mRNA_H-elongata_contig130715.2224.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: D8LLT6_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT6_ECTSI) HSP 1 Score: 355 bits (911), Expect = 6.730e-120 Identity = 164/186 (88.17%), Postives = 176/186 (94.62%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
AA+ FWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQG+GIFLFNKLSQISEWKKDHRWKADQPQAE YIAQRYVENPYLIGGKKFDLRLY+LVTSFNPLTVWLY+ GFARFSG+RYC+DRA LAN YVHLTNVAIQKKA DYDK+VGCKWDL SLK+F+T+KHG AVDELFY++QCLITR
Sbjct: 103 AASYCFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKAEDYDKEVGCKWDLQSLKMFLTLKHGARAVDELFYDMQCLITR 288
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A6H5L5D5_9PHAE (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D5_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.010e-108 Identity = 148/168 (88.10%), Postives = 160/168 (95.24%), Query Frame = 1
Query: 55 MFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
MFVEEFKRSPGAVWIMKPIGRAQG+GIFLFNKLSQISEWKKDHRWKADQPQAE YIAQRYVENPYLIGGKKFDLRLY+LVTSFNPLTVWLY+ GFARFSG+RYC+DRA LAN YVHLTNVAIQKK+ DYDK+VGCKWDL SLK+F+T+KHG AVDELFY++QCLITR
Sbjct: 1 MFVEEFKRSPGAVWIMKPIGRAQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYVHLTNVAIQKKSEDYDKEVGCKWDLQSLKMFLTLKHGARAVDELFYDMQCLITR 168
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A835ZCT8_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT8_9STRA) HSP 1 Score: 286 bits (733), Expect = 6.750e-94 Identity = 126/186 (67.74%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
AA +FWT TF+LP+EY MF+EEF+R P ++WIMKP RAQG+GIFLFNKLSQIS+WKKDH W+ DQPQAE+YIAQRY+ NP +GGKKFDLRLY+LVTSF+PL VWLY GFARFSG RY +R + N+YVHLTNVAIQKKA YD+ VGCK LH+LK+ +T +HG AVDELF++++CL+ R
Sbjct: 76 AAAYNFWTETFILPNEYSMFIEEFRRWPDSMWIMKPTNRAQGRGIFLFNKLSQISDWKKDHNWRPDQPQAESYIAQRYIMNPCTVGGKKFDLRLYVLVTSFSPLAVWLYGAGFARFSGQRYTQERGSMGNVYVHLTNVAIQKKAEGYDRGVGCKLALHALKLLLTARHGAAAVDELFHDMECLVVR 261
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A7S3G4H5_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=6 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H5_9EUKA) HSP 1 Score: 275 bits (704), Expect = 5.510e-89 Identity = 124/186 (66.67%), Postives = 150/186 (80.65%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
AA F+ TFVLP+EYG+F EE+K+ PG+VWIMKPIG+AQGKGIFLFNKLSQISEW+KDH+WKAD PQAETYI QRY+ENPYLIGGKKFDLR+Y++VTS+NPLTV+LY GF RFS R+ + E+ N ++HLTNVAIQK +Y GCKW L SLK+++ KHG AV+E FYEIQ +I R
Sbjct: 101 AAKYDFFPSTFVLPAEYGLFHEEYKKQPGSVWIMKPIGKAQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHGPDAVNESFYEIQQMIIR 286
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A7S3G4H8_9EUKA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G4H8_9EUKA) HSP 1 Score: 270 bits (691), Expect = 8.180e-89 Identity = 120/180 (66.67%), Postives = 146/180 (81.11%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEI 540
AA F+ TFVLP+EYG+F EE+K+ PG+VWIMKPIG+AQGKGIFLFNKLSQISEW+KDH+WKAD PQAETYI QRY+ENPYLIGGKKFDLR+Y++VTS+NPLTV+LY GF RFS R+ + E+ N ++HLTNVAIQK +Y GCKW L SLK+++ KHG AV+E FYE+
Sbjct: 101 AAKYDFFPSTFVLPAEYGLFHEEYKKQPGSVWIMKPIGKAQGKGIFLFNKLSQISEWRKDHKWKADSPQAETYIVQRYIENPYLIGGKKFDLRIYVMVTSYNPLTVYLYRSGFGRFSNERFSMRKDEIQNNFIHLTNVAIQKTNPEYQAGTGCKWSLRSLKLYLMSKHGPDAVNESFYEV 280
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A024TT08_9STRA (Tubulin--tyrosine ligase-like protein 9 n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TT08_9STRA) HSP 1 Score: 273 bits (697), Expect = 1.280e-88 Identity = 124/188 (65.96%), Postives = 150/188 (79.79%), Query Frame = 1
Query: 4 ATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQA---ETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
A FW+ TFVLP EYGMF+EEFKR PGA+WIMKPIG+AQGKGIFLF KLSQIS+WKKDH WK+D QA +TYI Q+Y++NPY IGGKKFDLRLY+LVTSF+PL VW+Y GF RFS +RY +A++ NLY+HLTN ++QK A DYDK +G KW L S+K F+ KHG AVD LFY+IQ +IT+
Sbjct: 118 AAADFWSLTFVLPMEYGMFLEEFKRYPGAMWIMKPIGKAQGKGIFLFEKLSQISDWKKDHTWKSDGLQAKTSDTYIVQKYIQNPYTIGGKKFDLRLYVLVTSFSPLVVWMYRAGFGRFSNARYSQAKADMDNLYMHLTNASVQKTAHDYDKSMGSKWPLDSIKQFLVSKHGVRAVDSLFYDIQSVITK 305
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: W4GDH7_9STRA (Tubulin--tyrosine ligase-like protein 9 n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDH7_9STRA) HSP 1 Score: 272 bits (695), Expect = 6.580e-87 Identity = 123/184 (66.85%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 16 FWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQA---ETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
FW+ TFVLP EYGMF+EEFKR PGA+WIMKPIG+AQGKGIFLF KLSQIS+WKKDH WK D QA +TYI Q+Y+ENPY IGGKKFDLRLY+LVTSF+PL VW Y GF RFS +RY +A++ NLY+HLTN ++QK A DYDK +GCKW L S+K F+ KHG AVD LF++IQ ++T+
Sbjct: 136 FWSLTFVLPMEYGMFLEEFKRFPGAMWIMKPIGKAQGKGIFLFEKLSQISDWKKDHTWKPDGLQAKTSDTYIVQKYIENPYTIGGKKFDLRLYVLVTSFSPLVVWTYRAGFGRFSNARYSQAKADMDNLYMHLTNASVQKTAQDYDKSMGCKWPLDSIKQFLISKHGVRAVDSLFHDIQTVVTK 319
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A8K1CJ20_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ20_PYTOL) HSP 1 Score: 269 bits (688), Expect = 1.570e-86 Identity = 119/190 (62.63%), Postives = 151/190 (79.47%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKAD----QPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
A FW TFVLP+EYGMFVEEFKR+PG WIMKPIG+AQGKGIFLF+KLS+I++WK+DH WK++ A+TYI Q+Y+ENPY IGGKKFDLRLY+LVTSF+PLT W+Y GF RFS +RY + + ++ NLY+HLTN ++QK A DYD +GCKW L LK+F+ KHG+ AVD+LF++IQ +ITR
Sbjct: 109 AENYDFWAATFVLPTEYGMFVEEFKRNPGGRWIMKPIGKAQGKGIFLFDKLSEINDWKRDHTWKSEGGVQAKTADTYIVQKYIENPYTIGGKKFDLRLYVLVTSFSPLTFWIYRAGFGRFSNARYSAHKDDIDNLYMHLTNASVQKTADDYDSSMGCKWLLQHLKMFLMSKHGRDAVDQLFHDIQMVITR 298
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A6A3S929_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3S929_9STRA) HSP 1 Score: 268 bits (685), Expect = 4.070e-86 Identity = 121/190 (63.68%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKADQPQ----AETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
A FW TFVLP EYGMF+EEFKR+PG WIMKP+G+AQG+GIFLF KLS ISEWK+D WK D A+TYI Q+YVE+PYL+GGKKFDLRLY+LVTSF+PL+ WLY GFARFS +RY R ++ NL++HLTN ++Q+ A DYD+ +GCKW LHSLK+F+ KHG+ AVD LF+ IQ LITR
Sbjct: 110 AELYEFWAATFVLPHEYGMFLEEFKRTPGGRWIMKPVGKAQGRGIFLFEKLSDISEWKRDASWKGDGAMQAKTADTYIVQKYVESPYLLGGKKFDLRLYVLVTSFSPLSFWLYRAGFARFSHTRYSQSRGDMDNLFMHLTNASVQRGADDYDERLGCKWPLHSLKMFLISKHGQEAVDRLFFSIQSLITR 299
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Match: A0A5D6XG91_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG91_9STRA) HSP 1 Score: 266 bits (680), Expect = 9.850e-86 Identity = 121/190 (63.68%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 1 AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKLSQISEWKKDHRWKAD----QPQAETYIAQRYVENPYLIGGKKFDLRLYILVTSFNPLTVWLYSRGFARFSGSRYCSDRAELANLYVHLTNVAIQKKAGDYDKDVGCKWDLHSLKVFMTIKHGKHAVDELFYEIQCLITR 558
A FW TFVLP+EYG+F+EEFKRS G WIMKPIG+AQG+GIFLF+KLS ISEWK+DH WK D A+TYI Q+YVE+PY +GGKKFDLRLY+LVTSF+PL W+Y GFARFS SRY + ++ NLY+HLTN ++QK A DY++ VGCKW LHSLK+F+ KHG VD LF++IQ LITR
Sbjct: 80 AERYDFWASTFVLPAEYGLFLEEFKRSTGGRWIMKPIGKAQGRGIFLFDKLSDISEWKRDHTWKGDGGLQAKTADTYIVQKYVESPYTVGGKKFDLRLYVLVTSFSPLAFWVYRAGFARFSNSRYSQSKDDIDNLYMHLTNASVQKTAEDYNESVGCKWPLHSLKMFLVGKHGVDTVDRLFHDIQQLITR 269 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130715.2224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig130715.2224.1 >prot_H-elongata_contig130715.2224.1 ID=prot_H-elongata_contig130715.2224.1|Name=mRNA_H-elongata_contig130715.2224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp AATLSFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGKGIFLFNKback to top mRNA from alignment at H-elongata_contig130715:134..1564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig130715.2224.1 ID=mRNA_H-elongata_contig130715.2224.1|Name=mRNA_H-elongata_contig130715.2224.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1431bp|location=Sequence derived from alignment at H-elongata_contig130715:134..1564- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig130715:134..1564- >mRNA_H-elongata_contig130715.2224.1 ID=mRNA_H-elongata_contig130715.2224.1|Name=mRNA_H-elongata_contig130715.2224.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig130715:134..1564- (Himanthalia elongata Himel1 dioecious)back to top |