mRNA_H-elongata_contig126624.1979.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig126624.1979.1
Unique NamemRNA_H-elongata_contig126624.1979.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 311 bits (797), Expect = 1.310e-98
Identity = 179/407 (43.98%), Postives = 238/407 (58.48%), Query Frame = 1
Query:   13 LLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWALRWV-------DTNQNGHI-------------FYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAGHAAL 1173
            L+  S  G + HG++ + A+ F C + TI R+W +     +   L  D+G++ K  +GRK     DL Q++  IP  +RTT +R+AS + +P  +LHR  K   L  HSS LKPLLT A +  RL+WA ++V       D     HI              YL   +EPP R TQSKRFITKVM L+AVARPRW+ N    F+GKIG WHF E  PAQR S NR  G LVT  V V++ +Y++ML++NVIPAIK KWP   R   I IQQDNARPH   +D  +L AC +  +D+ +  QPPNSPD N+LDLG F +IQSLQ+RTR RTID+LI     A     A  L   + T+QSC+ +T+   G N YKVPH+ K    + G   D  ++C  + +  G A +
Sbjct:   21 LVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRK-KKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFVGPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWP-DARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQGRLPD-AIECPRDVFDHGLALM 424          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 292 bits (747), Expect = 1.570e-91
Identity = 170/426 (39.91%), Postives = 241/426 (56.57%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL------------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVE-VTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAG----HAALQAGQAQ 1191
            IV +LL  SD G I  G  + A  ++     TI RLW  +K    +     +L +   GN GRK +   +L+ Q++ IPL  R T + LA++LG+    + R LK    R HSS +KP LT   RL R+++AL                        +W + + +   +YL  ++E PVR+ QSKRFI+K M +AAVARPR+D++    F+GKIG+W F E   A+R S NR +G +V R VE V +++YK   I ++IPAIK KWP   +   IYIQQDNA+PH  + DPD++ A  SG +D+++  QPPNSPD N+LDLG F SIQSLQ +T  R ++ L+  V+ A     AD L K++ T+Q+C+E  +   G N YK PH GKD   + G  +     CS E +  G     AAL+A + Q
Sbjct:   14 IVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAGQ-LPVSFACSAEVYDQGVKFVRAALEAKKVQ 438          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.260e-88
Identity = 158/402 (39.30%), Postives = 228/402 (56.72%), Query Frame = 1
Query:   34 GVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL--------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAGHAALQA 1179
            G + +G++   A +F C ++T+ RLW +         L  D+ +++KG AGRK +   DL +++  IP  +RTT + +A  + +P++TL    K   L  HSS++KP LT A +  RL+WA                     +W    +     YL   +EPP R T+SKRFITKVM L+AVARPRW+ N +  F+G+IG WHF +  PAQR S NR    +VT    VT+ +Y++MLIDNVIPAIK KWP   +  RI +QQDNARPH  LSD  +  AC S  + ++++ QPPNSPD N           +LQ+RTR +TID+LI     A     A  L   + T+Q+CL + +   G N YK+PH+GK + A+ G  +   ++C  + +  GHAA+ A
Sbjct:   31 GKLPYGSFRNVAAQFACNWQTVARLWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERLGPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP-NDKAARILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMN-----------TLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVRAGGGNNYKIPHMGKKKLAKQGL-LPESVECPRDVFNFGHAAIGA 418          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA)

HSP 1 Score: 281 bits (720), Expect = 7.700e-87
Identity = 160/396 (40.40%), Postives = 234/396 (59.09%), Query Frame = 1
Query:    1 IVRWLLTH-SDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQ-HDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWALRWVDT-NQNGHIF-----------------------YLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTG 1110
            +++ LLT  + K ++ HGA+   A  FG    T++ +W +  V  +D+     D+ ++ KG+ GR  +    +  +LQ +P  +RTT R +A++L +PR+TLH   K      +SS+++P LT + ++ R++WAL +V   N+N ++F                       YL   +EPP R  +SK+FITKVM L+AVARPRWDS     F+GK+G WHF  + PA RGS NR  G LVT  V VT+  YK ML+D+VIPAIK+KWP+ T  ++I IQQDNARPH    D D++ ACTS  + +++  QPPNSPD NILDLG F +IQSLQ +  +R ID +++    A     +  L   + T+Q CL++ +   G N YK+PH+ K   A  G
Sbjct:   36 VLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGRN-LKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRMGGNNNYKIPHMKKAALAARG 429          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.750e-86
Identity = 165/420 (39.29%), Postives = 229/420 (54.52%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIK--HGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSP------DLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL---------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAGHAAL 1173
            +V  LL    KG  K   GA    A+ FG    TI  +W +  V    G L        D+ +++KG  GRK +   DL ++++ +P  +RTT   +A ++GIP +TL    K   L  ++S +KP LT   +  R++WA+                     +W +  +    FYL   + PP R TQSKRFITKVM L AVARPRWD   S  ++GKIG WHF E  PA R S NR  G L  R + VT+  YK MLIDNVIPAIK KWPA +    + IQQDNARPH    D  ++ ACTS  + + L  QPPNSPD N+LDLG F +IQSLQ    + T  +++   + A +      L + + T+Q CL + ++ AG+N+YKVPH+ K+   ++G  +   + CSE+ +  GH  L
Sbjct:   27 VVDHLLLRIVKGPCKLQRGAIQDVARMFGRNRHTIADIWKRANVSLGNGDLPARELVCEDVSSQKKGRVGRK-LKYNDLPERIRAVPAAQRTTLSYVAHAIGIPVSTLKDYYKRGTLVKYNSHVKPKLTDVNKTARVKWAMDFVHPTELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRTTQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAESSRS-VVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIMAAGDNSYKVPHMKKEALKKSGK-LPESVMCSEDVFETGHGLL 443          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA)

HSP 1 Score: 274 bits (701), Expect = 1.250e-84
Identity = 164/407 (40.29%), Postives = 228/407 (56.02%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL-------------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVE-VTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSE 1143
            IV+ LL +S  GV++ GA  +AA+ F    +TI RLW       + G  +  +G  +    G K   V ++K  ++ + + ER++ R +A  LG+ + T+ R +K   LRPH+SA+KP LT   +L RL+W L                         +W    ++   +YL  ++E P R  +SKRFITKVM L AV RP +  N    F+GK+G++ F E  PAQR S NR RG L T+ +  VT+   +  LI+ +IPAI  KWP     E IYIQQDNA+PH   +DP+  +A  S  F +QLI QPPNSPDTNILDLG F +IQSL+D+     +D+L+  VSMA E      L KV+ T+QS L + L   G N YK+PH+ KDR  R G A+   L+  E
Sbjct:   18 IVQHLLKNSQGGVLRKGAVCEAAEAFAVNRKTISRLWKAATEMMENGEPAHMVGKVKGYKRGEK-KKVDEVK--VRSLSVLERSSYRVMAPKLGVSKTTICRWVKDKQLRPHTSAIKPHLTDLNKLARLKWCLSQLQPNIIARTVAFNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKE-IYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIG-ALPNVLEVEE 419          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: UPI001C25C437 (uncharacterized protein LOC121757542 n=7 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25C437)

HSP 1 Score: 273 bits (699), Expect = 5.130e-84
Identity = 153/396 (38.64%), Postives = 229/396 (57.83%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL-------------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVE-VTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTG 1110
            I ++LL  S  GV+  G++T+AAK FG   RT  R+W   K Q D+G   P +   R      K   ++D +++ + + + ER+T R++AS + + ++T+ R +K+  L+PH+SA+KP LT A +L R++W L                         +W    +    +YL  +++ P R  +SKRFITKVM +AAV+RP + S+    F+GKIGL+ F E  PAQR S NR +G + T+ ++ + K+     L++ +IP IK KWPA    ++I+IQQDNA+PH   +D       ++  F+  LI+QPPNSPDTN+LDLG F +IQSLQD   A  +D L+  V  + E  +   L +V+ T+QSCL   L   G+N Y +PHL KDR  RTG
Sbjct:   44 IAQFLLQQSKAGVLPRGSFTEAAKRFGIHKRTTLRIWKVSKQQMDRG--EPVIMRSRASGYQHKDKLMLD-EEKFRNLSMLERSTIRKVASKMEVSKSTIGRFIKSRQLKPHTSAIKPTLTEANKLARMKWCLSHIQPTLEEGKLLYHSMHNIIHIDEKWFYMTKTSDRYYLLPDEDVPYRSCKSKRFITKVMFMAAVSRPLFGSDGETIFDGKIGLFPFTEEVPAQRRSKNRPKGTIETKPIQSINKEVVTACLLNQIIPTIKAKWPANAS-KKIFIQQDNAKPHLRAADQQFESLASTDGFEFHLISQPPNSPDTNVLDLGYFRAIQSLQDDKIATNVDDLLRNVFTSFEELSPQTLNRVFITLQSCLTAILQVHGKNDYNIPHLNKDRLQRTG 435          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: W2QKX2_PHYPN (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QKX2_PHYPN)

HSP 1 Score: 268 bits (684), Expect = 1.500e-82
Identity = 159/402 (39.55%), Postives = 221/402 (54.98%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWALRWVDTNQNG-----------HI-------------FYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVE-VTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCL 1131
            IV +LL  SD G I  G  + A  ++     TI RLW  +K    +     +L +   GN GRK +   +L+ Q++ IPL  R T + LA++LG+    + R LK    R HSS +KP LT   RL R+++AL      + G           HI             +YL  N+E PVR+ QSKRFI K M +AAVARPR+D++    F+G IG+W F E            +G +V R VE V +++YK  LI ++IPAIK KWP   +   IYIQQDNA+PH  + DPD++ A  SG +D+++  QP NSPD N+LDLG F SIQSLQ +T  R ++ L+  V+ A     AD L K++ T+Q+C+E  +   G N YK PH GKD   +  +   R L
Sbjct:   14 IVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTRTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKRFNEDTDRKCYYLDANEEEPVRQRQSKRFICKTMFIAAVARPRYDAHRKQAFDGTIGIWAFAEEP----------KGIIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPLNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKPASYQCRSL 405          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 269 bits (687), Expect = 1.630e-82
Identity = 154/409 (37.65%), Postives = 230/409 (56.23%), Query Frame = 1
Query:    1 IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQ-QLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWAL-------------------------RWVDTNQNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVE-VTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEE 1146
            +V++LL HS  GV++ G   +AA EF    +T+ RLW   K Q  QG  +   G  +    G +    ++L + +++ + + +R++ R +A +L + + T+H  +K   LRPH++A+KP LT   +L RL+W L                         +W    +    +YL  +++ P R  +SKR+ITKVM + AV+RP++DS     ++GK+G++ F E  PAQR S NR RG L T+ +  + K+  +  +I  +IPAIK KWP     E IYIQQDNA PH   +DP+      S  F + LI QPPNSPDTNILDLG F +IQSLQ +   R +D+L+  V  A E      L +V+ ++Q+CL Q L   G+N+YKVPH+ KDR  RTG  +   L+  E+
Sbjct:   20 VVQFLLKHSHLGVLRRGTVMEAAGEFSISRKTVYRLWKVAKDQMQQGEPAIMEGKLK----GYQHADKLNLDEDKVRNLSILQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKE-IYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTG-GLPNVLEVDED 422          
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.040e-82
Identity = 150/411 (36.50%), Postives = 225/411 (54.74%), Query Frame = 1
Query:   19 THSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLSPDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATLHRNLKTLGLRPHSSALKPLLTPAGRLERLRWALRWVDTN--------------------QNGHIFYLYDNQEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSPAQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERIYIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFASIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLCAGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAGHAALQAGQAQ 1191
            +H +  V+  GA   AA  F    +TI R+W +YK   D         + R+   GRK + + DL   ++ +P+ +R   R L++  GIP+++LHR ++   +R H+   KPLLT   +L+R+ W L  +D N                    +     YL   +  P   ++SK  +TKVM L A ARPRWD+N    F+GKIG+W F  + PA+R S NR +G LVT+   V  + YK ML++ V+PAI +KWP G+    I+IQ+DNA+PH      ++  A  S  +++ +  QPPNSPD N+LDLG F SIQSLQ + R++ ID LI  V  A +    + L  V+ ++Q+C+E +L   G+N YK+PH+GK    R GT +   + C  +   AG A L   +A+
Sbjct:  124 SHGEDKVLARGAQKAAAVVFQTSPKTISRIWKRYKETCDPINCPAGNVSNRRNRCGRKQMHLEDLDALVRRVPMKDRGDLRTLSAVTGIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNGRFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGT-LPISIICDPDRINAGRALLAQAEAE 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126624.1979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485KBU5_9STRA1.310e-9843.98Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
W2NW41_PHYPR1.570e-9139.91HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
W4FAY9_9STRA1.260e-8839.30Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A4Z2B2_9STRA7.700e-8740.40Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A6A4Z322_9STRA1.750e-8639.29Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI001C256EBA1.250e-8440.29uncharacterized protein LOC121779336 n=3 Tax=Salvi... [more]
UPI001C25C4375.130e-8438.64uncharacterized protein LOC121757542 n=7 Tax=Salvi... [more]
W2QKX2_PHYPN1.500e-8239.55HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
UPI0020091A081.630e-8237.65uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
A0A448ZNT1_9STRA2.040e-8236.50Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126624contigH-elongata_contig126624:121..1413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score280.0
Seed ortholog evalue1.7e-72
Seed eggNOG ortholog38727.Pavir.Eb00546.1.p
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493,3IN2T@38820,3M2XW@4447
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1221
Cds size1221
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929750.2179918-CDS-H-elongata_contig126624:120..9171622929750.2179918-CDS-H-elongata_contig126624:120..917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig126624 121..917 -
1691679142.9823549-CDS-H-elongata_contig126624:120..9171691679142.9823549-CDS-H-elongata_contig126624:120..917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig126624 121..917 -
1622929750.2309685-CDS-H-elongata_contig126624:989..14131622929750.2309685-CDS-H-elongata_contig126624:989..1413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig126624 990..1413 -
1691679142.9936426-CDS-H-elongata_contig126624:989..14131691679142.9936426-CDS-H-elongata_contig126624:989..1413Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig126624 990..1413 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126624.1979.1prot_H-elongata_contig126624.1979.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig126624 121..1413 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig126624.1979.1

>prot_H-elongata_contig126624.1979.1 ID=prot_H-elongata_contig126624.1979.1|Name=mRNA_H-elongata_contig126624.1979.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=407bp
IVRWLLTHSDKGVIKHGAYTKAAKEFGCEYRTIKRLWNKYKVQHDQGFLS
PDLGNKRKGNAGRKGVPVIDLKQQLQYIPLGERTTQRRLASSLGIPRATL
HRNLKTLGLRPHSSALKPLLTPAGRLERLRWALRWVDTNQNGHIFYLYDN
QEPPVRKTQSKRFITKVMCLAAVARPRWDSNASFRFNGKIGLWHFFERSP
AQRGSGNRARGELVTRCVEVTKQSYKNMLIDNVIPAIKQKWPAGTRHERI
YIQQDNARPHSVLSDPDLLQACTSGRFDLQLINQPPNSPDTNILDLGCFA
SIQSLQDRTRARTIDQLITKVSMALEVAAADKLAKVWTTMQSCLEQTLLC
AGENTYKVPHLGKDRAARTGTAIDRCLQCSEEAWAAGHAALQAGQAQGGQ
AQGGSA*
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mRNA from alignment at H-elongata_contig126624:121..1413-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig126624.1979.1 ID=mRNA_H-elongata_contig126624.1979.1|Name=mRNA_H-elongata_contig126624.1979.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1293bp|location=Sequence derived from alignment at H-elongata_contig126624:121..1413- (Himanthalia elongata Himel1 dioecious)
ATTGTTCGGTGGCTGCTGACCCACAGCGACAAGGGCGTCATCAAGCATGG AGCCTACACCAAGGCGGCAAAGGAGTTTGGCTGCGAGTACCGTACGATTA AGAGGCTGTGGAACAAATACAAGGTCCAGCATGATCAAGGATTTCTCTCC CCGGATTTGGGCAACAAGAGGAAGGGGAATGCCGGACGAAAGGGCGTCCC TGTGATTGATCTAAAGCAGCAACTCCAATACATCCCACTCGGTGAGCGGA CGACACAGCGGCGCCTGGCTTCCTCCCTTGGAATACCCCGGGCGACGCTT CACAGAAACCTCAAGACCCTGGGGCTACGGCCGCACTCATCTGCACTCAA ACCGCTTCTCACGCCAGCGGGGAGGCTGGAAAGACTTAGGTGGGCCCTGC GATGGGTTGACACAAACCAGAACGGTGTGGGGAGATTCCACCATTTCGAG AACTTCGTCGACGTGGATGAAAAGTGGTTTTACCTTTACGTCGAAGGACA TATATTCTACCTCTACGACAACCAGGAACCCCCAGTCCGGAAGACACAGA GCAAGCGTTTCATCACGAAAGTGATGTGTCTCGCGGCGGTGGCTCGCCCG CGATGGGACAGCAATGCAAGCTTCCGCTTCAACGGCAAGATCGGCCTGTG GCACTTCTTCGAGCGGTCACCTGCACAACGCGGCAGCGGCAACCGTGCAA GAGGGGAGCTGGTGACGAGGTGTGTGGAGGTCACCAAGCAGTCGTACAAA AATATGCTCATCGACAACGTGATCCCTGCCATCAAGCAGAAATGGCCCGC CGGGACTAGGCACGAGCGAATCTACATCCAGCAGGATAACGCGCGCCCGC ACTCTGTGCTCAGCGACCCGGACCTTTTGCAAGCGTGCACTTCAGGTCGG TTCGACCTGCAGCTCATCAACCAGCCGCCAAACAGCCCGGACACAAACAT CCTGGACTTGGGATGTTTCGCTTCCATCCAGTCCCTGCAGGACCGCACTC GCGCCAGGACAATCGACCAACTCATCACCAAGGTCAGCATGGCGTTGGAG GTGGCGGCCGCGGATAAACTCGCCAAAGTTTGGACCACAATGCAGAGCTG CCTGGAGCAGACTTTGCTATGTGCAGGGGAGAACACGTACAAGGTGCCCC ACCTAGGGAAGGACAGAGCTGCCCGTACGGGGACGGCAATCGACCGGTGC TTGCAGTGCTCTGAGGAGGCGTGGGCGGCAGGACACGCGGCGCTTCAGGC GGGACAGGCGCAAGGGGGACAGGCGCAAGGGGGGTCGGCATAA
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Coding sequence (CDS) from alignment at H-elongata_contig126624:121..1413-

>mRNA_H-elongata_contig126624.1979.1 ID=mRNA_H-elongata_contig126624.1979.1|Name=mRNA_H-elongata_contig126624.1979.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2442bp|location=Sequence derived from alignment at H-elongata_contig126624:121..1413- (Himanthalia elongata Himel1 dioecious)
ATTGTTCGGTGGCTGCTGACCCACAGCGACAAGGGCGTCATCAAGCATGG
AGCCTACACCAAGGCGGCAAAGGAGTTTGGCTGCGAGTACCGTACGATTA
AGAGGCTGTGGAACAAATACAAGGTCCAGCATGATCAAGGATTTCTCTCC
CCGGATTTGGGCAACAAGAGGAAGGGGAATGCCGGACGAAAGGGCGTCCC
TGTGATTGATCTAAAGCAGCAACTCCAATACATCCCACTCGGTGAGCGGA
CGACACAGCGGCGCCTGGCTTCCTCCCTTGGAATACCCCGGGCGACGCTT
CACAGAAACCTCAAGACCCTGGGGCTACGGCCGCACTCATCTGCACTCAA
ACCGCTTCTCACGCCAGCGGGGAGGCTGGAAAGACTTAGGTGGGCCCTGC
GATGGGTTGACACAAACCAGAACGATTGTTCGGTGGCTGCTGACCCACAG
CGACAAGGGCGTCATCAAGCATGGAGCCTACACCAAGGCGGCAAAGGAGT
TTGGCTGCGAGTACCGTACGATTAAGAGGCTGTGGAACAAATACAAGGTC
CAGCATGATCAAGGATTTCTCTCCCCGGATTTGGGCAACAAGAGGAAGGG
GAATGCCGGACGAAAGGGCGTCCCTGTGATTGATCTAAAGCAGCAACTCC
AATACATCCCACTCGGTGAGCGGACGACACAGCGGCGCCTGGCTTCCTCC
CTTGGAATACCCCGGGCGACGCTTCACAGAAACCTCAAGACCCTGGGGCT
ACGGCCGCACTCATCTGCACTCAAACCGCTTCTCACGCCAGCGGGGAGGC
TGGAAAGACTTAGGTGGGCCCTGCGATGGGTTGACACAAACCAGAACGGA
CATATATTCTACCTCTACGACAACCAGGAACCCCCAGTCCGGAAGACACA
GAGCAAGCGTTTCATCACGAAAGTGATGTGTCTCGCGGCGGTGGCTCGCC
CGCGATGGGACAGCAATGCAAGCTTCCGCTTCAACGGCAAGATCGGCCTG
TGGCACTTCTTCGAGCGGTCACCTGCACAACGCGGCAGCGGCAACCGTGC
AAGAGGGGAGCTGGTGACGAGGTGTGTGGAGGTCACCAAGCAGTCGTACA
AAAATATGCTCATCGACAACGTGATCCCTGCCATCAAGCAGAAATGGCCC
GCCGGGACTAGGCACGAGCGAATCTACATCCAGCAGGATAACGCGCGCCC
GCACTCTGTGCTCAGCGACCCGGACCTTTTGCAAGCGTGCACTTCAGGTC
GGTTCGACCTGCAGCTCATCAACCAGCCGCCAAACAGCCCGGACACAAAC
ATCCTGGACTTGGGATGTTTCGCTTCCATCCAGTCCCTGCAGGACCGCAC
TCGCGCCAGGACAATCGACCAACTCATCACCAAGGTCAGCATGGCGTTGG
AGGTGGCGGCCGCGGATAAACTCGCCAAAGTTTGGACCACAATGCAGAGC
TGCCTGGAGCAGACTTTGCTATGTGCAGGGGAGAACACGTACAAGGTGCC
CCACCTAGGGAAGGACAGAGCTGCCCGTACGGGGACGGCAATCGACCGGT
GCTTGCAGTGCTCTGAGGAGGCGTGGGCGGCAGGACACGCGGCGCTTCAG
GCGGGACAGGCGCAAGGGGGACAGGCGCAAGGGGGGTCGGCATAAGACAT
ATATTCTACCTCTACGACAACCAGGAACCCCCAGTCCGGAAGACACAGAG
CAAGCGTTTCATCACGAAAGTGATGTGTCTCGCGGCGGTGGCTCGCCCGC
GATGGGACAGCAATGCAAGCTTCCGCTTCAACGGCAAGATCGGCCTGTGG
CACTTCTTCGAGCGGTCACCTGCACAACGCGGCAGCGGCAACCGTGCAAG
AGGGGAGCTGGTGACGAGGTGTGTGGAGGTCACCAAGCAGTCGTACAAAA
ATATGCTCATCGACAACGTGATCCCTGCCATCAAGCAGAAATGGCCCGCC
GGGACTAGGCACGAGCGAATCTACATCCAGCAGGATAACGCGCGCCCGCA
CTCTGTGCTCAGCGACCCGGACCTTTTGCAAGCGTGCACTTCAGGTCGGT
TCGACCTGCAGCTCATCAACCAGCCGCCAAACAGCCCGGACACAAACATC
CTGGACTTGGGATGTTTCGCTTCCATCCAGTCCCTGCAGGACCGCACTCG
CGCCAGGACAATCGACCAACTCATCACCAAGGTCAGCATGGCGTTGGAGG
TGGCGGCCGCGGATAAACTCGCCAAAGTTTGGACCACAATGCAGAGCTGC
CTGGAGCAGACTTTGCTATGTGCAGGGGAGAACACGTACAAGGTGCCCCA
CCTAGGGAAGGACAGAGCTGCCCGTACGGGGACGGCAATCGACCGGTGCT
TGCAGTGCTCTGAGGAGGCGTGGGCGGCAGGACACGCGGCGCTTCAGGCG
GGACAGGCGCAAGGGGGACAGGCGCAAGGGGGGTCGGCATAA
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