mRNA_H-elongata_contig12593.1934.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: D8LBH2_ECTSI (Asparaginase, c-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH2_ECTSI) HSP 1 Score: 324 bits (830), Expect = 4.650e-106 Identity = 165/254 (64.96%), Postives = 202/254 (79.53%), Query Frame = 3
Query: 513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGA---DVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESDLP 1265
M+G +M+YGAV+A+R + + +AAR+VMERSPH VLAGEGAT FA+ NG+EAAE LTD++++ FE WR + + S+ RGESHDTV ++CLD DGNL AGTSTSGWKFK PGRVGD+PVVG+GLYCD+SVGAAVATGDGE+ILRTCLSF VVE MR GDSP LACKKGI+R E V R G +V+RMHD +TVAVMAM+ G++GAASTLGP +VHRGRP FPLA+WRKG+ RVV E+++P
Sbjct: 1 MEGTSMSYGAVLAVRGVV---KAFSAARVVMERSPHSVLAGEGATTFAVRNGIEAAETLTDDAKQQFEDWRRQHLEEEG----SDHRGESHDTVGVICLDHDGNLCAGTSTSGWKFKHPGRVGDAPVVGSGLYCDSSVGAAVATGDGEEILRTCLSFAVVEFMRGGDSPQLACKKGIARLEETVKRSAAGRSVEEVNRMHDRLTVAVMAMNPKGDIGAASTLGPRNVHRGRPSFPLAIWRKGDPVRVVEETEIP 247
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A7S4KZ67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZ67_GUITH) HSP 1 Score: 288 bits (736), Expect = 2.400e-90 Identity = 158/290 (54.48%), Postives = 198/290 (68.28%), Query Frame = 3
Query: 303 KVRPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLG 1172
KV P A+ATW FGEIAV A L +G +A+DA E + AVELD QDQYFVG+GGLPN DGVMELDAA+M G+ G V+A+ QG+ S+ ++ AR +ME H VLAGEGA FAL NG + LTDESR+ FE W+ +Q + D+ SHDT+ ++C D+ G L TSTSGWKFK PGRVGDSP+VG+G Y D + GAAVATGDGE+I+R CLSFLVVE MR GDSP AC+ I+R R I +R H +TV ++AM++ G+VGA+STLG
Sbjct: 34 KVTPCAVATWKFGEIAVREAARWLAEGHSAVDAAE-RAVNAVELDTQDQYFVGVGGLPNRDGVMELDAAIMRGRGYRLGCVLAV-QGI--STPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN-------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARLRAIQSSGASFQGENRQHKKLTVGIVAMNTNGDVGASSTLG 312
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: W7U6H4_9STRA (N-(Beta-n-acetylglucosaminyl)-l-asparaginase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6H4_9STRA) HSP 1 Score: 285 bits (730), Expect = 1.990e-88 Identity = 169/345 (48.99%), Postives = 216/345 (62.61%), Query Frame = 3
Query: 327 TWMFGEIAVDAAKGLLDDGAT--------------------ALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGK-----------AAGAGASEDRGES---HDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESD 1259
TW+FG +AV+ A +L +T ALDA+EA GI VELDNQDQY+VG GG PNA+G MELDAA+M G YG V A+ QG+ S +++ AR VME S H +L G GA+ FA + G E E L+ +R+ + W+ + GK +AG A G++ HDTV ++ LD GNLAAGTSTSGW FK PGRVGDSP+VG+GLY D++VG AVATGDGE+I+R CLSFLVVE MR G P LAC+ GI R + ++ G + MH+++TVAVMA+ G VGAASTLG + HRGRP FP VW++G V E+D
Sbjct: 88 TWLFGRLAVEKAAEVLLSSSTSPTAPPSIDHPSETNLATSIALDAVEA-GINVVELDNQDQYYVGYGGFPNAEGEMELDAAIMCGSRKTYGGVAAL-QGV--SRAISVARRVMEESVHSLLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNE-GKEGPQVDGRKEESAGVPAPPREGDAVAPHDTVGLLVLDAHGNLAAGTSTSGWCFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIQRLKVLIREGGGEGERQGMHESLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEEAD 427
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A4D9D6T5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T5_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.350e-80 Identity = 143/285 (50.18%), Postives = 182/285 (63.86%), Query Frame = 3
Query: 444 DQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASE-------------DRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESD 1259
+QY+VG GG PNA+G MELDAA+M G YG V A+ QG+ S +++ AR VME S H L G GA+ FA + G E E L+ +R+ + W+ + +A E D HDTV ++ LD GNLAAGTSTSGW+FK PGRVGDSP+VG+GLY D++VG AVATGDGE+I+R CLSFLVVE MR G P LAC+ GI R + ++ G + MH+N+TVAVMA+ G VGAASTLG + HRGRP FP VW++G V E+D
Sbjct: 4 EQYYVGYGGFPNAEGEMELDAAIMCGSRKTYGGVAAL-QGV--SRAISVARRVMEESVHSFLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNEGKEAPQVDGREEESARVPAPPREGDAAAPHDTVGLLVLDAHGNLAAGTSTSGWRFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIRRLKALISEGGGEGERQGMHENLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEEAD 285
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A836CML1_9STRA (Asparaginase, c-terminal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML1_9STRA) HSP 1 Score: 253 bits (645), Expect = 5.240e-78 Identity = 141/260 (54.23%), Postives = 175/260 (67.31%), Query Frame = 3
Query: 513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQ--TGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREI-------VDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESDLP 1265
M G+ + YGAVMA+ + +++AARLVMERSPH +L G GA FA+ANG+ AEALT+ + + WR + + AGA S + HDT+ M+CLD +G+LAAGTSTSGW FK PGRVGDSPV+GAGLYCD GAAVATGDGE+ILRT +F VE MRAG +P AC K ++R + G AD SRMH +TVAV+AMS GEVGAAS+LGP++VHRGRPVFP A+WR G +V E P
Sbjct: 1 MCGEHLTYGAVMALPGVVR---AVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRAD-SRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPP 256
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: L1INR1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1INR1_GUITC) HSP 1 Score: 229 bits (585), Expect = 3.260e-69 Identity = 128/251 (51.00%), Postives = 167/251 (66.53%), Query Frame = 3
Query: 513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADV---SRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNES 1256
M G+ G V+A+ QG+ S+ ++ AR +ME H VLAGEGA FAL NG + LTDESR+ FE W+ +Q + D+ SHDT+ ++C D+ G L TSTSGWKFK PGRVGDSP+VG+G Y D + GAAVATGDGE+I+R CLSFLVVE MR GDSP AC+ I+R R + L GA +R H +TV ++AM++ G+VGA+STLGP ++HRG+P FP VW++ A RV ES
Sbjct: 1 MRGRGYRLGCVLAV-QGI--STPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN-------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARLRSKKEFLS-GASFQGENRQHKKLTVGIVAMNTNGDVGASSTLGPANIHRGKPAFPCIVWKQVGA-RVGGES 239
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A496SGX4_9BACT (Glycosylasparaginase n=4 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A496SGX4_9BACT) HSP 1 Score: 226 bits (577), Expect = 1.480e-67 Identity = 143/308 (46.43%), Postives = 188/308 (61.04%), Query Frame = 3
Query: 312 PTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEA 1235
P A+ATW FG+ AV+ A L +G TALDA+EA GI VE D + VGLGGLPN++GV+ELDAA+M+GKT+ GAV A+R LH ++ AR VME + H +L GEGA KFAL +G + T+ESR+ + W+ ++HDT+ +V LD +GN+AAG STSG +K PGRVGDSP+VGAGLY D VG A ATG GEDI+R C FLVVE+MR G SP AC + + R I +R G+ V+V ++A+ G GAA + +G FP AV +G +
Sbjct: 4 PAAVATWRFGKKAVEGAMKALREGGTALDAVEA-GIKVVEADPEVDS-VGLGGLPNSEGVVELDAAIMEGKTLRVGAVAALRDVLH---PISVARKVMEETQHVLLVGEGALKFALEHGFRKQDLTTEESRRKWREWK-----------------DAHDTIGLVVLDGEGNMAAGCSTSGSAYKLPGRVGDSPIVGAGLYVDDDVGGAAATGRGEDIMRYCSCFLVVEHMRRGLSPQEACLEVV---RRIYEREGK----------VSVNLVALDREGRYGAAG------IKKG---FPYAVGFEGRS 267
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A2D6CUP6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A2D6CUP6_9BACT) HSP 1 Score: 224 bits (570), Expect = 2.590e-66 Identity = 143/310 (46.13%), Postives = 187/310 (60.32%), Query Frame = 3
Query: 309 RPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEAT 1238
R A+ATW FG+ AV A+ L DG +A+DA+EA GI ELD ++ VG GGLPN DGV+++DAAVMDG T+ GAV ++ +G+ + ++ AR VM S H L GEGA +FA +G E LTDE+R+ ++ WR G+ G+ HDT+ ++ LD DGNLAAG STSG FK+ GRVGDSP++G+GLY D GAA ATG GE+IL+ C+SF VVE MRAG P AC+ SR ++ R E A+ AV+A+ G G +T R F AVWR GEAT
Sbjct: 13 RGVAVATWKFGQAAVAASGAALSDGGSAMDAVEA-GIRVAELD-ASEHSVGYGGLPNEDGVVQMDAAVMDGATLDVGAVASL-EGVR--APISVARRVMTDSRHVFLVGEGAGRFARKHGFGVEETLTDEARRKWQEWR----------GSPNRNGDGHDTIGLLSLDADGNLAAGCSTSGVGFKEVGRVGDSPLIGSGLYADNEGGAAAATGLGEEILKFCMSFQVVEFMRAGLPPTEACRAAASR---MLARRPETAEHM-------AAVVALDPQGRAGGYAT---------RDGFSYAVWRDGEAT 288
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A7C7Q882_9BACT (Glycosylasparaginase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A7C7Q882_9BACT) HSP 1 Score: 219 bits (558), Expect = 1.060e-64 Identity = 143/309 (46.28%), Postives = 181/309 (58.58%), Query Frame = 3
Query: 312 PTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELD-NQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEA 1235
P A+ATW FG+ AV+ A +L G ALDA+EA GI VE D N D VGLGG PN++GV+ELDAA+MDG T GAV A+R LH ++ AR VME + H +LAGEGA +FAL G + T++SR+ + W+ + HDT+ +V LD DGNLAAG STSGW +K PGRVGDSP+VGAGLY D VGAA ATG GEDI+R C FLVVE MR G P AC ++ R I +R G V + ++A+ G G A + +G FP AV +G +
Sbjct: 5 PVAVATWRFGKEAVEDAARVLRGGGNALDAVEA-GIRVVEADPNVDT--VGLGGAPNSEGVVELDAALMDGATCRAGAVAALRDILH---PISVARKVMEETSHVLLAGEGALRFALEQGFRRQDLTTEKSRRKWREWK---------------QARCHDTIGLVVLDGDGNLAAGCSTSGWAYKLPGRVGDSPIVGAGLYADNEVGAAAATGRGEDIMRYCSCFLVVEYMRQGLPPQEAC---LAVLRRIYEREG---------GKVQLCLIALDKEGRYGTAG------MKKG---FPYAVHLEGRS 271
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A524AQX5_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524AQX5_9CHLR) HSP 1 Score: 216 bits (550), Expect = 1.800e-63 Identity = 138/306 (45.10%), Postives = 183/306 (59.80%), Query Frame = 3
Query: 303 KVRPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVW 1220
+V P AIATW G +AV AA +L G +AL+A+E +GI +ELD D + VG GG PNA+G++ELDAA+MDG+T G+V A+R+ ++ AR VME S H +L +GA FAL++G A + LT ES WR Q + AG+ HDT+ +V LD +G++A G STSGW K PGRVGDSP++G+GLY D VG A ATG GE+IL+ C SFLVVE MR G SP+ AC++ I R + E VT+ ++A++ GE GAA T R F AVW
Sbjct: 5 RVVPGAIATWKTGLVAVRAAGQVLIAGGSALEAVE-KGINLIELD-PDVHSVGYGGWPNAEGIVELDAAIMDGRTHDAGSVAALRR---IRRPISVARRVMEASQHAMLVADGALAFALSHGFSAEDLLTQESMAK---WREWQRDEQAGSPTP------HDTIGLVALDGEGDIACGCSTSGWPHKPPGRVGDSPLIGSGLYVDNDVGGAAATGLGEEILKFCASFLVVEQMRNGHSPMDACRRTIERILRKKPQARE----------VTIGLVALNGRGESGAACT---------RSGFEYAVW 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12593.1934.1 >prot_H-elongata_contig12593.1934.1 ID=prot_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp MSYLHGPARTWLMLVAGCTIGALSIVAGVVSSRSKSKLNLFSVSASRHHEback to top mRNA from alignment at H-elongata_contig12593:5827..8429+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12593.1934.1 ID=mRNA_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2603bp|location=Sequence derived from alignment at H-elongata_contig12593:5827..8429+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12593:5827..8429+ >mRNA_H-elongata_contig12593.1934.1 ID=mRNA_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2352bp|location=Sequence derived from alignment at H-elongata_contig12593:5827..8429+ (Himanthalia elongata Himel1 dioecious)back to top |