mRNA_H-elongata_contig12602.1938.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12602.1938.1
Unique NamemRNA_H-elongata_contig12602.1938.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A6H5KHT1_9PHAE (Squalene monooxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT1_9PHAE)

HSP 1 Score: 909 bits (2348), Expect = 0.000e+0
Identity = 471/643 (73.25%), Postives = 524/643 (81.49%), Query Frame = 1
Query:    1 RLYVVNYIAVVVFAVSMYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTG-----AMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDAD----------IKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAK-EGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWENN 1881
            RLYVVNY+AV VFA SMYRIVR+W+G+LN ++ FPLA+P  G  AS+TYLFGFFG+S+IS VMDPPF  SPAPS K  SA    G     + +  GSS YSL++PEV+IVGAGTAGASAA T  RQGRKVLLVE+CM EQDRIVGELLQPGGLRALERLGLD CAKEG DSV+V+GYAII++A       E +    D V+LYYP  DP+N++E FGKGV P  A  A            +   VPRGRSFHN RFVQR+RE A AEPNVRVVE TVS LL+G GGEVVGVRYREA K EG+E    + RVTREV APLT+VADGIWSGLRKCAN NRPQ LSTFVGVLV H  +AAPVPHK+CGHVVLAHPSP LIYQISSTETRVLVDVAG+MPSAA+GGL   LRE+SAPQLP  F+PAFLEAVARGDVKSMPNRA+ +S+VHR G LL+GDALNMRHPLTGGGMTVA+KDVELL +LL GV   D AA+A  ++RFH  R AHA+TINILANALY VFSTPE P+SK TRVDLQ ACFDYLSLGGCYSAGPVGLLSGLSP PW LTTHFFMVAFHGCR HLLP+PTP G LRVYRLLHVATKIIMPLLEQEGSTFL+WWP +KA+QL+LPWEHERWEN 
Sbjct:  147 RLYVVNYVAVAVFAASMYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISVISGVMDPPFVSSPAPSSKDRSAAPAAGLPKRFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAEAEG-RLDSVMLYYPESDPENRSELFGKGVKPAAAAAAAKGGEAGRRPCSREGGVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAVKGEGQE----EERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPLRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEGPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPAPWALTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEQEGSTFLAWWPFRKAIQLVLPWEHERWENQ 784          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: D7G804_ECTSI (Squalene monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G804_ECTSI)

HSP 1 Score: 896 bits (2315), Expect = 0.000e+0
Identity = 463/625 (74.08%), Postives = 514/625 (82.24%), Query Frame = 1
Query:   49 MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTG-----AMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDAD---------IKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAK-EGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWEN 1878
            MYRIVR+W+G+LN ++ FPLA+P  G  AS+TYLFGFFG+SIIS VMDPPF  SPAPSPK  SA    G     + +  G S Y L+ PEV+IVGAGTAGASAA T  RQGRKVLLVE+CM EQDRIVGELLQPGGLRALERLGLD CAKEG DSV+V+GYAII++A A           RD V+LYYP  DP+N++E FGKGV P  A  A           +  +VPRGRSFHN RFVQR+RE A AEPNVRVVE TVS LL+G GGEVVGVRYREAAK EG+E    + RVTREV APLT+VADGIWSGLRKCAN NRPQ LSTFVGVLV H  +AAPVPHK+CGHVVLAHPSP LIYQISSTETRVLVDVAG+MPSAA+GGL   LRE+SAPQLP  F+PAFLEAVARGDVKSMPNRA+ +S+VHR G LL+GDALNMRHPLTGGGMTVA+KDVELL +LL GV F D AA+A  ++RFH  R AHA+TINILANALY VFSTPEDP+SK TRVDLQ ACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCR HLLP+PTP G LRVYRLLHVATKIIMPLLE+EGSTFL+WWP +KA+QL+LPWEHERWEN
Sbjct:    1 MYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGPAKHFSPTEEGPSDYGLDKPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAEAG-GAAAAPGGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAKGGEAGRRPCSREGEVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKGEGQE---EEERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN 621          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A836CDI9_9STRA (Squalene monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDI9_9STRA)

HSP 1 Score: 621 bits (1602), Expect = 3.930e-209
Identity = 359/634 (56.62%), Postives = 432/634 (68.14%), Query Frame = 1
Query:   49 MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVM------DPPFAQSPAPSPK---------AASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAKEGEEGAG-AQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARG-DVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTP----EDPSSKDT--RVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMP--TPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWE 1875
            MY  ++ W G LN +N F LALP  G  AS+TY FGFFG+S +++V+      +P    S  P+           AA A+ P    + + S+ Y+LE PEVV++GAGTAGAS A+    QGR+V L+EK    QDRIVGEL+QPGG+RALE LGL  CA E  DSV V+GY +I      +     D  E    +L+YP  DP +  + FG GVT + A  A       PRGRSFHN  FV R+REVA AEPNVR+VE TV+ L++ +GG VVGVRY+   + G EG G   AR   E+ APLT+VADGIWSGLR CAN ++P  +S+FVGV+VTH P A+PVPH++CGHVVLA PSP LIYQIS TETRVLVDVAG MPSAA G L  FL E+ A  LP  F+ A+LEAVA G  +KSMPNRAL+SS   + G +LIGDALNMRHPLTGGGMTVA+KDV LL  LL G    D AA+A  S+ FHR+R  HA+TIN+LANALY VF+TP    +D +  D   R  LQ ACFDYLSLGG Y+AGP+GLLSGL+P P VL  HFFMVA HGCR HLLP+    P  +  VYRLL VA  IIMPLLE E ST LSW PV+KA+QLL PWEH RW+
Sbjct:    1 MYSFLKEWEGALNRMNVFKLALPGLGVFASMTYFFGFFGISFVNSVLGTDNQAEPCELDSDKPNNSSGSNVDEATAAVASGPYARSAPASSAKYTLEQPEVVVIGAGTAGASLAIAFAWQGRRVTLIEKSFVLQDRIVGELMQPGGMRALETLGLAACATERCDSVRVDGYTVILPPG--VSAARPDGAE---AVLHYPDSDPDSLLQQFGAGVTLEQAAAAGGA--GAPRGRSFHNCNFVARLREVARAEPNVRMVEGTVTQLVE-EGGAVVGVRYK--VRSGGEGGGYVCARPVHELRAPLTIVADGIWSGLRACANPHKPLLISSFVGVIVTHPPMASPVPHRHCGHVVLAQPSPILIYQISPTETRVLVDVAGKMPSAATGALSAFLVEQ-ARWLPPVFRAAYLEAVAAGGSIKSMPNRALASSAKLKPGAILIGDALNMRHPLTGGGMTVALKDVALLATLLGGADLADRAAVARASAAFHRRRRGHAATINVLANALYAVFTTPVCSDDDGNGGDVTARSHLQDACFDYLSLGGAYAAGPIGLLSGLTPRPGVLAAHFFMVAAHGCRAHLLPLGFLNPRRWRHVYRLLSVACGIIMPLLEVERSTPLSWLPVRKAVQLLFPWEHLRWD 623          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A4D9D9N2_9STRA (Squalene monooxygenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9N2_9STRA)

HSP 1 Score: 486 bits (1251), Expect = 6.330e-156
Identity = 285/595 (47.90%), Postives = 358/595 (60.17%), Query Frame = 1
Query:  304 VVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFG------------------------------------KGVTPKGAVDADIKRDDVP-----------------------------RGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKG----GEVVGVRY------REAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNN-RPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLE-GVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
            ++I+GAGTAGA+AAV L  +G KVLL E+ M  QDRIVGELLQPGG+RALERLGLDECAKEGIDSV V+GY +        + ++   ++   +LL YP+ DP    E FG                                    + VTP       +     P                             +GRSFHN RFVQR+R  ALAEPNV VV   VS LL  +       V+GV Y      R    +GEE    + +  R  +APLTLVADG+WS LR   +   +P  LS+FVG++++H P A+P+PH +CGHVVLA PSP L+YQISSTETRVLVD+ G MPSA+ G L  +L     PQLP   Q  F  AVARG+ KSMPNR++ ++NV R G L++GDALNMRHPLTGGGMTVA++DVE LC LLE      D AAM  +  RF R+R A A+TIN+LANAL+ VFSTP   +   TR DL+ ACFDYLS+GG  + GP+ LLSGL+P P +L  HFF+VAFHG R +L P+P+  G  R Y +L VA +IIMPLL  E ST L+ WPV+  + L+ P+
Sbjct:   94 IIIIGAGTAGAAAAVGLAERGFKVLLFERDMSLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVHVDGYVVFTPP----QHKKEGGEKVQSILLKYPAYDPATLKELFGVIDPSPSSPAADRPTLSLSPPRFSEKEGGKLVHGAGRAVTPPFPEGTKVTHAPNPPSSPSGHLSMPPSPSFPSAAHQGPTSLHPQGRSFHNGRFVQRLRARALAEPNVTVVNGIVSRLLYAEPDSPTSRVIGVEYKIGTGRRLRTADGEE---VEEKEVRRAMAPLTLVADGLWSSLRTHVDKAAKPTQLSSFVGLILSHPPMASPLPHPHCGHVVLADPSPVLLYQISSTETRVLVDIFGRMPSASTGDLAHYLSTHIQPQLPPVLQAPFAAAVARGEFKSMPNRSMPAANVDRDGVLMVGDALNMRHPLTGGGMTVALRDVEALCYLLETSTDLGDPAAMRVLKGRFARERKAWAATINVLANALHAVFSTP---AGNPTRKDLRDACFDYLSVGGYCAGGPINLLSGLTPRPSILALHFFLVAFHGVRKYLWPVPSWGGLGRTYEMLQVACEIIMPLLSVEKSTVLAAWPVRALVGLIFPY 678          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A6G0XPP6_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPP6_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 2.980e-137
Identity = 246/529 (46.50%), Postives = 323/529 (61.06%), Query Frame = 1
Query:  289 LEDP--EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKG---KGGEVVGVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSS-KDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
            +E+P  +V+IVGAGT G S A+ L +QG+KV +VEK M  QDR VGEL+QPGGL+AL +LGL ECA+   D V+  GY +I              DE+D ++L YP   P+N  EF G      G             GR FHN  FVQR+RE  + EPNV +VE TV+ LL     K     G++YR  A   +              APL +V+DG+WSGLR+  + + P+ +S+FV VL+TH    A VP +  GHV+LA PSP L+YQIS TETRVLVDV G +PS+++G L + L    APQ+PK  + AF+EAV  G VK+MPNR   ++       +++GD  NMRHPLTGGGMTVA+KDV LL +LL  V    +A +A V   F R+R  H+ST+NILANALY VFS P D S     RV L+ +C++YL +GG + AGP+GLL  L+P P +L  HFFMVA +     L P PTP+  L  YR+ H A  IIMPLLE+E  T L+W P+   + L+ P+
Sbjct:  125 IENPAADVIIVGAGTTGCSMAIALAKQGKKVFIVEKTMEYQDRFVGELMQPGGLQALRKLGLIECAETETD-VLTKGYTVIL-------------DEKDNIMLPYPDRVPQNFWEFLGVFRNDNGT--------GKQYGRCFHNGGFVQRLRERLMKEPNVTIVEGTVTKLLMADDAKANVCTGIQYRRRAPTEDV-----EMPVESATAPLVIVSDGLWSGLRRDLSKDSPKQISSFVAVLMTHPKMEATVPCRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSSSGALTEHLISYVAPQIPKESRAAFIEAVKTGPVKTMPNREFMTTQPSIGRVIMLGDTFNMRHPLTGGGMTVALKDVVLLSELLRDVDVTKSADIAAVRRTFERERVHHSSTVNILANALYHVFSVPLDGSDVAAARVTLRESCYEYLKMGGMFMAGPLGLLCALTPKPMILALHFFMVAGYAASRCLRPFPTPARLLHCYRVFHQACIIIMPLLERENVTVLAWAPLCALVNLIFPY 626          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A1V9ZRK4_9STRA (Squalene monooxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRK4_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 2.980e-130
Identity = 247/588 (42.01%), Postives = 337/588 (57.31%), Query Frame = 1
Query:  103 PLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAP---SPKAASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLP 1854
            PL+   A  + +L YL GF G+          +A  PAP   + K A  N                 D +V+I+G GT G + A+ L +QG+KVL+ EK +  QDR VGEL+QPGGL AL  L L +CA+   D +  +GY I+        K ++ S+  D V+L YP   PK   E+ G    P G             GR FHN +FV R+R    A  NV  +E TV+ L+     ++  GV+YR  A   +           +  APL +V DG+WSGLR+  + ++P+ +S+F+ +L+ H    A VP +  GHV+LA PSP ++YQIS TETRVLVDV G +PS +NG L K L E  APQ+P++   AF++AV  G VKSMPNR   ++       ++IGD+ NMRHPLTGGGM+VA++D  LL  LL  V F D  A+A+    F   R  H+STINILANALY VF+ P+  S+   R DL+ +C+ YL LGG +S+GP+GLL  L+P P+VL THFFMVA +     L P+PTP   L  YR+ H A  IIMPLLE+E  T L+W P+   + ++ P
Sbjct:   83 PLSFEQAAGVVALVYLLGFVGM----------WAVKPAPKYTNDKYAEPNP----------------DADVIIIGGGTTGCAMAMGLAKQGKKVLVFEKTLEYQDRFVGELMQPGGLDALRSLDLLDCAETETD-IKADGYYIL--------KTKKGSE--DHVVLPYPERIPKTFLEYLGYSRAPNGTAKQ--------YGRGFHNGKFVDRLRAKVFAHENVTCIEGTVTKLISDTKTDICRGVQYRRKAPAEDVD-----MPVEQAKAPLVIVCDGLWSGLRRELSTDQPKQISSFIAILMKHPAMEASVPFRGYGHVILAEPSPIVVYQISPTETRVLVDVPGKVPSQSNGDLTKHLLEVVAPQMPEASHAAFIQAVNEGPVKSMPNREFMTTQPSLGRCIMIGDSWNMRHPLTGGGMSVALRDAVLLSDLLGKVDFVDADAIAQARHTFEETRVNHSSTINILANALYHVFAIPDGYSNVAAREDLRESCYQYLKLGGMFSSGPLGLLCALTPKPFVLATHFFMVAGYAASRVLGPVPTPGRLLHCYRVFHEACMIIMPLLERENVTILAWTPLACLINVIFP 620          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A485KQF9_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQF9_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 3.460e-130
Identity = 238/525 (45.33%), Postives = 317/525 (60.38%), Query Frame = 1
Query:  301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKD-----TRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
            +V+I+G GTAGAS AV L +QGRKVL+ EK +  QDR VGEL+QPGGL+AL  LGL +CA+   D ++ +GY ++               + D + L YP   P+   E+ G      G             GR FHN  FVQR+R   LAEPNV V+E TVS LL+     V  GV YR  A   +         T +  APL +V+DG+WSGLR   +N++P+ +S+FV VL+TH    A VP +  GHV+LA PSP L+YQIS TETRVLVDV G +PS ++G L   L    APQ+P + + AF+EAV  G VKSMPNR   ++       +++GD+ NMRHPLTGGGMTVA+KDV LL  LL+       A +A V   F  +R  H+ST+NILANALY +FS P D    D      R  L+ +CF+YL +GG +SAGP+GLL  L+P P++L  HFFMVA +     L P P+PS  +  +++ H A +IIMPLLE+E  T L+W P+   + L+ P+
Sbjct:  130 DVIIIGGGTAGASMAVGLAKQGRKVLVFEKTLEYQDRFVGELMQPGGLQALRTLGLLDCAETEND-IMTHGYYVLT--------------KDDHIHLPYPDRVPQTFLEYLGVSRADNGT--------GKQYGRGFHNGAFVQRLRARLLAEPNVTVIEGTVSKLLQADKANVCQGVVYRRKAPSDDVD-----MPTEQATAPLVIVSDGLWSGLRGALSNDKPKLISSFVAVLMTHPKMEATVPFRQHGHVILAEPSPILMYQISQTETRVLVDVPGKVPSQSSGALEAHLLTHVAPQIPDASRAAFIEAVKTGPVKSMPNREFMTTQPTMGRVIMLGDSFNMRHPLTGGGMTVALKDVVLLNDLLKDADLTRAADVAAVRRAFELERIHHSSTVNILANALYFIFSVPADDDGSDPRRALVRETLRESCFEYLKMGGMFSAGPLGLLCALTPKPFILALHFFMVAGYAGWRCLKPFPSPSRLVLCFQVFHEACRIIMPLLERENVTILAWPPLCALINLIFPY 626          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: W4HAJ6_9STRA (Squalene monooxygenase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAJ6_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 1.040e-129
Identity = 238/529 (44.99%), Postives = 314/529 (59.36%), Query Frame = 1
Query:  301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLL-----KGKGGEVVGVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRA-LSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTP----EDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
            +V+IVGAGTAG S AV L +QGRKVL++EK +  QDR VGEL+QPGGL AL  L L ECA+   D V   GY+I+   +             D ++L YP   P    E+ G      G             GR FHN  FVQR+R   LAEPNV VVE TVS LL     K       G+++R  A   +              APL + +DG+WSGLR+  + + P+ +S+FV +L+TH    A VP +N GHV+LAHPSP L+YQIS TETRVLVDV G +PS++NG L K L    APQ+P + + AF+ AV  G VKSMPNR  +++   H    +++GD  NMRHPLTGGGM+VA+KDV LL  LL+ V       +A V   F + R  H+ST+NILANALY +FS P    +D      R  L+ +C++YL +GG + AGP+GLLS L+P P+VL THFFMVA +     L P PTP      +++ H A  IIMPLLE+E  T L+W P++  + ++ P+
Sbjct:  128 DVIIVGAGTAGCSMAVGLAKQGRKVLVIEKSLEYQDRFVGELMQPGGLEALRSLDLIECAETSTD-VKTLGYSILLPHS-------------DHIMLPYPDRAPHTFLEYMGLSRADNGT--------GKQHGRGFHNGAFVQRLRARMLAEPNVTVVEGTVSKLLLEQPAKSSTSVCTGIQFRRKALSDDV-----EMPVETASAPLVIASDGLWSGLRRDLSTDVPKQISSFVAILMTHPAMEATVPFRNFGHVILAHPSPILMYQISPTETRVLVDVPGKVPSSSNGDLTKHLLTHVAPQIPDASRAAFVRAVETGPVKSMPNREFMTTQPAHIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNNLLKNVDLSSGKDVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSADDDDKHVLAARATLRESCYEYLKMGGVFMAGPLGLLSALTPKPFVLATHFFMVAGYAAIRCLAPFPTPYRLYHCFQVFHQACVIIMPLLERENVTILAWAPLRALINVIFPY 629          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A024UQZ3_9STRA (Squalene monooxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQZ3_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 6.570e-129
Identity = 236/534 (44.19%), Postives = 318/534 (59.55%), Query Frame = 1
Query:  301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLL-----KGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQG-TLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPE------DPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEH 1863
            +V++VGAGTAG S A+ L +QGRKVL+VEK +  QDR VGEL+QPGGL AL  L L +CA+  +D V   GY+I++                D ++L YP+C PK   E+ G      G             GR FHN  FVQR+R   LAEPN+ VVE TVS L+     KG    V  G+++R  +   +             LAPL + +DG+WSGLR+  + ++P+ +S+FV +L+TH    A VP +  GHV+LA PSP L+YQIS TETRVLVDV G +PS+ NG L K L    APQ+P++ + AF+ AV  G VKSMPNR   ++     G  +++GD  NMRHPLTGGGM+VA+KDV LL +LL+ V       +A V   F + R  H+ST+NILANALY +FS P       D +    R  L+ +C++YL +GG + AGP+GLLS L+P P VL THFFMVA       L P PTPS      ++ H A  IIMPLLE+E  T  +W P++  + ++ P+ +
Sbjct:  130 DVIVVGAGTAGCSIAMGLAKQGRKVLVVEKSLEYQDRFVGELMQPGGLEALRSLDLIDCAETSMD-VKTLGYSILRP-------------HHDHIMLPYPNCAPKTLIEYMGFTRNDNGT--------GKQHGRGFHNGAFVQRLRARILAEPNITVVEGTVSKLVLEPTTKGSQSNVCKGIQFRRKSPSDDV-----EMPVETALAPLVIASDGLWSGLRRDLSKDQPKQISSFVALLMTHPAMEATVPFRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSTNGDLTKHLLSHVAPQIPEASRAAFIRAVETGPVKSMPNREFMTTQPANIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNELLKNVDLSSGKEVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSTDDDVVDKAVLAARATLRESCYEYLKMGGFFMAGPLGLLSALTPKPVVLATHFFMVAGFAASRCLAPFPTPSRVYHCCQVFHQACIIIMPLLERENVTIFAWAPLRAMINVIFPYRN 636          
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A067C943_SAPPC (Squalene monooxygenase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C943_SAPPC)

HSP 1 Score: 411 bits (1056), Expect = 6.660e-128
Identity = 241/586 (41.13%), Postives = 329/586 (56.14%), Query Frame = 1
Query:  103 PLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
            PL+   A  + +L YL GF G+  +             P+PK  + +K T A            D +V+I+G GT G + A+ L +QG+KVL+ EK +  QDR VGEL+QPGGL AL  L L +CA+   D +  +GY I++                D ++L YP   PK   E+ G      G             GR FHN  FV R+R    A  NV  +E TV+ LL     ++  GV+YR  A   +         T    APL LV DG+WSGLR+  +   P+ +S+F+ +L+ H P  A VP++  GHV+LA PSP ++YQIS TETR LVDV G +PS +NG L K L    APQ+P++ + AF++AV  G VKSMPNR   ++       ++IGD+ NMRHPLTGGGM+VA++D  LL  LLE     D  A+A     F  QR  H+STINILANALY VFS P+  S+   R +++ +C+ YL LGG +S+GP+GLL  L+P P+VL  HF MVA +     L P PTPS  +  YR+ H A  I+MPL+ +E  TFL+W P+   + LL P+
Sbjct:   83 PLSFVQAAGVVALVYLLGFVGMWAVK------------PTPKYTN-DKYTEAN----------RDADVIIIGGGTTGCAMAMGLAKQGKKVLVFEKTLEYQDRFVGELMQPGGLDALRSLDLLDCAETETD-IKADGYTIVKTKKGA----------EDHIMLPYPERVPKTFFEYMGFARGDNGT--------GKQHGRGFHNGLFVDRLRAKVFAHENVTCIEGTVTKLLSDSKTDICRGVQYRRKATSDDV-----EMPTEHAKAPLVLVCDGLWSGLRRELSTESPKQISSFIAILMKHPPMEATVPYRGYGHVILAEPSPIVVYQISPTETRALVDVPGKVPSQSNGDLTKHLINVVAPQMPEASRAAFVQAVQDGPVKSMPNREFMTTQPSLGRCIMIGDSWNMRHPLTGGGMSVALRDAVLLSSLLEKTDLVDADAIAAARHAFEEQRVNHSSTINILANALYHVFSIPDGYSNAAAREEIRESCYQYLKLGGMFSSGPLGLLCALTPKPFVLVAHFCMVAGYAASRVLTPFPTPSKLVHCYRVFHEACLILMPLVLREDVTFLAWTPIAAFINLLFPY 621          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHT1_9PHAE0.000e+073.25Squalene monooxygenase n=1 Tax=Ectocarpus sp. CCAP... [more]
D7G804_ECTSI0.000e+074.08Squalene monooxygenase n=1 Tax=Ectocarpus siliculo... [more]
A0A836CDI9_9STRA3.930e-20956.62Squalene monooxygenase n=1 Tax=Tribonema minus Tax... [more]
A0A4D9D9N2_9STRA6.330e-15647.90Squalene monooxygenase n=2 Tax=Monodopsidaceae Tax... [more]
A0A6G0XPP6_9STRA2.980e-13746.50Squalene monooxygenase n=1 Tax=Aphanomyces euteich... [more]
A0A1V9ZRK4_9STRA2.980e-13042.01Squalene monooxygenase n=1 Tax=Achlya hypogyna Tax... [more]
A0A485KQF9_9STRA3.460e-13045.33Squalene monooxygenase n=1 Tax=Aphanomyces stellat... [more]
W4HAJ6_9STRA1.040e-12944.99Squalene monooxygenase n=3 Tax=Aphanomyces astaci ... [more]
A0A024UQZ3_9STRA6.570e-12944.19Squalene monooxygenase n=2 Tax=Aphanomyces invadan... [more]
A0A067C943_SAPPC6.660e-12841.13Squalene monooxygenase n=2 Tax=Saprolegnia TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12602contigH-elongata_contig12602:862..4355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score900.2
Seed ortholog evalue5.3e-259
Seed eggNOG ortholog2880.D7G804
KEGG rclassRC00201
KEGG koko:K00511
KEGG ReactionR02874
KEGG Pathwayko00100,ko00909,ko01100,ko01110,ko01130,map00100,map00909,map01100,map01110,map01130
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004497,GO:0004506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006629,GO:0006694,GO:0006950,GO:0008150,GO:0008152,GO:0008202,GO:0008610,GO:0009058,GO:0009414,GO:0009415,GO:0009611,GO:0009628,GO:0009719,GO:0009725,GO:0009753,GO:0010033,GO:0010035,GO:0012505,GO:0016125,GO:0016126,GO:0016491,GO:0016705,GO:0016709,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1901700
EggNOG free text desc.squalene monooxygenase activity
EggNOG OGsCOG0654@1,KOG1298@2759
EC1.14.14.17
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionSqualene Monooxygenase (N-terminal region)
Ec32 orthologEc-06_009670.1
Exons3
Model size3056
Cds size1836
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12602.1938.1prot_H-elongata_contig12602.1938.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12602 2034..4307 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929745.9476874-UTR-H-elongata_contig12602:861..20331622929745.9476874-UTR-H-elongata_contig12602:861..2033Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12602 862..2033 -
1691679141.3597305-UTR-H-elongata_contig12602:861..20331691679141.3597305-UTR-H-elongata_contig12602:861..2033Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12602 862..2033 -
1622929746.012063-UTR-H-elongata_contig12602:4307..43551622929746.012063-UTR-H-elongata_contig12602:4307..4355Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12602 4308..4355 -
1691679141.411222-UTR-H-elongata_contig12602:4307..43551691679141.411222-UTR-H-elongata_contig12602:4307..4355Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12602 4308..4355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929745.9648297-CDS-H-elongata_contig12602:2033..24051622929745.9648297-CDS-H-elongata_contig12602:2033..2405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2034..2405 -
1691679141.3758142-CDS-H-elongata_contig12602:2033..24051691679141.3758142-CDS-H-elongata_contig12602:2033..2405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2034..2405 -
1622929745.9762614-CDS-H-elongata_contig12602:2687..28281622929745.9762614-CDS-H-elongata_contig12602:2687..2828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2688..2828 -
1691679141.3852835-CDS-H-elongata_contig12602:2687..28281691679141.3852835-CDS-H-elongata_contig12602:2687..2828Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2688..2828 -
1622929745.9969273-CDS-H-elongata_contig12602:2984..43071622929745.9969273-CDS-H-elongata_contig12602:2984..4307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2985..4307 -
1691679141.3990445-CDS-H-elongata_contig12602:2984..43071691679141.3990445-CDS-H-elongata_contig12602:2984..4307Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12602 2985..4307 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12602.1938.1

>prot_H-elongata_contig12602.1938.1 ID=prot_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=612bp
MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPP
FAQSPAPSPKAASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAV
TLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDS
VIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVT
PKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLL
KGKGGEVVGVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRK
CANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISS
TETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDV
KSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLL
EGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKD
TRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCR
THLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLL
LPWEHERWENN*
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mRNA from alignment at H-elongata_contig12602:862..4355-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12602.1938.1 ID=mRNA_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3494bp|location=Sequence derived from alignment at H-elongata_contig12602:862..4355- (Himanthalia elongata Himel1 dioecious)
AGGCTGTACGTGGTGAACTACATTGCCGTGGTGGTGTTCGCGGTGTCCAT GTACAGGATCGTGCGAATCTGGAACGGGACCCTCAACCCGATTAATGCCT TCCCCCTGGCCCTTCCGATCGCTGGGGCGATTGCCTCCCTCACATACCTC TTCGGCTTCTTCGGTGTCAGCATTATCTCGGCGGTAATGGACCCTCCCTT CGCCCAGTCCCCCGCTCCCAGCCCCAAGGCCGCCTCAGCCAACAAGCCTA CAGGGGCGATGTCTGCGAGTGGATCCTCGGTGTATAGCTTAGAGGACCCG GAGGTGGTGATTGTCGGGGCGGGGACAGCGGGCGCGTCGGCCGCTGTGAC CTTAGGGCGTCAGGGTCGCAAGGTCCTCTTGGTGGAAAAATGCATGCGTG AGCAGGACCGGATCGTGGGGGAGCTACTGCAGCCGGGCGGACTGCGTGCA CTAGAGCGTCTCGGGTTGGACGAGTGTGCCAAGGAAGGCATCGACAGTGT CATTGTAAATGGATATGCCATTATTCAGGCAGCCAACGCCATCATTGAGA AGCGGGAGCGAGACTCGGACGAGCGCGATGGCGTCCTGCTGTATTACCCA TCATGTGACCCCAAAAACAAGACGGAGTTTTTTGGTAAGGGAGTCACGCC TAAAGGGGCTGTCGATGCCGATATTAAGCGGGATGATGTACCTCGAGGGC GGAGCTTCCACAACTCTAGATTCGTGCAGAGGATTCGGGAAGTCGCCCTG GCAGAACCGAACGTACGCGTCGTTGAGGCAACCGTTTCAGGCCTGCTCAA GGGTAAAGGCGGGGAGGTCGTGGGAGTTAGGTACCGCGAGGCGGCCAAAG AAGGTGAGGAGGGCGCAGGTGCTCAAGCGCGGGTGACACGAGAGGTGCTC GCGCCGCTGACCCTGGTGGCGGACGGCATCTGGAGCGGTCTGCGAAAGTG CGCCAACAATAATCGCCCGCAGACGCTGTCGACGTTTGTGGGAGTGCTGG TCACACATGAACCTAACGCCGCTCCGGTGCCTCACAAAAACTGTGGACAT GTGGTGCTCGCGCACCCTTCTCCCAGCCTCATCTACCAGATCTCTTCGAC GGAGACGCGGGTTCTCGTCGACGTCGCTGGCTCTATGCCCAGCGCGGCGA ACGGCGGGCTGGTGAAGTTCTTGAGGGAGGAGTCCGCGCCGCAGCTCCCC AAGAGCTTCCAACCGGCGTTCCTGGAGGCCGTGGCTCGTGGAGATGTGAA GTCTATGCCGAACAGAGCCTTGTCGTCGTCGAACGTGCACCGACAGGGAA CATTGCTGATCGGAGACGCCTTGAACATGCGTCATCCCTTAACCGGAGGG GGTATGACAGTGGCAATCAAGGTGTGGATCTTCATAGAACAAAGTGTCGT GTTTGGCGTGCATGTGTCCCATGCCCCTTGACCCCGTGTTGCTTTTTTTC TCCCAGTTCCTTCCAACCCCTTAAAATTCAAAGTTAACGGTGGGCGTCTT CACATTGATTTTCGTCCGTCCCTTCAGGACGTGGAGCTGCTGTGCAAGCT ACTGGAGGGAGTGTCGTTCGAAGACACCGCCGCGATGGCCGAGGTGTCAT CGCGCTTCCACCGACAGAGGACAGCGCACGCCTCCACGATCAACATATTG GCGAATGCGTTGTACCAGGTACGGCGTCCGCCTCGCTAAAAGGGCATCCT TTACGAATATAATATGTTGCATTCGAAGTGGCAAAATATCGCACGCTCTC AGCTACAGTAGTGGATGGACTCGTCAGTTGCCGCTTTAGTTGTGATCAGA GATAGTTCTTAACTCCCGTGCCGTGCCGTGCCATCAGAAGTGTGTGGATA ATACACATTTGCGCAAGCGAACGGTTTTATTGCTGACATGATTGGACTAT ATATTTACCGTTCAAATGCCGACCCTGTCCCCTGTCCCTTCACGTTCCAG GTTTTCAGCACCCCAGAAGACCCCTCTTCCAAGGATACCCGCGTCGACCT GCAGACGGCGTGCTTCGACTACTTGAGCCTGGGCGGCTGCTATTCCGCAG GCCCCGTAGGCCTCCTGTCTGGCCTTAGCCCCGTGCCCTGGGTGCTCACA ACCCATTTTTTTATGGTGGCCTTCCACGGCTGTCGTACGCACCTGTTACC GATGCCAACTCCCTCGGGCTTCCTACGAGTGTACCGTCTGCTTCACGTGG CTACAAAGATCATCATGCCGCTTCTCGAGCAGGAGGGTTCGACGTTCCTA TCCTGGTGGCCTGTCAAGAAGGCGATGCAGTTGCTGCTCCCTTGGGAGCA CGAGAGATGGGAGAACAACTGAGCCCCAAGAGCCTTCGAAGGAGGGTATC GTGAAGCATGATTTTTTTGAAGGATGTTTTTTTTGTAAGCATGATTTTTT ATCTTCCAGAAAGAAGGGAAATTAATTTGTCGCATGGTGGATCTCGCTTG TCAGTACTCCATCTTTCCAGAGAGACAAGTGATCGCAATTTTTTGACAAT TTGTGTTAGTTGGCGAACAGACGCAGCGTTACCCGAGGTACAAATTTCAC TTTTCAGAGATGATTTCCGTCCCTGGCGTCAAATCATATCCGAAAAAACG TGGATTTGCCTCCCTGCACTATTGGTTTAATTAGTTCGAAGCTCAAGTCT GACGTCTCCCCGAGCAAATCGGCCATTCGGTCATTTATTGGAGGTGGATT AATGATAATTCCTCCGAGGCTGCTGACCTCTTTTCTGTCAGCAAACGTGA GTGGCGCGCGATGTCCTGGAGCAGCCTTTAATAGTTTGATCGTGACGTGC ACCATTGTTCTCCTAAATAGTGGAGTTGTATCGAAGCGGTGCCTTAATGT CATTGGGAATACGGAGGCTTGTTTTTTATCGTATCCGGCAAAGTGTGGGA TAAAGGTCACGTTCACGGTCACGGCGGATTTGGTCGGTTGACAGAGGGTT TCGAGTCAATGGGGGCATTATGATGTGTGAGTGCGTTTAGGGAGCACTAT ATAGCACTATGGTGATCAAATACGGTACTACCGTACTCTCTCCATTTTTG TTTTCAATAAGCCTTTTTCCATTTTTGTTTTTTGAGGTATCCCGAATCTG ATCCTTTGCAAGGAAGGAAGGAAGGAAGGTGTATCGTCATAGTGAAGATT CTACATCTGTTTGCTATACTGTAGCTCCTGATAACGGAACTGTGTAGGCC CTCGACTCAGCAATAATTCGTTCGTCCTCTGTCTTGAGTACTATAATGGT ACTCAAAACGATTTGCACATCTCCAAAGTGCTTTCGATCATGGTCATAGT CGTCATGGAAGTACGTTCCCGTGATCGATTTTTATTGGTTCATTTACCTC CGCAGACGAGGCGGCACGATTTTTTACGCTATTCTAGTGATAATTCCTTT TGTTCGCTGTTTCTCGATGACATTTCTTGTTTTCAGAAACTTGTGCTTCG AGAAAAATAATACTAGTACTAAAAAAGCAAAATACTTTATCCCG
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Coding sequence (CDS) from alignment at H-elongata_contig12602:862..4355-

>mRNA_H-elongata_contig12602.1938.1 ID=mRNA_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3672bp|location=Sequence derived from alignment at H-elongata_contig12602:862..4355- (Himanthalia elongata Himel1 dioecious)
ATGTACAGGATCGTGCGAATCTGGAACGGGACCCTCAACCCGATTAATGC
CTTCCCCCTGGCCCTTCCGATCGCTGGGGCGATTGCCTCCCTCACATACC
TCTTCGGCTTCTTCGGTGTCAGCATTATCTCGGCGGTAATGGACCCTCCC
TTCGCCCAGTCCCCCGCTCCCAGCCCCAAGGCCGCCTCAGCCAACAAGCC
TACAGGGGCGATGTCTGCGAGTGGATCCTCGGTGTATAGCTTAGAGGACC
CGGAGGTGGTGATTGTCGGGGCGGGGACAGCGGGCGCGTCGGCCGCTGTG
ACCTTAGGGCGTCAGGGTCGCAAGGTCCTCTTGGTGGAAAAATGCATGCG
TGAGCAGGACCGGATCGTGGGGGAGCTACTGCAGCCGGGCGGACTGCGTG
CACTAGAGCGTCTCGGGTTGGACGAGTGTGCCAAGGAAGGCATCGACAGT
GTCATTGTAAATGGATATGCCATTATTCAGGCAGCCAACGCCATCATTGA
GAAGCGGGAGCGAGACTCGGACGAGCGCGATGGCGTCCTGCTGTATTACC
CATCATGTGACCCCAAAAACAAGACGGAGTTTTTTGGTAAGGGAGTCACG
CCTAAAGGGGCTGTCGATGCCGATATTAAGCGGGATGATGTACCTCGAGG
GCGGAGCTTCCACAACTCTAGATTCGTGCAGAGGATTCGGGAAGTCGCCC
TGGCAGAACCGAACGTACGCGTCGTTGAGGCAACCGTTTCAGGCCTGCTC
AAGGGTAAAGGCGGGGAGGTCGTGGGAGTTAGGTACCGCGAGGCGGCCAA
AGAAGGTGAGGAGGGCGCAGGTGCTCAAGCGCGGGTGACACGAGAGGTGC
TCGCGCCGCTGACCCTGGTGGCGGACGGCATCTGGAGCGGTCTGCGAAAG
TGCGCCAACAATAATCGCCCGCAGACGCTGTCGACGTTTGTGGGAGTGCT
GGTCACACATGAACCTAACGCCGCTCCGGTGCCTCACAAAAACTGTGGAC
ATGTGGTGCTCGCGCACCCTTCTCCCAGCCTCATCTACCAGATCTCTTCG
ACGGAGACGCGGGTTCTCGTCGACGTCGCTGGCTCTATGCCCAGCGCGGC
GAACGGCGGGCTGGTGAAGTTCTTGAGGGAGGAGTCCGCGCCGCAGCTCC
CCAAGAGCTTCCAACCGGCGTTCCTGGAGGCCGTGGCTCGTGGAGATGTG
AAGTCTATGCCGAACAGAGCCTTGTCGTCGTCGAACGTGCACCGACAGGG
AACATTGCTGATCGGAGACGCCTTGAACATGCGTCATCCCTTAACCGGAG
GGGGTATGACAGTGGCAATCAAGATGTACAGGATCGTGCGAATCTGGAAC
GGGACCCTCAACCCGATTAATGCCTTCCCCCTGGCCCTTCCGATCGCTGG
GGCGATTGCCTCCCTCACATACCTCTTCGGCTTCTTCGGTGTCAGCATTA
TCTCGGCGGTAATGGACCCTCCCTTCGCCCAGTCCCCCGCTCCCAGCCCC
AAGGCCGCCTCAGCCAACAAGCCTACAGGGGCGATGTCTGCGAGTGGATC
CTCGGTGTATAGCTTAGAGGACCCGGAGGTGGTGATTGTCGGGGCGGGGA
CAGCGGGCGCGTCGGCCGCTGTGACCTTAGGGCGTCAGGGTCGCAAGGTC
CTCTTGGTGGAAAAATGCATGCGTGAGCAGGACCGGATCGTGGGGGAGCT
ACTGCAGCCGGGCGGACTGCGTGCACTAGAGCGTCTCGGGTTGGACGAGT
GTGCCAAGGAAGGCATCGACAGTGTCATTGTAAATGGATATGCCATTATT
CAGGCAGCCAACGCCATCATTGAGAAGCGGGAGCGAGACTCGGACGAGCG
CGATGGCGTCCTGCTGTATTACCCATCATGTGACCCCAAAAACAAGACGG
AGTTTTTTGGTAAGGGAGTCACGCCTAAAGGGGCTGTCGATGCCGATATT
AAGCGGGATGATGTACCTCGAGGGCGGAGCTTCCACAACTCTAGATTCGT
GCAGAGGATTCGGGAAGTCGCCCTGGCAGAACCGAACGTACGCGTCGTTG
AGGCAACCGTTTCAGGCCTGCTCAAGGGTAAAGGCGGGGAGGTCGTGGGA
GTTAGGTACCGCGAGGCGGCCAAAGAAGGTGAGGAGGGCGCAGGTGCTCA
AGCGCGGGTGACACGAGAGGTGCTCGCGCCGCTGACCCTGGTGGCGGACG
GCATCTGGAGCGGTCTGCGAAAGTGCGCCAACAATAATCGCCCGCAGACG
CTGTCGACGTTTGTGGGAGTGCTGGTCACACATGAACCTAACGCCGCTCC
GGTGCCTCACAAAAACTGTGGACATGTGGTGCTCGCGCACCCTTCTCCCA
GCCTCATCTACCAGATCTCTTCGACGGAGACGCGGGTTCTCGTCGACGTC
GCTGGCTCTATGCCCAGCGCGGCGAACGGCGGGCTGGTGAAGTTCTTGAG
GGAGGAGTCCGCGCCGCAGCTCCCCAAGAGCTTCCAACCGGCGTTCCTGG
AGGCCGTGGCTCGTGGAGATGTGAAGTCTATGCCGAACAGAGCCTTGTCG
TCGTCGAACGTGCACCGACAGGGAACATTGCTGATCGGAGACGCCTTGAA
CATGCGTCATCCCTTAACCGGAGGGGGTATGACAGTGGCAATCAAGGACG
TGGAGCTGCTGTGCAAGCTACTGGAGGGAGTGTCGTTCGAAGACACCGCC
GCGATGGCCGAGGTGTCATCGCGCTTCCACCGACAGAGGACAGCGCACGC
CTCCACGATCAACATATTGGCGAATGCGTTGTACCAGGACGTGGAGCTGC
TGTGCAAGCTACTGGAGGGAGTGTCGTTCGAAGACACCGCCGCGATGGCC
GAGGTGTCATCGCGCTTCCACCGACAGAGGACAGCGCACGCCTCCACGAT
CAACATATTGGCGAATGCGTTGTACCAGGTTTTCAGCACCCCAGAAGACC
CCTCTTCCAAGGATACCCGCGTCGACCTGCAGACGGCGTGCTTCGACTAC
TTGAGCCTGGGCGGCTGCTATTCCGCAGGCCCCGTAGGCCTCCTGTCTGG
CCTTAGCCCCGTGCCCTGGGTGCTCACAACCCATTTTTTTATGGTGGCCT
TCCACGGCTGTCGTACGCACCTGTTACCGATGCCAACTCCCTCGGGCTTC
CTACGAGTGTACCGTCTGCTTCACGTGGCTACAAAGATCATCATGCCGCT
TCTCGAGCAGGAGGGTTCGACGTTCCTATCCTGGTGGCCTGTCAAGAAGG
CGATGCAGTTGCTGCTCCCTTGGGAGCACGAGAGATGGGAGAACAACTGA
GTTTTCAGCACCCCAGAAGACCCCTCTTCCAAGGATACCCGCGTCGACCT
GCAGACGGCGTGCTTCGACTACTTGAGCCTGGGCGGCTGCTATTCCGCAG
GCCCCGTAGGCCTCCTGTCTGGCCTTAGCCCCGTGCCCTGGGTGCTCACA
ACCCATTTTTTTATGGTGGCCTTCCACGGCTGTCGTACGCACCTGTTACC
GATGCCAACTCCCTCGGGCTTCCTACGAGTGTACCGTCTGCTTCACGTGG
CTACAAAGATCATCATGCCGCTTCTCGAGCAGGAGGGTTCGACGTTCCTA
TCCTGGTGGCCTGTCAAGAAGGCGATGCAGTTGCTGCTCCCTTGGGAGCA
CGAGAGATGGGAGAACAACTGA
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