mRNA_H-elongata_contig126267.1957.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: D7FJK0_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK0_ECTSI) HSP 1 Score: 236 bits (601), Expect = 2.240e-68 Identity = 129/247 (52.23%), Postives = 171/247 (69.23%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGFSGLKKPPAKVLFPAYSHENLVDILTERVGSTLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLD-AVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKS------------EKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFYKTAT 702
VLVG+ANS++F++ FSGLKK P ++LF +Y+ E+L ILTERVGST+ AIQ CA+K AAT GDARRA+N CREAVVLA +ELQ+KLD A S ER +LG+ G LVTI+HM+ A+A ++Y AIA LS+ A+++L +A + + K LTQG LQ+KC+ W KL+ GPSQ++F+G +D+LA GL+ LK KQ T GR R+LVL IE +D+EAAL Q F+KT T
Sbjct: 710 VLVGLANSLDFNISFSGLKKAPQRLLFQSYTPEDLASILTERVGSTVHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQELQQKLDDATSEAEREQLGEG-GGDNLVTIRHMAKAVAAGNAAKYAGAIAALSLHAKVVLTVAAAAVGAVSDRGGGAGAHGSKGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGIIDLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFKTVT 955
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A830BQ65_9LAMI (Cell division control protein 6 homolog n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BQ65_9LAMI) HSP 1 Score: 89.0 bits (219), Expect = 7.870e-17 Identity = 74/239 (30.96%), Postives = 119/239 (49.79%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGS----TLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFYK 693
+L+GIAN+++ F L PA + F AYS + ++ IL ER+ + A++LCAR++AA GD R+A++VCR A+ L E +E ++G V I H++ AL+ + S D I L QIILCS+ + K+ T T G+L +KC K V+ S +L DQG+++L QS + R++ L ++ +D+ AL F++
Sbjct: 211 ILIGIANAIDLADRFIPKLQSLNCKPAVITFRAYSKDQIIVILQERLRALPYTVFQPQAVELCARRVAAASGDIRKALSVCRSAIELLEAERREPTSDITG---------------VRIDHVAAALSKTFKSTVVDTIQSLPQHQQIILCSAVKLFRVGKKDT-TIGEL-NKCYVDVCKSTLIPPAGIVELSSMCRVLDDQGILKLG--QSRDDKLRRVSLKVDGADIAFALQGIRFFR 430
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A5C7IYM1_9ROSI (Cdc6_C domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IYM1_9ROSI) HSP 1 Score: 85.1 bits (209), Expect = 2.230e-15 Identity = 71/234 (30.34%), Postives = 114/234 (48.72%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGS----TLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSS 678
+L+GIAN+++ F + PA V F AYS + ++ IL ER+ A++LCARK+AA GD R+A+ V R+AV + EL++ ++ + V + HM+ AL+ + S D I L QIILCS+ + K+ T T G+L + K ++F +L DQGL++L QS + +++ L ++ SDV AL +
Sbjct: 267 ILIGIANAIDLADRFLPRLQSMNCKPAVVTFRAYSKDQIIRILQERLMGLPYIVFQPQALELCARKVAAASGDMRKALCVSRKAVEMLETELRDSASKINSKS-------------VRVDHMALALSNTFKSPIVDTIQSLPQHQQIILCSAVKFFRGGKKDT-TVGELNKSYTDIC-KTSMIPPVGTLEFLSMCRVLNDQGLLKLG--QSREDKLKRVTLKVDESDVGFALQA 483
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: W9RHB2_9ROSA (Cell division control protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RHB2_9ROSA) HSP 1 Score: 84.7 bits (208), Expect = 3.110e-15 Identity = 76/249 (30.52%), Postives = 123/249 (49.40%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGST----LTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEE------RMRLGDATAGVP-----LVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFY 690
VL+GIAN+++ F L PA + F AYS + ++ IL ER+ + A++LCARK+AA GD R+A+ VCR A+ + EL+E + +G ++ A V +V I HM+ AL+ + S D I L QIILCS+ + K+ T T G+L +K + K ++ S +L DQGL++L QS + +++ L ++ +D+ AL ++
Sbjct: 275 VLIGIANAIDLADRFLPKLQSLNCKPAVITFRAYSKDQILKILQERLTALPYTIFQPQALELCARKVAAASGDMRKALCVCRSAIEMLEAELRESSNNFNGSSIETAFFESQIDPHAAVVKKHEIDIVGIDHMAVALSKTFKSPVVDTIQSLPQHQQIILCSAVKLFRGGKKDT-TIGEL-NKSYVEFCKSALIPPVGILELSNMCRVLNDQGLLKLG--QSREEKFKRVTLKVDEADISFALQVYKYF 519
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A2I0A0X6_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A0X6_9ASPA) HSP 1 Score: 83.2 bits (204), Expect = 6.990e-15 Identity = 68/239 (28.45%), Postives = 111/239 (46.44%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVG----STLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFYK 693
+L+GIAN+++ F L P + FPAYS + +++IL +R+ S A+ CARK+AA GD R+ ++ CR A+ + E+++ G + +VT HM AL+ + D I L QIILC + K+ T +L ++ L ++F +L+DQGL+ L GK S R ++L L I++SD+ A F++
Sbjct: 165 ILIGIANAIDLADRFLPKLESLNCKPTVLSFPAYSRDQILEILRQRLMVLEYSVFQPLALDYCARKVAAASGDMRKVLDTCRTAIDVLEAEIRDNSTKEVGND------------IVTFDHMDIALSKAFKCAKVDIIQSLPQHQQIILCCIVKLFQHSKKNATTIAELNRSYLQICKSLHV-PAIGSIEFIDMCRVLSDQGLLEL-GK-SKEDRLKRLTLKIDISDILFAFKEIRFFQ 388
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: W9RXE1_9ROSA (Cdc6_C domain-containing protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RXE1_9ROSA) HSP 1 Score: 83.6 bits (205), Expect = 7.960e-15 Identity = 78/243 (32.10%), Postives = 123/243 (50.62%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGST----LTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEK---LDAVSGE----ERMRLGDATA----GVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAAL 672
VL+GIAN+++ F L PA + F AYS + ++ IL ER+ + A++LCARK+AA GD R+A+ VCR A+ + EL+E L+ S E E+ D + +V I HM+ AL+ + S+ D I L QIILCS+ + K+ T T G+L +K + K ++ S +L DQGL++L QS + +++ L ++ +D+ AL
Sbjct: 255 VLIGIANAIDLADRFLPRLQSLNCKPAVITFRAYSKDQILKILQERLTALPYTIFQLQALELCARKVAAASGDMRKALCVCRSAIEMLEAELRESSNNLNCSSVETTFFEKHNDPDVAVVKKQEIDIVRIDHMAVALSKTFKSQVVDTIQSLPHHQQIILCSAVKLFRGGKKDT-TIGEL-NKSYVDFCKSALIPPVGILELSSLCRVLNDQGLLKLG--QSREEKFKRVTLKVDEADISFAL 493
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A3P6D9A2_BRACM (Cell division control protein n=9 Tax=Brassica TaxID=3705 RepID=A0A3P6D9A2_BRACM) HSP 1 Score: 82.8 bits (203), Expect = 1.310e-14 Identity = 70/229 (30.57%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 10 GIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGS----TLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAAL 672
G+AN+++ F L P + FPAYS + ++ IL ER+ A++LCARK+AA GD R+A++VCR A+ + L+ + G E T P+V + HM+ AL+ + S D I L QII+CS+A + K+ T G+L + K R +F+ +L DQG+ LK Q+ + +++ L ++ SD+ AL
Sbjct: 247 GVANAIDLADRFLPKLKSLNCKPMVITFPAYSKDQILRILQERLMVLPYVAFQSNALELCARKVAAASGDMRKALSVCRSAIEI----LEIDIRGSPGPESQ---GPTPDNPVVRMDHMAAALSKTFKSPVVDTIQTLPQHQQIIICSAAKAFRGSKKDA-TIGELNKLYLEIC-KSRVISPAGITEFTNMCTVLNDQGI--LKFGQARGNKLKRVSLRVDESDITFAL 464
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A6J0JDQ2_RAPSA (Cell division control protein n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0JDQ2_RAPSA) HSP 1 Score: 81.3 bits (199), Expect = 4.410e-14 Identity = 68/239 (28.45%), Postives = 119/239 (49.79%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGS----TLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFYK 693
+L+G+AN+++ F L P V FPAYS + ++ IL ER+ A++LCARK++A GD R+A++VCR A+ + E++ +D E + + + +V + HM ALA + S D I L QII+CS+A + K+ T +L + K +F+ +L DQG+V+L Q+ + + +++ L ++ +D+ AL F++
Sbjct: 256 ILIGVANAIDLADRFLPKLKSLNCKPLVVTFPAYSMQQILRILQERLVELPYVAFQPKALELCARKVSAASGDMRKALSVCRSALEILETEVKGSIDH---EPQTPVTEDQ----VVKMDHMLAALAKTFKSPVVDTIQSLPQHQQIIVCSAAKAFRGSKKDR-TIAELNKLYLEIC-KSSMITPAGITEFTNMCTVLNDQGIVKLS--QARNDKLKRVSLRVDEADITFALKEIRFFR 483
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A2G5BJJ8_COERN (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BJJ8_COERN) HSP 1 Score: 80.9 bits (198), Expect = 4.440e-14 Identity = 68/231 (29.44%), Postives = 110/231 (47.62%), Query Frame = 1
Query: 4 LVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGST---------LTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEKLDAVSGEERMRLGDATAGVPLVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCS--------SAGEIKSEKRAT---LTQGDLQDKCARVWGKLRNGEGPSQVDFSGTVDMLADQGLVRLKG-KQSTHGR 621
LVGIAN+++ F P + F Y ++V IL R+ S + K A++LCARK+AAT GD R+A++VCR+A+ A E + K G++ + TA P VTI H++ L S + L+ Q +++LC+ ++ + S+K A +T DL + V +LR ++ +F V M+ QG+V ++ K GR
Sbjct: 155 LVGIANALDLTDRFLPRLQARNCEPLLLNFNPYQVNDIVVILQSRLDSVASSMATEPLIQKAALELCARKVAATSGDLRKALDVCRQAMEAAEAEHKRKSMTRVGDKENGVASVTAASPKVTIMHIAKVLTNLNGSSTTQKLNSLNFQQKLVLCAYVFLTSAAASTDTPSKKSAASNGITLSDLFAEYCAVCNQLRMLAPVTRSEFFDLVAMMETQGVVSVQSLKAGRRGR 385
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Match: A0A1S3VIF8_VIGRR (Cell division control protein n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3VIF8_VIGRR) HSP 1 Score: 80.1 bits (196), Expect = 1.070e-13 Identity = 74/252 (29.37%), Postives = 122/252 (48.41%), Query Frame = 1
Query: 1 VLVGIANSMEFDVGF----SGLKKPPAKVLFPAYSHENLVDILTERVGS----TLTKGAIQLCARKLAATHGDARRAINVCREAVVLATRELQEK-------LDAVSGEERMRLGDATAGVP-----LVTIQHMSTALAGSQVSRYKDAIADLSVQAQIILCSSAGEIKSEKRATLTQGDLQDKCARVWGKLRNGEGPSQ--VDFSGTVDMLADQGLVRLKGKQSTHGRARQLVLPIEMSDVEAALSSQPFY 690
+L+G+AN+++ F + L P V F AYS + ++ IL ER+ + A++LCARK+AA+ GD R A+++C A+ + E++E L+ +S ++ L A + +V HM+ AL+ + S D I L QIILCSS + K+ T G+L G R+ P ++FS +L+DQGL++L QS + R++ + D+ AL F+
Sbjct: 224 ILIGVANAIDLADRFLPRLTSLNCKPVVVNFQAYSKDQILMILEERLKELPYIVFQQQALELCARKVAASSGDMRNALSICWSAIEMLEAEIRESACNLNTSLEEISFSQQ-NLPTAPDCMKKREFDIVRTDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMNHFREAKKDTFL-GELYKSYV---GICRSSLIPPAGILEFSNMCRVLSDQGLIKLG--QSREDKLRRVSPKVNEGDITFALQGIRFF 468 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126267.1957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig126267.1957.1 >prot_H-elongata_contig126267.1957.1 ID=prot_H-elongata_contig126267.1957.1|Name=mRNA_H-elongata_contig126267.1957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp MEFDVGFSGLKKPPAKVLFPAYSHENLVDILTERVGSTLTKGAIQLCARKback to top mRNA from alignment at H-elongata_contig126267:485..1237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig126267.1957.1 ID=mRNA_H-elongata_contig126267.1957.1|Name=mRNA_H-elongata_contig126267.1957.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=753bp|location=Sequence derived from alignment at H-elongata_contig126267:485..1237+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig126267:485..1237+ >mRNA_H-elongata_contig126267.1957.1 ID=mRNA_H-elongata_contig126267.1957.1|Name=mRNA_H-elongata_contig126267.1957.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig126267:485..1237+ (Himanthalia elongata Himel1 dioecious)back to top |