mRNA_H-elongata_contig12977.2172.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: D7G8H9_ECTSI (VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H9_ECTSI) HSP 1 Score: 365 bits (936), Expect = 5.180e-113 Identity = 206/329 (62.61%), Postives = 244/329 (74.16%), Query Frame = 1
Query: 214 MSTGTYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTS------TSLDGNQRYISLNSGGVAFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESD-AIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGN 1179
M TG +A+YA GSGT A+TFIYTV+ GD T+ LDAWDA +G+LSALDVRYAGNFGYLRR ST PTTD DLTLP PG GSLS + +DT V+ V++++TSLADG YGVG++I LLV FTS T+L+ + I LNSGG A YN GNGT+ L+FLYTVGEGES+ LD AVV SDVT+TTT++L ++ AIFD E+PAV+TLPKPG G S NI+IDT PPLV EVTS L+DG YGPG VEI +KY V V G PRL LDLGD DG A + ++ TN+TL FVYVVREGDSTADLDYT PFALE+ P+N T N
Sbjct: 72 MDTGKFADYAFGSGTRAITFIYTVQEGDETEALDAWDAPAHGELSALDVRYAGNFGYLRRTSTWPTTDSDLTLPEPGSSGSLSGGNVVVVDTKVARVIAVNTSLADGVYGVGEEIPLLVTFTSAVSVNSTALNESLPSILLNSGGTALYNGGNGTAVLEFLYTVGEGESSGGLDTAVVGSDVTATTTILLPAEGAIFDAALEAPAVVTLPKPG-GES-----NIIIDTEPPLVLEVTSTLADGYYGPGHEVEILIKYTAPVVVYGVPRLRLDLGDADGYASFEALKDGTNNTLVFVYVVREGDSTADLDYTSPFALEL--PQNDTTALN 392
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A0A1C0VUR0_9CYAN (DUF4347 domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium USR001 TaxID=1880991 RepID=A0A1C0VUR0_9CYAN) HSP 1 Score: 192 bits (487), Expect = 4.100e-50 Identity = 140/375 (37.33%), Postives = 199/375 (53.07%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTG---TYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGVAF---YNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFAL 1140
SLGAN+ +VI T P++ ++++T G Y VG I + + F++ V NV+ P+L ++TG T Y+SGSG+ +TF YTV +GD+T LD +AL++ N G ++ A+T+ T LTLP P SL A ++ +DTT ++ SI+++L DGTY VGQ I + V FT ++L +GG Y GNGT+ L F YTV G ++ DLD ST L L I D + A +TLP P SLG + +VIDT P + +TS L+DG Y GQ++ I V + V V GTP+L L G Y + G+ +TL F Y V GD++ DLDY AL
Sbjct: 1009 SLGANKALVIDTTAPTITSITSTLT--DGTYSVGQVIPITVTFTENV----NVSGTPQLTLATGGAGTPVNYSSGSGSNTLTFNYTVAAGDTTTDLDYLST------AALNL----NGGTIKDAATNNAT---LTLPAPAAANSLGANKALVIDTTAPTITSITSTLTDGTYSVGQVIPITVTFTENVNVTGTPQLTLATGGAGTPVNYTSGNGTNTLTFEYTVAAGNTSTDLDYL-------STAALALNGGTIKDAATNN-ATLTLPAPAAANSLGANKALVIDTTAPTITSITSTLTDGTYSVGQIIPITVTFTENVNVTGTPQLTLATGGAGTPVNY--ISGNGTNTLTFEYTVAAGDTSTDLDYLSTAAL 1354
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: UPI00187D56BA (DUF4347 domain-containing protein n=1 Tax=Candidatus Magnetaquicoccus inordinatus TaxID=2496818 RepID=UPI00187D56BA) HSP 1 Score: 189 bits (479), Expect = 4.960e-49 Identity = 146/369 (39.57%), Postives = 198/369 (53.66%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTY---AEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGV---AFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDY 1122
SLG N+ IVI T PSV ++S T G Y VGD I V + FS+ V ++ P L + TGT A + SGSG++ +TF YTV++GDST LD + A T L N G ++ A+ + T LTL TPG SL +I +DT +V S+S+S A+GTY GQ I + V F+ I+L +G Y G+G++AL F YTV G+ T+DLD + S+T L L S +I D + A +TL PG SLG+ +NI++ AP V V++ +DG Y G + + V + +TV GTP L L+ G ND NA Y G T TL F Y V+ GDST DLDY
Sbjct: 1393 SLGDNKAIVIDTTAPSVSSVSATTA--DGSYKVGDVIAVTVTFSEAV-SVVTTGGTPTLTLETGTTDRNASFVSGSGSDTLTFHYTVQAGDSTSDLD-YTATTALAL---------NGGTIKDAAGNNAT---LTLATPGAANSLGNNKAILIDTAAPTVSSVSSSTANGTYYAGQSINVTVNFSEAVTVTGTPQITLETGSTDRTVNYVSGSGSAALLFTYTVQSGDITSDLDYS-------SSTALALNSGSIKD-SAGNDATLTLAAPGAANSLGNAKNIIVALAP-SVSSVSASSADGSYKAGDTINVTVTFTEAITVTGTPYLTLETGTNDRNATYSSGSGST--TLTFAYSVQAGDSTTDLDY 1734
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: UPI0011428B41 (DUF4347 domain-containing protein n=1 Tax=Magnetospirillum sp. 15-1 TaxID=1979370 RepID=UPI0011428B41) HSP 1 Score: 180 bits (456), Expect = 5.160e-46 Identity = 144/392 (36.73%), Postives = 204/392 (52.04%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTY---AEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGV---AFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGNSSAI 1191
SLG + IVI P+V ++++ G Y VGD I V++ FS+ V VT P+L + TGT +YASGSGT ++TF YTV++GD+T LD + G L A N G ++ A+ + D LTL +PG SL +I +D V +V ++++S ADG+Y VG I + V F+ ++L +G Y G+GTS+L F YTV G++TADLD ST L L I D A +TL PG SLG+ + IVID P V VTS ++G Y G + + V ++ VTV GTP+L L+ G D +Y G + +L F Y V+ GD+TADLDY AL ++ A GN + +
Sbjct: 629 SLGNAKAIVIDGVAPTVSGVTSSTA--DGSYKVGDTISVQVNFSESV----TVTGTPQLTLETGTTDRTVDYASGSGTNSLTFTYTVQAGDTTADLDYI---STGAL-------ALNGGTIKDAAGN---DATLTLASPGAANSLGNAKAIVVDGVVPTVSAVTSSTADGSYKVGDTISVQVDFSENVTVTGTPQLTLETGTTDRTINYASGSGTSSLTFTYTVQAGDTTADLDYI-------STGALALNGGTIKDAAGND-ATLTLASPGAANSLGNAKAIVIDGVVPTVSGVTSSTANGSYKVGDTISVQVNFSESVTVTGTPQLTLETGTTDRTVDY--TSGSGSSSLTFTYTVQAGDTTADLDYISTSALVLNGGSIKDAVGNDATL 991
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: UPI00069F4C71 (Ig-like domain-containing protein n=1 Tax=Caenimonas sp. SL110 TaxID=1450524 RepID=UPI00069F4C71) HSP 1 Score: 177 bits (448), Expect = 5.000e-45 Identity = 141/392 (35.97%), Postives = 200/392 (51.02%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTG---TYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGV---AFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGNSSAI 1191
SLG N + VI P+V +++T P G Y GD I +++ F++ V VT P+L + TG +YASGSGT+ +TF YTV++GD++ LD A SAL A N G + A+ + L LP PG SL A SI +DT V +++++ +GTY +G I + V F+ ++L +GG Y G+GT L F YTV G++ ADLD T L L + A+ D AV+TLP PG SLG R++VID P V V+S + G Y G + I V++ V V GTP+L L+ G D +Y G DTL F Y V+ GD++ DLDY AL ++ + GNS+A+
Sbjct: 382 SLGDNCDYVIDGIQPTVAGVASTSP--AGSYKAGDTISIQITFTEAVF----VTGTPQLTLETGGTDRAIDYASGSGTDTLTFTYTVQAGDTSLDLDYLSA------SAL----AFNGGAIEDAAGNSAV---LALPEPGAANSLGANESIVIDTGAPVVNAVNSTTDNGTYKIGDVISVQVSFSEAVTVSGTPQLTLETGGTDRTVDYASGSGTDTLTFTYTVQAGDTAADLDYI-------GTAALSLNAGAVTDAAGND-AVLTLPSPGAAGSLGANRDLVIDGVQPTVAGVSSTSAAGTYRTGDTISIQVQFTEGVVVTGTPQLTLESGSTDRTVDY--ASGSGTDTLTFTYTVQAGDASLDLDYLGTSALSLNGGTIADDAGNSAAL 744
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A0A3N7D3G3_9SPHI (Uncharacterized protein n=1 Tax=Pedobacter sp. KBW06 TaxID=2153359 RepID=A0A3N7D3G3_9SPHI) HSP 1 Score: 170 bits (430), Expect = 1.430e-42 Identity = 134/384 (34.90%), Postives = 187/384 (48.70%), Query Frame = 1
Query: 40 GANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGVAFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGNSSAI 1191
G N + T+V SV + + G Y +GD I + + FS + NVT P L ++TG A Y+ G+GT +TF YTV SG ST LD + + T L+ ++ AG+ TD LTL PG SL +I +D ++ S +++ A+G Y G I + + FT ++LNSG Y G+GTS L F YTVG +++ADLD STT L L I D S A +TL PG SLG +NIVID PLV V S L +G Y ++ + + ++ +VTV GTP L L+ G G A Y + G + L F Y V S ADLD AL ++ A GN++ +
Sbjct: 256 GVNPIFQLGTNVSSVTSSTA-----NGTYKIGDLITINVTFS----TIVNVTGTPLLSLNTGANASYSDGTGTNTLTFNYTVASGQSTPDLD-YASTTALSLNGGTIKDAGS------------TDATLTLAAPGAANSLGNNKAIVIDGITPTIASANSTTANGAYKAGDLININLNFTEAVTVTGTPQLALNSGATVNYTSGSGTSTLTFNYTVGPTDASADLDYI-------STTALSLNGGTIKDAAGNS-ATLTLAAPGAANSLGANKNIVIDNTAPLVSSVNSSLPNGTYKINDVIPVTINFSEVVTVTGTPTLGLNSG---GTASY--VSGSGSSALVFNYTVALNQSIADLDQASTTALALAGGTIKDAAGNNATL 604
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A0A3S3QSX8_9FLAO (T9SS type A sorting domain-containing protein n=1 Tax=Flavobacterium cerinum TaxID=2502784 RepID=A0A3S3QSX8_9FLAO) HSP 1 Score: 169 bits (429), Expect = 1.950e-42 Identity = 143/385 (37.14%), Postives = 196/385 (50.91%), Query Frame = 1
Query: 40 GANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFT-STSLDGNQRYISLNSGGVAFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGNSSAI 1191
G N + T+V +V STT G Y GD I V + FS + NVT P L ++TG A Y+ G+GT +TF YTV SG S+ LD T+ AL N G ++ A++ TD LTL TPG SL +I +DT +V S++++ +GTY G I + + F+ + ++ G R I+LNSG Y +G+GTS L F YTVG G+++ADLD + + L AI D S A + LP PG SLG +NI+IDTA P V V S L +G Y G ++ I V ++ VTV GTP L L+ G G A Y G T L F Y V + ADLD AL ++ GN++ +
Sbjct: 271 GVNPIFQLGTNVSNVT--STTA---NGTYKTGDVIVVNVTFS----TIVNVTGTPLLSLNTGANASYSGGTGTNTLTFDYTVASGQSSADLD----YTSTTALAL------NGGTIKDAAS---TDATLTLATPGAANSLGNNKAIVIDTIAPTVTSVNSTTPNGTYKAGDLINININFSEAVTVTGTPR-IALNSGVAVNYVNGSGTSTLNFNYTVGTGQNSADLDYFTITGPID------LSGAAIKDAAGNS-ATLILPAPGAPNSLGGNKNIIIDTASPEVSSVNSTLPNGTYKIGDLLPITVNFSETVTVTGTPTLSLNSG---GTASYVSGSGTT--ALIFNYTVGLNQAVADLDQASTTALVLAGGTIKDVVGNNATL 620
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A0A2E4BCV6_9FLAO (Cadherin domain-containing protein (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E4BCV6_9FLAO) HSP 1 Score: 164 bits (416), Expect = 1.040e-40 Identity = 128/370 (34.59%), Postives = 194/370 (52.43%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGT---YAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSG---GVAFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYT 1125
SLGAN++I+I T P+VV++++ K G Y V D I + + FS+ V VT P+L + TGT YASGSG+ A+ F YTV SG ++ LD SAL + N G + A+ + + +LTL PG SL A +I +DT ++ S++++ ++GTY +G +I + + F+ ++L +G V Y+ G+G + L F YTV EG ++D T+ L L + I D+ S AV+TL PG+ SLG +ID P+V V++ S+ Y G + I V ++ +V V GTP+L L+ G +D Y G T TL F Y + EG ++ DLDYT
Sbjct: 1510 SLGANKSIIIDTATPTVVSVNSDK--SNGIYNVEDIIGITVNFSEAVV----VTGTPQLTLETGTNDAVVNYASGSGSNALLFYYTVASGHNSADLDY------ASTSALGL----NGGSINDAAGNTS---NLTLAAPGQTNSLGANKAIIIDTFSPTISSVTSTSSNGTYNIGDEINISITFSEVVNVXGSPQLTLETGTSDAVVNYSSGSGGAVLTFTYTVAEGHLSSDXXYI-------GTSXLALNNGTIKDLSGNS-AVLTLSSPGSSGSLGANAAXIIDGVVPVVSSVSTTTSNNSYKIGDAIAINVVFSEVVNVSGTPQLTLETGTSDAVVNYSSGSGGT--TLTFXYTISEGHTSGDLDYT 1850
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A0A4U1GFA6_9SPHI (T9SS type B sorting domain-containing protein n=2 Tax=Pedobacter hiemivivus TaxID=2530454 RepID=A0A4U1GFA6_9SPHI) HSP 1 Score: 164 bits (415), Expect = 1.330e-40 Identity = 133/380 (35.00%), Postives = 181/380 (47.63%), Query Frame = 1
Query: 40 GANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTYAEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYISLNSGGVAFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLVTVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGN 1179
G N + T+V V + + G Y +GD I + + FS V NVT P L ++TG Y+ G+GT +TF YT+ SG S+ LD + A T L+ ++ GN TD LTL PG SL +I +D V +V S ++S A+G Y G I + + F+ T ++LNSG Y+ G+GTS L F YTV +++ADLD TST L L + D A +TL PG SL +NIVID P+V V S L++G Y G ++ + V ++ VTV GTP L L+ G G A Y G T L F Y V S ADLD AL ++ A GN
Sbjct: 256 GTNPIFQLGTNVSGVTSSTA-----NGTYKIGDVIAINVTFSTVV----NVTGTPTLSLNTGATVNYSGGTGTNTLTFNYTIASGQSSADLD-YSATTALSLNGGTIKDVGN------------TDATLTLAAPGAANSLGNNKAIVVDGIVPTVTSANSSTANGAYKAGDAIVINLNFSETITVTGTPQLALNSGTTVNYSSGSGTSTLTFNYTVQPTDASADLD-------YTSTAALSLNGGTLKDAAGND-ATLTLAAPGAANSLAANKNIVIDNTVPVVSSVNSSLANGTYKIGDLIPVTVDFSEAVTVTGTPTLSLNSG---GTASYASGSGST--ALVFNYTVALNQSIADLDQASTTALSLAGGTIKDAAGN 600
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Match: A4CY56_SYNPV (VCBS protein n=1 Tax=Synechococcus sp. (strain WH7805) TaxID=59931 RepID=A4CY56_SYNPV) HSP 1 Score: 162 bits (411), Expect = 4.670e-40 Identity = 138/398 (34.67%), Postives = 209/398 (52.51%), Query Frame = 1
Query: 34 SLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVKLWFSKPVEALANVTKAPRLRMSTGTY---AEYASGSGTEAMTFIYTVKSGDSTDTLDAWDAQTNGKLSALDVRYAGNFGYLRRASTSPTTDVDLTLPTPGFQGSLSAFVSIKLDTTVSSVVSISTSLADGTYGVGQDIFLLVIFTSTSLDGNQRYI---SLNSGGV---AFYNDGNGTSALQFLYTVGEGESTADLDVAVVASDVTSTTTLVLESDAIFDIEHESPAVMTLPKPGTGRSLGDKRNIVIDTAPPLVEEVTSPLSDGQYGPGQMVEIFVKYNTLV---TVIGTPRLWLDLGDNDGNAEYHGMRGDTNDTLRFVYVVREGDSTADLDYTDPFALEVSVPENSTATGNSSAI 1191
SLG N +VI + P+V + +T YG+GD I++ + FS+ V + P L++ TGT A + SGSGT +TF YTV+ GD++ LD + +AL++ N G + A+ + + LTL PG GSL ++ +DTT +V +S++ AD +YG+G I L V F+ + I L +G + A + G+GT+ L F YTV EG+++ADLD S+T L L +I D + A++TL PG SLGD +VIDT P V V+S +D YG G + + V ++ V T +G P L L+ G D A + + G +TL F Y V+EGD++ADLD ALE++ + A GN++ +
Sbjct: 2036 SLGDNAALVIDGNQPTVTGVDSTNADVS--YGIGDFINLTVSFSEAV-VVDTTVGIPTLQLETGTIDRKAIFVSGSGTNTLTFQYTVQEGDTSADLDQLSS------TALEL----NGGSIADAAGN---NAILTLAAPGDTGSLGDNAALVIDTTRPTVTGVSSTNADVSYGIGDFINLTVSFSEAVVVDTTVGIPTLQLETGTIDRKAIFVSGSGTNTLTFQYTVQEGDTSADLDQL-------SSTALELNGGSIADAAGNN-AILTLAAPGDTGSLGDNAALVIDTTRPTVTGVSSTNADVSYGIGDFINLTVSFSEAVVVDTTVGIPTLQLETGTIDRKAIF--VSGSGTNTLTFQYTVQEGDTSADLDQLSSTALELNGGSIADAAGNNAIL 2407 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12977.2172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12977.2172.1 >prot_H-elongata_contig12977.2172.1 ID=prot_H-elongata_contig12977.2172.1|Name=mRNA_H-elongata_contig12977.2172.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp QPGSCATFKGCSLGANRNIVISTDVPSVVNMSTTKPPDRGPYGVGDEIDVback to top mRNA from alignment at H-elongata_contig12977:4423..8062+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12977.2172.1 ID=mRNA_H-elongata_contig12977.2172.1|Name=mRNA_H-elongata_contig12977.2172.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3640bp|location=Sequence derived from alignment at H-elongata_contig12977:4423..8062+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12977:4423..8062+ >mRNA_H-elongata_contig12977.2172.1 ID=mRNA_H-elongata_contig12977.2172.1|Name=mRNA_H-elongata_contig12977.2172.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2388bp|location=Sequence derived from alignment at H-elongata_contig12977:4423..8062+ (Himanthalia elongata Himel1 dioecious)back to top |