mRNA_H-elongata_contig12987.2181.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12987.2181.1
Unique NamemRNA_H-elongata_contig12987.2181.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: D7FPJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ3_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 4.630e-104
Identity = 164/178 (92.13%), Postives = 174/178 (97.75%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
            QNKAVEFSKLQICVDLFLF + Y+DV TLVNLPKFTAGQLFYYPAFNAQ +GVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQ+L+ASV+S+QAALLYTTSCGERRIRVHN+AIPVETV+QNVFDSV+IDVLCNILAKQALEV
Sbjct:  480 QNKAVEFSKLQICVDLFLFSSGYSDVATLVNLPKFTAGQLFYYPAFNAQSDGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVVSVQAALLYTTSCGERRIRVHNLAIPVETVVQNVFDSVSIDVLCNILAKQALEV 657          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A836CAX8_9STRA (Sec23/Sec24 trunk domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX8_9STRA)

HSP 1 Score: 288 bits (737), Expect = 3.990e-89
Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
            QNKA +FSKLQICVDLFL GAQY DV TL  LP  T GQLFYYP FN QR+GVK  AELTRVLTRATAFEAVMRVRATRGLR++NFYGNYFIRGTDLLALPNCTPDSVF VEF YDEQVL ASVISIQAALLYTTS GERRIRVHN+A+PV+TV Q +F+SV+ID LCN++AKQAL+V
Sbjct:  440 QNKAQDFSKLQICVDLFLCGAQYMDVATLFQLPSKTGGQLFYYPGFNVQRDGVKLQAELTRVLTRATAFEAVMRVRATRGLRMSNFYGNYFIRGTDLLALPNCTPDSVFGVEFAYDEQVLVASVISIQAALLYTTSTGERRIRVHNVALPVKTVCQEIFNSVSIDALCNLVAKQALDV 617          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A7S2V2R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2R8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.260e-82
Identity = 127/180 (70.56%), Postives = 152/180 (84.44%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEVIY 540
            + KA+EFS+ QICVDLFLF   YTDV TL  LPK+TAG+ ++YP F++QR+G KF  ELTRVLT+  AFEAVMRVRATRGLRITNFYGNYF+RGTDLLALPNCTPD+ F +EF Y+EQ+L+A +ISIQAALLYT+S GERRIRVHN+AIPV  V+Q V +SV IDV+ N+LAK ALEV +
Sbjct:   43 KTKAIEFSRYQICVDLFLFSEHYTDVATLSQLPKYTAGRCYHYPRFSSQRDGEKFVTELTRVLTQPIAFEAVMRVRATRGLRITNFYGNYFVRGTDLLALPNCTPDTCFGIEFAYEEQLLTAQIISIQAALLYTSSSGERRIRVHNLAIPVSQVIQEVVNSVAIDVVINVLAKSALEVAW 222          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A7S4D505_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D505_HETAK)

HSP 1 Score: 251 bits (641), Expect = 2.030e-76
Identity = 120/178 (67.42%), Postives = 150/178 (84.27%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
            + KAVEFS+LQI V+LFLF AQY D+  L +LPK+TAG+ +YYPAF   R+G + +AEL R LTR   FEAVMRVRATRGLRITNFYGNYFIRG+DLLALPNC+P+  +A+E  Y+EQ+++A VIS+QAALLYT+S GERRIRVHN+A+PV T++Q   +S+NIDVLCNI+AKQAL+V
Sbjct:  289 KTKAVEFSRLQITVELFLFAAQYADLAALQDLPKYTAGRTYYYPAFRPPRDGARLDAELARCLTRPVVFEAVMRVRATRGLRITNFYGNYFIRGSDLLALPNCSPEHAYALELAYEEQLMTAQVISVQAALLYTSSNGERRIRVHNLAVPVTTIIQEYINSINIDVLCNIMAKQALDV 466          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A812VPB2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VPB2_SYMMI)

HSP 1 Score: 228 bits (580), Expect = 1.470e-67
Identity = 112/177 (63.28%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALE 531
            +N A+EFS+LQICVD FLF  QYTDV T   L K+TAG  +YYP F   R+G KF AEL R LTRA+AFEAVMRVRATRGLRI NFYG++FIRGTDLLALPNCT DSV+ ++F YDE  LS + +++QAALLYT S GERRIRVH M IPV   +  +    +ID   NI AKQA++
Sbjct:  364 KNTAIEFSRLQICVDTFLFSGQYTDVATFSTLSKYTAGSTYYYPGFYGPRDGEKFEAELHRTLTRASAFEAVMRVRATRGLRIQNFYGSFFIRGTDLLALPNCTSDSVYTMDFAYDEPALSTTAVTVQAALLYTNSAGERRIRVHTMVIPVTQHLSEMLSLTDIDCAVNIAAKQAVD 540          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: M4BN79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN79_HYAAE)

HSP 1 Score: 210 bits (535), Expect = 4.020e-63
Identity = 100/178 (56.18%), Postives = 134/178 (75.28%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
            +  A++F + Q+ VDLFLF + YTD+ ++ +L K++AGQ++YYPAFNA+R+G KF+ EL   L R TA+EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C  DS FAVE  + + +L++S IS+QA LLYT S GERRIRVH + IPV  +   +F  V+ D LCNI+AK ALEV
Sbjct:   10 RTNAIDFCRQQVSVDLFLFSSMYTDIASMGSLSKYSAGQVYYYPAFNAKRDGEKFSKELAHCLVRETAWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVEITHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKNALEV 187          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: F0YAP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAP0_AURAN)

HSP 1 Score: 219 bits (559), Expect = 8.160e-63
Identity = 112/189 (59.26%), Postives = 140/189 (74.07%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV-IYVGVERERE 564
            + KAVEFS+LQICV+LF+    Y DV TL  LPK TAGQL++YP F A  +G K   EL R LTR T FEAVMRVR TRGLR+  F GNY+IRG DLLALPNCTP+SVF +E  +D+Q L+ASV SIQA+LLYTTS GERRIRVH M  PV   +  + +S ++D LCN++AK+A++V +  G+E  R+
Sbjct: 1238 ETKAVEFSRLQICVELFVAAHTYADVATLGLLPKITAGQLYFYPGFKASHDGEKLATELARALTRPTGFEAVMRVRCTRGLRVAAFRGNYYIRGHDLLALPNCTPESVFDLEIAHDDQPLTASVASIQASLLYTTSSGERRIRVHTMVAPVSGDVGAIAESASVDALCNVVAKRAVDVALKQGLEASRQ 1426          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A662XXV8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXV8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.320e-62
Identity = 98/177 (55.37%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALE 531
            +  A++F + Q+ VD+FLF + YTDV ++ +L K++AGQ++YYPAFNA+R+G KF+ EL   L R T++EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C  DS FAVE  + + +L++S IS+QA LLYT S GERRIRVH + IPV  +   +F  V+ D LCNI+AK ALE
Sbjct:    9 RTNAIDFCRQQVSVDMFLFSSMYTDVASIGSLSKYSAGQVYYYPAFNAERDGEKFSRELAHCLVRETSWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVELTHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKSALE 185          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: W7TF62_9STRA (Coatomer copii n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF62_9STRA)

HSP 1 Score: 215 bits (548), Expect = 6.320e-62
Identity = 111/183 (60.66%), Postives = 138/183 (75.41%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLF---GAQ--YTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV 534
            + KAVEFS++QI VDLF     G Q  + D+ +L  L KFT G LFYYP F  +++G K   E+ R+LTR T FEAVMRVRATRGL++T FYGNY+IRGTDLLALPNC+ +SVF VE  +DE  L+ASVI +QAALL+TTS GERRIRVH +A PV  V+Q V  SV++D LCN++AK+ LEV
Sbjct:  392 RTKAVEFSRVQISVDLFCVAPAGQQTPFMDLASLTALSKFTGGNLFYYPGFAMEKDGRKLEEEMGRILTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCSSESVFGVEMAHDEAFLTASVICVQAALLHTTSSGERRIRVHTVAAPVTAVLQEVIASVDVDTLCNLMAKRMLEV 574          
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Match: A0A024TUF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUF0_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.480e-61
Identity = 107/188 (56.91%), Postives = 139/188 (73.94%), Query Frame = 1
Query:    1 QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQREGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIPVETVMQNVFDSVNIDVLCNILAKQALEV-IYVGVERER 561
            +  A+EF + Q+ VD FLF  QYTD  +L  + K++AGQ+FYYP F A ++G KF AEL   LTR T +EAVMRVR T+G+R+ NFYGN F+RG DLLALPNC  D+ FA+E  + + +L+ASVISIQAALLYTTSCGERRIRV  +A+PV  +   VF SV++D +CN++AK ALEV +  G+E  R
Sbjct:  605 RKNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFYYPGFTAAKDGDKFRAELAHTLTRETGWEAVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQDALLTASVISIQAALLYTTSCGERRIRVLTVAVPVTKLFAEVFRSVDVDAICNMIAKNALEVALKTGLEPAR 792          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12987.2181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ3_ECTSI4.630e-10492.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAX8_9STRA3.990e-8981.46Sec23/Sec24 trunk domain-containing protein n=1 Ta... [more]
A0A7S2V2R8_9STRA1.260e-8270.56Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S4D505_HETAK2.030e-7667.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812VPB2_SYMMI1.470e-6763.28Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
M4BN79_HYAAE4.020e-6356.18Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0YAP0_AURAN8.160e-6359.26Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A662XXV8_9STRA3.320e-6255.37Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
W7TF62_9STRA6.320e-6260.66Coatomer copii n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A024TUF0_9STRA1.480e-6156.91Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12987contigH-elongata_contig12987:6658..8075 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.7
Seed ortholog evalue8.8e-88
Seed eggNOG ortholog2880.D7FPJ3
Preferred nameSEC24B
KEGG koko:K14007
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0019222,GO:0019882,GO:0019884,GO:0019886,GO:0022607,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0034613,GO:0034622,GO:0035459,GO:0042175,GO:0042277,GO:0042592,GO:0042632,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045714,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048475,GO:0048518,GO:0048522,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0055088,GO:0055092,GO:0060255,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070971,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0090110,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:1903530,GO:1903532,GO:1904951
EggNOG free text desc.ER to Golgi vesicle-mediated transport
EggNOG OGsCOG5028@1,KOG1985@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size564
Cds size564
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12987.2181.1prot_H-elongata_contig12987.2181.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12987 6658..8075 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929771.9467473-CDS-H-elongata_contig12987:6657..67891622929771.9467473-CDS-H-elongata_contig12987:6657..6789Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 6658..6789 +
1691679151.7103484-CDS-H-elongata_contig12987:6657..67891691679151.7103484-CDS-H-elongata_contig12987:6657..6789Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 6658..6789 +
1622929771.9658353-CDS-H-elongata_contig12987:7319..75711622929771.9658353-CDS-H-elongata_contig12987:7319..7571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 7320..7571 +
1691679151.7242804-CDS-H-elongata_contig12987:7319..75711691679151.7242804-CDS-H-elongata_contig12987:7319..7571Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 7320..7571 +
1622929771.980585-CDS-H-elongata_contig12987:7895..80751622929771.980585-CDS-H-elongata_contig12987:7895..8075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 7896..8075 +
1691679151.735117-CDS-H-elongata_contig12987:7895..80751691679151.735117-CDS-H-elongata_contig12987:7895..8075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12987 7896..8075 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12987.2181.1

>prot_H-elongata_contig12987.2181.1 ID=prot_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
QNKAVEFSKLQICVDLFLFGAQYTDVGTLVNLPKFTAGQLFYYPAFNAQR
EGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLAL
PNCTPDSVFAVEFGYDEQVLSASVISIQAALLYTTSCGERRIRVHNMAIP
VETVMQNVFDSVNIDVLCNILAKQALEVIYVGVERERE
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mRNA from alignment at H-elongata_contig12987:6658..8075+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12987.2181.1 ID=mRNA_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1418bp|location=Sequence derived from alignment at H-elongata_contig12987:6658..8075+ (Himanthalia elongata Himel1 dioecious)
CAGAACAAAGCGGTGGAATTCAGCAAGCTGCAGATTTGCGTGGATCTGTT TCTCTTCGGTGCGCAGTACACGGACGTGGGCACCCTCGTTAACCTTCCAA AGTTCACCGCCGGGCAGCTGTTTTATTATCCGGTTAGTGAAAAGATTAAA TTCCAAACGTGATGATGGATTTTTAAGAAAAAAATAAATAGAAAGCCCAA TCTTCGAGTAACGAACTCTTGGGCACTATTAATAATGGTATGGTATGGTA TGGTAGAGCTATTAATAATGAATAGCTGCATAGCCTACAGTACTCGAGAC AAGTTAGGTTCCCGAGTGCCCCTCCCCCCGTCCCGTCCCGTCCCTCGGTG TCTCATTATTAGCCGGTATTATACCATATTAGAGTTAGGCAGTTAAGGTT AGTAAAGTATAGTGTGGTTTTTATCCTCCCCCCCTATAAATAAATAACGT TATAGCGGTGGCTGCGTAGGATAACTTTTCCCTTGTGGCGTCCAAGTTCT CGGCTCCCTCCCGTCCCCCGTCCCCCATCCCCCCTTAGCCTATAATTTTC AATGTGTAGCCTAAACTTACACGGGTTAATAACGTCCTTCGCCTGTTGTG CCCATATGCCCCCTCCTCCCCTTCCATAAACACGCACGCACTCACGCATA AAAACGTGGCAGGCGTTCAATGCGCAGCGCGAGGGGGTAAAGTTCAACGC GGAGCTGACGCGGGTCTTGACAAGGGCCACGGCGTTCGAGGCGGTCATGC GGGTGCGGGCGACCCGAGGCCTGCGCATCACAAACTTTTACGGGAACTAC TTCATCCGCGGCACTGACCTGCTCGCGCTGCCCAACTGCACCCCGGACAG CGTGTTCGCGGTGGAGTTCGGGTACGACGAGCAAGTGCTGTCGGCGTCGG TGATCTCCATACAGGTGCGGTGCGATGTCTGTGTTTATGTTTGTCTATTC ACAGACAAAGCATACATTGCACACAATGAAGTGGATCATGTGTGGATCAT TGGCGTTTATTCTGGGTGTTCTCCTTCGGACACCTCGCGGCTGAGTGGCA GTGGGTTCCCTCACGTACCGCCTCTTTAGAACTCCCGTCAGTGCATACAT GAATCATACGTGGGTCGAGTGTCTACTAGGGTCTGCCGTCGTCAAAGCTT ACCTCGACCCCGCCCCGCCTTGCCCCTCCTCATCTTTCCCTTTCCTTGCT CTTCTTGTCTGTATTTGTATTTTCCCGTCCCTCCTCAGGCGGCGTTGCTG TACACCACGTCCTGCGGGGAACGGCGCATCCGCGTCCATAATATGGCGAT TCCCGTCGAAACCGTGATGCAGAACGTGTTTGACAGCGTGAACATCGACG TCCTGTGCAACATTCTCGCCAAGCAGGCACTAGAGGTGATTTATGTTGGG GTAGAAAGAGAGAGAGAG
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Coding sequence (CDS) from alignment at H-elongata_contig12987:6658..8075+

>mRNA_H-elongata_contig12987.2181.1 ID=mRNA_H-elongata_contig12987.2181.1|Name=mRNA_H-elongata_contig12987.2181.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1128bp|location=Sequence derived from alignment at H-elongata_contig12987:6658..8075+ (Himanthalia elongata Himel1 dioecious)
CAGAACAAAGCGGTGGAATTCAGCAAGCTGCAGATTTGCGTGGATCTGTT
TCTCTTCGGTGCGCAGTACACGGACGTGGGCACCCTCGTTAACCTTCCAA
AGTTCACCGCCGGGCAGCTGTTTTATTATCCGCAGAACAAAGCGGTGGAA
TTCAGCAAGCTGCAGATTTGCGTGGATCTGTTTCTCTTCGGTGCGCAGTA
CACGGACGTGGGCACCCTCGTTAACCTTCCAAAGTTCACCGCCGGGCAGC
TGTTTTATTATCCGGCGTTCAATGCGCAGCGCGAGGGGGTAAAGTTCAAC
GCGGAGCTGACGCGGGTCTTGACAAGGGCCACGGCGTTCGAGGCGGTCAT
GCGGGTGCGGGCGACCCGAGGCCTGCGCATCACAAACTTTTACGGGAACT
ACTTCATCCGCGGCACTGACCTGCTCGCGCTGCCCAACTGCACCCCGGAC
AGCGTGTTCGCGGTGGAGTTCGGGTACGACGAGCAAGTGCTGTCGGCGTC
GGTGATCTCCATACAGGCGTTCAATGCGCAGCGCGAGGGGGTAAAGTTCA
ACGCGGAGCTGACGCGGGTCTTGACAAGGGCCACGGCGTTCGAGGCGGTC
ATGCGGGTGCGGGCGACCCGAGGCCTGCGCATCACAAACTTTTACGGGAA
CTACTTCATCCGCGGCACTGACCTGCTCGCGCTGCCCAACTGCACCCCGG
ACAGCGTGTTCGCGGTGGAGTTCGGGTACGACGAGCAAGTGCTGTCGGCG
TCGGTGATCTCCATACAGGCGGCGTTGCTGTACACCACGTCCTGCGGGGA
ACGGCGCATCCGCGTCCATAATATGGCGATTCCCGTCGAAACCGTGATGC
AGAACGTGTTTGACAGCGTGAACATCGACGTCCTGTGCAACATTCTCGCC
AAGCAGGCACTAGAGGTGATTTATGTTGGGGTAGAAAGAGAGAGAGAGGC
GGCGTTGCTGTACACCACGTCCTGCGGGGAACGGCGCATCCGCGTCCATA
ATATGGCGATTCCCGTCGAAACCGTGATGCAGAACGTGTTTGACAGCGTG
AACATCGACGTCCTGTGCAACATTCTCGCCAAGCAGGCACTAGAGGTGAT
TTATGTTGGGGTAGAAAGAGAGAGAGAG
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