mRNA_H-elongata_contig128840.2124.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A6H5KV08_9PHAE (cobW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV08_9PHAE) HSP 1 Score: 337 bits (865), Expect = 3.550e-115 Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = 1
Query: 1 AQDMGYEEHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
+Q+ + EHGHTHEHMDHPG F+DR+PP R L+ER++TVGIGGPVGSGKTALMLELCK LRD+LSIGAVTNDIFTREDAEFLTKN+ALEEGRI AIETGGCPHAAIREDISANL ACETLTARH+ D+ILVESGGD+LAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGA+L
Sbjct: 39 SQNPTFAEHGHTHEHMDHPGFFADREPPQPDRALAERSYTVGIGGPVGSGKTALMLELCKLLRDELSIGAVTNDIFTREDAEFLTKNSALEEGRILAIETGGCPHAAIREDISANLGACETLTARHETDIILVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGADL 231
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A836CD81_9STRA (Urease accessory protein ureG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD81_9STRA) HSP 1 Score: 300 bits (767), Expect = 3.160e-100 Identity = 148/179 (82.68%), Postives = 161/179 (89.94%), Query Frame = 1
Query: 43 HMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
H++H G F +R+PPL RDL +RAFTVGIGGPVGSGKTALMLELCK LRD+ SI AVTNDIFTREDAEFLT+NAAL E RIAAIETGGCPHAAIREDISANL ACE +T RH D++LVESGGD+LAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDL VINK DLA+AVGA+L
Sbjct: 49 HLEHAGCFHEREPPLNSRDLKDRAFTVGIGGPVGSGKTALMLELCKRLRDNYSIAAVTNDIFTREDAEFLTRNAALAEDRIAAIETGGCPHAAIREDISANLSACEIMTTRHACDIVLVESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLFVINKIDLADAVGADL 227
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A7W1F4B9_9BACT (Urease accessory protein UreG n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1F4B9_9BACT) HSP 1 Score: 283 bits (725), Expect = 2.220e-94 Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
+HGHTHEH+DHPG F+ R+ P+ RD S+RAFTVGIGGPVGSGKTALML+LC++LRD ++ AVTNDIFT+ED EFL +N AL RI A+ETGGCPHAAIREDI+ANL+A E L AR +++L+ESGGD+LAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLA VGA+L
Sbjct: 15 DHGHTHEHLDHPGHFAQRERPVR-RDFSQRAFTVGIGGPVGSGKTALMLQLCRALRDSHALAAVTNDIFTKEDGEFLVRNQALPAERIRAVETGGCPHAAIREDITANLVALEELHARFAPEILLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAPHVGADL 199
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A7W1TC91_9BACT (Urease accessory protein UreG n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1TC91_9BACT) HSP 1 Score: 283 bits (725), Expect = 2.380e-94 Identity = 141/184 (76.63%), Postives = 159/184 (86.41%), Query Frame = 1
Query: 28 GHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
GHTHEH++H G F +RD PL RD SERAFTVGIGGPVGSGKTALML+LC+ LR +SI AVTNDIFT+ED EFL +N ALE GRI A+ETGGCPHAAIREDI+ANLMA E L ++ ++L+ESGGD+LAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDL +INKTDLA AVGA+L
Sbjct: 19 GHTHEHLEHAGHFHERDQPLP-RDFSERAFTVGIGGPVGSGKTALMLQLCRRLRATMSIAAVTNDIFTKEDGEFLIRNEALEAGRIRAVETGGCPHAAIREDITANLMALEELHGLYRPQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLFIINKTDLATAVGADL 201
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A162U528_PHYB8 (cobW domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162U528_PHYB8) HSP 1 Score: 284 bits (726), Expect = 4.560e-94 Identity = 141/190 (74.21%), Postives = 160/190 (84.21%), Query Frame = 1
Query: 13 GYEEHGHTHEHMDHPGIFSDRDPPLL-HRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
G +EHGHTHE MDHPG +++R + HRD SERAFTVGIGGPVGSGKTALML LC+ LR+ S+ AVTNDIFT+ED EFL + AL E RI AIETGGCPHAAIRED+SANL A E L A+ ++L+ESGGD+LAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLV+NKTDLAE +GA+L
Sbjct: 41 GTQEHGHTHEQMDHPGHYAERPKAIYNHRDWSERAFTVGIGGPVGSGKTALMLALCQRLREKYSVAAVTNDIFTKEDTEFLVREKALPEERIMAIETGGCPHAAIREDVSANLNALEVLHAKFNTQLLLIESGGDNLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVVNKTDLAEIIGADL 230
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: K3X4S2_GLOUD (cobW domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4S2_GLOUD) HSP 1 Score: 282 bits (722), Expect = 6.140e-94 Identity = 143/186 (76.88%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
EHGHTHEH +H G F +RDP RD S RAFTVGIGGPVGSGKTALML LC+ L+D SI AVTNDIFTRED EFL ++ AL E RI AIETGGCPHAAIREDISANL ACE LT A M+LVESGGD+LAAN+SRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA V A+L
Sbjct: 15 EHGHTHEHFEHAGHFDERDPVHSGRDFSLRAFTVGIGGPVGSGKTALMLALCQELKDKFSIAAVTNDIFTREDGEFLVRHQALPEERIRAIETGGCPHAAIREDISANLQACEDLTDEFDAQMVLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVNADL 200
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A067CTU7_SAPPC (cobW domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTU7_SAPPC) HSP 1 Score: 284 bits (727), Expect = 6.850e-94 Identity = 142/186 (76.34%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
+HGHTHEH++H G+F R+P L+ RD ERAFTVGIGGPVGSGKTALML LC++LRD L I AVTNDIFT+ED EFL K+ AL E RI A+ETGGCPHAAIREDISANL ACE LT Q ++LVESGGD+LAAN+SRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGA+L
Sbjct: 71 DHGHTHEHLEHAGVFEHREP-LIERDYLERAFTVGIGGPVGSGKTALMLALCEALRDRLQIAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDISANLQACEELTDLFQLQLVLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPHVGASL 255
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A485KU00_9STRA (Aste57867_11629 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU00_9STRA) HSP 1 Score: 284 bits (727), Expect = 9.480e-94 Identity = 139/186 (74.73%), Postives = 160/186 (86.02%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
EHGHTHEHM+H G++ +R+P L RD ERAFT+GIGGPVGSGKTALML LC++LRD+ I AVTNDIFT+ED EFL K+ AL E RI A+ETGGCPHAAIREDISANL ACE L+ + +M+LVESGGD+LAAN+SRELADYI+YVIDVAGGDKVPRKGGPGITQ+DLLVINK DLA VGA+L
Sbjct: 80 EHGHTHEHMEHAGVYEEREP-TLQRDFMERAFTIGIGGPVGSGKTALMLALCEALRDNYRIAAVTNDIFTKEDGEFLVKHNALPEERIRAVETGGCPHAAIREDISANLQACEELSTQFNLEMVLVESGGDNLAANFSRELADYIVYVIDVAGGDKVPRKGGPGITQADLLVINKIDLAPYVGASL 264
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: W4GML0_9STRA (Urease accessory protein UreG n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GML0_9STRA) HSP 1 Score: 283 bits (724), Expect = 1.010e-93 Identity = 138/186 (74.19%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
EHGH HE +DH G+F +R+P RD ERAFT+GIGGPVGSGKTALML LC++LRD S+ AVTNDIFT+ED EFL + AL E RI A+ETGGCPHAAIREDISANL ACE L+++ DM+LVESGGD+LAAN+SRELADYI+YVIDVAGGDKVPRKGGPGITQ+DLLVINKTDLA VGA+L
Sbjct: 50 EHGHIHERLDHAGVFDEREPAKSLRDFEERAFTIGIGGPVGSGKTALMLALCEALRDTYSLAAVTNDIFTKEDGEFLVAHHALPETRIRAVETGGCPHAAIREDISANLQACEDLSSQFALDMVLVESGGDNLAANFSRELADYIVYVIDVAGGDKVPRKGGPGITQADLLVINKTDLAPHVGASL 235
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Match: A0A0P1B1Q8_PLAHL (Urease accessory protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1Q8_PLAHL) HSP 1 Score: 282 bits (722), Expect = 1.790e-93 Identity = 140/186 (75.27%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 22 EHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTALMLELCKSLRDDLSIGAVTNDIFTREDAEFLTKNAALEEGRIAAIETGGCPHAAIREDISANLMACETLTARHQADMILVESGGDDLAANYSRELADYIIYVIDVAGGDKVPRKGGPGITQSDLLVINKTDLAEAVGANL 579
EHGHTHEH++H GIF +RD RD +RAFTVGIGGPVGSGKTALML LC++L+D S+ AVTNDIFTRED+EFL ++ AL + RI AIETGGCPHAAIREDISANL ACE LT ++LVESGGD+LAAN+SRELADYIIYVIDVAGGDKVPRKGGPGITQ+DLLVINKTDLA VGA+L
Sbjct: 49 EHGHTHEHLEHAGIFHERDTAKSDRDWVQRAFTVGIGGPVGSGKTALMLALCRALKDKFSLAAVTNDIFTREDSEFLVRHDALPKERIRAIETGGCPHAAIREDISANLQACEDLTEEFHPQLLLVESGGDNLAANFSRELADYIIYVIDVAGGDKVPRKGGPGITQADLLVINKTDLAPHVGADL 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128840.2124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig128840.2124.1 >prot_H-elongata_contig128840.2124.1 ID=prot_H-elongata_contig128840.2124.1|Name=mRNA_H-elongata_contig128840.2124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp MGYEEHGHTHEHMDHPGIFSDRDPPLLHRDLSERAFTVGIGGPVGSGKTAback to top mRNA from alignment at H-elongata_contig128840:136..1870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig128840.2124.1 ID=mRNA_H-elongata_contig128840.2124.1|Name=mRNA_H-elongata_contig128840.2124.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1735bp|location=Sequence derived from alignment at H-elongata_contig128840:136..1870+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig128840:136..1870+ >mRNA_H-elongata_contig128840.2124.1 ID=mRNA_H-elongata_contig128840.2124.1|Name=mRNA_H-elongata_contig128840.2124.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at H-elongata_contig128840:136..1870+ (Himanthalia elongata Himel1 dioecious)back to top |