mRNA_H-elongata_contig12721.2020.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12721.2020.1
Unique NamemRNA_H-elongata_contig12721.2020.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.130e-58
Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQGKGARRKSRGRRRMEILLRETTAVAPSLQPYVAGAGAVERGLYRFLSPITTQ 374
            NTGRWTYDEHRLFLRGLELHGKGWKKIASLI+TRTVVQIRTHAQKYFQK+AKAKQNG     +HG+ A+DS+G G+RRKSRGRRRME LLR +TAVAPSLQPYVAGAGAVE GLYRFLSPIT Q
Sbjct:    5 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG-----EHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPITIQ 123
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 2.520e-52
Identity = 104/136 (76.47%), Postives = 117/136 (86.03%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQGKGARRKSRGRRRMEILLRETTAVAPSLQPYVAGAGAVERGLYRFLSPITTQAR*EMSGRSPTS 410
            NTGRWTYDEHRLFLRGLELHGKGWKKIASLI+TRTVVQIRTHAQKYFQK+AKAKQNG     +HG+ A+DS+G G+RRKSRGRRRME LLR +TAVAPSLQPYVAGAGAVE GLYRFL+   + +    +G SPT+
Sbjct:  573 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNG-----EHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLAGHASSS----AGASPTT 699
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.500e-32
Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQGKGARRKSRGRRRMEILLRETTAVAPSLQPYVAGAG---AVERGLYRFLSP 362
            NTGRW+Y+EHRLFL+GLE+HGKGWKKIA LI+TRTVVQIRTHAQKYFQK+AKAKQ G     + G   +D   +G  RK+ G+R+   L  E TAVAPSLQPY+   G   +VE GLY+FLSP
Sbjct:   30 NTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGA----EPGAVLLD---RGLGRKN-GKRKSGSL--EGTAVAPSLQPYMTLPGVNGSVESGLYKFLSP 142
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.040e-26
Identity = 75/150 (50.00%), Postives = 95/150 (63.33%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGE--AAVDSQGKGARRKSRGRRR-----MEILLRETT--AVAPSLQPYVAGA----------------GAVERGLYRFLSPITTQA 377
            NTGRWT +EH LFL+GLE+HGKGWKKIA LI+TRTVVQIRTHAQKYFQK+AKAK+NG      HG+      ++  G R K  G+RR       ++  E T  A++P+LQ Y+ G+                 A+E+GLYRFLSP+   A
Sbjct:   99 NTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG-----HHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDA 243
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 108 bits (271), Expect = 2.710e-23
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQG 221
            NTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG     + G+ A++ +G
Sbjct:  116 NTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG-----EEGDVAMEGRG 183
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.200e-22
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQG 221
            NTGRWT DEHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG     + G+ ++D++G
Sbjct:  166 NTGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG-----EEGDVSMDARG 233
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A1E7FR15_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR15_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.730e-22
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 3 
Query:   12 RWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNG 173
            RWT +EH LFL+GLELHGKGWKKIA LI++RTVVQIRTHAQKYFQK+AKAKQNG
Sbjct:    1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
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BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 108 bits (271), Expect = 4.500e-22
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQG 221
            NTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG     + G+ A++ +G
Sbjct:  116 NTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG-----EEGDVAMEGRG 183
[Close]
BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A7S1ZJN8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZJN8_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.540e-22
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQG 221
            NTGRWT DEHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG     + G+ +++ +G
Sbjct:  181 NTGRWTADEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG-----EEGDVSMEGRG 248
[Close]
BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Match: A0A6S8TU06_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8TU06_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.020e-22
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:    3 NTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKVAKAKQNGGGVGGDHGEAAVDSQ 218
            NTGRWT DEHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG     + GE +++++
Sbjct:  134 NTGRWTADEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNG-----EEGEVSMENR 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12721.2020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G656_ECTSI1.130e-5884.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H1_9PHAE2.520e-5276.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4FI15_9STRA4.500e-3263.41Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TWM0_9STRA1.040e-2650.00SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A8J9S9N3_PHATR2.710e-2371.23Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S1V9A3_9STRA1.200e-2272.60Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7FR15_9STRA1.730e-2285.19Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
B7GAW9_PHATC4.500e-2271.23Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZJN8_9STRA5.540e-2271.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6S8TU06_9STRA6.020e-2272.22Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12721contigH-elongata_contig12721:1484..4946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue1.2e-22
Seed eggNOG ortholog2880.D7G656
KEGG koko:K03797,ko:K09391
EggNOG free text desc.ubiquitin modification-dependent histone binding
EggNOG OGsKOG0724@1,KOG0724@2759
EC3.4.21.102
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-11_005250.1
Exons8
Model size1300
Cds size921
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929754.8404305-CDS-H-elongata_contig12721:1483..15271622929754.8404305-CDS-H-elongata_contig12721:1483..1527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 1484..1527 -
1691679145.1486332-CDS-H-elongata_contig12721:1483..15271691679145.1486332-CDS-H-elongata_contig12721:1483..1527Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 1484..1527 -
1622929754.8552415-CDS-H-elongata_contig12721:1623..17141622929754.8552415-CDS-H-elongata_contig12721:1623..1714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 1624..1714 -
1691679145.15794-CDS-H-elongata_contig12721:1623..17141691679145.15794-CDS-H-elongata_contig12721:1623..1714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 1624..1714 -
1622929754.866595-CDS-H-elongata_contig12721:2058..21771622929754.866595-CDS-H-elongata_contig12721:2058..2177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 2059..2177 -
1691679145.1672041-CDS-H-elongata_contig12721:2058..21771691679145.1672041-CDS-H-elongata_contig12721:2058..2177Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 2059..2177 -
1622929754.8806984-CDS-H-elongata_contig12721:2627..28951622929754.8806984-CDS-H-elongata_contig12721:2627..2895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 2628..2895 -
1691679145.178464-CDS-H-elongata_contig12721:2627..28951691679145.178464-CDS-H-elongata_contig12721:2627..2895Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 2628..2895 -
1622929754.8953683-CDS-H-elongata_contig12721:3012..32601622929754.8953683-CDS-H-elongata_contig12721:3012..3260Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 3013..3260 -
1691679145.1885152-CDS-H-elongata_contig12721:3012..32601691679145.1885152-CDS-H-elongata_contig12721:3012..3260Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 3013..3260 -
1622929754.9116876-CDS-H-elongata_contig12721:3592..37191622929754.9116876-CDS-H-elongata_contig12721:3592..3719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 3593..3719 -
1691679145.1980488-CDS-H-elongata_contig12721:3592..37191691679145.1980488-CDS-H-elongata_contig12721:3592..3719Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 3593..3719 -
1622929754.9291246-CDS-H-elongata_contig12721:4050..40741622929754.9291246-CDS-H-elongata_contig12721:4050..4074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 4051..4074 -
1691679145.2065225-CDS-H-elongata_contig12721:4050..40741691679145.2065225-CDS-H-elongata_contig12721:4050..4074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12721 4051..4074 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929754.941504-UTR-H-elongata_contig12721:4074..42061622929754.941504-UTR-H-elongata_contig12721:4074..4206Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12721 4075..4206 -
1691679145.2162764-UTR-H-elongata_contig12721:4074..42061691679145.2162764-UTR-H-elongata_contig12721:4074..4206Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12721 4075..4206 -
1622929754.9537678-UTR-H-elongata_contig12721:4699..49461622929754.9537678-UTR-H-elongata_contig12721:4699..4946Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12721 4700..4946 -
1691679145.2239685-UTR-H-elongata_contig12721:4699..49461691679145.2239685-UTR-H-elongata_contig12721:4699..4946Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12721 4700..4946 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12721.2020.1prot_H-elongata_contig12721.2020.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12721 1484..4074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12721.2020.1

>prot_H-elongata_contig12721.2020.1 ID=prot_H-elongata_contig12721.2020.1|Name=mRNA_H-elongata_contig12721.2020.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=307bp
MRDERPLSDINGPPIAAAGQGAGPRGYVGAAGAGGNVASGSSRPLLSQSP
LACTGGSAVTAGVTAAEATEVVAVLPPKWYSAGRGVDDLLNQAERLDWIA
DSGGTEDPATAEPAAAASLGLKVGIPATIPMSAGRVPSDLHQPSLKRVRS
SGCAPSGLVNSSAAVASLENSAAPNPAATTTAFTTSMRACVVSVDGQPHQ
SASLPLVCPLASISVSGTNAPTFGVSCNGDGSGLSPSGLRGSDAEEERLS
GLSDFEGLIEDQDLTGTPPLGAVSDESCVAGASGIENNAAAGGMDEDAFV
AALLDG*
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mRNA from alignment at H-elongata_contig12721:1484..4946-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12721.2020.1 ID=mRNA_H-elongata_contig12721.2020.1|Name=mRNA_H-elongata_contig12721.2020.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3463bp|location=Sequence derived from alignment at H-elongata_contig12721:1484..4946- (Himanthalia elongata Himel1 dioecious)
AGAACACGGGGCGGTGGACGTACGACGAACATAGGCTGTTCCTGCGGGGG
CTGGAGCTGCACGGAAAGGGCTGGAAGAAGATCGCGTCGCTTATCAGGAC
GCGCACGGTCGTGCAGATCCGCACCCACGCGCAGAAGTACTTCCAGAAGG
TGGCGAAGGCGAAGCAGAACGGTGGAGGCGTCGGCGGTGACCACGGGGAG
GCGGCCGTCGACTCCCAGGGAAAGGGCGCGCGCAGGAAGAGCCGAGGGTG
CGGCCGGCGGAGATTTTTGTTGTTGAACTCTTTCAAGCTTCCTTGTTTTT
TTTCTTCTTCTGATTAGACTTTCATCGGAGAACGCGTCGTCAATGGTATG
ACAGATAGAGCACTCAAAAATTTAGTACACCTAATAGTGCTTATGCTGTA
TATATATATATATATGTTGCTGATCGATTGCCGGCAACGAAGGCAACATG
CACAGGATGTGCCTAATACTTACCAGGTGGAGGGTACATGATAACCTCCT
CCACTTCCTATCATGGCCATGATGCCCGGCTGTCACGCCATCTCGACCGA
ACGCCCTTTTTTCGCGCCTCTTTTAAAACAGTTTTCAGTTGGTGTGGTGT
GCTCACTGTCGCTTGGCTCTCTCTCTCTCTCTCTTACACACATGTCACCG
AAAAAAAAATGTTTGCGCCGCTCGGGACCCCCCCTCCCCACACACACCGC
GCGCCAAAACACTGCTCGTGTTTGCGGTCACGGCGGGCAGGCGAAGGCGC
ATGGAGATCCTTCTGAGGGAAACAACCGCGGTTGCGCCTTCGTTGCAGCC
CTACGTGGCCGGCGCTGGGGCGGTGGAAAGAGGCCTCTACCGCTTTCTTT
CTCCGATCACCACTCAGGCGAGATGAGAGATGAGCGGCCGCTCTCCGTTG
GCGCTCAGAGCTGGGGGCGCCGCGTCTGTGCTCTAGGCGTTTACATTTAT
GAAAGTGCGCTTGCGCGGCTTCTTTCCTCTATCCTCAAAAATATACGCGC
GATAAGGTCAGGGCGTAAACAAGACATACATAGAAGCAAAAATGTGAAAC
ATACATGGAGTAGTATAGTATAGTATAGTATAGTATAGTAGTATATAAAA
ACCGAAACAAGAAAGGACGGACCAACTAGGTACGGTGTGCGTACGGTAAT
GCTGAGCGTGAAGCAGGGTAGCAATTGTCCTCAATACTTCGATGGTTTTG
CGCGGCGTGGTGTTCTGAGGTGTGCAGGACATCAATGGGCCACCAATTGC
GGCGGCGGGTCAGGGGGCCGGCCCAAGAGGCTACGTGGGCGCGGCGGGAG
CTGGTGGGAACGTTGCTTCAGGGTCATCACGGCCACTGTTGAGTCAATCT
CCGCGTGTGTGTGCGCGCCGTGCGCATCTCTATTGTTTTGTTCGCTTTTA
TTTTGTCGTTCGGGAATAAGCTCCTAAACAATAAGAAAACCTAGTATCCT
CACGAAACACAGCGACAAACGCGTTCTTTCCAAGGAACACATAGTCAGTC
GAGAGAGTATTAGTCGCGAAGCCATGCTCCGCAGAAAGCAGACACTCGAG
CGGAATACGATAGCAGGATAAACGTTTTCCCCCTCCCTCCCTGTCGTCCG
TGTTGCCACTAGCCTTTAAACTCACGATAATTTTGTCACAATCACGACGA
ACCCTGAACAGTAATATATAAAATATAATAGTCTAGTTGCTTGCACGGGT
GGCAGCGCTGTGACGGCCGGGGTGACAGCGGCGGAAGCGACGGAGGTGGT
GGCGGTCCTTCCGCCGAAGTGGTACAGTGCGGGTCGCGGCGTTGACGACT
TGCTAAACCAAGCGGAGCGTCTCGATTGGATTGCAGACAGCGGGGGGACC
GAAGACCCGGCGACAGCAGAGCCAGCAGCGGCGGCCTCCTTGGGACTGAA
AGTGGGCATCCCGGCGACGATTCCGATGTCGGCGGTGGGGTGCGCAGCTG
CAGATTTGGCGAATTATTCAGCGGACGGTGGCGCCGCGCATCAGCCCGCC
GTTGCTCCTCGAATCTGGGTTTCGGGAAATAATCTCGACGCCCAGCAGCA
GGGACGTGTACCGTCCGATCTGCATCAGCCATCTCTCAAGAGGGTGCGCT
CTAGCGGCTGCGCTCCATCCGGTTTGGTGAATTCCTCGGCTGCCGTAGCT
TCTCTGGAAAATTCCGCCGCCCCAAACCCAGCAGCGACCACTACGGCTTT
CACTACTTCCATGCGCGCATGCGTTGTGAGCGTGGATGGACAACCTCATC
AATCGGCATCGCTGCCACTGGTATGTCCGTTGGCATCTATCTCGGTCTCC
GGGACCAACGCTCCCACATGTATTGTTATTGACGCCGCTACCTCATCTCT
ATCTCCATCTCTATCTGCTTCTGCACCGTCAGAAACGACATCCGGGTCAA
CCCAATCTACTGCATTACCTTCTATCCCGTCACCCGCTTGGAGGCATGGC
AGCGCCGCATCGAGCACGGTGACGGCTTCTGTCGCGCGGAAAAATGACAC
GTGCCCGACCGAAGTCGGTAACAGCGGCGCAGCCGTAGCCACTGTCAAGG
AGACCCGCGTCGCCACGGAGGAGGCGAACCATCGAGAGCACGATATCGCG
CCATCTTGTGGCGATCGTCCTGGATTAACCGAGGAAAACGTCGATATGAC
TGATTGGATCGGCTTGCCCCCAACAGTGGCAGCGGTGGCGTCAGCGAGGG
GAGACTCCGCCGTTGCCCTGACAGCAGACTTCGGCACCGGAGGTCGGGTT
GCCACAGAAGCGGTGAAAGTTGGAGTCAGTTGCAACGGAGACGGGTCGGG
GTTGAGCCCGTCCGGCTTGCGGGGTTCGGACGCAGAAGAGGAGCGTCTGT
CGGGGTTGTCCGACTTCGAAGGCCTCATTGAGGACCAGGTGGGCGTGAGC
AACAGCGGTTGGTTGGTACCTTTTTGTCCAATGTTTTTTCTCTGTCTAAA
GTCCTTTTGCTTTGGTGCCTGCTGTAAAAATATATATTGTGTGCGACCCA
AGGAATACACAATCGCCCAGAGGGTTGATTTTTTTTCGGTCCAACACATG
GTGGATGCGGTTCTGGAGTCAAAAGACCCGCTACAACGACTATGACTGCT
TCTTGCGACTACTAATGGCGTCACTGCCGCGTTCGCCATCCGCGCGCAGC
TTCTGGCCGTCTCGCCGACGTCTCTCTTACCCCTTTCCCACCACCCTCCT
CATATCGCGCGTAACCATATGCTCGTGTACAGGATCTCACCGGCACCCCT
CCGTTGGGGGCCGTCTCCGACGAGAGCTGCGTGGCTGGAGCCAGCGGCAT
CGAAAACAACGCAGCAGCGGGTGGTAATACATTAATCGATGGTGGAAACG
ATGCCGATAACGGCGCCGCCACCACCATGGGTGTGAGCAGCGGAGATGGC
GGTGGTGTGCTCGACGAAGGGATGGACGAAGACGCCTTCGTCGCGGCGCT
CCTCGACGGTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig12721:1484..4946-

>mRNA_H-elongata_contig12721.2020.1 ID=mRNA_H-elongata_contig12721.2020.1|Name=mRNA_H-elongata_contig12721.2020.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1842bp|location=Sequence derived from alignment at H-elongata_contig12721:1484..4946- (Himanthalia elongata Himel1 dioecious)
ATGAGAGATGAGCGGCCGCTCTCCATGAGAGATGAGCGGCCGCTCTCCGA
CATCAATGGGCCACCAATTGCGGCGGCGGGTCAGGGGGCCGGCCCAAGAG
GCTACGTGGGCGCGGCGGGAGCTGGTGGGAACGTTGCTTCAGGGTCATCA
CGGCCACTGTTGAGTCAATCTCCGCGACATCAATGGGCCACCAATTGCGG
CGGCGGGTCAGGGGGCCGGCCCAAGAGGCTACGTGGGCGCGGCGGGAGCT
GGTGGGAACGTTGCTTCAGGGTCATCACGGCCACTGTTGAGTCAATCTCC
GCTTGCTTGCACGGGTGGCAGCGCTGTGACGGCCGGGGTGACAGCGGCGG
AAGCGACGGAGGTGGTGGCGGTCCTTCCGCCGAAGTGGTACAGTGCGGGT
CGCGGCGTTGACGACTTGCTAAACCAAGCGGAGCGTCTCGATTGGATTGC
AGACAGCGGGGGGACCGAAGACCCGGCGACAGCAGAGCCAGCAGCGGCGG
CCTCCTTGGGACTGAAAGTGGGCATCCCGGCGACGATTCCGATGTCGGCG
TTGCTTGCACGGGTGGCAGCGCTGTGACGGCCGGGGTGACAGCGGCGGAA
GCGACGGAGGTGGTGGCGGTCCTTCCGCCGAAGTGGTACAGTGCGGGTCG
CGGCGTTGACGACTTGCTAAACCAAGCGGAGCGTCTCGATTGGATTGCAG
ACAGCGGGGGGACCGAAGACCCGGCGACAGCAGAGCCAGCAGCGGCGGCC
TCCTTGGGACTGAAAGTGGGCATCCCGGCGACGATTCCGATGTCGGCGGG
ACGTGTACCGTCCGATCTGCATCAGCCATCTCTCAAGAGGGTGCGCTCTA
GCGGCTGCGCTCCATCCGGTTTGGTGAATTCCTCGGCTGCCGTAGCTTCT
CTGGAAAATTCCGCCGCCCCAAACCCAGCAGCGACCACTACGGCTTTCAC
TACTTCCATGCGCGCATGCGTTGTGAGCGTGGATGGACAACCTCATCAAT
CGGCATCGCTGCCACTGGTATGTCCGTTGGCATCTATCTCGGTCTCCGGG
ACCAACGCTCCCACATGGACGTGTACCGTCCGATCTGCATCAGCCATCTC
TCAAGAGGGTGCGCTCTAGCGGCTGCGCTCCATCCGGTTTGGTGAATTCC
TCGGCTGCCGTAGCTTCTCTGGAAAATTCCGCCGCCCCAAACCCAGCAGC
GACCACTACGGCTTTCACTACTTCCATGCGCGCATGCGTTGTGAGCGTGG
ATGGACAACCTCATCAATCGGCATCGCTGCCACTGGTATGTCCGTTGGCA
TCTATCTCGGTCTCCGGGACCAACGCTCCCACATTTGGAGTCAGTTGCAA
CGGAGACGGGTCGGGGTTGAGCCCGTCCGGCTTGCGGGGTTCGGACGCAG
AAGAGGAGCGTCTGTCGGGGTTGTCCGACTTCGAAGGCCTCATTGAGGAC
CAGTTGGAGTCAGTTGCAACGGAGACGGGTCGGGGTTGAGCCCGTCCGGC
TTGCGGGGTTCGGACGCAGAAGAGGAGCGTCTGTCGGGGTTGTCCGACTT
CGAAGGCCTCATTGAGGACCAGGATCTCACCGGCACCCCTCCGTTGGGGG
CCGTCTCCGACGAGAGCTGCGTGGCTGGAGCCAGCGGCATCGAAAACAAC
GCAGCAGCGGGTGGATCTCACCGGCACCCCTCCGTTGGGGGCCGTCTCCG
ACGAGAGCTGCGTGGCTGGAGCCAGCGGCATCGAAAACAACGCAGCAGCG
GGTGGGATGGACGAAGACGCCTTCGTCGCGGCGCTCCTCGACGGTTAGGG
ATGGACGAAGACGCCTTCGTCGCGGCGCTCCTCGACGGTTAG
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