACTTTGGGGCTTTAGAACAGTAAACTGTTAATAAGGGAAAG TGCTCATAATCAACATTTTCTAAGTTTGTAACGCGATAGCTTGGTGGTTG TCAAGAGCTTTATAGACAGCAGATATGCATCCACGACGGACAATTGATGC GTCTTCCCCGCGAAATTTATGACTCGACTGCAACGATCCGTTCAATTTCC ACTCGATCACTGCTGTAGATGAGAGTGGAGCCTTGCCCAAAAGAGGTCAA GGTACGAAGAGAAGACAGACATACTTCATTGACTCTCCCACCAGAGATTG ACGGAAGTAGATGGAGCAAGAGTGACGAGCTCGTCGTAAAAGCTGGTGGA GTACACGACGAAGAGATCAACTCCTCGGAGATATCTTTACGGTTTGGTCT AGTTTGTGTGACGATCATGTTCTTCCGTGCACGGTGGCTTCTCCGGCAAA AGAGAGAAGGGGAAAAACAAATGAAGCTTGGATGGGTTATCGACACCAGT GTTCCCGTGCGAGCCAAGCGCAGTCAAAACTTCCCTCAAATAGGCACCAC CAGCACTCAAGCAGGTCATCAACGAGTTAAGGTAAGTGCCCGACCACATC GTCGCTATGTTTTTTTATTAGGTTGTATCAGTCATTCCCACATCAACAAC GGAAAACATATTCGAATGGCCAGGTGAGAAAGGAAAGGGAGCAAGCGAAG GTGATGGCAGACTTCGCTGGGTTTCTTGCAGTGAAAGGTAGAGAGGTTGG TGCTGCGCAGCTCCTACAACGTGTCTACCGCGGACATATCAGTCGCAAGG CAAGCCACCGATGGCGTGCGAAGCGAGCCGAGTACAAAGCCATGAATGCC CTCTTGGTATCTACGGCTCTGACGATACAGCGTGTGGCCAGGGGTGGGGC GGGAAGGAGGCGAGCTCGTGTCATTCGAGCGAACATTGCG
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Coding sequence (CDS) from alignment at H-elongata_contig13079:6485..7924-

>mRNA_H-elongata_contig13079.2227.1 ID=mRNA_H-elongata_contig13079.2227.1|Name=mRNA_H-elongata_contig13079.2227.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2334bp|location=Sequence derived from alignment at H-elongata_contig13079:6485..7924- (Himanthalia elongata Himel1 dioecious)
CGCTTGGCACGAATCGCTGACGAGCTCCACTTTGCCCGGACGAGCTTGAA
GGACGAGCTCGAGAGTTTACTGCCGCTCTCGGTACAAAGGAACGGAGTTA
CAACCTTTCGACGTACCGACCTCATCGACGAGCTTACCTGGGAGCAAAGC
CACCTAAGGCATATGCTAAAGCTCCACTTGATTGATCAGGAGTTTCACGA
CGCCAGCAAGACTTCCCAAGAACACATTGAATGTGTCGCGTTGCACGGCT
ATCGCATGCTGATGTGGACCAAAGATGCCCGGGTTGCCCTGGAGCGCGAG
CATGACCGACTCGTGGCTCGTCTTGTAGCCTCTGAAACTATACACGATAT
CTTGGCATGTATGCTTGAAGGGTGGTATTTTGGGGAGCGGCAATCTCGCT
ACGCGGCCGTGGGATGTGTCCCTAGCATAAAAAAGACTGGATTTATCAAA
GCGGGAAAAGACGCCAAGCGCTTGGCACGAATCGCTGACGAGCTCCACTT
TGCCCGGACGAGCTTGAAGGACGAGCTCGAGAGTTTACTGCCGCTCTCGG
TACAAAGGAACGGAGTTACAACCTTTCGACGTACCGACCTCATCGACGAG
CTTACCTGGGAGCAAAGCCACCTAAGGCATATGCTAAAGCTCCACTTGAT
TGATCAGGAGTTTCACGACGCCAGCAAGACTTCCCAAGAACACATTGAAT
GTGTCGCGTTGCACGGCTATCGCATGCTGATGTGGACCAAAGATGCCCGG
GTTGCCCTGGAGCGCGAGCATGACCGACTCGTGGCTCGTCTTGTAGCCTC
TGAAACTATACACGATATCTTGGCATGTATGCTTGAAGGGTGGTATTTTG
GGGAGCGGCAATCTCGCTACGCGGCCGTGGGATGTGTCCCTAGCATAAAA
AAGACTGGATTTATCAAAGCGGGAAAAGACGCCAAGATGAGAGTGGAGCC
TTGCCCAAAAGAGGTCAAGGTACGAAGAGAAGACAGACATACTTCATTGA
CTCTCCCACCAGAGATTGACGGAAGTAGATGGAGCAAGAGTGACGAGCTC
GTCGTAAAAGCTGGTGGAGTACACGACGAAGAGATCAACTCCTCGGAGAT
ATCTTTACGGTTTGGTCTAGTTTGTGTGACGATCATGTTCTTCCGTGCAC
GGTGGCTTCTCCGGCAAAAGAGAGAAGGGGAAAAACAAATGAAGCTTGGA
TGGGTTATCGACACCAGTGTTCCCGTGCGAGCCAAGCGCAGTCAAAACTT
CCCTCAAATAGGCACCACCAGCACTCAAGCAGGTCATCAACGAGTTAAGG
TAAGTGCCCGACCACATCGTCGCTATATGAGAGTGGAGCCTTGCCCAAAA
GAGGTCAAGGTACGAAGAGAAGACAGACATACTTCATTGACTCTCCCACC
AGAGATTGACGGAAGTAGATGGAGCAAGAGTGACGAGCTCGTCGTAAAAG
CTGGTGGAGTACACGACGAAGAGATCAACTCCTCGGAGATATCTTTACGG
TTTGGTCTAGTTTGTGTGACGATCATGTTCTTCCGTGCACGGTGGCTTCT
CCGGCAAAAGAGAGAAGGGGAAAAACAAATGAAGCTTGGATGGGTTATCG
ACACCAGTGTTCCCGTGCGAGCCAAGCGCAGTCAAAACTTCCCTCAAATA
GGCACCACCAGCACTCAAGCAGGTCATCAACGAGTTAAGGTAAGTGCCCG
ACCACATCGTCGCTATTCATTCCCACATCAACAACGGAAAACATATTCGA
ATGGCCAGGTGAGAAAGGAAAGGGAGCAAGCGAAGGTGATGGCAGACTTC
GCTGGGTTTCTTGCAGTGAAAGGTAGAGAGGTTGGTGCTGCGCAGCTCCT
ACAACGTGTCTACCGCGGACATATCAGTCGCAAGGCAAGCCACCGATGGC
GTGCGAAGCGAGCCGAGTACAAAGCCATGAATGCCCTCTTGGTATCTACG
GCTCTGACGATACAGCGTGTGGCCAGGGGTGGGGCGGGAAGGAGGCGAGC
TCGTGTCATTCGAGCGAACATTGCGTCATTCCCACATCAACAACGGAAAA
CATATTCGAATGGCCAGGTGAGAAAGGAAAGGGAGCAAGCGAAGGTGATG
GCAGACTTCGCTGGGTTTCTTGCAGTGAAAGGTAGAGAGGTTGGTGCTGC
GCAGCTCCTACAACGTGTCTACCGCGGACATATCAGTCGCAAGGCAAGCC
ACCGATGGCGTGCGAAGCGAGCCGAGTACAAAGCCATGAATGCCCTCTTG
GTATCTACGGCTCTGACGATACAGCGTGTGGCCAGGGGTGGGGCGGGAAG
GAGGCGAGCTCGTGTCATTCGAGCGAACATTGCG
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