mRNA_H-elongata_contig12867.2108.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12867.2108.1
Unique NamemRNA_H-elongata_contig12867.2108.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: D8LHV4_ECTSI (Inositol-pentakisphosphate 2-kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV4_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 5.420e-161
Identity = 259/406 (63.79%), Postives = 303/406 (74.63%), Query Frame = 1
Query:    4 SIDHLRPAGRTTRDSGHWSPAAQLEPNKTDFWLDLPMG------FKDVCENTNESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVLD---------LARAVEKAGLGTGDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVSLCGGSEDAALSMLEDQQANPFEALPPDADLIVPEETLAALRAGSAIPEG-AESLDSLYDKGVRAVERLDVQNCVQLLRRCVIALGIMDCSVMMSLKAVKIEDEK-QVDMAESMSVQGPDVAGTLQTADGRWVAYCVSVVDAGPKPPTKLSTKPKHEHKIWDFWASREEATKI 1170
            SIDHLRP GR  +D+G WS A QLEP+KT FWL LP             +   +  VIAVE+KPKGA MPVG+LVPPGNNRLK+RV RFDAQQ FKA  +QSWGSIDRPCLYHP+E YSG+  RAAA LKELMK PQNKLRAWENGNM+FGAGSG+GG+ + +         L +AV  A L  GDG  PA ALMDL+GEILA+E LVS LVA Q LDVLE+EGGGLVFDK VSLCGGS++ AL+MLE Q+++PF A P D DLIVP+ TL ALRAGS +  G A S+D+L+ KG+ AVE+L V++CVQLLRR +IALG+MDCSVMMSLK++  E E       +  +VQG DVAG  QT  GR VAYCVSVVDAGPKPPTKLS K KHE +IWDF A  EEA ++
Sbjct:  114 SIDHLRPEGRIKKDNGDWSSACQLEPDKTAFWLKLPSAPSTAGPASPTEDRKKKGIVIAVEIKPKGATMPVGTLVPPGNNRLKYRVARFDAQQRFKAQGKQSWGSIDRPCLYHPRELYSGDAGRAAATLKELMKTPQNKLRAWENGNMLFGAGSGKGGEDMTESGETAGEVALGKAVVAARLAGGDGT-PAEALMDLVGEILAKEPLVSRLVAAQALDVLEVEGGGLVFDKLVSLCGGSKEEALNMLEAQESDPFVAEPTDKDLIVPKATLEALRAGSPVLAGEASSIDTLHAKGLLAVEKLGVKDCVQLLRRYIIALGVMDCSVMMSLKSIPAEPEGGSGGEGQPSAVQGTDVAGVFQTGGGRRVAYCVSVVDAGPKPPTKLSGKAKHEAEIWDFVAGLEEAGQV 518          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A7S2KBK3_9STRA (Inositol-pentakisphosphate 2-kinase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBK3_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.330e-23
Identity = 93/346 (26.88%), Postives = 163/346 (47.11%), Query Frame = 1
Query:  157 IAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANK--EQSW--GSIDR---PCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVLDLARAVEKAGLGTGDGKEPA---GALMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVSLCGGSEDAALSMLEDQQANPFEALPPDADLIVP---------EETLAALRA-GSAIPEGAES----LDSLYDKGVRAVERLDVQNCVQLLRRCVIALGIMDCSVMMSLKAVKIEDEKQVDMAESMSVQGPDVAGTLQTADGRWVAYCVSVVDAGPKPPTKLSTKPKHE 1122
            I +E+ PK   +    LV P  +R+K R  R+   Q+  +N    + W  G+ D    P  + P EF+SGE +   +++  L + PQN LR W NG +I+G       D +       E   L      E A    +L  L+G IL RE L+ +++  QR D+++++G   V+D+ V +CG + +AA + ++      F     D    +P         +E +  ++    A+P   E+    LD  Y+  +  V++L  ++CV +L+  +I+L + D S+M+ +    +++  ++   ES         G++    G    Y + +VD  PKP TKL  + K E
Sbjct:   66 IVLEITPKCGFLCSSPLVQP-EHRIKFRRHRYGLFQELMSNGLLRKGWMSGNCDASFIPSSFSPLEFFSGEISNVESSMLSLFERPQNNLRIWCNGQIIYGH------DKMNLTVEEFEAIQLAISSNAEKAMIFQSLASLVGTILTREPLIQNILNLQRADIIDVDGMIKVYDRLVEICG-TREAAEACIKYPSCPEFHITADDVCSFIPFSRPGCVHLDELMHEVQKFADALPGQKETNDLFLDEKYEYCLNIVQKLSKESCVWILQGWLISLAMCDLSIMLGISPGSLDEGDRMQNLES--------CGSISLEAGV-CNYSLKLVDYDPKPSTKLRNREKQE 394          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A9NW39_PICSI (Inositol-pentakisphosphate 2-kinase n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NW39_PICSI)

HSP 1 Score: 79.7 bits (195), Expect = 8.000e-12
Identity = 81/321 (25.23%), Postives = 141/321 (43.93%), Query Frame = 1
Query:   61 PAAQLEPNKTDFWLDLPMGFKD---VCENTNESE-VIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEG------GDHVLDLARAVE---KAGLGTGDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVS----LC--GGSEDAALSMLEDQQANPFEALPPD-----ADLIVPEETLAALRAGSAIPEGAESLDSLYDKGVRA--VERLDVQNCVQLLRRCVIALGIMDCSVMMSLK 945
            PA ++E  K D   D  +   D        N++   I++E+KPK   +P    +    N +K  V RF   Q  K ++++    I     Y P + +S    R   A++ L + PQN LR + NG+++FG   G        G  +  LAR +E   K+ +    G+  A    DL+ E L R  ++SHL+A Q++D+ +IEG    +   +     +C    SE   L+  E+ + NP E +  D     +DL  P     +L           +   L+        +  L ++   +++R  ++A    DCS+M++ +
Sbjct:  127 PAWRIEAAKIDLQSDFALIMSDHSLFLRGPNDTAPCISIEIKPKCGFLPSSRFIS-AENHIKRLVSRFAMHQHLKFSQKE----ISCISKYSPLDLFSESRDRIHRAIEGLFETPQNNLRIFWNGSLVFGGLGGYAEQGLCNGPTINSLARELEDTLKSVILCQSGERVA-IFKDLVTETLLRTRILSHLLAVQKMDLYDIEGAIHAYFNVIQVPCHICPHSVSEAGNLNEAENIEINPDEPIEKDMQENNSDLHFPSSITESLSEEHMEKHTQGNFSYLHSSKNECSHLHSLSIEESRRIVRDFLLATTAKDCSLMLTFQ 441          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A6P5F7L3_ANACO (Inositol-pentakisphosphate 2-kinase n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F7L3_ANACO)

HSP 1 Score: 79.3 bits (194), Expect = 8.530e-12
Identity = 67/222 (30.18%), Postives = 99/222 (44.59%), Query Frame = 1
Query:   61 PAAQLEPNKTDFWLDLPMGFKD---VCENTNESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGA-GSGEGGDHVLDLARAVEKAGLGTGDGKEPAGA----LMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVS----LCGGSEDAAL 690
            P +++   K D   D  +   D         E   IAVE+KPK   +P    +   N+  KH V R+   Q  K       G I +     P + +S    R   A+K L  APQN LR + NG++IFG  G  E   H  + +R  E       D  E +G      ++L+GE L +  ++  L+A Q+LDVL+IEG    +   +S    +C  + DA L
Sbjct:  124 PISRVNAAKIDTLSDSALLISDHSIFAGTPREGTSIAVEIKPKCGFLPSSEYIAKANSIKKH-VTRYKMHQLLKLQH----GEILKASECDPLDLFSQSKDRIRRAIKALFAAPQNNLRVFLNGSLIFGGMGGAEDKVHSREASRNFE-------DLLELSGVQLSTFIELVGEALHKSGVLDPLLATQKLDVLDIEGAIHAYYDVISQPCLVCENTTDAEL 333          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A835S294_VANPL (Inositol-pentakisphosphate 2-kinase n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835S294_VANPL)

HSP 1 Score: 77.4 bits (189), Expect = 3.950e-11
Identity = 64/223 (28.70%), Postives = 98/223 (43.95%), Query Frame = 1
Query:   52 HWSPAAQLEPNKTDFWLDLPMGFKD---VCENTN---ESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVLDLARAVEKAGLGTGDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVS----LCGGSEDAAL 690
            H  P  +++ +  D + +  M F D   +  +     E    AVE+KPK   +P    +    N +K  V RF   Q  K +K    G I +   Y+P + +SG+  R   A+  L   PQN LR + NG++I+G G G G D+        E   +    G      L +L+ E +   S +  L+  Q+LDV +IEG    +   +S     C  S D AL
Sbjct:  152 HQRPPWRIDVSDVDTFCNFAMLFSDHSVIMRSPGTLIEDVCFAVEIKPKCGFLPDSEFIA-NRNAVKKHVTRFRMHQTLKLHK----GEISKISEYNPLDLFSGKRERIHQAIIALFDTPQNNLRIFVNGSLIYG-GLGGGIDNSALCFGVGEIENISKTFGLRLTSCL-ELVTEAIFSSSALEKLLVAQKLDVFDIEGAIHAYYNIISQPCLACKNSTDPAL 367          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A067HA19_CITSI (Inositol-pentakisphosphate 2-kinase (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067HA19_CITSI)

HSP 1 Score: 75.1 bits (183), Expect = 8.440e-11
Identity = 52/165 (31.52%), Postives = 81/165 (49.09%), Query Frame = 1
Query:  145 ESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGA-GSGEGGDHVLDLARAVEKAGLGT--GDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEG 630
            E   +AVE+KPK   +P+   +    N +K  V RF   Q  K ++++    I     Y P + +SG   R   A+K L   PQN LR + NG++IFG+ G G  G+ V  +  A E A   T   D      + + L+ E + +  ++  L+  Q+LD  +IEG
Sbjct:   54 EEPCLAVEIKPKCGFLPISRFIAE-ENAIKRSVTRFQLHQALKLSEQE----ISERSEYDPLDLFSGSKERICKAIKALYTNPQNNLRVFLNGSLIFGSLGGGMCGNSVA-VGEAFEDALKCTIKADNGLRTDSFIQLVAETVHQAGILDRLLEVQKLDNFDIEG 212          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A200QE39_9MAGN (Inositol-pentakisphosphate 2-kinase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QE39_9MAGN)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-10
Identity = 55/177 (31.07%), Postives = 84/177 (47.46%), Query Frame = 1
Query:  139 TNESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVLDLARAVE-KAG--LGTGDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEGGGLVFDKFVS 660
            + E+  I+VE+KPK   +P    +  GN  LK  + RF   Q  K +     G I +   Y P + +SG   R   A+K L   PQN LR + NG++IFG   G   D  + +  A E K G  + T  G   A    +L+ E + +  +++ L+  Q+ D  +IEG    +   VS
Sbjct:  155 SKEAPCISVEIKPKCGFLPCSRFIAEGN-ALKRNISRFRMHQVLKLHL----GEISQISEYDPLDLFSGSSERINKAIKSLFTTPQNNLRIFLNGSLIFGGLGGGTDDTSIMVNEAFEDKIGDVIQTKRGLRLAS-FQNLVAETIFQSGVLNQLLEAQKCDSFDIEGAIHAYYNIVS 325          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: V4V841_CITCL (Inositol-pentakisphosphate 2-kinase n=5 Tax=Citrus TaxID=2706 RepID=V4V841_CITCL)

HSP 1 Score: 73.9 bits (180), Expect = 4.220e-10
Identity = 49/164 (29.88%), Postives = 77/164 (46.95%), Query Frame = 1
Query:  145 ESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVLDLARAVEKAGLGT--GDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEG 630
            E   +AVE+KPK   +P+   +    N +K  V RF   Q  K ++++    I     Y P + +SG   R   A+K L   PQN LR + NG++IFG+  G    +      A E A   T   D      + + L+ E + +  ++  L+  Q+LD  +IEG
Sbjct:  162 EEPCLAVEIKPKCGFLPISRFIAE-ENAIKRSVTRFQLHQALKLSEQE----ISERSEYDPLDLFSGSKERICKAIKALYTNPQNNLRVFLNGSLIFGSLGGGMCGNSFAFGEAFEDALKCTIKADNGLRTDSFIQLVAETVHQAGILDRLLEVQKLDNFDIEG 320          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A162AHP3_DAUCS (Inositol-pentakisphosphate 2-kinase n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162AHP3_DAUCS)

HSP 1 Score: 73.6 bits (179), Expect = 6.330e-10
Identity = 51/162 (31.48%), Postives = 77/162 (47.53%), Query Frame = 1
Query:  157 IAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFGAGSGEGGDHVL----DLARAVEKAGLGTGDGKEPAGALMDLIGEILARESLVSHLVAGQRLDVLEIEG 630
            I+VE+KPK   +P    +    N +K  + RF   Q  K ++    G + +   Y P + +SG       A+K+L+  PQN LR + NG +IFG GSG   D       +L     K  +   DG       + L+ E + R  L+  L+  Q+LD L+IEG
Sbjct:  161 ISVEIKPKCGFLPASRFIAD-ENYVKRCITRFKMHQALKLHQ----GKVSKISEYDPLDLFSGSLETVNKAMKDLIVTPQNNLRVFLNGTLIFG-GSGGLADPTCCLNEELLEDALKCVIQAEDGMRTTN-FLHLVAEAVCRPGLLDRLLEVQKLDKLDIEG 315          
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Match: A0A8C4QVS8_EPTBU (Inositol-pentakisphosphate 2-kinase n=3 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QVS8_EPTBU)

HSP 1 Score: 72.8 bits (177), Expect = 1.260e-9
Identity = 48/144 (33.33%), Postives = 68/144 (47.22%), Query Frame = 1
Query:    7 IDHLRPAGRTTRDSGHWSPAAQLEPNKTDFWLDLPMGFKDVCENTNESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQQDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRAWENGNMIFG 438
            I H RPA R  +    WS  A   PN T   L  P G +        ++V+ +E+KPK   +P    V    + LK RV R+   Q  K       G   +   Y P + YSG+  R   A++ L++ PQN LR ++NG +IFG
Sbjct:   92 IHHFRPASRHGKTMDVWSGFATRLPNLTR--LQPPEGLEP------HADVLCIEIKPKCGFLPTPCRV---RSMLKQRVCRYCMHQYLKVTN----GKCKKVNRYCPLDLYSGDVQRMEFAIRGLLENPQNNLRVFKNGELIFG 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12867.2108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV4_ECTSI5.420e-16163.79Inositol-pentakisphosphate 2-kinase n=2 Tax=Ectoca... [more]
A0A7S2KBK3_9STRA2.330e-2326.88Inositol-pentakisphosphate 2-kinase n=2 Tax=Leptoc... [more]
A9NW39_PICSI8.000e-1225.23Inositol-pentakisphosphate 2-kinase n=1 Tax=Picea ... [more]
A0A6P5F7L3_ANACO8.530e-1230.18Inositol-pentakisphosphate 2-kinase n=3 Tax=Ananas... [more]
A0A835S294_VANPL3.950e-1128.70Inositol-pentakisphosphate 2-kinase n=1 Tax=Vanill... [more]
A0A067HA19_CITSI8.440e-1131.52Inositol-pentakisphosphate 2-kinase (Fragment) n=1... [more]
A0A200QE39_9MAGN1.390e-1031.07Inositol-pentakisphosphate 2-kinase n=1 Tax=Maclea... [more]
V4V841_CITCL4.220e-1029.88Inositol-pentakisphosphate 2-kinase n=5 Tax=Citrus... [more]
A0A162AHP3_DAUCS6.330e-1031.48Inositol-pentakisphosphate 2-kinase n=3 Tax=Daucus... [more]
A0A8C4QVS8_EPTBU1.260e-933.33Inositol-pentakisphosphate 2-kinase n=3 Tax=Eptatr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12867contigH-elongata_contig12867:491..3465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score442.6
Seed ortholog evalue1.8e-121
Seed eggNOG ortholog2880.D8LHV4
Preferred nameIPPK
KEGG rclassRC00002,RC00078
KEGG koko:K10572,ko:K12189
KEGG ReactionR05202
KEGG Pathwayko00562,ko01100,ko04070,ko04144,map00562,map01100,map04070,map04144
KEGG ModuleM00132,M00410
GOsGO:0003341,GO:0003351,GO:0003674,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005975,GO:0006020,GO:0006066,GO:0006355,GO:0006356,GO:0006793,GO:0006796,GO:0006810,GO:0006928,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0008150,GO:0008152,GO:0009058,GO:0009799,GO:0009855,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015630,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019637,GO:0019751,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032947,GO:0032958,GO:0033059,GO:0035299,GO:0036064,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045893,GO:0045935,GO:0045943,GO:0046165,GO:0046173,GO:0046835,GO:0046907,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051875,GO:0051904,GO:0051905,GO:0052746,GO:0060255,GO:0060287,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090407,GO:0120025,GO:0120038,GO:1901576,GO:1901615,GO:1901617,GO:1901836,GO:1901838,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.inositol pentakisphosphate 2-kinase activity
EggNOG OGsKOG4749@1,KOG4749@2759
EC2.7.1.158
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionInositol-pentakisphosphate 2-kinase
Ec32 orthologEc-18_000620.1
Exons3
Model size2336
Cds size1065
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12867.2108.1prot_H-elongata_contig12867.2108.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12867 602..2305 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.5327172-UTR-H-elongata_contig12867:490..6011622929764.5327172-UTR-H-elongata_contig12867:490..601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 491..601 +
1691679148.7381074-UTR-H-elongata_contig12867:490..6011691679148.7381074-UTR-H-elongata_contig12867:490..601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 491..601 +
1622929764.6296546-UTR-H-elongata_contig12867:2305..34651622929764.6296546-UTR-H-elongata_contig12867:2305..3465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 2306..3465 +
1691679148.779567-UTR-H-elongata_contig12867:2305..34651691679148.779567-UTR-H-elongata_contig12867:2305..3465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12867 2306..3465 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929764.567049-CDS-H-elongata_contig12867:601..10081622929764.567049-CDS-H-elongata_contig12867:601..1008Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 602..1008 +
1691679148.7528324-CDS-H-elongata_contig12867:601..10081691679148.7528324-CDS-H-elongata_contig12867:601..1008Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 602..1008 +
1622929764.5826936-CDS-H-elongata_contig12867:1452..16111622929764.5826936-CDS-H-elongata_contig12867:1452..1611Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 1453..1611 +
1691679148.7609446-CDS-H-elongata_contig12867:1452..16111691679148.7609446-CDS-H-elongata_contig12867:1452..1611Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 1453..1611 +
1622929764.6131706-CDS-H-elongata_contig12867:1806..23051622929764.6131706-CDS-H-elongata_contig12867:1806..2305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 1807..2305 +
1691679148.7698097-CDS-H-elongata_contig12867:1806..23051691679148.7698097-CDS-H-elongata_contig12867:1806..2305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12867 1807..2305 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12867.2108.1

>prot_H-elongata_contig12867.2108.1 ID=prot_H-elongata_contig12867.2108.1|Name=mRNA_H-elongata_contig12867.2108.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=355bp
MGFKDVCENTNESEVIAVEVKPKGAVMPVGSLVPPGNNRLKHRVWRFDAQ
QDFKANKEQSWGSIDRPCLYHPKEFYSGEPARAAAALKELMKAPQNKLRA
WENGNMIFGAGSGEGGDHVLDLARAVEKAGLGTGDGKEPAGALMDLIGEI
LARESLVSHLVAGQRLDVLEIEGGGLVFDKFVSLCGGSEDAALSMLEDQQ
ANPFEALPPDADLIVPEETLAALRAGSAIPEGAESLDSLYDKGVRAVERL
DVQNCVQLLRRCVIALGIMDCSVMMSLKAVKIEDEKQVDMAESMSVQGPD
VAGTLQTADGRWVAYCVSVVDAGPKPPTKLSTKPKHEHKIWDFWASREEA
TKIA*
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mRNA from alignment at H-elongata_contig12867:491..3465+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12867.2108.1 ID=mRNA_H-elongata_contig12867.2108.1|Name=mRNA_H-elongata_contig12867.2108.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2975bp|location=Sequence derived from alignment at H-elongata_contig12867:491..3465+ (Himanthalia elongata Himel1 dioecious)
GACAGCATCGACCACCTACGGCCTGCGGGGCGGACCACGAGAGACTCCGG GCACTGGTCACCCGCGGCGCAGCTCGAGCCCAACAAGACCGACTTCTGGC TCGACCTCCCAATGGGCTTCAAGGACGTCTGCGAAAACACCAATGAAAGC GAGGTGATCGCAGTGGAGGTCAAGCCCAAGGGCGCCGTCATGCCCGTCGG CAGCCTGGTTCCTCCTGGAAATAACCGTCTGAAGCACCGGGTATGGAGAT TCGACGCTCAGCAGGATTTCAAGGCGAACAAAGAGCAGTCCTGGGGCTCG ATCGACCGTCCTTGTCTCTACCATCCGAAGGAGTTCTACTCCGGGGAGCC CGCGCGCGCGGCCGCGGCCCTCAAAGAGCTCATGAAAGCGCCTCAGAACA AGCTGCGCGCATGGGAGAACGGAAACATGATTTTTGGAGCGGGTTCCGGG GAAGGCGGTGACCACGTTCTTGACCTTGCGAGGGCTGTCGAAAAGGCTGG CTTGGGCACCGGAGACGGGTGCGTTCCCCCCCCCCCCGCGTCTGTTTTTG GTTGCGTGAGGAACTCTGACCAGATGCTGTGAGGGAGGGGGATGGTAGAG GCTTGATCCCCTGGAGATCGCCGGATATCACTCTGAAGATGATGTTCTGT CGACTGGACTGACTTCTAGGCGTGGTGGAGTATGTGTTTGTTAATATCCG GTTGAATATGCCGAACTACGAGTTGAAATGTGATTTCTCACGAGCGCCTC GCTTTTTTTACAGGAAAGGCAAGAAGCGATTCGAAACATTTCCGTCCTGC GCGTGCATGTCCGGCCAGCCCCTGCTGCGACTCTCTCGAGAACCCATGTG CAGCAGTATTTTTCAGTGTCTCGCGCCATAAGAAGGCGAGAAAGGCACGA ACCCCCCTCATATTCCACCTCTTGCTCTCCTCTGGTCACGCCTGCCCGGG GAATCTTGACAGGAAGGAACCGGCGGGAGCGCTAATGGATTTGATTGGCG AAATTTTGGCGAGGGAATCGCTGGTGTCACACCTTGTGGCAGGCCAAAGG TTGGACGTGCTGGAGATCGAGGGCGGCGGGCTCGTGTTCGACAAGTTCGT GTCTCTCTGCGGAGGCTCCGAGTAAGAGCGCGTTTGGTTTGCGCGGTGCC GTGACGTGCGTCGAACAAAGCCACGAATGCAACCAGTGTGTATCATCAAA GACCGCAGAGATCTCGTCTGACTGATGCTTGCACAATCGTGAGATGTACT TCATGTCACAGGTAGACAAAACCTTCAATACGAGAGTGCCGTGTGATCTT TGTGTGACTCGTGCAGGGACGCGGCGCTGTCAATGCTTGAAGACCAGCAG GCCAACCCTTTTGAAGCTCTGCCTCCGGACGCCGACTTAATCGTCCCTGA GGAGACTCTTGCCGCCCTGAGGGCGGGATCGGCGATTCCCGAGGGAGCTG AGAGCCTCGACTCCCTTTACGATAAGGGTGTCCGCGCCGTCGAAAGGCTA GACGTGCAGAACTGTGTGCAGCTTTTGAGGAGGTGCGTCATCGCGCTGGG GATCATGGACTGCAGCGTCATGATGTCGCTCAAGGCGGTTAAGATCGAGG ACGAAAAACAGGTGGATATGGCGGAATCGATGTCGGTTCAGGGACCTGAC GTGGCGGGCACGCTCCAGACCGCGGACGGACGGTGGGTGGCATACTGCGT GTCGGTGGTGGATGCAGGGCCTAAGCCCCCAACCAAGCTCAGCACGAAGC CCAAGCATGAGCACAAAATTTGGGATTTTTGGGCATCTCGAGAAGAGGCT ACGAAAATAGCTTGAAGGAGGCGTACGTCCCGTCGTACTGCCTCGGGGTA TGCCAGGATAGCTATTTTTAGTGCATTAAATGGCGTGCGTGTATATGTGT GTATTTTTCTTACAAAAAACATGAAATCATTCCAACCCTCCGAATACCCA CGCCTTTTTAGTACCGTGAGAGGTGCCGTCCAGGGGACCAACTATCGTCA GGTTCGAATGTGTACATTACTACCTTTGAGCACAAAATCGTCACATAGTA TTAATCGTGTTCCCGAATCGTAAATTCATCGGGTCAATGGTGTAATGTCG GGGATTCCATAGTTATCCCGTACACTTACAGTACATAATTCGTCATGTGG GGACTATGACGACAAACCAGAGTCTAGAGAGTGAAATGTAGTTAGGAATG ATTGTTATGCATATAGGTAAATGAGAGGGGGTGCGGGATATTAAATTGCA TATAACCGCGCAATCCGGCCCTGTCATGGTAAGTCCTTCTAGGCTACTCT CGCATTGATCCTCCCAATGGGGGATCGTGTTTATGTCTTGTGTATTTATT AAATTGCACACCCGCGCGATCCGGGGCTGTCCTGCTAGCTCTTCTAGGCT ACTGCAAGTAACCCATCCAGGGTTACTTTTCGTGGACATAGTTTTTGCTG GAAATGCGCATGATGCATCCAGCGATAACTCGTGTTTGTGTGTGTGTTTG TTATTTAGTATGTCTGTATTTTAAAATTGTGGGTGTGCATGTGCGCACGG GGGCGGTGTCGATCATTTTTTGCATTGACGCGTCGGTCAAGCGAAGTTTT ACGGACAAAATGAATTACAAAGTTCTACGAGTGTTGGAAGATTTCGTTCA TCCCCTATCACTAGTACCACAGATGAGAGTCGCCCCTATATGAAACGGTA TTGTTTTGTTGCGAAGATAGGCGGAAGTATGGGATACGCCGTTGCCAGGC CATTAGTGGTTTGTCGTACATAATTTTGGAGAAAATTGCCGTCGATCGCG CTGCGTATCCGATTGCTTGGCACCGTTCGTTTTATTTCGAGGCAAAGACA AGGTGTCGGTTCAGTCAAATACAGTCTGTGTGGTACGATAACGTGCACAG CAGTCGCCTCGCCTGGTGGTACAGGTAAAACTACTGTTAAATAATCTAGG ATACTCTAAATCCTAAGGGAATATT
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Coding sequence (CDS) from alignment at H-elongata_contig12867:491..3465+

>mRNA_H-elongata_contig12867.2108.1 ID=mRNA_H-elongata_contig12867.2108.1|Name=mRNA_H-elongata_contig12867.2108.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2130bp|location=Sequence derived from alignment at H-elongata_contig12867:491..3465+ (Himanthalia elongata Himel1 dioecious)
ATGGGCTTCAAGGACGTCTGCGAAAACACCAATGAAAGCGAGGTGATCGC
AGTGGAGGTCAAGCCCAAGGGCGCCGTCATGCCCGTCGGCAGCCTGGTTC
CTCCTGGAAATAACCGTCTGAAGCACCGGGTATGGAGATTCGACGCTCAG
CAGGATTTCAAGGCGAACAAAGAGCAGTCCTGGGGCTCGATCGACCGTCC
TTGTCTCTACCATCCGAAGGAGTTCTACTCCGGGGAGCCCGCGCGCGCGG
CCGCGGCCCTCAAAGAGCTCATGAAAGCGCCTCAGAACAAGCTGCGCGCA
TGGGAGAACGGAAACATGATTTTTGGAGCGGGTTCCGGGGAAGGCGGTGA
CCACGTTCTTGACCTTGCGAGGGCTGTCGAAAAGGCTGGCTTGGGCACCG
GAGACGGATGGGCTTCAAGGACGTCTGCGAAAACACCAATGAAAGCGAGG
TGATCGCAGTGGAGGTCAAGCCCAAGGGCGCCGTCATGCCCGTCGGCAGC
CTGGTTCCTCCTGGAAATAACCGTCTGAAGCACCGGGTATGGAGATTCGA
CGCTCAGCAGGATTTCAAGGCGAACAAAGAGCAGTCCTGGGGCTCGATCG
ACCGTCCTTGTCTCTACCATCCGAAGGAGTTCTACTCCGGGGAGCCCGCG
CGCGCGGCCGCGGCCCTCAAAGAGCTCATGAAAGCGCCTCAGAACAAGCT
GCGCGCATGGGAGAACGGAAACATGATTTTTGGAGCGGGTTCCGGGGAAG
GCGGTGACCACGTTCTTGACCTTGCGAGGGCTGTCGAAAAGGCTGGCTTG
GGCACCGGAGACGGGAAGGAACCGGCGGGAGCGCTAATGGATTTGATTGG
CGAAATTTTGGCGAGGGAATCGCTGGTGTCACACCTTGTGGCAGGCCAAA
GGTTGGACGTGCTGGAGATCGAGGGCGGCGGGCTCGTGTTCGACAAGTTC
GTGTCTCTCTGCGGAGGCTCCGAGAAGGAACCGGCGGGAGCGCTAATGGA
TTTGATTGGCGAAATTTTGGCGAGGGAATCGCTGGTGTCACACCTTGTGG
CAGGCCAAAGGTTGGACGTGCTGGAGATCGAGGGCGGCGGGCTCGTGTTC
GACAAGTTCGTGTCTCTCTGCGGAGGCTCCGAGGACGCGGCGCTGTCAAT
GCTTGAAGACCAGCAGGCCAACCCTTTTGAAGCTCTGCCTCCGGACGCCG
ACTTAATCGTCCCTGAGGAGACTCTTGCCGCCCTGAGGGCGGGATCGGCG
ATTCCCGAGGGAGCTGAGAGCCTCGACTCCCTTTACGATAAGGGTGTCCG
CGCCGTCGAAAGGCTAGACGTGCAGAACTGTGTGCAGCTTTTGAGGAGGT
GCGTCATCGCGCTGGGGATCATGGACTGCAGCGTCATGATGTCGCTCAAG
GCGGTTAAGATCGAGGACGAAAAACAGGTGGATATGGCGGAATCGATGTC
GGTTCAGGGACCTGACGTGGCGGGCACGCTCCAGACCGCGGACGGACGGT
GGGTGGCATACTGCGTGTCGGTGGTGGATGCAGGGCCTAAGCCCCCAACC
AAGCTCAGCACGAAGCCCAAGCATGAGCACAAAATTTGGGATTTTTGGGC
ATCTCGAGAAGAGGCTACGAAAATAGCTTGAGGACGCGGCGCTGTCAATG
CTTGAAGACCAGCAGGCCAACCCTTTTGAAGCTCTGCCTCCGGACGCCGA
CTTAATCGTCCCTGAGGAGACTCTTGCCGCCCTGAGGGCGGGATCGGCGA
TTCCCGAGGGAGCTGAGAGCCTCGACTCCCTTTACGATAAGGGTGTCCGC
GCCGTCGAAAGGCTAGACGTGCAGAACTGTGTGCAGCTTTTGAGGAGGTG
CGTCATCGCGCTGGGGATCATGGACTGCAGCGTCATGATGTCGCTCAAGG
CGGTTAAGATCGAGGACGAAAAACAGGTGGATATGGCGGAATCGATGTCG
GTTCAGGGACCTGACGTGGCGGGCACGCTCCAGACCGCGGACGGACGGTG
GGTGGCATACTGCGTGTCGGTGGTGGATGCAGGGCCTAAGCCCCCAACCA
AGCTCAGCACGAAGCCCAAGCATGAGCACAAAATTTGGGATTTTTGGGCA
TCTCGAGAAGAGGCTACGAAAATAGCTTGA
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