mRNA_H-elongata_contig12767.2041.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI) HSP 1 Score: 1172 bits (3031), Expect = 0.000e+0 Identity = 583/659 (88.47%), Postives = 611/659 (92.72%), Query Frame = 1
Query: 1 IPLANL-QVPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTTVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1974
+ ++NL QV K+EKLG VV+KVFS+MG IA+DGL HPFD+TT LTKGFAF+NF+NPQDAKQA ++LNGWQLDKSH IKV PFEQLARLRSLPE YE PE K FKPRVDPSSWLAD QHRDQFVLRYSEPHPSGK VHEAEVMW EK Q P LCYGGEREKEAGKAW CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETY+MTCNFE GDKAIIVWEVLTGQMLRAFPM TTT ADGAASLFRWS DGK+LARKGKDLISIYELPS+RLLDKKSLKAEGVS FEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ+EGDYLCVKVLRHSKSKKTMYNNFEIFR+RE LVPVETMEKKQ VAAFAWEPAGDRFA+VLGDVP+LEV FYTMKGGAGKNELQE ETL++RPFNHIYWSPMGNICLLAAMG+DVGPHNGRLE YDVENQ+TLKQTEHFRCNYIEWDPSGRY CTAVSQPVTGSHWKAQMDNGYQL+SFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKK+VKNLRKYEK XXXXXXXXXXXX KI+MK++FRQQVAEM LRL GRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 48 VVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAW-----CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQVAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA) HSP 1 Score: 808 bits (2087), Expect = 4.970e-279 Identity = 386/651 (59.29%), Postives = 483/651 (74.19%), Query Frame = 1
Query: 19 QVPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTTVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLG-DVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 1962
+VP EK KL VV K+F++ G I E+G+ P D + + GF FINF ++A+ AV+ +N +QLDK H V P+E+L +L S+P+ Y PP ++PR D SWLAD HRDQFV+RYS P G P HE V WCE+ P CYGGEREK GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+EFSPCE Y++TCNF+T ++A+IVWEV +G +LR FP G SLF+WS DG+F+ARKG+D +SIY LPS+ LLDKKSLKA G++ FEWSP + LAYWAPEQ N PARVSVVEIPSRK+LRQKNL VSECRLHWQNEG YLCVKVLRHSK+KKTMYNNFE+FR+ + VPVE +E + +V AFAWEP GDRFA+V G ++PR+ + FYTMKGGA NEL E TL ++P NH+YWSP G ++AAMGE+ G NG L YDVE++ L+++EHFR +Y+EWDPSGRY+CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E KDNFYQ+ WRPRP SLL+S EKKK+V+NL+KYE+R AR AM+ K+R K FR VA RL R ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct: 68 RVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTDAAGE-SLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAW-----VELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP--ARAFEGGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFRAHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE) HSP 1 Score: 619 bits (1596), Expect = 1.690e-210 Identity = 320/408 (78.43%), Postives = 341/408 (83.58%), Query Frame = 1
Query: 769 TVADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQ------VAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1974
+V DGAASLFRWS DGK+LARKGKDLISIYELPS+RLLDKKSLKAEGVS FEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ VAAFAWEPAGDRFA+VLGDVP+LEV FYTMKGGAGKNELQ ETL++RPFNHIYWSP+GNIC+LAAMG+DVGPHNGRLE YDVENQ+TLKQTEHFRCNYIEWDPSGRY CTAVSQPVTG HWKAQMDNGYQL+SFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKK+VKNLRKY+KR XXXXXXAREAM+DKI+MK++FRQQ VA+M+LRL RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 11 SVEDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ--------------------------------------------VAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL) HSP 1 Score: 602 bits (1553), Expect = 3.720e-199 Identity = 314/657 (47.79%), Postives = 420/657 (63.93%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDV-PRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1974
V K+ KL +VVKK+FS++G + + + PF T GFAF+ F A AV ++N + LDK H + V + L + + PE + P+ + F + +WL D RD FVLR+S E E+ W +K + L Y G REK GK W C +++WSPQGTYL TFH GIALWGG+ +EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP T V G + F+WS D +F+AR+GKD+IS+YELPS++LLDKKSLKA+GV F WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+L W G +L VKV RHSKSKKT++ NFEIFR+ ESLVPVE+ E K + AF++EP G RFA+V G+ RL V+FY M GGA KNEL TL ++P +H+YWSP GN +LA +GE NG LE +D + + ++ EHF+C ++EWDPSGR V +AV QP+ S++K QMDNG+ L++FQG++ E KKD FYQ WRPRP +LL+ E K +VKNL+KYEKR ++K R +F VA RRQE + L NGYDS+D+ Y+V++R+ + VLS KE +Q
Sbjct: 59 VDNAKHGKLLNVVKKIFSQVGTVVD--IDMPFAANGN-TNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEVT-LDYDGAREKTNGKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL) HSP 1 Score: 600 bits (1546), Expect = 4.260e-198 Identity = 311/657 (47.34%), Postives = 422/657 (64.23%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKGGA-GKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
V K+ KL +VVKK+F ++G + + + PFD + + T GFAFI + A AV ++N + LDK H + V +E + R PE + PP SF + +WL D RD FVLR+ E E+ W +K + L Y G+REK+ GK W C +++WSPQG+YL TFH GIALWGGE++EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP +T V G + F+WS D KF+AR+GKD+IS+YELPS++LLDKKSL+AEGV F WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR+ E LVPVE +E K ++ AFAWEP G RFA V G+ RL V+FY M GG+ E+ TL ++ +H+YWSP+GN +LA +GE NG+LE +DV Q ++ EHF+C ++EWDPSGR V TAV QP+ S++K MDNGY L++FQG++ E KK+ FYQ WRPRP +LL+ +E +VKNL+ +EKR +++ R + +F++ + A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct: 59 VDESKHGKLLNVVKKIFGQVGNVVD--IQVPFDSSGKTT-GFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQW-----CSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN) HSP 1 Score: 595 bits (1534), Expect = 2.540e-196 Identity = 307/656 (46.80%), Postives = 416/656 (63.41%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDV-PRLEVAFYTMKGGAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
+ K+ KL +VVKK+FS++G + + + PF +T GFAF+ F A AV ++N + LDK H + V +E L + + P + P+ F + +WL D RD F LR+ E E+ W +K + L Y G+REK+ GK W C +++WSP GTYLTTFH G+ALW GE +EK GRF H++VK+ FSP E Y++T + D AI+VWEV TG++LR+FP+ T V G + F+WS D +F+AR+GKD+IS+YELPS++LLDKKSLKA+G+ F WSP D VLAYWAPE N PARVS+VE+PSR+ELRQKNL VS+C+L W G +L VKV RHSKSKKT++ NFE+FR+RESLVPVE +E K+ + AF++EP G RFAVV G+ RL V+FY M GG KNEL TL ++P +H+YWSP GN +LA MGE NG LE +D + + ++ EHF+C ++EWDPSGR V +AV QP+ S++K QMDNG+ L+SFQG++ E KKD FYQ WRPRP +LL+ E +VKNL+KYE+R ++K R +F + V + R E + L GYDS+DE Y+V SRT + V+S E +
Sbjct: 59 IDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEIS-LDYAGDREKQNGKQW-----CSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTELVQARKSAARALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE) HSP 1 Score: 595 bits (1535), Expect = 4.670e-196 Identity = 304/657 (46.27%), Postives = 421/657 (64.08%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVPR-LEVAFYTMKGGAG-KNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
V K+ KL +VVKK+F ++G + + + PF + T GFAF+ + A AV ++N + LDK H + V +E + R P+ + P+ F + SWL D RD FVLR+ E E+ W +K + L Y G+REK GK W C +++WSPQGTYL TFH GIALWGG+++EK GRF HK VK+ FSP E Y++T + + AII+W+V T ++LRAFP T V G + F+WS D K++AR+G D+IS+YELPS++LL+KKSL+AEGV F WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+LHW +G +LCVKV RHSKSKKTMY NFE+FR++E LVPVE +E K ++ AFAWEP G RFA V G+ + L V+FY M GG+ E+ TL+++ +H+YWSP+GN +LA +GE NG+LE +D Q ++ EHF+C+++EWDPSGR V TAV QP+ S++K MDNGY L++FQG++ E KKD F+Q WRPRP +LL+ A+ K +VKNL+K+EKR +++ + + +F++ + + + AGRR E + L GYDSDDE+ Y+V T + VL VKE +
Sbjct: 59 VDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDDGNTT-GFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQW-----CMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP) HSP 1 Score: 593 bits (1529), Expect = 1.460e-195 Identity = 309/657 (47.03%), Postives = 417/657 (63.47%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKGGAGK-NELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
V K+ KL +VVKK+F ++G + + + PF + T GFAF+ + A AV ++N + LDK H + V +E + R + P + P+ F + +WLAD RD FVLR+ E E+ W +K + L Y G+REK K W C +++WSPQGTYL TFH GIALWGG+++EK GRF HK+VK+ FSP E YI+T + D AII+W+V T +MLRAFP T V G + F+WS D K++AR+GKD+ISIYELPS++LL+KKSL+AEGV F WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FR+ E LVPVE +E K+ + AFAWEP G RFA G+ RL V+FY M GG+ E+ TL+++ +H+YWSP+GN +LA +GE NG+LE +D Q ++ EHF+C ++EWDPSGR V TAV QP+ S++K MDNGY L++FQG++ E KKD FYQ WRPRP +LL+ E +VKNL+K+EKR +++ R + +F++ + + A RR E V L +GYDS+DES Y+V S T + VL KE +
Sbjct: 59 VDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGGGKTT-GFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA) HSP 1 Score: 589 bits (1519), Expect = 5.330e-194 Identity = 304/661 (45.99%), Postives = 416/661 (62.93%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGDVP-RLEVAFYTMKGGAGKNELQEQE-----TLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
V K+ KL +V+ K+FS++G + + L PF ++ T GFA + + A +AV ++NG+ LDK H + V + + + +S PE + P+ + F + +WL D RD FVLR+ E E+ W +K + L Y G REK GK W C +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+ FSP ETY++T + + AIIVW+V +G++LR FP T V G + F+WS D +F+AR+GKD++S+YELPS++LL+KKSLKA+GV F WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+L+W G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K + AFAWEP G RFA V G+ RL V+FY M GGA ++ E TL E+P +H+YWSP+GN +LA +GE NG LE +D + + ++ EHF+C ++EWDPSGR V T+V QP+ S++K QMDNGY L+SFQG+ E KKD FYQ WRPRP SLL+ E +VKNL+KYEKR ++K R++ +F+ V + R V L GYDS+DE Y+V++ +VVLS E +
Sbjct: 60 VDSAKHAKLLAVLTKIFSQVGAVVD--LSMPFGKSGSTT-GFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEIS-LEYDGAREKVNGKQW-----CSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRAVQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA) HSP 1 Score: 588 bits (1515), Expect = 1.780e-193 Identity = 306/657 (46.58%), Postives = 417/657 (63.47%), Query Frame = 1
Query: 22 VPREKYEKLGSVVKKVFSRMGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHNIKVIPFEQLARLRSLPENYEPPEAKSFKPRVDPSSWLADGQHRDQFVLRYSEPHPSGKPVHEAEVMWCEKNQAPRLCYGGEREKEAGKAWRVGKLCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYIMTCNFETGDKAIIVWEVLTGQMLRAFPMTTTT-----VADGAASLFRWSGDGKFLARKGKDLISIYELPSIRLLDKKSLKAEGVSAFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQNEGDYLCVKVLRHSKSKKTMYNNFEIFRMRESLVPVETMEKKQHVAAFAWEPAGDRFAVVLGD-VPRLEVAFYTMKG-GAGKNELQEQETLRERPFNHIYWSPMGNICLLAAMGEDVGPHNGRLELYDVENQATLKQTEHFRCNYIEWDPSGRYVCTAVSQPVTGSHWKAQMDNGYQLYSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRXXXXXXXXXXXXAREAMSDKIRMKMDFRQQVAEMELRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1971
V K+ KL +VVKK+F ++G + + + PFD + + T GFAF+ + AK AV ++N + LDK H + V +E + R + P+ + F + +WL D RD FVLR+ E E+ W +K + Y G+REK GK W C +++WSPQGTYL TFH GIALWGG+++EK GRF HK+V FSP E Y++T + D AII+W+V T +MLRAFP T V G + F+WS K++AR+G D+ISIYELPS++LL+KKSL+AEGV F WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K ++ AFAWEP G RFA V G+ RL V+FY M G E+ TL+++ +H+YWSP+GN +LA +GE NG+LE +D Q ++ EHF+C ++EWDPSGR V TAV QP+ S++K MDNGY L++FQG++ E KK++FYQ WRPRP +LL+ AE KK+VKNL+KYEKR +++ R +F++ + + A RR E + L +GYDS+DE+ Y+V S T + VL KE I
Sbjct: 59 VDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGSGKTT-GFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQW-----CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAVRRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12767.2041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12767.2041.1 >prot_H-elongata_contig12767.2041.1 ID=prot_H-elongata_contig12767.2041.1|Name=mRNA_H-elongata_contig12767.2041.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=633bp MGIIAEDGLGHPFDETTQLTKGFAFINFVNPQDAKQAVSSLNGWQLDKSHback to top mRNA from alignment at H-elongata_contig12767:626..7331- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12767.2041.1 ID=mRNA_H-elongata_contig12767.2041.1|Name=mRNA_H-elongata_contig12767.2041.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6706bp|location=Sequence derived from alignment at H-elongata_contig12767:626..7331- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12767:626..7331- >mRNA_H-elongata_contig12767.2041.1 ID=mRNA_H-elongata_contig12767.2041.1|Name=mRNA_H-elongata_contig12767.2041.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3798bp|location=Sequence derived from alignment at H-elongata_contig12767:626..7331- (Himanthalia elongata Himel1 dioecious)back to top |