mRNA_H-elongata_contig129493.2155.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: D7FXW6_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW6_ECTSI) HSP 1 Score: 147 bits (372), Expect = 6.510e-39 Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPLQN 288
KT L QL LGL+KAD GE MFQGRPL EWET AYRERVAW+SQV+ RF LTAGENIGAG P+ FSNR LW RAA +SGA+ AIESLP+GYDT L++
Sbjct: 984 KTALLQLALGLMKADKGEAMFQGRPLQEWETGAYRERVAWLSQVSGRFGLTAGENIGAGDPSEFSNRELWARAAGLSGANTAIESLPLGYDTLLED 1079
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A6H5KVL8_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL8_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 3.730e-13 Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVA 135
KT L QL LGL+KAD GE MFQGRPL EWET AYRERVAW+SQ +
Sbjct: 821 KTALLQLALGLMKADEGEAMFQGRPLQEWETGAYRERVAWLSQAS 865
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: UPI001FD53501 (ABC transporter ATP-binding protein/permease n=1 Tax=Caballeronia sp. TF1N1 TaxID=2878153 RepID=UPI001FD53501) HSP 1 Score: 71.6 bits (174), Expect = 3.180e-12 Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
KT L +L+ L AG ++ G L EW+ + R R+ I Q R+ AGEN+G G AFS+R W AA A+A IE + GY+T L
Sbjct: 391 KTTLIKLLTRLYTPSAGRILLDGSDLQEWDEYTLRRRIGVIFQDFIRYQFKAGENLGVGDIEAFSDRTRWSEAAQKGMAAAFIEQMENGYETQL 484
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A1H1H7X5_9BURK (ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily C n=1 Tax=Paraburkholderia fungorum TaxID=134537 RepID=A0A1H1H7X5_9BURK) HSP 1 Score: 70.5 bits (171), Expect = 8.080e-12 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
KT L +L+ L +G ++ G L EW+ +A R R+ I Q R+ AGEN+G G AFS+R W AA A+A IE + GY+T L
Sbjct: 393 KTTLIKLLTRLYTPSSGRILLDGSDLQEWDEYALRRRIGVIFQDFIRYQFKAGENLGVGDIEAFSDRNRWTEAATKGMAAAFIERMENGYETQL 486
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: UPI00158B54C2 (ABC transporter ATP-binding protein/permease n=1 Tax=Microbacterium sp. Marseille-Q2854 TaxID=2736605 RepID=UPI00158B54C2) HSP 1 Score: 66.6 bits (161), Expect = 1.810e-10 Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
K+ L +LV GL + GE+ + G P+ + R A I Q R+A+ A NI G P+ ++ ERAA+ SGA+AAI+SLP GYDT L
Sbjct: 395 KSTLAKLVAGLYEPSTGEIRWDGMPVTPATSSTVRASTAVIFQDFVRYAVDARSNIAFGRPDVEVDQAEVERAAEASGAAAAIDSLPDGYDTTL 488
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A7Y2BJA2_9DELT (ABC transporter ATP-binding protein n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A7Y2BJA2_9DELT) HSP 1 Score: 65.5 bits (158), Expect = 4.600e-10 Identity = 36/94 (38.30%), Postives = 47/94 (50.00%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
KT L +L+ L + G + G L+ W R RV I Q R+ L AGEN+G G FS+ W+ AA+ A IE LP GY+T L
Sbjct: 398 KTTLIKLLTRLYQPTEGRITLDGLELNAWSLDVLRNRVGVIFQDFVRYQLVAGENVGVGDAQGFSDPERWQTAAEKGMAHEFIERLPSGYETQL 491
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A5P9P0P4_9EURY (ATP-binding cassette domain-containing protein n=1 Tax=Natronorubrum aibiense TaxID=348826 RepID=A0A5P9P0P4_9EURY) HSP 1 Score: 64.3 bits (155), Expect = 1.170e-9 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPLQNEG 294
K+ + L+ L D GE+ G P+DE++T A+R R+A++ Q F T EN+ G+P+A R E A DI+ + ++ LP GYDT L ++G
Sbjct: 400 KSTIAALLARLYAPDDGEITADGTPIDEFDTAAWRSRIAFVRQDPYIFNETLLENVTVGNPDA--TRAAVEEACDIAQVTEFLDELPDGYDTELGDDG 495
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A7V7ZFS8_9CHLR (Thiol reductant ABC exporter subunit CydD n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V7ZFS8_9CHLR) HSP 1 Score: 63.9 bits (154), Expect = 1.590e-9 Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPLQNEG 294
K+ L L+L + DAG+++ G P+D+++T A+R +A++ Q F+ T ENI G P A + + AA ++ A I +LP GYDTPL +G
Sbjct: 378 KSTLASLLLRFAQPDAGQILADGVPIDQFDTAAWRGCIAYVPQRPHLFSGTVLENIRLGRPAATMDEVV--AAAQVADAHRFIAALPQGYDTPLGEDG 473
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A3D1SLH8_9CHLR (ABC transporter domain-containing protein n=1 Tax=Ktedonobacter sp. TaxID=1932716 RepID=A0A3D1SLH8_9CHLR) HSP 1 Score: 63.2 bits (152), Expect = 2.360e-9 Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
KT + +L+ L D G++ GR + E++ RE V I Q + L A ENIG G N L + AA SGA AAIE LP GY+T L
Sbjct: 118 KTTIVKLLTRLYDPDEGDIYIGGRNIKEYDLKELREEVGVIFQDYVTYHLNARENIGVGRVAEIDNLSLVDTAAQKSGAHAAIEKLPAGYETML 211
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Match: A0A352Y0D1_9CHLR (Multidrug ABC transporter permease n=1 Tax=Ktedonobacter sp. TaxID=1932716 RepID=A0A352Y0D1_9CHLR) HSP 1 Score: 63.2 bits (152), Expect = 2.980e-9 Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 1
Query: 1 KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALTAGENIGAGHPNAFSNRPLWERAADISGASAAIESLPMGYDTPL 282
KT + +L+ L D G++ GR + E++ RE V I Q + L A ENIG G N L + AA SGA AAIE LP GY+T L
Sbjct: 422 KTTIVKLLTRLYDPDEGDIYIGGRNIKEYDLKELREEVGVIFQDYVTYHLNARENIGVGRVAEIDNLSLVDTAAQKSGAHAAIEKLPAGYETML 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129493.2155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig129493.2155.1 >prot_H-elongata_contig129493.2155.1 ID=prot_H-elongata_contig129493.2155.1|Name=mRNA_H-elongata_contig129493.2155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp KTCLFQLVLGLVKADAGELMFQGRPLDEWETFAYRERVAWISQVAARFALback to top mRNA from alignment at H-elongata_contig129493:739..1675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig129493.2155.1 ID=mRNA_H-elongata_contig129493.2155.1|Name=mRNA_H-elongata_contig129493.2155.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=937bp|location=Sequence derived from alignment at H-elongata_contig129493:739..1675- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig129493:739..1675- >mRNA_H-elongata_contig129493.2155.1 ID=mRNA_H-elongata_contig129493.2155.1|Name=mRNA_H-elongata_contig129493.2155.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig129493:739..1675- (Himanthalia elongata Himel1 dioecious)back to top |