mRNA_H-elongata_contig12608.1940.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: D7G5T1_ECTSI (Oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T1_ECTSI) HSP 1 Score: 702 bits (1812), Expect = 9.750e-240 Identity = 402/722 (55.68%), Postives = 469/722 (64.96%), Query Frame = 1
Query: 1 LPSAMEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGKRKMCFRLLLLVLNSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREAFQGIKRLASSLYFSAHPEV-------VSMECLTATAAATMKTNPNWEDIRYDPQHHSIARDGL------------LGEAAVVPEFGQRSDAKDKCIQTAKAATGIISPSFR-----------EPDSPTDFSPTCVSATGPSA----------------SRVSSLAEGVDGGHAEGVVVGSGSVGPRGSEGQTPVASTEAPPSKLVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAP-ASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAK----------VSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYVQDLMGLDGGYGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
LP +EAYTR + RRCL M GR SD+GVA LLA A+E NIS E+RSG R+L VL++RLGA + TGRAVP SQ LA+RH +LK+WS SR+ LR+AFQG+KRL SL+FSAHPEV + A A +KTNPNW DIRYDPQHH ARD + AAV P + KD+ QTA+AA + S + R P SP P SAT +A SR S + G A + SG+ GS P + E P +L VDVVV+GSGAGGGCAAG LA++GL+VAVLEKGGLY +DFA FSEMEAY+ +YE QGVL + ++V+LAGSCVGGGTTVN AASFRTP RHVRLEW +K+ LKSFEPGGPFD ALD VC RL VN SHRAPG P P ASL+VNQHQ+SLWNGA ASGR P+AVP N KDCVDCGSC+HGCA+G+K+STHVTWLQDGLDSGNIIL+P+AK +L+D G+ATGV A V+ H G L V+ RAVVVSGGAI+TPA+LLRSGLKHP IGRHL LHPVL GGVFPEDY +G +D S S A AA T G + K+ V SGE + G PR+P G GVMMG YVQDLM LDGGYGCVIEAPPSHPGL GLV+PWND L+HR
Sbjct: 99 LPVKVEAYTRTLVRRCLAMYGRSGSDVGVAVLLAQAFEINISEEERSG-----LRVLFRVLSTRLGAFVLTGRAVPFQSQSLAARHGVLKRWSVSRIRPLRDAFQGVKRLTCSLFFSAHPEVHHKPSHPEGSGAESTAALAKIKTNPNWIDIRYDPQHHRFARDETPAVSSAGQRPDPIAAAAVRPGLWSGAKVKDRVSQTARAAAAVASTAPRPSTSLSANSHSNPPSPASSLPPSFSATAAAAPPSRVPAPEDVPPKFFSRPRSKSSGSAAATAGAFLPSSGTTS--GSASAAPTSPHETLPQQLTVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAHDFARFSEMEAYKDMYEGQGVLATEGGAVVILAGSCVGGGTTVNWAASFRTP-RHVRLEWSRKLGLKSFEPGGPFDDALDAVCSRLGVNIGNSHRAPGFPVPNASLRVNQHQSSLWNGAAASGRVPRAVPTNTKDCVDCGSCLHGCAYGSKQSTHVTWLQDGLDSGNIILVPHAKVERVLMDAGRATGVEAVVSPH----GGGMAASLTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLAVGGVFPEDY--DGEHGAGEDDPKRSTGGSMAAAAGTAGKQAKSXXXXXXXXXXXXXVGSGEGTN--------GSCPRVPGVGRGVMMGVYVQDLMRLDGGYGCVIEAPPSHPGLMGLVMPWNDALTHR 798
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A6H5JQQ5_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ5_9PHAE) HSP 1 Score: 551 bits (1420), Expect = 3.170e-184 Identity = 329/636 (51.73%), Postives = 390/636 (61.32%), Query Frame = 1
Query: 1 LPSAMEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGKRKMCFRLLLLVLNSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREAFQGIKRLASSLYFSAHPEV-------VSMECLTATAAATMKTNPNWEDIRYDPQHHSIARDGL------------LGEAAVVPEFGQRSDAKDKCIQTAKAATGIISPSFR-----------EPDSPTDFSPTCVSATGPSA----------------SRVSSLAEGVDGGHAEGVVVGSGSVGPRGSEGQTPVASTEAPPSKLVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAP-ASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGK 1767
LP +EAYTR + RRCL M GR SD+GVA LLA A+E NIS E+R G R+L +L++RLGA I TGRAVP SQ LA+RH +LK+WS SR+ LR+AFQG+KRL SL+FSAHPEV A A +KTNPNW DIRYDPQHH AR+ + +G AA P + K++ TA+AA P SP P AT +A +R S + G A + SG+ R S P+ E P +L VDVVV+GSGAGGGCAAG LA++GL+VAVLEKGGLY DFA FSEMEAY+ +YE QGVL + ++V+LAGSCVGGGTTVN AASFRTP RHVRLEW +K+ LKSFEPGGP D ALD VC RL VN SHRAPG P P ASL+VNQHQ+SLWNGA ASGR P+AVP N K+CVDCGSC+HGCA+G+K+STHV +L+D G+ATGV A VT H G K PL V+ RAVVVSGGAI+TPA+LLRSGLKHP IGRHL LHPVL GGVFPEDY +G +D S S A AA T G + +
Sbjct: 191 LPVKVEAYTRTLVRRCLAMHGRSGSDVGVAILLAQAFEINISEEERLG-----LRVLFRMLSTRLGAFILTGRAVPFHSQSLAARHGVLKRWSVSRIRPLRDAFQGVKRLTCSLFFSAHPEVHRKPSHPEESGAEWTAALAKIKTNPNWIDIRYDPQHHRFARNEIPVLSSTGQRLNPIGAAAARPGLWSGAKVKERVSLTARAAXXXXXXXXXXXXXXXXXXXXNPPSPASSLPPSFPATAAAAPPSRVPAPEDVLPKFFTRPRSKSSGSAAATAGAFLPSSGTTSGRASA--VPIPPHEPLPQQLTVDVVVVGSGAGGGCAAGALAARGLRVAVLEKGGLYGAPDFAGFSEMEAYKDMYEGQGVLATEGGAVVILAGSCVGGGTTVNWAASFRTP-RHVRLEWSRKLGLKSFEPGGPLDNALDAVCSRLGVNIGNSHRAPGFPVPNASLRVNQHQSSLWNGAAASGRVPRAVPTNTKECVDCGSCLHGCAYGSKQSTHV--------------------ERVLMDAGRATGVEAVVTPH----GGGKAAPLTVRARAVVVSGGAINTPAILLRSGLKHPMIGRHLCLHPVLAVGGVFPEDY--DGGHGAGEDDPKRSTGGSMAVAAGTAGKQAR 792
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: W7T4J7_9STRA (Long-chain-alcohol oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4J7_9STRA) HSP 1 Score: 281 bits (718), Expect = 6.140e-80 Identity = 224/672 (33.33%), Postives = 292/672 (43.45%), Query Frame = 1
Query: 64 RPASDIGVAGLLADAYEANISPEQRSGKRKMCFRLLLLVLNSRLGALIFTGRA-----VPISSQDLASRHTLLKQWSTSRVSKLREAFQGIKRLASSLYFSAHPEVVSMECLTATAAATMKTNPNWEDIRYDPQHHSIARDGLLGEAAVVPEFGQRSDAKDKCIQTAKAATGIISPSFREPDSPTDFSPTCVSATGPSASRVSSLAEGVDGGHAEGVVVGSGSVGPRGSEGQTPVASTEAPPSKLVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLI-DGGKATGVTATV-------------------TTHDCGYGDDKVTPLEVQGR-AVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYVQDLMG--LDGGYGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
R A D V + D E ++ P+ R R++L L LG TG SS R + + TS + +R IK +A +YF+A S T T TNP+W + Y + R + G+ P+ + P R+ P+CV G T V +L DVV++GSGAGGG AAGVL + GLKV VLEKGG Y + DFA F E+++ R L ER G + + + S+ +LAGSCVGGGTT+N ASFRTP HVR EWV K L F G +D+ALD V +RL +NT +SHR P + SL VNQ+ LW GA A G VPRN + C DC C GC +G K+ST T+L+D ++GN L+ A +L D A GV ATV + H G L V AV++S G++H+PAVLLRSGLKH KIGRHL LHPV G+FP + DT +L GV MGTYV D MG + G+G IE PPSH GL G++ P+ ++R
Sbjct: 114 RGALDADVPARVGDIVEEDLRPDARK-----IVRMVLYALEMPLGLFFLTGGTWYGWGTGFSSMPFRQREAVFGRLLTSIIEPIRGLAILIKAMAGRIYFAARDTPPS------TPGGT-PTNPSWTALGYQDRTRDRVRSVMGGKPLRKPQ---------------------LHPLRRD-----SIPPSCVG-------------------------------------GGTDV-------RELSCDVVIVGSGAGGGTAAGVLTAAGLKVVVLEKGGYYSEEDFAGFGELDSERALCERSGWMGAQELSVSILAGSCVGGGTTLNWCASFRTPE-HVRREWVDKHGLTCFG-GAEYDQALDAVARRLNLNTRHSHRNPEVASVPSLVVNQNNERLWQGAKAVGARCLPVPRNVRGCEDCSGCERGCPYGAKQSTLRTFLEDAENTGNFKLVARAHVDKVLRNDDNDAVGVIATVHEERRLAEGRESDGEGRPPSGHRPGPSTSSRYQLIVWAHHAVILSAGSLHSPAVLLRSGLKHHKIGRHLALHPVSGVAGLFPSET---------SDT------------------------------------HL--------------GVGMGTYVSDFMGGEMKDGWGGAIETPPSHAGLAGVIAPYGTAFNYR 642
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A7S0SPC3_9STRA (Long-chain-alcohol oxidase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPC3_9STRA) HSP 1 Score: 268 bits (685), Expect = 2.330e-76 Identity = 161/411 (39.17%), Postives = 222/411 (54.01%), Query Frame = 1
Query: 787 VDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGL-DSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQG-----RAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYVQ--DLMGLDGGYGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
VDVVV+GSG+GGG + LA GL V +LEKG YD DF+ + E EA+ + +ER G+L S D S+ +LA S VGGG+T+N +ASF+TP+ HV +W + + L F+ GG F+K+L VC RL VN S+ + VN + LW GAV G +P+ +PRN K+CVDCG C +GC + K+ST + L N+ +I N + + ++I+GG ATG+ V T+ G + +PL V+ + VV S G++HTPA+LLRSGL HP IGRHL LHPV+ GGVFP+ G+S +GV MG V+ D + GYG VI+ PP HPG+ L +PWNDGLS++
Sbjct: 185 VDVVVVGSGSGGGIVSSKLAEHGLSVLLLEKGSYYDAKDFSQWRESEAFSKAFERGGLLTSEDGSIAVLAASTVGGGSTINWSASFKTPA-HVLKDW-ELLGLSIFKTGGEFEKSLSNVCNRLGVNDRCSYHHKHEVDNHNYVVNNNNRLLWEGAVKLGYSPEKIPRNVKNCVDCGHCCYGCPYLAKQSTLTNSIAPLLLKKDNLRVISNCRVNKVIIEGGIATGIQGQVFTYPTTEGPIRPSPLSVRNIIVKAKIVVSSCGSLHTPALLLRSGLTHPLIGRHLALHPVVGVGGVFPD----------------------------------------------------LSTGLS-------TGVSMGVVVKSTDFDSKEKGYGIVIQTPPVHPGVLALAMPWNDGLSYK 534
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A7R9YDU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDU7_9STRA) HSP 1 Score: 261 bits (668), Expect = 8.350e-75 Identity = 208/650 (32.00%), Postives = 291/650 (44.77%), Query Frame = 1
Query: 64 RPASDIGVAGLLADAYEANISPEQRSGKRKMCFRLLLLVLNSRLGALIFTGRAVPISSQDLASRHTLLKQWSTSRVSKLREAFQGIKRLASSLYFSA-HPEVVSMECLTATAAATMKTNPNWEDIRYDPQHHSIARDGLLGEAAVVPEFGQRSDAKDKCIQTAKAATGIISPSFREPDSPTDFSPTCVSATGPSASRVSSLAEGVDGGHAEGVVVGSGSVGPRGSEGQTPVASTEAPPSKLVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAP---GCPAPASLK--VNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDG-GKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYVQD-LMGLDG-GYGCVIEAPPSHPGLTGLVLPWNDGL 1986
R ASD+ VA A A + + P R + R++L +L++RLG +F + A+RH +L++W+ S + LR+ FQ +KRL SL+ A P+ + NPNW+ + Y P+ + G AA+ DA C+ REP PP+ DVV++GSGAGGG AA VL KG +VAV+EKG + + +FA +SEM+A+ +E G+L + D S+ ++AGSCVGGGTT+N +ASFR P HVR EW++ + D + V K + +NT +HR GC SL VN++ L GA + G +AVPRN K CVDCGSC GCA+G K+ T + L+D +G + LIPN + D G+ATGV V D G + L + AV+++ G+I+TP +L RSGL+H +GR+L LHPV GVF EG ++ +DTG GV MGTYV D + DG GYG V E PP HP L + +PW L
Sbjct: 50 RSASDVDVARHFAIATQRHGKPADR-----VALRVVLRLLDTRLGGWLFGAGFIRFKDATFAARHRMLERWAASPLPVLRQLFQSLKRLGCSLFLGAPFPDDGGVR------------NPNWDILDYTPRCEAA---GTQRRAALAE---MEDDALKACVP-------------REP--------------------------------------------------------LRVPPAPKPYDVVIVGSGAGGGVAASVLTQKGFRVAVVEKGQHFGETNFAQWSEMQAFENAFEDGGLLTNGDKSISVMAGSCVGGGTTINWSASFRLPP-HVRREWIRNFGIDWLAED--LDASFAEVSKMMNINTAETHRHEKLHGCTDSPSLDHAVNKNNDFLVEGAYSLGMKCRAVPRNVKGCVDCGSCNFGCAYGAKQGT-LKILRDAARTGLLTLIPNTTVDAVQRDRTGRATGVKC-VREADGGARES----LFLSAHAVIIAAGSINTPKILARSGLRHSSLGRNLSLHPVACVVGVF------EGGASEAEDTG------------------------------------------------LDHGVSMGTYVCDGNVDFDGTGYGVVPETPPVHPLLLAIGMPWKSAL 544
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: K8YNZ6_NANGC (Glucose-methanol-choline oxidoreductase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNZ6_NANGC) HSP 1 Score: 227 bits (579), Expect = 2.080e-65 Identity = 132/287 (45.99%), Postives = 166/287 (57.84%), Query Frame = 1
Query: 868 VLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLI-DGGKATGVTATV-------------------TTHDCGYGDDKVTPLEVQG-RAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPED 1665
VLEKGG Y + DFA F E+++ R L ER G + + + S+ +LAGSCVGGGTT+N ASFRTP HVR EWV K L F G +D+ALD V +RL +NT +SHR P + SL VNQ+ LW GA A G VPRN + C DC C GC +G K+ST T+L+D ++GN L+ A +L D A GV ATV + H G L V AV++S G++H+PAVLLRSGLKH KIGRHL LHPV G+FP +
Sbjct: 1 VLEKGGYYSEEDFAGFGELDSERALCERSGWMGAQELSVSILAGSCVGGGTTLNWCASFRTPE-HVRREWVDKHGLTCFG-GAEYDQALDAVARRLNLNTRHSHRNPEVASVPSLVVNQNNERLWQGAKAVGARCLPVPRNVRGCQDCSGCERGCPYGAKQSTLRTFLEDAENTGNFKLVARAHVDKVLRNDDNDAVGVIATVHEERRLAEGRESDGEGRPPSGHRPGPSTSSRYQLIVWADHAVILSAGSLHSPAVLLRSGLKHHKIGRHLALHPVSGVAGLFPSE 285
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A7S1UJN9_9STRA (Long-chain-alcohol oxidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJN9_9STRA) HSP 1 Score: 239 bits (611), Expect = 4.630e-65 Identity = 160/408 (39.22%), Postives = 210/408 (51.47%), Query Frame = 1
Query: 790 DVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHR---APGCPAPASLK---VNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDG-GKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYV-QDLMGLDG-GYGCVIEAPPSHPGLTGLVLPWNDGL 1986
DV+V+GS AA VLA++GL+VAVLEKGG + + DFAA++E +AY YE +L + D+S+ +LAG+CVGGGTT+N ASFR P HV EW + L G + +LD VC +L V T ++HR C A + VN L GA A G +AVPRN K CVDCGSC HGC +G K+ T V L++ ++G + L P ++ + G ATGV A D G GD PL ++ RAV+VS G+++TP VL RSGL+HP IGRHL LHPV G F + R+ P +T GV MGT V ++ + DG GYG V E PP HP + GL +PW L
Sbjct: 291 DVIVVGSXXXXXTAASVLAARGLRVAVLEKGGHFTEEDFAAWTEAQAYEHAYENAALLANKDASITVLAGACVGGGTTINWCASFRPPP-HVLKEWARDFGLGDGLAG--LEASLDAVCAKLGVGTRFTHRHEHLSDCAAAQQSQAHVVNAANDFLVEGAHALGMPCRAVPRNVKGCVDCGSCSHGCVYGAKQGTLVL-LREAAETGRLALYPRTTVDYVTRNAAGAATGVHAL--REDDGGGD--AVPLRLRARAVIVSAGSVNTPKVLGRSGLRHPVIGRHLTLHPVTCVTGSFDRE-----RNGKPTNT------------------------------------------------AMDRGVSMGTCVREENIDFDGQGYGVVPETPPVHPFILGLGVPWKTAL 637
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A3M1N6W4_9CHLR (Long-chain-alcohol oxidase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3M1N6W4_9CHLR) HSP 1 Score: 229 bits (583), Expect = 2.610e-62 Identity = 158/407 (38.82%), Postives = 199/407 (48.89%), Query Frame = 1
Query: 781 LVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFG-SGVMMGTYVQDLMGLDG-GYGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
L DVV++GSGAGGG A L++ GL V VLEKGG Y + DF + E+ + R++E+ G +VS D +++LAGS +GGGTTVN AA+ RTP V EW Q + + G F++ALD V RL V + S AP N L GA A G T K +PRN K C DCG+C GCA G K+ T T+L+D N L A +LI+ G A GV TV + L V+ RAV V GGA+HTPA+LLRSGL + IGR+L LHP A G + E P+ G SGVMM YV LDG GYG +E+ P HPGL + LPW DGL H+
Sbjct: 170 LETDVVIVGSGAGGGVLAAELSAAGLDVIVLEKGGYYAEPDFDGY-EVRSQERMFEKGGFMVSEDLGMMILAGSTLGGGTTVNWAAALRTPEA-VLAEWAQHYGVDFTD--GTFERALDAVSARLHVTEEES-------AP-----NARNAVLVRGAQALGYTVKVIPRNVKGCADCGACGFGCAHGAKQGTLKTYLRDACRY-NTRLAVGAHVDRVLIEDGAACGVQGTVQSVS-----GAPVRLTVRARAVAVCGGALHTPALLLRSGLTNAHIGRNLHLHPSTGAFGFYAE-------------------------------------------------------------PINGWSGVMMSHYVPQFNNLDGRGYGVTLESAPGHPGLAAVALPWQDGLQHK 493
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: A0A7C4LBQ9_9CHLR (Long-chain-alcohol oxidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4LBQ9_9CHLR) HSP 1 Score: 223 bits (569), Expect = 2.410e-60 Identity = 163/427 (38.17%), Postives = 206/427 (48.24%), Query Frame = 1
Query: 727 RGSEGQTPVASTEAPPSKLVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCV---DCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFGSGVMMGTYVQDLMGLDGG-YGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
RG + P+ A + L DVVV+GSGAGGG AA LA G V VLEKGG Y + DF A E AY+RLYE Q VL + D +V+LAGS +GGGT VN ASFRTP HVR W ++ G F +LD VC RL VNT+ S A A ++ L A G +P N + C CG C GCA G K+ST T+L+D +G I++ A+A +LI+ G+A GV A T C L V+ RAVV + GA+HTPA+LLRSGL++P +GRHL LHP G++P+ L +P P M+ YV LDG YG V+E PP+HPGL GL L W G H+
Sbjct: 151 RGGGSRLPILPVTAD-ATLACDVVVVGSGAGGGVAAAELARAGCDVIVLEKGGYYAEEDFDAV-EFNAYQRLYENQAVLATRDLGVVVLAGSALGGGTVVNWGASFRTPD-HVREAWEREHACAGLA-GPEFTASLDAVCARLGVNTEESW------ASAEARL------LERACDALGLGCGVIPVNLRGCAAPETCGWCTFGCARGAKQSTARTYLRDAAQAGARIVV-GAEARRVLIEAGRAVGVEAVAGT--C--------TLTVRARAVVSAAGALHTPALLLRSGLQNPNLGRHLRLHPTAAVLGLYPD---------------------------------------------------LVEPWRGP---------MLTRYVNQWADLDGRHYGVVVEHPPAHPGLIGLALDWRSGAQHK 490
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Match: UPI001ACA6ED4 (Putative GMC-type oxidoreductase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001ACA6ED4) HSP 1 Score: 223 bits (568), Expect = 3.100e-60 Identity = 149/407 (36.61%), Postives = 195/407 (47.91%), Query Frame = 1
Query: 781 LVVDVVVIGSGAGGGCAAGVLASKGLKVAVLEKGGLYDQNDFAAFSEMEAYRRLYERQGVLVSTDSSLVLLAGSCVGGGTTVNCAASFRTPSRHVRLEWVQKMNLKSFEPGGPFDKALDVVCKRLEVNTDYSHRAPGCPAPASLKVNQHQTSLWNGAVASGRTPKAVPRNAKDCVDCGSCVHGCAFGNKRSTHVTWLQDGLDSGNIILIPNAKASHLLIDGGKATGVTATVTTHDCGYGDDKVTPLEVQGRAVVVSGGAIHTPAVLLRSGLKHPKIGRHLGLHPVLLAGGVFPEDYRIEGRSATPQDTGGASDAASPAEAAATIGIEGKTEAKVSSGERSKAAGNLKQPGISPRIPVFG-SGVMMGTYVQDLMGLDG-GYGCVIEAPPSHPGLTGLVLPWNDGLSHR 1995
L+ DVV++GSGAGGG AG L++ GL V V+EKGG Y + DF SE+ A +RL ER G LV+ D S+++LAG +GGGT +N AS RTP+ V EW + + F G + ++D V RL V A + N+ L GA A G K +PRN C DCG C GC G K+S T+LQD G LI +A+ +LI+ G+A GV A T ++ V+ + V+ + GAIHTPA+LLRSGL + IGR+L LHP G F E P+ G GVMM YV + LDG GYG +E+ P HPGLT + PW DGL H+
Sbjct: 164 LLADVVIVGSGAGGGVLAGELSAAGLDVVVIEKGGYYAEGDFNG-SELHAQQRLLERGGFLVTDDLSMLILAGKALGGGTVINWTASLRTPNI-VLDEWEAEYGVTGFT-GREYQASMDAVSSRLHVTE------------AESEANRRNQVLVRGAAALGYAAKTIPRNVLGCKDCGFCCFGCPHGAKQSATRTYLQDAYTHG-ARLITHAEVDRVLIENGRAVGVEARART-----AQGQMVNFRVRSKTVIAAAGAIHTPALLLRSGLSNTHIGRNLHLHPSSGTFGFFEE-------------------------------------------------------------PINGWEGVMMSHYVSEFNNLDGRGYGVTLESAPGHPGLTAISFPWMDGLQHK 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12608.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12608.1940.1 >prot_H-elongata_contig12608.1940.1 ID=prot_H-elongata_contig12608.1940.1|Name=mRNA_H-elongata_contig12608.1940.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=662bp MEAYTRAVARRCLKMQGRPASDIGVAGLLADAYEANISPEQRSGKRKMCFback to top mRNA from alignment at H-elongata_contig12608:1112..8273+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12608.1940.1 ID=mRNA_H-elongata_contig12608.1940.1|Name=mRNA_H-elongata_contig12608.1940.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7162bp|location=Sequence derived from alignment at H-elongata_contig12608:1112..8273+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12608:1112..8273+ >mRNA_H-elongata_contig12608.1940.1 ID=mRNA_H-elongata_contig12608.1940.1|Name=mRNA_H-elongata_contig12608.1940.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3972bp|location=Sequence derived from alignment at H-elongata_contig12608:1112..8273+ (Himanthalia elongata Himel1 dioecious)back to top |