mRNA_H-elongata_contig126826.1991.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI) HSP 1 Score: 326 bits (835), Expect = 4.830e-108 Identity = 154/218 (70.64%), Postives = 182/218 (83.49%), Query Frame = 3
Query: 294 GRILPFGTAIRYAASSSTSHGRKSRHEYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLGLVNREY 947
GR+ FGTA A SS K +H+++V RDL YSGWRK+VKKTV+ + EK ++FDVVHQE PSVAVFVWHT++ TLTLIKEF+PGRE VAHGVVAG+YEK+KHDSPLQAAK+ELEEEAHLLGGTWH+LC+D +TTINADKYSSNEFYCWLVVDPYVT TP+ +DDEE IEI RG++MQ M M+ GELSIVSSFV+L G RKLRQLGL+ ++
Sbjct: 21 GRLFSFGTARHCAGFSSPVGEGKPQHDFKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLLEGDF 238
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A7S3Y3W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W4_HETAK) HSP 1 Score: 178 bits (451), Expect = 9.960e-50 Identity = 86/212 (40.57%), Postives = 129/212 (60.85%), Query Frame = 3
Query: 312 GTAIRYAASSSTSHGRKSRHEYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQE-NPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLGLVNRE 944
G+ + ++S + +++ + YS WRK++++ V+ FD+VH + S+ VF W T ++T TL++EF PG + HGV AG+YE +KH SPL+AA+ ELEEEAHL GGTW ++ + +T I DKY++N +C+LV+DP PR LD EE IEI G T +M ++ G ++I+SS+ L KLR LGL+N E
Sbjct: 65 GSNVGESSSEVEEGSQVDESSFKILAERVAYSRWRKIIERDVELPNGTQCSFDIVHNDLEGSIVVFAWDTRAQTATLVREFQPGPMRLLHGVAAGMYEPNKHGSPLEAARMELEEEAHLTGGTWINMMDEGQT-ITVDKYNTNRVHCFLVLDPTPAPNPRALDAEEHIEIRPGATRGDIMGLITSGNMNIMSSYTCLLAFEKLRTLGLLNDE 275
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC) HSP 1 Score: 156 bits (394), Expect = 6.750e-42 Identity = 73/194 (37.63%), Postives = 116/194 (59.79%), Query Frame = 3
Query: 366 RHEYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLGLVNREY 947
R ++V G +VY GW+ V+ +T++ K+ +D+ H + P+V V W T+ KT +E+ PG G VAG+YE+ KH+SPL AAK ELEEEAHL+GG W +L + + ++ +KYS FY +L +DP T PR LDD E I + R + + V+ +G ++ +S L + KLR++G + +++
Sbjct: 34 REPFKVIGEQMVYQGWKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLINE-RGVMDYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGELPKDF 226
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.330e-40 Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 3
Query: 366 RHEYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQENP-SVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHD-SPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLG 929
+ ++ + ++VYS WRK++++ VQF + FD+V Q+ +V +F W +++KT TL++E++PG HGV AG+ E+ KH P AA+ ELEEE HL GG W+ L D T+ DKY E +LV+DP S PR LD EE IEI G+++ + +M+ G +++V + + + KLR+LG
Sbjct: 36 QQQHRIISDEVVYSRWRKIIRRVVQFPAGNTVDFDIVDQKGTGAVTIFAWCSKTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLTADG-ATVPMDKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELG 224
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: B8CE31_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE31_THAPS) HSP 1 Score: 147 bits (371), Expect = 4.070e-38 Identity = 81/211 (38.39%), Postives = 121/211 (57.35%), Query Frame = 3
Query: 369 HEYEVTGRDLVYSGWRKVVKKTVQ------------FDGE-KSFMFDVV---HQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDS--------PLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLG 929
H+Y + ++ YSGWRKV+++TV +D + K+ FDV+ H N +V +F W++ SKT T+++E+ PG V G+ AG+ E +KH S L AA+FELEEE HL GG W L ++ +I DKY E +LV+DP+ PR LDDEE IEI G+T++ + M+ G++++V F L + KLR+ G
Sbjct: 54 HDYTIVNDEVRYSGWRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQNHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLTENG-VSIPMDKYVVTEITPYLVIDPHHVPNPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFG 263
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.370e-36 Identity = 73/196 (37.24%), Postives = 114/196 (58.16%), Query Frame = 3
Query: 372 EYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQENP-SVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYE---KSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAK------TTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLG 929
EYE+ ++V+ WR ++ + V+ +DVV Q+ +V +FVW++++KT TL++E++PG + +GV AG+ E K H P QAA ELEEE HL GGTWH L + T++ DKY+ +LV+D + P+ DDEE IEI R +T+ V+ ++ GE+++V + L + KLR LG
Sbjct: 97 EYELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLG 292
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH) HSP 1 Score: 134 bits (336), Expect = 3.430e-34 Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 3
Query: 465 FDVVHQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLGL 932
+D++ Q++ SV VFVW T S T TL+KE+ PG V G VAG+ E KH S LQAA+ ELEEEAHL W+SL + + DKYS+N F +L +D + + LDDEE I I R +T +M ++ G++++VS++ I+ G++KL+ LG+
Sbjct: 10 YDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLLNEG-AIMPFDKYSNNRFIPYLALDCEPVKSAKPLDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLGI 164
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A4D9D3K8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3K8_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.560e-33 Identity = 74/188 (39.36%), Postives = 111/188 (59.04%), Query Frame = 3
Query: 390 RDLVYSGWRKVVKKTVQFDGEKSFMFDVVHQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCK-DAKTTINADKYSSNEFYCWLVVDPY--VTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLGLVNRE 944
+DL WR ++++ VQ+ + FDV+ Q SV VF+W++ S T TLI+E++PG V VAG E KH+ P AA ELEEEAHL GGTW +L + + + + ADKYS+ F+ +LVVDP V R DDEE + + R +T+ V ++ G++++ + L + KLR L L+ +E
Sbjct: 85 KDLYRGKWRSLLQRDVQYPDGRQVTFDVMDQPGSSVLVFIWNSTSHTTTLIEEYAPGSLQVIFTPVAGGCEDEKHEDPQHAAVLELEEEAHLKGGTWFNLLEGEGEEGVAADKYSTCPFHFYLVVDPVREVEKNARKRDDEELLVVHREVTLVEVRRLIRRGKMTVPGACASLLAMEKLRALKLLGKE 272
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A2C6KYJ8_9APIC (Nudix family protein n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KYJ8_9APIC) HSP 1 Score: 108 bits (271), Expect = 2.590e-24 Identity = 59/178 (33.15%), Postives = 103/178 (57.87%), Query Frame = 3
Query: 396 LVYSGWRKVVKKTVQFDGEKSFMFDVVHQENPSVAVFVWHTESKTLTLIKEFSPG-REVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQL 926
+ Y GWR V+K+TVQF K FD+ P+V V W ++++TLTL++E+ PG + + +VAG++E+ KH + ++E EEEA L GG + T+ KY++ +F ++V+D + R LDD+E I+ G+++ + ++ G ++ SS ++L + KLRQ+
Sbjct: 29 VAYKGWRNVIKRTVQFPNGKPVTFDITTAP-PAVLVLPWCSQTRTLTLLREYCPGLNDKHMYTLVAGLFEE-KHATIEDCIRWETEEEAQLRGGRLVPVMNSEDRTLPGAKYTAQKFIPYIVMDAEKVTDSRPLDDDEIIQPVHGVSVNEALWLIMNGRMTSTSSMMVLLALEKLRQM 204
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Match: A0A7S2ZFG6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD) HSP 1 Score: 102 bits (253), Expect = 1.770e-21 Identity = 60/189 (31.75%), Postives = 102/189 (53.97%), Query Frame = 3
Query: 372 EYEVTGRDLVYSGWRKVVKKTVQFDGEKSFMFDVV---HQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKHDSPLQAAKFELEEEAHLLGGTWHSLCKDAKTTINADKYSSNEFYCWLVVDPYVTSTPRVLDDEESIEIERGITMQRVMNMLDYGELSIVSSFVILAGVRKLRQLG 929
++ + + + ++ V ++ +++ K FDV + SV VF + T +KT+TL++E+ PG V G AG ++ KH S AA+ EL EEA L GG++ + + ++ DKYS N F+ +LV++P P D+EE I+I +G+T+ R+ +L G +++ S F G R L L
Sbjct: 39 KFSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGNPRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPMLESGG--VSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKILAQGGMNLPSGF---CGYRALDALS 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126826.1991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig126826.1991.1 >prot_H-elongata_contig126826.1991.1 ID=prot_H-elongata_contig126826.1991.1|Name=mRNA_H-elongata_contig126826.1991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp MFDVVHQENPSVAVFVWHTESKTLTLIKEFSPGREVVAHGVVAGVYEKSKback to top mRNA from alignment at H-elongata_contig126826:153..1832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig126826.1991.1 ID=mRNA_H-elongata_contig126826.1991.1|Name=mRNA_H-elongata_contig126826.1991.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1680bp|location=Sequence derived from alignment at H-elongata_contig126826:153..1832- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig126826:153..1832- >mRNA_H-elongata_contig126826.1991.1 ID=mRNA_H-elongata_contig126826.1991.1|Name=mRNA_H-elongata_contig126826.1991.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig126826:153..1832- (Himanthalia elongata Himel1 dioecious)back to top |