mRNA_H-elongata_contig12789.2056.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12789.2056.1
Unique NamemRNA_H-elongata_contig12789.2056.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.010e-73
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 QANDVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFAAAPGKVEASA---GGGAGL 399
            +ANDVGANLF+GQLDPDVDEKMLYDTFS FGFITQTPKVMRDPDTG+SKGYGFVSYDGFEASD AIECMHNQYLCNRQISVQYAYKK++RGERHGGQAERLLA+NNPSKFKVHTLF+ APGK+E SA   GG  G+
Sbjct:   93 KANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 228
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.480e-72
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 1 
Query:    1 QANDVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFAAAPGKVEASA---GGGAGL 399
            +ANDVGANLF+GQLDPDVDEKMLYDTFS FGFITQTPKVMRDPDTG+SKGYGFVSYDGFEASD AIECMHNQYLCNRQISVQYAYKK++RGERHGGQAERLLA+NNPSKFKVHTLF+ APGK+E SA   GG  G+
Sbjct:   93 KANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM 228
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.680e-57
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 1 
Query:    1 QANDVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFAAAPGKVE 372
            +A DVGANLF+GQLDP+VDEK+LYDTFS FGFIT TPKVMRDP+TG SKGYGFVSYDGFEASD+AIECM+ Q+LCNRQI VQYA+K++S GERHG  AERLLAANNP + K HT+FA+  G+V+
Sbjct:   93 KAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFASQEGEVQ 216
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI)

HSP 1 Score: 187 bits (475), Expect = 1.270e-52
Identity = 87/122 (71.31%), Postives = 102/122 (83.61%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFA----AAPG 363
            DVGANLF+G LDP+VDEK+LYDTFS FG I +TPK+MRDPDT  SKG+GFVS+D FEA+D+AIECMH QYLCNRQ+ VQYA+KK+S  ERHG +AERLLA  NP+K K HT+FA    AAPG
Sbjct:   96 DVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPG 217
[Close]
BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A6G0WNH8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNH8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.630e-52
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFA 351
            D+GANLF+G LDPDVDEK+LYDTFS FG I +TPK+MRDPDT +S+G+GFVSYD FEA+D+AIECM+ QYLCNRQI VQYAYKK S  ERHG QAERLLA++NP+K K HT FA
Sbjct:   99 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKVSRGFGFVSYDSFEAADLAIECMNAQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKMKPHTRFA 212
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN)

HSP 1 Score: 189 bits (479), Expect = 3.030e-52
Identity = 90/130 (69.23%), Postives = 106/130 (81.54%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFAAAPGKVEASAGGGAGL 399
            +VGANLFVG LD DVDEK+LYDTFS FG IT+TPK+MRDPDTG SKG+GFVSYD FEASD+AIECMHNQ+LCN+Q+ V YA+K++S+ ERHG QAERLLAANNP   K H +F   PG  +A  GG A +
Sbjct:   97 EVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMFGTGPG--DAMGGGYAAM 224
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A3F2RG69_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG69_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.260e-52
Identity = 84/114 (73.68%), Postives = 100/114 (87.72%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFA 351
            DVGANLF+G LDP+VDEK+LYDTFS FG I +TPKVMRDPDT +S+G+GFVS+D FEA+D+AIECM+ QYLCNRQ+ VQYAYKK+S+ ERHG +AERLLA  NP+K K HTLFA
Sbjct:   96 DVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKVMRDPDTKLSRGFGFVSFDSFEAADLAIECMNGQYLCNRQVVVQYAYKKDSQNERHGSEAERLLAQRNPNKLKPHTLFA 209
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BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A6A4C3Q0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C3Q0_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.050e-51
Identity = 83/118 (70.34%), Postives = 100/118 (84.75%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFAAAPG 363
            DVGANLF+G LDP+VDEK+LYDTFS FG I +TPKVMRDPD+  S+G+GFVS+D FEA+D+AIECMH QYLCNRQ+ VQ+A+KK+SR ERHG +AERLLA  NP K + HT+FA  PG
Sbjct:   96 DVGANLFLGNLDPEVDEKLLYDTFSAFGGIVETPKVMRDPDSQASRGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQFAFKKDSRNERHGSEAERLLAQRNPDKLQPHTMFAFTPG 213
[Close]
BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: W4GDM5_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4GDM5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.100e-51
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFA 351
            D+GANLF+G LDPDVDEK+LYDTFS FG I +TPK+MRDPDT +S+G+GFVSYD FEA+D+AIECM+ QYLCNRQI VQYAYKK S  ERHG QAERLLA++NP+K K HT FA
Sbjct:   98 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKMSRGFGFVSYDSFEAADLAIECMNTQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKLKPHTRFA 211
[Close]
BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Match: A0A484EDR7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDR7_BRELC)

HSP 1 Score: 184 bits (467), Expect = 1.710e-51
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 1 
Query:   10 DVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKGYGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAERLLAANNPSKFKVHTLFA 351
            DVGANLF+G LDP+VDEK+LYDTFS FG I +TPK+MRDPD+  SKG+GF+S+D FEA+D+AIECMH QYLCNRQ+ VQYA+KK+S  ERHG +AERLLA  NP+K K HT+FA
Sbjct:   96 DVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDSKASKGFGFISFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQTNPNKLKPHTMFA 209
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12789.2056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI11_9PHAE1.010e-7386.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT41_ECTSI3.480e-7286.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPU5_9STRA4.680e-5775.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0W8D7L6_PHYNI1.270e-5271.31Splicing factor 3B subunit 4 n=11 Tax=Peronosporac... [more]
A0A6G0WNH8_9STRA2.630e-5274.56Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
F0YAQ8_AURAN3.030e-5269.23Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A3F2RG69_9STRA8.260e-5273.68Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6A4C3Q0_9STRA1.050e-5170.34Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
W4GDM5_9STRA1.100e-5174.56Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A484EDR7_BRELC1.710e-5171.05Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12789contigH-elongata_contig12789:77..8414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score247.7
Seed ortholog evalue1.1e-62
Seed eggNOG ortholog2880.D8LT41
Preferred nameSF3B4
KEGG koko:K07951,ko:K12831
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0030532,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032991,GO:0033120,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0045935,GO:0046483,GO:0048024,GO:0048026,GO:0048518,GO:0048522,GO:0050684,GO:0050685,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1903311,GO:1903313,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG0131@1,KOG0131@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko03041,ko04031,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size1383
Cds size1383
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929758.8589923-CDS-H-elongata_contig12789:76..4581622929758.8589923-CDS-H-elongata_contig12789:76..458Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 77..458 -
1691679146.752542-CDS-H-elongata_contig12789:76..4581691679146.752542-CDS-H-elongata_contig12789:76..458Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 77..458 -
1622929758.8743196-CDS-H-elongata_contig12789:617..6601622929758.8743196-CDS-H-elongata_contig12789:617..660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 618..660 -
1691679146.7621632-CDS-H-elongata_contig12789:617..6601691679146.7621632-CDS-H-elongata_contig12789:617..660Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 618..660 -
1622929758.8962874-CDS-H-elongata_contig12789:726..9721622929758.8962874-CDS-H-elongata_contig12789:726..972Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 727..972 -
1691679146.770167-CDS-H-elongata_contig12789:726..9721691679146.770167-CDS-H-elongata_contig12789:726..972Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 727..972 -
1622929758.9101408-CDS-H-elongata_contig12789:1429..16971622929758.9101408-CDS-H-elongata_contig12789:1429..1697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 1430..1697 -
1691679146.779906-CDS-H-elongata_contig12789:1429..16971691679146.779906-CDS-H-elongata_contig12789:1429..1697Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 1430..1697 -
1622929758.923415-CDS-H-elongata_contig12789:3104..32571622929758.923415-CDS-H-elongata_contig12789:3104..3257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 3105..3257 -
1691679146.791956-CDS-H-elongata_contig12789:3104..32571691679146.791956-CDS-H-elongata_contig12789:3104..3257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 3105..3257 -
1622929758.941233-CDS-H-elongata_contig12789:4073..41911622929758.941233-CDS-H-elongata_contig12789:4073..4191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 4074..4191 -
1691679146.800895-CDS-H-elongata_contig12789:4073..41911691679146.800895-CDS-H-elongata_contig12789:4073..4191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 4074..4191 -
1622929758.9603276-CDS-H-elongata_contig12789:8241..84141622929758.9603276-CDS-H-elongata_contig12789:8241..8414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 8242..8414 -
1691679146.8089337-CDS-H-elongata_contig12789:8241..84141691679146.8089337-CDS-H-elongata_contig12789:8241..8414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12789 8242..8414 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12789.2056.1prot_H-elongata_contig12789.2056.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12789 77..8414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12789.2056.1

>prot_H-elongata_contig12789.2056.1 ID=prot_H-elongata_contig12789.2056.1|Name=mRNA_H-elongata_contig12789.2056.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
QANDVGANLFVGQLDPDVDEKMLYDTFSGFGFITQTPKVMRDPDTGISKG
YGFVSYDGFEASDMAIECMHNQYLCNRQISVQYAYKKESRGERHGGQAER
LLAANNPSKFKVHTLFAAAPGKVEASAGGGAGLAPAAPSSPPPPSRPPGS
VPPLPPGMPPPPPPPPTPGMPPLPPSSTQPNTPRQWSSGGGPPPPPQGGM
MPQGMRPPPPPGYGGGGGGFSPHMLPPHQHQHQHMMHGGGFRHGMNTRNG
GGGGGRRPQMMGGMPPPPPPPSMNNMGRPPPLPPAGRNPQQSMPPPPPPP
PPLPLSASPSANGGPAGQHRQGANHPPPPPPPTVGQNDLVGGGGNISTMP
LPPPPPVSVPLPPGGLGSGPGSNRPGMPPPPPPPMGRGGSGGGNMGTANR
ERGPGGGMLPPPPPPHQQQQGMGGPPLFQQQQQERAMGRGPPPMLMPLPP
GRGNGPDNAQQ
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mRNA from alignment at H-elongata_contig12789:77..8414-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12789.2056.1 ID=mRNA_H-elongata_contig12789.2056.1|Name=mRNA_H-elongata_contig12789.2056.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8338bp|location=Sequence derived from alignment at H-elongata_contig12789:77..8414- (Himanthalia elongata Himel1 dioecious)
CAGGCGAACGACGTCGGCGCGAACCTTTTCGTCGGCCAGCTGGATCCAGA
TGTGGACGAGAAGATGCTATACGACACCTTCTCCGGGTTCGGGTTCATCA
CACAGACGCCCAAGGTCATGCGCGACCCGGACACGGGCATCTCCAAGGGC
TACGGCTTCGTTAGCTATGACGGGTGAGAGGGGAAAGGGGGAAAGGAGAG
GGACGCACCTGTACGCGCGTGTGTTGGTATGCGGAGCGTATCCCAGGCTC
CACGCTTACAGCGTTTTTTTTTTTCCTTCTTCCGGCGTTAGAGGGTCTAT
TCCGCCCTTATGTGGTACTGTACTAAATATTACAAGGTTTATATATATCG
ACATATTACAGTGAGTATATTTGCTGGACTGGCGGGAGGAAGTGGGAGCG
TGGGGGTTTCCATGCGGAGTGTTCGGCTGTATATCTAAAATATGTAAATC
CCGTGCTATCGTACTATCCCATGTCTTCGGCCGCTGGGATCGGTAGCACT
CTCGAGTACGGGGGATTTTTGTTTTTATTTCCCTCCCCGCGGAGTAGGCT
TTTGTGTGACAGTTCAAACCCCGCTTGCTTACAATATATAGTATTATAGA
ACATGTTCCAGAGATGTTAAATGTAAATACTCGAATGAAATAGTGTATTT
TTTTCCCCAAGATGTGCGTATTTGTTTTTGTTATTTTAGTATTTTTTTTG
TTTTTTCCCGCCATTATTTTTATTTAAAAAAAAAACATGAACTCATTCCA
ACCCTTCGAACATCCACGCCTTCTTAGCACCATGAGAAGTGTAGTCCAGG
GGACCAACTATCGTCAGGTTAGAATGTGTACAATACTAACCTTGAGTACA
AAATCTTCACACATGATATGTCGTACAAGTTCCATTGGTACGTGAGCTAT
GGAATTATTAGAGGGAGGGGGCTAAAGGCAGGAAGTAAGAGTAAGCAATA
AAAATGATAATAATAATAATGTTAATGTTAATGTTACTAGTATATAAATA
AGTAACTGTAGTATACTAGAGGCTAAAATGTAATTAGACTTAGGCAAAAA
ATAATATGTTGATCAGTAAGAGGAAGTTGATTGCTCATGAAATGTCTCGG
TTGAGGGTTACCATATATAGGGCTATATATATCTCTAAATATAATTTGAT
TATATTTATTAGAGGCCTATGAACTCATTGCAACGACTAGGAAGACAACT
AAAACTATTATTATTATTATTATTACTAATATTATTATCATTATCATGAT
TATTACTATTATTATTATTTTTATTACTATTATTATCATTATTATTATTA
TCATTATTACTATTATTATTATTACTATTATTATCATCATTATCACTATT
ATTATTATCATTATTATTATTATTAATAGTGTGACGTTACCCATCCCCTC
CCTTCCAGATGCACGCCTCCCCACTAATGTTTCTCGTGATGCGAGCTATT
ATATGAGCTATTAACCCTTCTGGAACTGGATTTCAAGTTTTATATTGAAT
TTAGTATATAACAAAAAAACAGATCGAGTTCCATAGGGATTAAGAAGCGT
TTCAAACGATTCTATTTATTTGTTTTTTATTGAAATCTAAGACTTAAAAT
TAATGTATATATATATATACCCAAAAATACAGTCCGCTTTGAAGATTTTT
TTTAAACGAAGAGACGGCGGAATTCAAAGGAGACTGATCTGCTTGCACCA
GCAACACCTCAGTAGCAAGCCTCTTTTCCCACACGCCCAAAGCGAGGCTG
CACCAAGCGGCATCAGAAGATATGGTCATGAACCAGAGCAGCACTTCCCG
CCCGAAGCGCACGCAGACCCTGCCAATCAGACTGAGTGTGGGTAGGGAAC
CAGGGGCTGCCACAGGCTTCGGCACGAGCATCATGTCCAGGTCGGCGCCC
GAGCAGCCAGCCCTTCATTCTGCCGTTGCTGTTGGTGTTACTGCCGCTTC
TGCTGCTGGTTCTGCCGCCGCGCAACCGGTAAGCTATGTATCAATGGCCA
GTTCCGCGCGAGGCACACAGCAGCAGGTGCAGGCCGTCCGGTCCCCCCAT
TCGACGAGCCATGTTCAGGCCGTCCAGAGGCTGCGCTGCTTCTCACGGTT
TCCTATCAAGTCTGCGTGCTGTGGAGATTGTGTGTCGGTGCTGCAAGGGC
CTCCCACCCCTTCTGGACTTGCTGGTCAACTTAAATTAAAAATTTTAACT
GAAATCAACAGCCTAGGAAAAAAAACGTGCTTGTTCAGTTCAAATTGAAT
TCTGTGCGTATGAAGGCGTCGGTCAATTAAAGTTGAAAAAAAAGCAATTA
AAATTCATCGTTTGAAACGGTCCTAAACAGCGCCCACCCCTTCCACCTTA
TTTTAGTACAAATATACATACTAATACTAATGTTACTGCTAATGCGCCTC
CCTATATATATATTACACGATGCGAACTATTTACGGCGCACCCCTTTTAC
CTTATATTAATGCCAATATTAATACTAATACTATACTCATTAGAATACTA
ATGCTAATACTAATAATAGATTATGATACTGTACGAGACTAATTCTAATA
CAAAACTAATTTATAATGCTACTACCAATAATATACTAATTATAATGCCA
ATACTAAAACGAGCCATCCCGGTGGGATATCAAAGCCATTCCTGACGTGC
TTACCATTCGACTTTCTAGATATACCTCGTACGTAATTCTTAGTAATTAA
CTTGTAGGAGTTGGCTATACTTGGATTCTCATATCCGCATGATCCTTGCT
ACACTATCTTAATACACTATACACTATCTTAATACACTATACACTATCTT
AATACACTATACACTATCTTAATACACTATACACTATCTTAATACACTAA
ACACTATCTTAATACACTATACACTATCTTAATACACTATACACTATCTT
AATACACTATACACTATATTAATACACTATACACTATCTTAATACACTAT
ACACTATCTTAATACACTATACACTATATTAATACACTATACACTATATT
AATACACTATACACTATATTAATACACTATACACTATATTAATACACTAT
ACACTATCTTCTGCTATTAATAGATTTGATTGCCATGACTGCACATACAA
GATTTCTCTCGATATACTTGACCTGAATAGTGCCCGCTAGCTTATCAGTC
ACCAATTTCATATACACCACTTTCCTAGAGAGGATAACAGTAACAGTAAC
GGTAACGGTGGGTGAGGGGTGAGCAAGGACACGTTAAGCCCTTTTGTAGT
AATGCTAATATCTCTAATAACTCTTACCATTATAGTCCACTAATGGTTAC
CTCACACAGTCGTAGCCCAAACCCAAACGGTAGTTGCTACCGACAGCGAA
CCTCGGGAAAACAGGGAAATCCATGTAGTCCCCTGTTTCCCGGGGTTTCT
TAGTGGGTTGGAGGACTCCGCCACCGTACGACAGAAGAAGTCCCCCTTAG
GAGACGCCCCGTGTGACGATTTCGCACACCCTATAGTCTTCATATCCAAT
AGACATCTCCACTAGACATAATGTAAACAATCAAGAAGGGAGAGTAAGAG
AGGGGGGCAACTCCCGCTCGCCCCCCCCACCCCATCCGCCCGCCCGCCTC
CACTTGTTATTTTGTTAACGCGGGAGAGTGGAGTGGGTGACATCACACTC
GTACGCATCCACCCGTTTCTTTTCGTTCAAAGACGGAGCTGGTTTATAGA
GGTGGGTCGAGTCGGGTAGTTGGGTTGGAGGTGTTTGACCGTCGTCTCCG
CCTCCTCCTAGCTGGATATTTTGATATTTTTTGTTTTGAAATTTGGGTTG
TTGTTGGGAGGGGGTGGTTAACCTATAAAATGTGTTGATGGTGTGGTATG
CTTTTTGTGTGTGTATTTATTAAATTGCACATAACCGCGCAATCCGGCCC
TGTCGTCCTAGTCCTTGCTTTTTCTTTACACCACTCTTGAGCTGATTTCA
AAACGTTTCGTTATAAATTGATGTATTTTTTTTCATCGGCTTCTCAACAA
AATAAGAACGAACAACAACAAAAATGGCCAAAATAAGCTGGCGTTGTACA
ATATCATGTTTCGTTTTGTCTCTCCCCTTCAATATAATATAAATACTACG
CCTCCCCTCTTTTGCCCTTTTTTTACCTCTCTCCTCTCCAAAATGTGTCG
ACTGATTATCTGAAACGTGTTTTGCCACGCTGCGCGGTCGGCTGTTGAAC
GGGTGGGAACACTCTCTGGACAGGTTCGAGGCCAGCGACATGGCGATCGA
GTGCATGCACAATCAGTACCTGTGCAACCGTCAGATCTCGGTGCAGTACG
CCTACAAGAAGGAATCTCGGGGAGAACGGCACGGAGGACAGGTAGACATG
CACAGATACAGCCGCGGTCCGTGCTATAATCTGGTCAACATAGTACACGG
TACACTATTGCGGCTGCGGCTGCGAAATAAAGCACGCTGCAGACGGGACG
GGACGGTGGTAGTGGTATGGAGTAGTAGTACAGTGTAGTGTAGTGTAGTA
AGTTACTGTGGAACAGTGGCAGCGGCAGAGGAGGCGTTGTCGGAGGGGGA
AAAGAGGGAGGGGACACCATGGATCTAGCTTTTGCGCTGCGGGGACATAG
GCGACAGTCTTGTCTCTCTATCGATGTGTGGTTGATTCTCTGTTCGATGG
TCGCCGTTAGATGCGGTTAGATGCGGCTCACTTTGTCATCTCCCCCCTCC
CCTCTCCCGACCCAGCATCTCGGTCGATGCTTTACGGCTAACGATTCCCG
TCCCCTCCTCTCTTCCACCGGCCGCTACTGTACCTCCCCCTTCTCTCCTG
TCTCGCTTAGGCCGGAGCCGGGTCTTATCGGAATACAAAAACAAAAAACA
AAAAAAAAATCCAGCCAATTTAAATTAAAATCGGGCTGAGATTGGTCGAA
AGCTAAATAACGCCTAGCGTTCGTCCAATCAGAGCCCGATTGAAATATAC
ATCGGCTGGAATCAATATCCACCCTTCGTTGATGATGATAACAATTTACT
TGTGTTAAGTGTGTGCTAACTTAATTAAGTGTTAAGTGTTCCCTCTAGCC
TTCTAGCCGTCTAGCCGCTCATCAAAACGTTGCTACTGCTGCTTTTGCGG
ATGCTTCTGCTTCTGCTTCTCTCCGCTTGACACTTTTGATACTGGTACTT
GCTTCAGGCGGAGCGACTCCTAGCCGCGAATAACCCCAGCAAGTTCAAGG
TCCACACCCTATTTGCCGCGGCTCCCGGAAAAGTAGAGGCCTCGGCCGGA
GGAGGGGCCGGCTTGGCGCCGGCAGCGCCTTCCAGCCCCCCCCCCCCCTC
CCGCCCCCCCGTGCCCACCCTCCCCCCCCCCCCCCCCATCTATCTCTCTA
GAAAATACCTCTATTTTCTTTTCTTTTGCTTAAGTTTTTCTGTTTCGTTT
TTTTTACTGGAAAGTTCCCTTTCTTTTTGCGTAATATACGTTGTATGTGT
TATATGCTATGATATAGGCCCTAGATGGGAATTTGTAAAATCCTCTACTA
CCGTCTACTACCGTATGTTCTAACCGTGATGACGATGGCAATGGCGATGG
CGGGAGGTGGTTCGACCATTGATTGCTTGGTGGCGAGGCGTGTAGGCTTT
GTGCTAAACTACCATGTACTGCATTGCGATTTAAACGGAAGAATCGTAGG
CGTGAACTCGGAGAGTGGGGGGTAGGGCTGGATAAGATCCCTTAGGTCCG
CAGGCCATGGCGGGATAAGCAATGTGGGCGCGCCTATTTATACCCCATGG
GTGTTTACGCCAAACCACCACCCCAAGCTCTTAATTTCTTATAATTATCT
ATAATTAGCAATATATATATATGGTGATTTCATGCTAACTAAAACATCGG
TCCCTCTGAAAGATATATCTGTAGTCAATTTTCGTGGTAGCAGGCCCGCA
GCTGTAGCAGCTGTAAATTTTGATTTGGATGTGGGTTATGGTTACGGTTA
CGGTTGGGTTCACCAAAAACTTGAGAGCCACTACTTCAAAGTAAGAGTGT
GTCGATCAAAAAAAAAATGCTTAGGTGGTGGTTCGACGTAAACACCCATG
GGGTGTAAATAGGCGCGTCCAAGTAACGTTGCGGTAGGTTGGTGGGATTG
GCCACTATTAATAGCCTATTATAGGACGTTGAGTGACCTTTTACCCCATC
GCGGAAAATATTTAGATTGCCCTCCCAAACCAAGCGACATATCTCCCATA
TGCCACTGTCAGCATCGAGATAGGTGTTTGTACTGTGCTGTGCCGTGCTG
TGCTCGAGTGTAGGGTACTGTCGTGTTGTTACTAGTTAGTTTTATTAGGG
TGTGGTGGCACGTCCGATCGGTTTACCATTGGGTAACACGATTAGTGACT
TAGTGACATGTATGTGGCGATTTCGTTCTCAAAGATTGTGTGTAATAACG
CAATGATTTGTTGTTCTCCTAGTATAGTATAGTATGGTATGGTATAGTAT
AGTAGTATAGTGGTATAGACTTTCACCCCTGACGATGATAATGGTGCAAA
GAAAGTCGTGGTTGATGTTTGAAGAATTTGGATTGAGAGTTCATTGGGGG
GTTTCGATCGAAAACATAACGACGGGAAGGTTAAAAAAAAGTGTTTACAG
TACCACTAAACTCTTCTCTGTCGTTGCTGCTGCTGCTGCCGTTGCTGCCT
TCAATGATCTTGCTTGTGACGTATTGGGGGTGGGGGGCGTATCCTTTATT
TCAATCCGACTGCCCAGGGTTCGGTGCCGCCACTCCCTCCGGGGATGCCC
CCGCCTCCGCCACCGCCGCCGACCCCGGGGATGCCGCCGCTACCCCCCTC
ATCGACGCAGCCCAACACGCCCAGGCAGTGGTCGTCCGGAGGGGGGCCGC
CTCCACCACCGCAGGGAGGCATGATGCCCCAGGGGATGCGTCCGCCGCCG
CCCCCTGGGTACGGTGGCGGTGGTGGAGGATTCTCGCCGCACATGCTGCC
GCCGCATCAGCATCAGCATCAGCACATGATGCACGGTGGCATGGGGAGGA
ATATACCGCCACAGCACAGCGGCATGGGCGGGCACGGGCACGGGATGGGC
ATGCCACCGGTAAGAAAGTGTGTATCTGTGTCTGTGTTTGTGTGTACGTG
CTTGTACGGGAGATCCAATGTGATCGCGGGGTTTCGTGATCGCGGGTGAG
CATAGTGTTTGTATGTGTGTGTGTCTGTCTGTCTGTCAGCAATGCTCTCC
TTTTTTGAGCGTGCGCGCTTGTTCCCTTCTGCTTGAACGGAACAGGATGG
GATGTGGCACGGTGATGAATGGTGTTTCCTACGAAACGCGCACCCACAAC
ATGTGCTTGATACGGCTTCCAAGGGGGTGGTGGGGGGAGGGGGAGTCGGA
TTGTTTGTCAAAACCCTAAAATAACGATAACCAAAACCCCTTTTGCGGCT
GTGGTGTATTTTTTCGCGACAACCAAATCAAATAGCAAAGAGGTGGTGGC
TTCAGACACGGAATGAACACGCGAAATGGAGGAGGAGGAGGAGGAAGACG
ACCCCAGATGATGGGGGGCATGCCTCCGCCGCCGCCGCCGCCTAGCATGA
ACAACATGGGTCGCCCGCCACCGCTGCCGCCCGCCGGGCGGAACCCTCAG
CAGTCCATGCCCCCTCCCCCTCCCCCCCCTCCGCCGCTGCCGCTTTCGGC
GTCACCCTCGGCGAACGGCGGCCCGGCAGGACAACATCGTCGCCACGTAG
AGGGAAACGGCCCAATAGTAGGAGGAGCGCGGGGAGCGCTAGGGCAAGGG
CAAGGGCAAGGGGCAAATCATCCGCCGCCGCCTCCGCCCCCTACAGTGTC
CAGTCGCGACGAGGGAGGAGAAGCTCGGCAAGAGCATGGAGGAGGCCCCG
CGGTGCCTCCCACCCACCACCACCATCAAACACCCCCCCCGCCCCCGCCG
CCGTCGCAAGCGATGTTGCAAAAAAGAATGCCTCCCAGCGGCGGCGGCAG
CGGCAGCGGCCAAAATGACTTGGTGGGTGGAGGTGGAAATATTAGTACCA
TGCCGCTGCCGCCCCCCCCTCCGGTGTCGGTACCGCTTCCGCCGGGGGGG
CTCGGCAGCGGTCCGGGTTCGAATCGGCCAGGCATGCCTCCGCCACCGCC
ACCACCAATGGGAAGGGGAGGAAGCGGCGGCGGTAATATGGGGACGGCAA
ATCGAGAACGGGGCCCCGGGGGAGGTATGCTGCCGCCTCCCCCTCCGCCG
CATCAGCAGCAGCAGGGTATGGGAGGACCGCCACTATTCCAACAACAGCA
GCAAGAGAGAGCTATGGGACGCGGCCCGCCGCCGATGCTGATGCCGCTGC
CACCCGGACGGGGCAATGGTCCCGATAACGCGCAGCAG
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Coding sequence (CDS) from alignment at H-elongata_contig12789:77..8414-

>mRNA_H-elongata_contig12789.2056.1 ID=mRNA_H-elongata_contig12789.2056.1|Name=mRNA_H-elongata_contig12789.2056.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2766bp|location=Sequence derived from alignment at H-elongata_contig12789:77..8414- (Himanthalia elongata Himel1 dioecious)
CAGGCGAACGACGTCGGCGCGAACCTTTTCGTCGGCCAGCTGGATCCAGA
TGTGGACGAGAAGATGCTATACGACACCTTCTCCGGGTTCGGGTTCATCA
CACAGACGCCCAAGGTCATGCGCGACCCGGACACGGGCATCTCCAAGGGC
TACGGCTTCGTTAGCTATGACGGCAGGCGAACGACGTCGGCGCGAACCTT
TTCGTCGGCCAGCTGGATCCAGATGTGGACGAGAAGATGCTATACGACAC
CTTCTCCGGGTTCGGGTTCATCACACAGACGCCCAAGGTCATGCGCGACC
CGGACACGGGCATCTCCAAGGGCTACGGCTTCGTTAGCTATGACGGGTTC
GAGGCCAGCGACATGGCGATCGAGTGCATGCACAATCAGTACCTGTGCAA
CCGTCAGATCTCGGTGCAGTACGCCTACAAGAAGGAATCTCGGGGAGAAC
GGCACGGAGGACAGGTTCGAGGCCAGCGACATGGCGATCGAGTGCATGCA
CAATCAGTACCTGTGCAACCGTCAGATCTCGGTGCAGTACGCCTACAAGA
AGGAATCTCGGGGAGAACGGCACGGAGGACAGGCGGAGCGACTCCTAGCC
GCGAATAACCCCAGCAAGTTCAAGGTCCACACCCTATTTGCCGCGGCTCC
CGGAAAAGTAGAGGCCTCGGCCGGAGGAGGGGCCGGCTTGGCGCCGGCAG
CGCCTTCCAGCCCCCCCCCCCCCTCCCGCCCCCCCGCGGAGCGACTCCTA
GCCGCGAATAACCCCAGCAAGTTCAAGGTCCACACCCTATTTGCCGCGGC
TCCCGGAAAAGTAGAGGCCTCGGCCGGAGGAGGGGCCGGCTTGGCGCCGG
CAGCGCCTTCCAGCCCCCCCCCCCCCTCCCGCCCCCCCGGTTCGGTGCCG
CCACTCCCTCCGGGGATGCCCCCGCCTCCGCCACCGCCGCCGACCCCGGG
GATGCCGCCGCTACCCCCCTCATCGACGCAGCCCAACACGCCCAGGCAGT
GGTCGTCCGGAGGGGGGCCGCCTCCACCACCGCAGGGAGGCATGATGCCC
CAGGGGATGCGTCCGCCGCCGCCCCCTGGGTACGGTGGCGGTGGTGGAGG
ATTCTCGCCGCACATGCTGCCGCCGCATCAGCATCAGCATCAGCACATGA
TGCACGGGTTCGGTGCCGCCACTCCCTCCGGGGATGCCCCCGCCTCCGCC
ACCGCCGCCGACCCCGGGGATGCCGCCGCTACCCCCCTCATCGACGCAGC
CCAACACGCCCAGGCAGTGGTCGTCCGGAGGGGGGCCGCCTCCACCACCG
CAGGGAGGCATGATGCCCCAGGGGATGCGTCCGCCGCCGCCCCCTGGGTA
CGGTGGCGGTGGTGGAGGATTCTCGCCGCACATGCTGCCGCCGCATCAGC
ATCAGCATCAGCACATGATGCACGGTGGTGGCTTCAGACACGGAATGAAC
ACGCGAAATGGAGGAGGAGGAGGAGGAAGACGACCCCAGATGATGGGGGG
CATGCCTCCGCCGCCGCCGCCGCCTAGCATGAACAACATGGGTCGCCCGC
CACCGCTGCCGCCCGCCGGGCGGAACCCTCAGCAGTCCATGCCCCCTCCC
CCTCCCCCCCCTCCGCCGCTGCCGCTTTCGGCGTCACCCTCGGCGAACGG
CGGCCCGGCAGGACAACATCGTGGTGGCTTCAGACACGGAATGAACACGC
GAAATGGAGGAGGAGGAGGAGGAAGACGACCCCAGATGATGGGGGGCATG
CCTCCGCCGCCGCCGCCGCCTAGCATGAACAACATGGGTCGCCCGCCACC
GCTGCCGCCCGCCGGGCGGAACCCTCAGCAGTCCATGCCCCCTCCCCCTC
CCCCCCCTCCGCCGCTGCCGCTTTCGGCGTCACCCTCGGCGAACGGCGGC
CCGGCAGGACAACATCGGCAAGGGGCAAATCATCCGCCGCCGCCTCCGCC
CCCTACAGTGGCAAGGGGCAAATCATCCGCCGCCGCCTCCGCCCCCTACA
GTCGGCCAAAATGACTTGGTGGGTGGAGGTGGAAATATTAGTACCATGCC
GCTGCCGCCCCCCCCTCCGGTGTCGGTACCGCTTCCGCCGGGGGGGCTCG
GCAGCGGTCCGGGTTCGAATCGGCCAGGCATGCCTCCGCCACCGCCACCA
CCAATGGGAAGGGGAGGAAGCGGCGGCGGTAATATGGGGACGGCAAATCG
AGAACGGGGCCCCGGGGGAGGTATGCTGCCGCCTCCCCCTCCGCCGCATC
AGCAGCAGCAGGGTATGGGAGGACCGCCACTATTCCAACAACAGCAGCAA
GAGAGAGCTATGGGACGCGGCCCGCCGCCGATGCTGATGCCGCTGCCACC
CGGACGGGGCAATGGTCCCGATAACGCGCAGCAGCGGCCAAAATGACTTG
GTGGGTGGAGGTGGAAATATTAGTACCATGCCGCTGCCGCCCCCCCCTCC
GGTGTCGGTACCGCTTCCGCCGGGGGGGCTCGGCAGCGGTCCGGGTTCGA
ATCGGCCAGGCATGCCTCCGCCACCGCCACCACCAATGGGAAGGGGAGGA
AGCGGCGGCGGTAATATGGGGACGGCAAATCGAGAACGGGGCCCCGGGGG
AGGTATGCTGCCGCCTCCCCCTCCGCCGCATCAGCAGCAGCAGGGTATGG
GAGGACCGCCACTATTCCAACAACAGCAGCAAGAGAGAGCTATGGGACGC
GGCCCGCCGCCGATGCTGATGCCGCTGCCACCCGGACGGGGCAATGGTCC
CGATAACGCGCAGCAG
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