mRNA_H-elongata_contig12788.2054.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: D8LB52_ECTSI (Urease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB52_ECTSI) HSP 1 Score: 243 bits (621), Expect = 2.900e-73 Identity = 121/146 (82.88%), Postives = 128/146 (87.67%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+ GKLADLVLWKPSLFGAKPEM+LK GQ AW+QMGDPNASIPTPEPVEMR MFAGKEGT AAA CSVAFVS SL G V GYGL+KR E GCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTC+PA +LPL+QKYFLF
Sbjct: 703 ETGKLADLVLWKPSLFGAKPEMILKGGQVAWSQMGDPNASIPTPEPVEMRVMFAGKEGTGAAAGCSVAFVSGPSLAEGGPVAGYGLKKRVEAVKGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCKPADTLPLAQKYFLF 848
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A7W1FJ15_9BACT (Urease subunit alpha n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1FJ15_9BACT) HSP 1 Score: 197 bits (502), Expect = 8.050e-58 Identity = 105/148 (70.95%), Postives = 117/148 (79.05%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFA--GKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLWKP+LFGAKPE+V+K G AWAQMGDPNASIPTP+PV MRPMFA GK A CS+AFVS ASL A+GA YGL KR E CRG+GKKDMKLND PK+TVDPETY+V ADGE LTC PA LPL+Q+YFLF
Sbjct: 429 EVGKLADLVLWKPALFGAKPELVVKGGVIAWAQMGDPNASIPTPQPVIMRPMFASFGK----ATGPCSIAFVSQASL-ANGAAASYGLGKRLEAVKRCRGIGKKDMKLNDATPKITVDPETYKVTADGEHLTCAPATKLPLAQRYFLF 571
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A017SUY6_9DELT (Urease n=1 Tax=Chondromyces apiculatus DSM 436 TaxID=1192034 RepID=A0A017SUY6_9DELT) HSP 1 Score: 185 bits (469), Expect = 1.430e-57 Identity = 98/146 (67.12%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLWKP+ FG KPE+VLK G AWAQMGDPNASIPTP+PV MRPMFA A S AFVS ASL +GAV YGL K EP GCR +GKKDM+LND LP ++VDPE+Y VRADGE LTC PA L L+Q+YFLF
Sbjct: 9 EVGKLADLVLWKPAFFGVKPELVLKGGVIAWAQMGDPNASIPTPQPVRMRPMFAAHG--RAPGRASFAFVSRASLD-TGAVASYGLTKLLEPVRGCRSLGKKDMRLNDALPAISVDPESYVVRADGEHLTCPPAARLALAQRYFLF 151
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: UPI0005C5696C (amidohydrolase family protein n=1 Tax=Chondromyces apiculatus TaxID=51 RepID=UPI0005C5696C) HSP 1 Score: 185 bits (469), Expect = 5.260e-57 Identity = 98/146 (67.12%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLWKP+ FG KPE+VLK G AWAQMGDPNASIPTP+PV MRPMFA A S AFVS ASL +GAV YGL K EP GCR +GKKDM+LND LP ++VDPE+Y VRADGE LTC PA L L+Q+YFLF
Sbjct: 50 EVGKLADLVLWKPAFFGVKPELVLKGGVIAWAQMGDPNASIPTPQPVRMRPMFAAHG--RAPGRASFAFVSRASLD-TGAVASYGLTKLLEPVRGCRSLGKKDMRLNDALPAISVDPESYVVRADGEHLTCPPAARLALAQRYFLF 192
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A4P5Y1G7_9BACT (Urease subunit alpha n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A4P5Y1G7_9BACT) HSP 1 Score: 193 bits (490), Expect = 4.310e-56 Identity = 102/146 (69.86%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLWKP+LFGAKPE+V+K G AWAQMGDPNASIPTP+PV MRP F G G A A+ S+AFVSAAS+ A+G V GYGL KR EP CRG+GK+DMK ND LP +TVDPETY V ADG LTC PA LPL+Q+YFLF
Sbjct: 425 EVGKLADLVLWKPALFGAKPELVVKGGFIAWAQMGDPNASIPTPQPVRMRPQF-GAFGRAAGAT-SIAFVSAASV-AAGTVAGYGLNKRIEPVRRCRGIGKRDMKNNDALPVITVDPETYRVTADGVHLTCAPASKLPLTQRYFLF 567
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: URE1_ANADF (Urease subunit alpha n=6 Tax=Anaeromyxobacter TaxID=161492 RepID=URE1_ANADF) HSP 1 Score: 190 bits (483), Expect = 4.900e-55 Identity = 103/144 (71.53%), Postives = 113/144 (78.47%), Query Frame = 1
Query: 7 GKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
GKLADLVLW+P+LFGAKPE+VLK G AWAQMGD NASIPTP+PV RPMF G G A+ SVAFVS ASL GAV GYGL KR GCRG+GKKDM+LND LP+M VDPETYEVRADG LL CEPA LPL+Q+YFLF
Sbjct: 431 GKLADLVLWRPALFGAKPELVLKGGLIAWAQMGDANASIPTPQPVVARPMF-GALGRAVGAT-SVAFVSRASL-EGGAVQGYGLAKRLVAVHGCRGLGKKDMRLNDALPRMEVDPETYEVRADGVLLRCEPAARLPLAQRYFLF 571
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A3B8Q6T6_9BACT (Urease subunit alpha n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q6T6_9BACT) HSP 1 Score: 189 bits (480), Expect = 1.350e-54 Identity = 103/146 (70.55%), Postives = 112/146 (76.71%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLWKP+ FGAKPEMV+K G AWAQMGDPNASIPTP+PV MRPMF G G A S SVAFVS SL A G V YGL KR E GCR V KKD++ ND P + VDPETYEVRADGELL CEPA SLPL+Q+YFLF
Sbjct: 429 EVGKLADLVLWKPAFFGAKPEMVIKGGLIAWAQMGDPNASIPTPQPVLMRPMF-GSYGR-ATGSSSVAFVSRLSLEA-GVVQKYGLNKRLEAVRGCRSVSKKDLRWNDATPVIKVDPETYEVRADGELLRCEPASSLPLAQRYFLF 571
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: URE1_ANASK (Urease subunit alpha n=2 Tax=unclassified Anaeromyxobacter TaxID=2620896 RepID=URE1_ANASK) HSP 1 Score: 189 bits (479), Expect = 1.880e-54 Identity = 100/144 (69.44%), Postives = 113/144 (78.47%), Query Frame = 1
Query: 7 GKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
GKLADLVLW+P+ FGAKPE+VLK G AWAQMGD NASIPTP+PV RPMF G G A+C VAFV+ A+L GAV GYGL KR GCRG+GK+DM+LND LP+M VDPETYEVRADGELL CEPA LPL+Q+YFLF
Sbjct: 431 GKLADLVLWRPAFFGAKPELVLKGGLIAWAQMGDANASIPTPQPVLARPMF-GALGRALGATC-VAFVAGAAL-EDGAVQGYGLSKRLVAVRGCRGLGKRDMRLNDALPRMEVDPETYEVRADGELLRCEPAARLPLAQRYFLF 571
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A4U1JCN5_9DELT (Urease subunit alpha n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JCN5_9DELT) HSP 1 Score: 189 bits (479), Expect = 1.880e-54 Identity = 98/146 (67.12%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+VGKLADLVLW+P+ FGAKPE+V+K G AWAQMGDPNASIPTP+PV MRPMFA A S+AFVS AS+ ASG YGL KR E GCR +GKKDM+LND LP++TVDPETY V ADG LTCEPAK LPL+Q++FLF
Sbjct: 429 EVGKLADLVLWRPAFFGAKPEIVIKGGVIAWAQMGDPNASIPTPQPVRMRPMFASFG--RAPGRASIAFVSGASI-ASGVAASYGLGKRIEAARGCRALGKKDMRLNDTLPRITVDPETYAVTADGVRLTCEPAKVLPLAQRFFLF 571
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Match: A0A357LVJ5_9GAMM (Urease subunit alpha n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A357LVJ5_9GAMM) HSP 1 Score: 186 bits (471), Expect = 2.600e-53 Identity = 97/146 (66.44%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 1 QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRPMFAGKEGTMAAASCSVAFVSAASLGASGAVGGYGLRKRQEPYFGCRGVGKKDMKLNDKLPKMTVDPETYEVRADGELLTCEPAKSLPLSQKYFLF 438
+ GKLADLVLWKP++FGAKPEMV+K G AW+QMGDPNASIPTP+PV MRPMF G G A S+A+VS + + SGA GYGL KR E CRG+GKKDM LND LP +TVDPETYEV ADG+ LTCEPA LPL+Q+YF+F
Sbjct: 425 ETGKLADLVLWKPAMFGAKPEMVIKGGVIAWSQMGDPNASIPTPQPVFMRPMF-GSFG-QATGPTSIAYVSQSCV-ESGAAEGYGLSKRIEGVRNCRGLGKKDMVLNDALPAITVDPETYEVTADGDKLTCEPATELPLAQRYFMF 567 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12788.2054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12788.2054.1 >prot_H-elongata_contig12788.2054.1 ID=prot_H-elongata_contig12788.2054.1|Name=mRNA_H-elongata_contig12788.2054.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp QVGKLADLVLWKPSLFGAKPEMVLKSGQPAWAQMGDPNASIPTPEPVEMRback to top mRNA from alignment at H-elongata_contig12788:7123..8349- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12788.2054.1 ID=mRNA_H-elongata_contig12788.2054.1|Name=mRNA_H-elongata_contig12788.2054.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1227bp|location=Sequence derived from alignment at H-elongata_contig12788:7123..8349- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12788:7123..8349- >mRNA_H-elongata_contig12788.2054.1 ID=mRNA_H-elongata_contig12788.2054.1|Name=mRNA_H-elongata_contig12788.2054.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig12788:7123..8349- (Himanthalia elongata Himel1 dioecious)back to top |