mRNA_H-elongata_contig12675.1985.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: D7FKK0_ECTSI (PIH1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK0_ECTSI) HSP 1 Score: 206 bits (524), Expect = 9.260e-58 Identity = 107/174 (61.49%), Postives = 126/174 (72.41%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRPGGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAF-RTNERKISIDK 521
EA KFK A+ +PEFQ+ML+DYMEEMQ E+QNRVPEGKEV+HP PGFVIKT++ +D EKLF NVV+S KLAKPYS S SRPGGE WSLPVAVG +R E + G + TTFDVCYHPEALV A +AFR+LV LSSLERV+DAF R + KI++DK
Sbjct: 29 EATKFKTALGEPEFQAMLRDYMEEMQDPKQRAEQELYISELESQNRVPEGKEVVHPLPGFVIKTRFTRGSKDAEPEKLFTNVVTSDKLAKPYSKISNSRPGGEAWSLPVAVGPLRKEKDKGGGSTTTFDVCYHPEALVRADRLSAFRDLVVLSSLERVEDAFLRGTKEKITVDK 202
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A6H5JI76_9PHAE (PIH1_CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI76_9PHAE) HSP 1 Score: 185 bits (469), Expect = 5.060e-46 Identity = 127/387 (32.82%), Postives = 177/387 (45.74%), Query Frame = 3
Query: 882 ATTLPEGHKKGNAGAIYKLVESGCFEMADHTSERERETRLPQNLIVTVTLPPTAESMDKLDVLITSRRLAVCVIDDPDESTPRYLDLALPYDVEDESKCTAKRDKTGLLKIVMPVKLPSKRPLSTAGALAPSTSA--------------------ANDAEESLLGEER---VFLDASESQALASTENRQAKPDHSRWVKDNEQSEDFDKPWEAISKREDTETSTADEMGAVHATFPPPPDVQRRSDGDVGSLIDHPRK---------------------------------------------------------------------QNLDIERGITEDA--AFIGCSKFAGNIEGYEFKTDLQGCGYYRDDRDKKVPRMRWDQTLK 1760
A L G K+G G YKLVESG FE++DHT++R R+T P+ L+VTV LP AES KLDV++ R+L + V+ DP+ S+PRYLDL LPYDVED+SKC+A RDK+GLLKI MPVK P+ PL+ L + +A + + +E+L EE + + +E + + +Q PDHSRWV + QSE KPWEA+ + ++ G + P P ++ D+E + ED FI +F ++GYEFKT +GCGYYRDD KKVPR+ W++ +K
Sbjct: 63 AEQLAPGLKRGFGGTTYKLVESGAFEISDHTTDRVRQTPTPRTLVVTVILPADAESTRKLDVVVALRKLTIGVLGDPEGSSPRYLDLPLPYDVEDDSKCSAVRDKSGLLKITMPVKQPAAPPLTVPPPLPAAATARVCSDGGRGGAAAATDIDGVSEEHKETLPDEELKHDITTNKAEQTSASPDTTQQCNPDHSRWVDEAPQSEVLQKPWEALP-------APPEKQGEARSLLPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGEDNDLEEQLAEDKDKLFIQSERFIRKVDGYEFKTGAKGCGYYRDDSRKKVPRISWNENIK 442
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: D7FKJ9_ECTSI (PIH1_CS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ9_ECTSI) HSP 1 Score: 150 bits (380), Expect = 8.390e-37 Identity = 102/232 (43.97%), Postives = 136/232 (58.62%), Query Frame = 3
Query: 573 MLVSKSDLNQPLPSASVNGDNDVQAAAIPSTEAKGRTRNPMERGQGRRPARKGASNAEIPPPAPIA--NGVADRKPSVAKLGSVAGAAGEGYVREGAETTANIKTATT---LPEGHKKGNAGAIYKLVESGCFEMADHTSERERETRLPQNLIVTVTLPPTAESMDKLDVLITSRRLAVCVIDDPDESTPRYLDLALPYDVEDESKCTAKRDKTGLLKIVMPVKLPSKRPLS 1253
M+V+K+D+N+ S + AAA S EAK R+ ++ S A P + +A NG A R A AG +G A A + +T L G ++G+ GA YKLVESG FE++DHT++R R+T P+ L+VTVTLP A KLDV++ RRL + V+ DP+ S+PRYLDL LPYDVEDESKC+A RDK+GLLKI MPVK P+ PL+
Sbjct: 1 MMVAKADINRATDSQPIAPP---VAAAAASAEAKTSQRDA---------GKEIKSKANRPQTSAVADDNGAALRSAGAAAEPKKAG---DGESPSPASAPAEKEQSTPAEQLAPGLRRGSGGATYKLVESGAFEISDHTTDRVRQTPTPRTLVVTVTLPADAGPTRKLDVVVAVRRLTIGVLSDPEGSSPRYLDLPLPYDVEDESKCSAARDKSGLLKITMPVKQPAAPPLT 217
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: W4GLA3_9STRA (Protein kintoun n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLA3_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.010e-36 Identity = 130/427 (30.44%), Postives = 188/427 (44.03%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRP---GGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRTNERKIS-IDKGYRILKGVKYKSGGCATMLVSKSDLNQPLPSASVNGDND-------VQAAAIPSTEAKGRTRNPMERGQGRRPARKGASNAEIPPPAPIANGVADRKPSVAKLGSVAGAAGEGYVREGAETTANIKTATTLPEGHKKGNAGAIYKLVESGCFEMADHTSERERETRLPQNLIVTVTLPP-TAESMDKLDVLITSRRLAVCVIDDPDESTPRYLDLALPYDVEDESKCTAKRDK-TGLLKIVMPVKLPSKR 1244
E + F +AM DP+F+S+L +YM E+ EN+N+VP K+++ P PGFV+KTKY ++ K+FVNV SS K+ P ST S P GG W+LP VG RLE + G TFDVCYHP+ + A AF ++ ++L+ VD F T + S +D+ Y ILKG+ YKSG TM ++ + P +A +D + A S A G T P AP+ ++ T LP Y++ G F++ADH RE ++ P++L+V +TLP T+ + LDV T+ R+ P +DL P+ V E+ AK DK T L + +PV P R
Sbjct: 33 EQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGKAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAAAPATPPSRAAPSTSSSDKPKPRAVTMSTATVSHAASGPT-------------------THSKPKAPLIQDISSXXXXXXXXXXX-----------------XXXTPPVLPS--------IAYQITHRGQFDLADHIESREAKSFRPRDLVVRMTLPTHTSAAGIDLDVSATAVRVTAAGY------APLAIDL--PFSVV-EASGKAKFDKATKTLIVTLPVVAPPVR 399
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A6A4ZZ14_9STRA (PIH1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZ14_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.550e-36 Identity = 81/205 (39.51%), Postives = 114/205 (55.61%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRP---GGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRTNERKIS-IDKGYRILKGVKYKSGGCATMLVSKSDLNQP 605
E + F +AM DP+F+S+L +YM E+ EN+N+VP K+++ P PGFV+KTKY ++ K+FVNV SS K+ P ST S P GG W+LP VG RLE + G TFDVCYHP+ + A AF ++ ++L+ VD F T + S +D+ Y ILKG+ YKSG TM ++ + P
Sbjct: 33 EQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGQAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAGAPATPP 230
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A024TPK8_9STRA (Protein kintoun n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPK8_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.770e-34 Identity = 129/420 (30.71%), Postives = 190/420 (45.24%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRP---GGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRTNERKIS-IDKGYRILKGVKYKSGGCATMLVSKSDLNQPLPSASVNGDNDVQAAAIPSTEAKGRTRNPMERGQGRRPARKGASNAEIPPPAPIANGVADRKPSVAKLGSVAGAAGEGYVREGAETTANIKTATTLPEGHKKGNAGAIYKLVESGCFEMADHTSERERETRLPQNLIVTVTLPPTAESMD-KLDVLITSRRLAVCVIDDPDESTPRYLDLA--LPYDVEDESKCTAKRDK-TGLLKIVMPVKLPS 1238
E + F +AM DPEF+++L DYM+E+ EN N+VP K+++ P PGFV+KTKY ++ K+FVNV SS K+ P ST S P GG W+LP VG R+E + G + T+DVCYHP ++ A AF ++ ++L+ VD + + S +++ Y +LKGV YKSG TM L P P T R + P RR + + A A+ P + +P LGS ++E + + + Y++ G F++ADH RE + P++L+V + LP A + LDV T+ R+ Y LA LP+ V E+K AK DK T L + +PV PS
Sbjct: 33 EQQSFLKAMKDPEFRTLLNDYMQEISDPAHRAEQEMYLRQLENDNKVPTDKQLVLPKPGFVVKTKY-------KQRKIFVNVCSSEKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRMEPDKGGQSIATYDVCYHPRTVLQAMQSAAFMKMLINTALDGVDKVYENIDPDPSKVERDYHVLKGVSYKSGTPVTMC-----LTTPKP-----------------TTDPSRPKQPT-----RRASLEPAVVAQAKPESASPXXXXXXEP----LGS------SPLIQE-------LSXXXXXXXSNPRPLPTIAYRITHRGQFDLADHIDNREAKAFRPRDLVVKMALPSHASAAGIDLDVSSTAVRVTAA----------GYAPLAFELPFPVV-EAKGKAKFDKATKTLVVTLPVVEPS 390
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A7S2CZE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZE5_9STRA) HSP 1 Score: 149 bits (376), Expect = 7.130e-34 Identity = 77/204 (37.75%), Postives = 118/204 (57.84%), Query Frame = 3
Query: 12 KFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQ---NRVPEGKEVIHPSPGFVIKTKYAYN--------VEDDRREKLFVNVVSSSKLAKPYSTPSRSRPGGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDA-FRTNERKISIDKGYRILKGVKYKSGGCATMLVSK 587
KF+++ DPEF+SM Y++E+ EN ++VPEGKE+I P P FV+KTK Y V D++ KLF+N+V S K+ P + P++ GG W+LP+ +G RLE R+G A TFD C+HPEAL A F++L+ ++++ V+ A + ++K +D+ Y +L+GV YK+G A M+V K
Sbjct: 25 KFRKSFEDPEFRSMFSSYLDEISDPKHRAETDAYISQLENDPSGSKVPEGKELIRPKPAFVVKTKAKYQAPSMEEGKVNDEKDYKLFINIVQSDKVGAPVAQPAQ---GGTQWTLPICLGPKRLENDRNGSTAPTFDACFHPEALTQALRSKPFKDLIVQTAIDNVEAAVLQVTKQKTKLDRKYHVLRGVTYKNGDPAIMMVPK 225
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A397BQP2_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BQP2_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.010e-33 Identity = 81/205 (39.51%), Postives = 114/205 (55.61%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRP---GGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRTNERKIS-IDKGYRILKGVKYKSGGCATMLVSKSDLNQP 605
E + F +AM DP+F+S+L +YM E+ EN+N+VP K+++ P PGFV+KTKY ++ K+FVNV SS K+ P ST S P GG W+LP VG RLE + G TFDVCYHP+ + A AF ++ ++L+ VD F T + S +D+ Y ILKG+ YKSG TM ++ + P
Sbjct: 129 EQQSFLKAMKDPDFRSLLNEYMHEISDPAHRAEQELYLRQLENENKVPTDKQLVLPKPGFVLKTKY-------KQRKIFVNVCSSDKMQPPSSTRVASTPSTAGGTSWNLPYCVGPQRLEPDKGGQAIATFDVCYHPQTISRAMESAAFMKMLVNTALDGVDKVFHTLDVDPSKVDREYHILKGIAYKSGNPVTMCIAGAPATPP 326
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A329SGH6_9STRA (Protein kintoun n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SGH6_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.950e-33 Identity = 127/425 (29.88%), Postives = 199/425 (46.82%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRPGGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRTNERKIS--IDKGYRILKGVKYKSGGCATMLVSKSDLNQPLPSASVNGDNDVQAAAIPSTEAKGRTRNPMERGQGRRPARKGASNAEIPPPAPIANGVADRKPSVAKLGSVAGAAGEGYVREGAETTANIK---TATTLPEGHKKGNAGAIYKLVESGCFEM-----ADHTSERERETRLPQNLIVTVTLPPTAESMDKLDVLITSRRLAVCVIDDPDES-TPRYLDLALPYDVEDESKCTAKRD-KTGLLKIVMPVKLPSK 1241
E KF AM DPEF+S+L +YM+E+ EN+ +VP K+++ P+PGFV+KTK+ + +K+F+NV SS K+ P ST S G W+LP +VG RLE + G NA FDVC+HP + + +R++V + L+ V+ R + K + + Y +LKGV YKSG TM + K ++ S VQA + A+ + R P+E E G AD K +++L V EGAE ++++ ++ L + K ++L+ G FE+ AD + P+ L+V + P + S LD+ ++ + L + P S L+L+LP+ V E K +AK D K L + +PV+ P K
Sbjct: 51 EQTKFLSAMKDPEFRSLLNEYMQEISDPRNREETERYLSQLENEQKVPTDKQLVKPTPGFVVKTKW------ENAQKIFINVCSSDKMQPPSSTRVTSGQQGTSWNLPYSVGPERLEPDKGGANAPAFDVCFHPRVIEFSMTREDYRHMVISTCLDAVEPIMRESRHKPDALLARNYHVLKGVLYKSGDPVTMCLRKE--HEAPESVKTKKKTAVQAVKQTKSAAEDKNRPPLET----------IKRVE---------GKAD-KSVLSQLTQV----------EGAEQSSSLMKEVSSVKLEQSDKPKKKKMEHQLIYRGRFELLHHMQADPDKNVPEDRYRPKELVVEINFP-LSSSAKGLDLDVSEKMLRLSA--GPSVSGNYEPLELSLPFPVI-EDKGSAKFDRKNHKLIVTLPVQPPPK 433
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Match: A0A6U1AP86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AP86_9STRA) HSP 1 Score: 139 bits (350), Expect = 8.800e-33 Identity = 74/202 (36.63%), Postives = 119/202 (58.91%), Query Frame = 3
Query: 3 EAKKFKEAMADPEFQSMLKDYMEEMQXXXXXXXXXXXXXXXENQNRVPEGKEVIHPSPGFVIKTKYAYNVEDDRREKLFVNVVSSSKLAKPYSTPSRSRPGGEMWSLPVAVGQMRLEMGRSGDNATTFDVCYHPEALVLAQHGNAFRNLVALSSLERVDDAFRT------NERKISIDKGYRILKGVKYKSGGCATMLVSKS 590
E KF+ A DP+F+ ML DYM+E+ EN+++VPEGKE++ PS FV+KT + + + + K+F+NVV S K+A+P +TP + GG +SLP+++G R+E + G TFD C+HP+AL LA+ F++LV +++E V+ +E+ + I Y LKG+ YK+G A M+++K+
Sbjct: 44 EEHKFRNAFGDPKFREMLADYMDEISDPKHRAEQEAYITKLENEDQVPEGKELVRPSAAFVVKT-HTEDADKAKGSKVFINVVQSDKIAEPKATPQK---GGVSYSLPLSLGPKRMESDKGGATVPTFDACFHPKALQLAKRDKRFKDLVVKTAMEHVEQQMNAGVSPARHEKLVPI---YHTLKGIDYKNGTPAIMMMNKA 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12675.1985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12675.1985.1 >prot_H-elongata_contig12675.1985.1 ID=prot_H-elongata_contig12675.1985.1|Name=mRNA_H-elongata_contig12675.1985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=671bp MADPEFQSMLKDYMEEMQNPTVRAEQEKYITELENQNRVPEGKEVIHPSPback to top mRNA from alignment at H-elongata_contig12675:233..6630- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12675.1985.1 ID=mRNA_H-elongata_contig12675.1985.1|Name=mRNA_H-elongata_contig12675.1985.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6398bp|location=Sequence derived from alignment at H-elongata_contig12675:233..6630- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12675:233..6630- >mRNA_H-elongata_contig12675.1985.1 ID=mRNA_H-elongata_contig12675.1985.1|Name=mRNA_H-elongata_contig12675.1985.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4026bp|location=Sequence derived from alignment at H-elongata_contig12675:233..6630- (Himanthalia elongata Himel1 dioecious)back to top |