mRNA_H-elongata_contig12938.2152.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: D7FGT7_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT7_ECTSI) HSP 1 Score: 572 bits (1473), Expect = 1.050e-194 Identity = 339/550 (61.64%), Postives = 380/550 (69.09%), Query Frame = 1
Query: 1 PAIVHRRFLVLEVTYASVRTETFSRGKMLMSIEQV-----PHGWTAVEEDDTDREDASPMSHAPAGSSGVGAGQ-EQCEISLLGDWYDCDVEPGDVVHVLFPPSEADDDDPRAG-----DETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAK---------------PNANARN-------------------GGFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRN-EGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQV 1512
PA+VHRRFLVLEVTY S R R K+LM++EQ P +A+ ++ PA SG GAG +Q +I+LLGDWYDC+VEPGD VHVLFP A +E +SR +VVDNASGRL+VVHPDILVSPTKVA+TV CARKAVLQSRLASDASKSKAAV+GNLKHELFETSLL A G RG LT Q M +LVDRIV+SQLEALYGA DED ARGELL+VSG IL WH +FL + P++ GG A+L SD A V+VSRVLATEDDVWSPVLGLKGIMDATVEA V+PLV G LVMPVEVKTGKR GEA HRAQVMLYTLLLRMRYG++ASTSGLLVYT+A+GL TELVSP AAE+RAL+LARNR A+GMA+IGRVGLVG + +G LPPVIRR R+CGMCFQNSECMLYHRA EGGD +SSGLE G FDSKVGHLSEAHLAFF+ WDRTIDLEAKIGEQV
Sbjct: 80 PALVHRRFLVLEVTYVSARNGRGCREKVLMALEQQDSQEDPXXXXXXXXXXXXXGEAA-TANLPADDSGEGAGMAQQRKITLLGDWYDCEVEPGDGVHVLFPMPAAXXXXXXXXXXXXMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAAXXXXXXXXXXGWQGQG-----RGGGAPPLLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXGLRRSPHSXXXXXXXXXXXXXXXXXXXXXXXGGMASLTSDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGGGGAPSLVMPVEVKTGKRKGEANSTHRAQVMLYTLLLRMRYGHDASTSGLLVYTAADGLRTELVSPVAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGDADSSGLEPGVFDSKVGHLSEAHLAFFSRWDRTIDLEAKIGEQV 623
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE) HSP 1 Score: 492 bits (1267), Expect = 3.620e-153 Identity = 311/535 (58.13%), Postives = 352/535 (65.79%), Query Frame = 1
Query: 1 PAIVHRRFLVLEVTYASVRTETFSRGKMLMSIEQVPHGWTAVEEDDT----------DREDASPMSHAPAGSSGVGAGQ-EQCEISLLGDWYDCDVEPGDVVHVLFP-PSEADDDDPRAG----DETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNAN----------------ARNG-----------------------GFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVR--ATGGRPL-VMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRN-EGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKV 1428
PA+VHRRFLVLEVTY S R R K+LM++EQ E+ DT +A+ + + PA G GAG +Q +I+LLGDWYDC+VEPGD VHVLFP P+ +E ++R +VVDNASGRL+VVHPDILVSPTKVA+TV CARKAVLQSRLASDASKSKAAV+GNLKHELFETSLL A LT Q M +LVDRIV+SQLEALYGA DED ARGELL+VSG IL WH +FL + + A +G L SD A V+V RVLATEDDVWSPVLGLKGIMDATVEA V+PLV GG PL VMPVEVKTGKRIGEA HRAQVMLYTLLLRMRYG +AST GLLVYT+A+GLHTELVSPAAAE+RAL+LARNR A+GMA+IGRVGLVG + +G LPPVIRR R+CGMCFQNSECMLYHRA EGGD +SSGLE G FDSKV
Sbjct: 599 PALVHRRFLVLEVTYVSARNGRSCREKVLMALEQQG----PQEDPDTAPXXXXXXXXXXXEAATV-NLPADDHGEGAGMAQQRKITLLGDWYDCEVEPGDRVHVLFPMPAXXXXXXXXXXXXXMEEEATRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLL-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNDGXXXXXXXXXXXSGLRRFAHSGRXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDGAMAATVAVYRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGRGGGGGAPLLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGQDASTRGLLVYTAADGLHTELVSPAAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGDADSSGLEPGVFDSKV 1127
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A8K1C8H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8H0_PYTOL) HSP 1 Score: 220 bits (561), Expect = 1.340e-58 Identity = 156/449 (34.74%), Postives = 227/449 (50.56%), Query Frame = 1
Query: 205 QEQCEISLLGDWYDCDVEPGDVVHVL--------FPPSEADDDDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAW------HGAFLAKPNANARNGGFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
++ + L DWY+ +E GD ++++ F + P G S+ ++VDN L+VVHPDILVSPT V + C R+AV++ L ++ A+LG LKHELF+ +L+E G L R V ++V S + L G+ L E++A E+ + W G L +P T ++V V +VLA E+ +WS GLKG DA+VEA + +V+P+E+KTG ++ + H+ QV+LYT+LL RY + GLL+Y A G+ T +S AA +R LV+ARN++AS MA++ +G G EQ + PP++RR DC CFQ EC+L+H AVE G ESSGL+ FD KVGHL EA A+F W R +DLE + E+
Sbjct: 365 EQHVQAELRDDWYETPLEAGDTINLILYEQDQHGFFSQSSSQQQPTQG---LSQTIIVDN-DHHLVVVHPDILVSPTSVTTSFGCLRRAVIRETLNVSRPTNQKALLGTLKHELFQKALVE--------------------------GRHDLEFLRSV--APQVVSSHVLELVGSGLSEESAMFEMGKLMEDYQTWLRNISASGVLLNEPPLA------------PTAGMKVIVQQVLAVEEMLWSIQWGLKGSTDASVEAVFAGANQHDTKSSIVLPLELKTGSKM-YGGVEHQGQVILYTMLLNERY-QQNCRDGLLMY--APGIETNRISAMAAHIRGLVIARNKYASAMARVKALGGAGSTT--SAEQQDSVFPPMLRRRNDCSRCFQVDECVLHHAAVEHGTSESSGLDT-LFDEKVGHLEEADRAYFRRWHRLVDLEQQHAEK 762
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: D0NLR3_PHYIT (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NLR3_PHYIT) HSP 1 Score: 216 bits (551), Expect = 2.750e-57 Identity = 159/441 (36.05%), Postives = 218/441 (49.43%), Query Frame = 1
Query: 211 QCEISLLGDWYDCDVEPGDVVHVLFPPSEADD----DDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNANARNGGFATLGSDETPAV--RVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRP--LVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
Q E L DWYD VE GD ++++F + + DD SR ++VDNA ++VVHPDILVSPT+V + C R+AVLQ LA + SK A LG LKH+LFE +LL+ S +++ RIV + L L+E+ A EL V W NA G T +D P + VSR+L+TE+ +WS GLKG DA+VE + R G +V+P+E+KTG + A + H+ QV+LYTLLL RY + GLL+Y + T ++ A +R L++ RN AS +AK+ +G G PP+IR RDC CFQ EC+L+H A E G E+SSGL+ F HL EA L +F W+R IDLE + E+
Sbjct: 386 QLEAKLSDDWYDVLVEAGDSINIVFTEQDREGFFTHDDETPASRQQSR-ILVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTSKKAFLGTLKHDLFERALLDGLN----------------------------DSVALLEEAKRIVDFNILGLVECGLNEEEALFELQRVVEDYRLW---------VNAAVMGSGTPLNDVPPKAGSKAHVSRILSTEEMMWSIKWGLKGATDASVEGTIIDPGRGNTGPAGSVVLPLELKTGSK-QYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRIAAMATHVRGLIMTRNNFASAIAKVKAIG---------GSTSAQVFPPMIRNRRDCERCFQVDECVLHHAATENGTEDSSGLDE-LFTLMTKHLGEADLTYFKQWNRLIDLEQQHAEK 773
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: K3X802_GLOUD (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X802_GLOUD) HSP 1 Score: 214 bits (546), Expect = 1.280e-56 Identity = 150/445 (33.71%), Postives = 222/445 (49.89%), Query Frame = 1
Query: 205 QEQCEISLLGDWYDCDVEPGDVVHVLFPPSEADDDDPRA----GDETSSRH------LVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNANARNGGFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
+ E L DW+D +E GD ++++F E+ + G ++SSR + VDN ++++HPD+LVSPT V + C R+A+L+ L + ++ A LG LKH LFE SLL+ +++ +++ +IV + L LDE T E+ V W L + G A RV + +VLATE+ +WS GLKG DA+VEA +V+P+E+KTG ++ A + H+ QV+LYTLLL RY + GLL+Y G+ T ++ A +R L++ARN+ AS MAK+ +G ++ PP++R RDC CFQ EC+L+H AVE G EESSGLE F +K GHLS A L++F W+R IDLE + E+
Sbjct: 434 ENHIEAVLADDWFDTMIEAGDTINIVFTERESTGLFSQVVVNQGIDSSSRTPNLTNVIQVDNEHN-IVILHPDVLVSPTSVTTSFGCLRRAILRETLNVNRPTNQKAFLGTLKHNLFEKSLLQG----------------------------EFSAEFLLREAHKIVYDNILGLVECGLDEQTTLLEMKKVIEDYRKWLVEALGRE-------GVALNEPPPGTGARVKIHKVLATEEMMWSIKWGLKGATDASVEATFLTNAVGVQAEKVVLPLELKTGSKV-YAGVEHQGQVILYTLLLNERY-RQRCQDGLLMYVP--GIETNRIAAMATHIRGLIIARNKFASSMAKVKALGSSSSSQ---------IFPPMLRSRRDCERCFQIDECVLHHAAVENGTEESSGLE-DVFTNKTGHLSGADLSYFKLWNRMIDLEQQHAEK 828
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A0W8DK77_PHYNI (DNA replication ATP-dependent helicase/nuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DK77_PHYNI) HSP 1 Score: 210 bits (534), Expect = 4.470e-55 Identity = 158/443 (35.67%), Postives = 217/443 (48.98%), Query Frame = 1
Query: 211 QCEISLLGDWYDCDVEPGDVVHVLFPPSEADDDDPRAGDETSSRHL---VVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNANARNGGFATLGS--DETP---AVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRP--LVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
Q E L DWYD VE GD ++++F + D + SRHL VVDNA ++VVHPDILVSPT+V + C R+AVLQ LA + +K A LG LKH+LFE +LL G E L + +IV S + L L+E+ EL V +W NG A G+ +E P + V+R+L+TE+ +WS GLKG DA+VE + G R +V+P+E+KTG + A + H+ QV+LYTLLL RY + GLL+Y + T ++ A +R L++ RN AS +AK+ +G G PP+IR R+C CFQ EC+L+H A E G E+SSGL F HL EA L +F W+ IDLE + E+
Sbjct: 181 QLEAQLSEDWYDVLVEAGDTINIVFTEQDRDGFFSQDNKTPVSRHLSRIVVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTNKKAFLGTLKHDLFEHALLN-----------------------GLNNAEALLEE-----AKQIVNSNILGLVECGLNEEETLFELQRVIEDYRSWV------------NGAMAGSGTPLNEIPPKNGSKARVTRILSTEEMMWSIKWGLKGATDASVEGTIVNPGGKNGERTGSVVLPLELKTGSK-KYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRITAMATHVRGLIMTRNNFASAIAKVKSIG---------GSTSAQVFPPMIRNRRECERCFQVDECVLHHAATENGTEDSSGLGE-LFTLMTKHLGEADLNYFKHWNHLIDLEQQHAEK 568
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A5D6YCA2_9STRA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCA2_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.410e-55 Identity = 162/441 (36.73%), Postives = 217/441 (49.21%), Query Frame = 1
Query: 217 EISLLGDWYDCDVEPGDVVHVLFPPSEA------DDDDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWH-GAFLAKPNANARNGGFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEA-FVQPLVRATGGRP--LVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
E L DW+D VEPGD V+++F + D P AG S + VDN ++++HPD+LVSPT V ++ C R+AVL L A+LG LKHELFET+L++ G+ E L + RIV + + L L E TA EL V W GA A GG V V VLATE+ +WS GLKG DA+VEA F + G R +V+PVE+KTG + A H QV+LYTLLL RY + S GLL+Y G+ T V AA +R+L++ RN+ A MAK+ +G ++ PP++R DC CFQ +EC+L+H AVE G ESSGL F +K+GHL +A LA+F W R I+LE + E+
Sbjct: 378 EAELADDWFDTAVEPGDTVNIVFTERDRAGFFAQDAARPPAG---SPELIRVDN-DRNIVILHPDVLVSPTSVTTSMGCLRRAVLCETLNVSGPTHPKALLGTLKHELFETALVQ-----------------------GEHSVEFLLHEAR-----RIVQNNIIGLVECGLSEQTALAELAQVIEHYKTWLVGAASA--------GGVVLNEPPPGTGATVRVHTVLATEEMMWSVKWGLKGATDASVEATFSSSQLERDGQRQETVVLPVELKTGNKTYTAT-EHHGQVVLYTLLLNERY-RQPSQHGLLLYVP--GIETNKVPALAARVRSLLILRNKFAGSMAKVKALGSAAASQ---------VFPPMLRSRSDCERCFQVNECVLHHAAVENGSPESSGLG-DVFVAKLGHLGDADLAYFKRWTRMIELEQQHAEK 764
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A2D4BEP1_PYTIN (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEP1_PYTIN) HSP 1 Score: 206 bits (525), Expect = 7.260e-54 Identity = 156/445 (35.06%), Postives = 228/445 (51.24%), Query Frame = 1
Query: 205 QEQCEISLLGDWYDCDVEPGDVVHVLFPPSEADD---DDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAW------HGAFLAKPNANARNGGFATLGSDETPAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEA-FVQPLVRATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
+ Q E L+ DW+D +E GD ++++ + P T + + VDN S L+VVHPDILVSPT V + C R+AVL+ L ++ A+LG +KHELF+ +L++ ++ + P + R ++ L+ + L ED A EL V W G L +P ++ +G T+GS +LA E+ +WS GLKG D +VEA F + T ++P+E+KTG ++ + H+ QV+LYTLLL RY ++ GLL+Y A G+ T V+ AA +R LV+ARN+ AS MA RV +G Q +Q ALP ++RR RDC CFQ EC+L+H AVE G+ +SS L+ FD KVGHLS+A A+F W+R +DLE E+
Sbjct: 452 ERQVEAILMEDWFDTPLEAGDTINLVLTHCDGQGFFFSQPLEN-ATQATTVTVDN-SHHLVVVHPDILVSPTSVTTSFGCLRRAVLRETLNVSRPTNEKALLGTMKHELFQHALIKGEVSSQV--------------------SSPASKTRC----------HIQ-LFESGLSEDKALVELQKVVDDFATWLRDAPGRGILLNEPPGSSTSGHMVTIGS------------ILAVEEMLWSIQWGLKGSTDVSVEAVFSNDPEKRT-----ILPIELKTGSKM-YGGVEHQGQVILYTLLLNERY-QQSCHHGLLLY--APGIETNRVTAMAAHIRGLVMARNKFASAMA---RVKAMGNATTAQQQQ---ALPTMLRRRRDCERCFQIDECVLHHAAVENGNSDSSALDE-LFDEKVGHLSDADRAYFRKWNRLLDLEQLHAER 835
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A0P1B3G7_PLAHL (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3G7_PLAHL) HSP 1 Score: 205 bits (522), Expect = 1.780e-53 Identity = 149/436 (34.17%), Postives = 210/436 (48.17%), Query Frame = 1
Query: 211 QCEISLLGDWYDCDVEPGDVVHVLFPPSEADD--DDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNANARNGGFATLGSDETP-AVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLVRATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
Q E L DWYD ++ GD ++++F + D G S+ ++VDNA ++VVHPDILVSPT+V + C R+AVLQ LA +K A G LKHELFE +LL G + +S+ ++ RI+ S + L +++E+ A EL V +W A + G L D + +V V RV++TE+ VWS GLKG DA+VE + V PVE+KTG I H+ QV+LYTLLL RY + GLL+Y + T ++ +R L++ RN AS +A++ +G G P +IR RDC CFQ EC+L+H A E G E+SSGL+ F K HL E L +F W R I+LE + E+
Sbjct: 370 QNEAILRDDWYDSIIDAGDTINIVFTEQDKDGFYSQDGIGMPVDSQQILVDNAHN-IVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVSRPTNKKAFWGTLKHELFEFALLH--------------------------GLD--SSESFLEAAKRIITSNILGLVECEVNEEDALLELKKVIEEFRSWISAAIV--------GSGTPLNVDSSNNRTKVHVDRVISTEEMVWSIKWGLKGATDASVEGTILVSGSCERQEKTVFPVELKTG--IKTTMGDHQGQVLLYTLLLNERY-RQRCQDGLLIYVPP--IQTNRIAAVTTHVRGLIMTRNHFASAVARVKSIG---------GSSSTQVYPSMIRNRRDCERCFQIDECVLHHAATENGTEKSSGLD-DLFTLKTQHLGEEDLNYFKQWIRLIELEQQHAEK 753
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Match: A0A484E6F4_BRELC (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6F4_BRELC) HSP 1 Score: 202 bits (515), Expect = 1.470e-52 Identity = 152/438 (34.70%), Postives = 215/438 (49.09%), Query Frame = 1
Query: 211 QCEISLLGDWYDCDVEPGDVVHVLFPPSEADDDDPRAGDETSSRHLVVDNASGRLLVVHPDILVSPTKVADTVLCARKAVLQSRLASDASKSKAAVLGNLKHELFETSLLEAATATSAARSFASSGNAAALAWRGDRGTEPLTSQRMVKLVDRIVLSQLEALYGADLDEDTARGELLAVSGPILAWHGAFLAKPNANARNGGFATLGSDET---PAVRVSVSRVLATEDDVWSPVLGLKGIMDATVEAFVQPLV--RATGGRPLVMPVEVKTGKRIGEARIGHRAQVMLYTLLLRMRYGNEASTSGLLVYTSAEGLHTELVSPAAAELRALVLARNRHASGMAKIGRVGLVGRNEGGQGEQGGAALPPVIRRARDCGMCFQNSECMLYHRAVEGGDEESSGLERGTFDSKVGHLSEAHLAFFASWDRTIDLEAKIGEQ 1509
Q E L DWY+ V+ GD ++++F + +E + VD A L+VVHPDILVSPT+V + C R+AV+Q LA +K A LG LKHELFE +LL T RG +Q IV + + L ++E+ A EL V +W A + G TL ++ T + ++ VSRV++TE+ +WS GLKG DA++E + L R+ ++ P+E+KTG + A + H+ QV+LYTLLL RY + GLLVY + T +S ++ +R LV+ARN AS MAK+ + G PP+IR+ R+C CFQ EC+L+H A E G EESSGL F HL EA +F W R +DLE + E+
Sbjct: 359 QLEAILQDDWYELTVDAGDTINLIFTEQFKE-----KSEEGRQEQIWVDKAKN-LVVVHPDILVSPTRVTTSFGCLRRAVVQETLAVAGVMNKKAFLGTLKHELFEFALLNGLDKT--------------------RGLYEAATQ--------IVQTNILGLVECGINEEDAFFELERVIEDFRSWISAAMF---------GSGTLLNETTLNNVSKKIHVSRVISTEEMMWSIKWGLKGATDASIEGNIVSLGKRRSEETESVIFPLELKTGSK-KFAALEHQGQVILYTLLLNERY-RQRCQDGLLVYVPP--IETNRISVNSSHVRGLVMARNNFASAMAKV---------KSFSGSASAQVYPPMIRKRRECERCFQVDECVLHHAATENGTEESSGLG-DFFTLMTNHLKEADFNYFKHWTRLVDLEQQYAEK 739 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12938.2152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12938.2152.1 >prot_H-elongata_contig12938.2152.1 ID=prot_H-elongata_contig12938.2152.1|Name=mRNA_H-elongata_contig12938.2152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp PAIVHRRFLVLEVTYASVRTETFSRGKMLMSIEQVPHGWTAVEEDDTDREback to top mRNA from alignment at H-elongata_contig12938:5459..8271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12938.2152.1 ID=mRNA_H-elongata_contig12938.2152.1|Name=mRNA_H-elongata_contig12938.2152.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2813bp|location=Sequence derived from alignment at H-elongata_contig12938:5459..8271+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12938:5459..8271+ >mRNA_H-elongata_contig12938.2152.1 ID=mRNA_H-elongata_contig12938.2152.1|Name=mRNA_H-elongata_contig12938.2152.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3078bp|location=Sequence derived from alignment at H-elongata_contig12938:5459..8271+ (Himanthalia elongata Himel1 dioecious)back to top |