mRNA_H-elongata_contig125917.1931.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig125917.1931.1
Unique NamemRNA_H-elongata_contig125917.1931.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: D8LBN0_ECTSI (MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBN0_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 4.930e-142
Identity = 224/323 (69.35%), Postives = 257/323 (79.57%), Query Frame = 1
Query:   31 QVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVD--------------------GAYPGGSVKVK----LFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGKLRYIQKDVEWELRKLFGSRVNVIFDVIVGHKR 927
            +VSAVSTKRHTTRENTLGVMTVG TQVFFHDTPGFVSH++RDDY+P L+A SREAI  V+LTLLLVDASK+VT RG  SL  LLE+ L+SR EVFLVLNK D V P+HRLL TTD IMD+AQ+IMDRID+ERE+A AA +                       GA  G  V  +    LFRDGGKTVDDH+TVFMVSAKTG GVEDVVDFLVHR+RPG WLF  D+TTN+D R+R+ EIVREGL+KHLYKELPY+I T  RELSRR DNSVSVLQELR++R SQKPI+LGKL+YI+KDVEW+LRKLFG+RV+  F VIVGHK+
Sbjct:   79 KVSAVSTKRHTTRENTLGVMTVGRTQVFFHDTPGFVSHEERDDYKPALSAESREAIAAVDLTLLLVDASKDVTKRGLRSLTGLLERVLRSRCEVFLVLNKSDLVHPRHRLLATTDEIMDRAQEIMDRIDSEREQAVAAVDTSPRHENGTAAXXXXXXXXXXNCGASNGSGVGERGQEPLFRDGGKTVDDHVTVFMVSAKTGHGVEDVVDFLVHRARPGAWLFGPDETTNKDKRSRVKEIVREGLYKHLYKELPYQITTHIRELSRRPDNSVSVLQELRLDRASQKPIVLGKLKYIKKDVEWDLRKLFGTRVDARFFVIVGHKK 401          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: UPI000C6CBB98 (GTPase Era, mitochondrial-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CBB98)

HSP 1 Score: 114 bits (286), Expect = 1.270e-25
Identity = 94/313 (30.03%), Postives = 154/313 (49.20%), Query Frame = 1
Query:   31 QVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVS--HQDRDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGS-LLSLLEQALKSRSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMT----------VFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGKLRYIQKDVEWELRKLFGS--RVNVIFDVIVGHK 924
            +V +VS K HTT+ NT  VM  G+TQ+ F DTPG VS  H  + + + +L      +I   ++  ++VDAS   T++     LL LL+Q   S  + FL+LNKVD VK KH LL+ +  ++ + ++I+              ++++        + KL ++  K   D +T          VFM+SA TGDGV+D+ ++L   + P  W++     TNQ      +  +RE L  HL KE+PY +  +   L    +  + +   +   R SQ  +++G    I   +  E R+   +  R NV   +I+ HK
Sbjct:   75 RVCSVSKKVHTTKHNTSVVMVDGDTQIVFLDTPGLVSPEHGKKHNLEHSLVVDPETSILHADVIAVIVDASNINTSKQLSKELLKLLQQ--NSNRKSFLILNKVDKVKIKHDLLKISRTLIGEEEKIV----------IPKKDKMNLNVLFQETERKLSKE--KPTADELTEMKGWKNFSKVFMISALTGDGVDDIRNYLFSLAYPSSWIYHSSVVTNQSPEEIAIMTIREKLLNHLPKEIPYNLDLKLEMLEETNEGLLRIAVLIICPRKSQVKLIIGGKGKIVSKISDEARQDLANTFRCNVSLKLIIKHK 373          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: A0A6P8HTP0_ACTTE (GTPase Era, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HTP0_ACTTE)

HSP 1 Score: 114 bits (284), Expect = 3.040e-25
Identity = 90/302 (29.80%), Postives = 146/302 (48.34%), Query Frame = 1
Query:   31 QVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTL--AAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEV--FLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGKLRYIQKDVEWELRKLFGSRVNVIFDVIVGHK 924
            +V AV+ K HTTR+   G+ T G  QV   DTPG V+  +    + T     A   A+   ++  ++ DA+   T      L   L + L + + +  FL+LNK+D +K K  LL    V+ +         D E++E                        GG +  D+  +FM+SA++GDG++DV  +L  R++PG+W+F  D  T+   + R+ EI RE + +    E+P++IK        R D  + V Q+L   + SQK  +L KL  + K V+ EL  +F  ++++  DV V  K
Sbjct:  113 KVFAVTNKPHTTRQRAQGLFTRGTAQVILLDTPGVVTRSEGRRLKMTREHVTAPENALKEADMIAVVSDAADKRTRH---RLHEQLIETLSNHNHIPSFLILNKIDRLKQKTELLGLVSVLSE---------DREKDEWGYVDK------------------GGWSRFDN--IFMISARSGDGIDDVKKYLSLRAKPGKWMFPPDSNTDLTLQQRIHEIFREKILQLYEHEIPWQIKQVNVLCELRTDGQIRVHQKLYCRKKSQKRCVLEKLELLNKXVQTELENIFSCKIDLSIDVGVSEK 382          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: A0A1E7FBS3_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBS3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.340e-24
Identity = 90/303 (29.70%), Postives = 151/303 (49.83%), Query Frame = 1
Query:   28 SQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGF--VSHQDRDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVD-----DHMT-VFMVSAKTGDGVEDVVDFLVHRSRPGR-WLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGK----LRYIQKDVEWELRKLFGSRVNV 897
            S V+AVS KRHTTR + LG  T+GNTQ+ F DTPGF  + +   +     L A +   +  V+ TLL++D+++ ++     +       +   R +  +VLNKVD VKPK  L                 ID   E  A A   ++            F + GKT+D     +H   VF VSA   DG +D++D L++ + P + W  +  Q+TN  +  ++ EI+RE +++  ++E+P+ ++   R   +     V + Q+L V   S + ++LG     L  I++  + +LRK+F   V++
Sbjct:   97 SPVAAVSRKRHTTRSDILGARTIGNTQIVFKDTPGFMRIENAKEERLDRDLIATAASEMQDVDFTLLVIDSARALSENYRHADDDANPNSNDGRGKFAIVLNKVDLVKPKSTL-----------------IDLAMEIGAIADTCLE----------DHFTEHGKTIDFEAMLEHSPIVFYVSALKEDGTDDLLDHLINLATPCKEWAVQSGQSTNMTELEQVQEIIREKIYRTCHREVPHSVQQVNRMFRKIPKKGVIIHQDLVVFTKSHQKLVLGAGGRTLERIRESAQTDLRKMFKCEVSL 372          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: UPI001CD0B192 (GTPase Era, mitochondrial isoform X2 n=1 Tax=Drosophila mojavensis TaxID=7230 RepID=UPI001CD0B192)

HSP 1 Score: 108 bits (269), Expect = 8.360e-24
Identity = 97/314 (30.89%), Postives = 167/314 (53.18%), Query Frame = 1
Query:   25 ISQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVS-HQDRDDY-QPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEV--FLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMT-VFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSV---SVLQELRVERTSQKPILL-----GKLRYIQKDVEWELRKLFGSRVNVIFDVIVGHKR 927
            + +V   S K HTTR+    ++T G TQ+ F+DTPG V+ H+ R  + + +  +A R AI   ++  ++ DAS + T +   SL   +   LK+ +++   LVLNKVDA+K K  LL+    + +   +           + +A  ++  + P  SV V+L +   +T  +H + VF+VS+ TG G++++ D+LV  ++P RW++  D  T++   T +VE VR  L  +L +E+PY +K +    +   +N V   SVL +    R  +   L+     GKLR I + V  +L ++FG  V++    + G KR
Sbjct:    2 LEKVCPTSGKVHTTRKANTAILTTGQTQLVFYDTPGLVTQHEIRKHHLEQSFKSAYRHAIQHADIIAVMQDASNSWTRK---SLHPTVIDTLKTYAQLPSLLVLNKVDALKSKRVLLDLIKTLTNDTLR-----------SKSAIKKI--SLPSESVGVRLNQR--ETSWNHFSDVFLVSSITGSGLQELQDYLVDCAKPRRWVYPADVYTDETPETLIVESVRARLLDYLPQEIPYNLKCELEYYN--VENRVVYTSVLVQCPTPRIER---LICGESNGKLRQITERVTSDLVEMFGQAVSLTITTMSGGKR 292          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: A0A0G4IRX7_PLABS (Era-type G domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRX7_PLABS)

HSP 1 Score: 109 bits (272), Expect = 2.300e-23
Identity = 90/308 (29.22%), Postives = 143/308 (46.43%), Query Frame = 1
Query:   28 SQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQ----ALKSRSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGK----LRYIQKDVEWELRKLFGSRVNVIFDVIVGHKR 927
            ++VSAVS K +TTR N  GV + G TQ+ F DTPG V   D   Y   +  ++ +AI   ++TL+++DA+K ++N     L  L ++     L   S++ LVLNKVD V+PK +LL  T                          R++   P                      FMVSA   DGV+D+  +L+  S+PG W F  D  T+   + R+ E+VRE ++  + +E+PY+   +T  LSR     V +   + V     + +++G     +++I    + ++  L GS   V   V V   R
Sbjct:  153 NRVSAVSRKSNTTRRNVAGVYSKGLTQLVFLDTPGIVPLADSAKYFREMVTSAWDAIQQADVTLVMIDAAKKISNVEEHLLTELKKKKEGAGLPCGSQLSLVLNKVDLVRPKRKLLPLTA-------------------------RLNEMVP------------------FDKTFMVSAADNDGVDDIKRYLLQSSQPGDWAFPNDAVTDMPIQERICEVVREKMYGRMNQEIPYQALIRTESLSRTPKGLVRLEIAVFVPNERHQQMIVGAKGLTIQWITDRAKQDIEALLGSACIVKIRVRVRTSR 417          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: A0A7Y2CB98_9PROT (GTPase Era n=1 Tax=Marinicaulis sp. TaxID=2174442 RepID=A0A7Y2CB98_9PROT)

HSP 1 Score: 106 bits (264), Expect = 5.960e-23
Identity = 84/302 (27.81%), Postives = 148/302 (49.01%), Query Frame = 1
Query:   28 SQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEVFLVLNKVDAVKPKHRLL--ETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGK----LRYIQKDVEWELRKLFGSRVNVIFDVIV 915
            +++S V+ K  TTR    G++   +TQ+ F DTPG  + + R D    + AA+ + I   + TLL+VDA   +T    G       QA K+R++   +L+ + A + K  L+  +  ++   K   +++ + AE                                +D   +F++SAKTGDG++++   +V  + PG WL+  DQ ++  DR    E+ RE LF  L++ELPY+   +T +  +     + + Q + V R SQK I+LGK    L+ I +    +L +++G+ V++   V V
Sbjct:   32 AKISIVTQKVQTTRARIRGIVVESDTQIVFIDTPGIFAPKRRLDR--AMVAAAWDGIDGADQTLLMVDAPAYITGATGGG------QAAKARADTDSILDGLKAAERKVTLVLNKIDEIARQKLLALIEELSAE--------------------------------NDFAEIFLISAKTGDGLKELKAHIVSNAPPGPWLYPEDQLSDISDRLMAAEVTREKLFLRLHQELPYDSTVETEDW-KSGKKGIRIEQTIYVARDSQKGIVLGKSGQTLKAIGQAAREDLSEIYGAPVHLFLHVKV 292          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: B4KLZ8_DROMO (Era-type G domain-containing protein n=3 Tax=mojavensis species complex TaxID=198037 RepID=B4KLZ8_DROMO)

HSP 1 Score: 107 bits (267), Expect = 6.160e-23
Identity = 97/312 (31.09%), Postives = 166/312 (53.21%), Query Frame = 1
Query:   31 QVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVS-HQDRDDY-QPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEV--FLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMT-VFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSV---SVLQELRVERTSQKPILL-----GKLRYIQKDVEWELRKLFGSRVNVIFDVIVGHKR 927
            +V   S K HTTR+    ++T G TQ+ F+DTPG V+ H+ R  + + +  +A R AI   ++  ++ DAS + T +   SL   +   LK+ +++   LVLNKVDA+K K  LL+    + +   +           + +A  ++  + P  SV V+L +   +T  +H + VF+VS+ TG G++++ D+LV  ++P RW++  D  T++   T +VE VR  L  +L +E+PY +K +    +   +N V   SVL +    R  +   L+     GKLR I + V  +L ++FG  V++    + G KR
Sbjct:   89 KVCPTSGKVHTTRKANTAILTTGQTQLVFYDTPGLVTQHEIRKHHLEQSFKSAYRHAIQHADIIAVMQDASNSWTRK---SLHPTVIDTLKTYAQLPSLLVLNKVDALKSKRVLLDLIKTLTNDTLR-----------SKSAIKKI--SLPSESVGVRLNQR--ETSWNHFSDVFLVSSITGSGLQELQDYLVDCAKPRRWVYPADVYTDETPETLIVESVRARLLDYLPQEIPYNLKCELEYYN--VENRVVYTSVLVQCPTPRIER---LICGESNGKLRQITERVTSDLVEMFGQAVSLTITTMSGGKR 377          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: UPI0009E3CC34 (GTPase Era, mitochondrial-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3CC34)

HSP 1 Score: 105 bits (261), Expect = 4.710e-22
Identity = 94/301 (31.23%), Postives = 148/301 (49.17%), Query Frame = 1
Query:   31 QVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTLA--AASREAIGLVNLTLLLVDASKNVTNRGFG-SLLSLLEQALKSRSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGKLRYIQKDVEWELRKLFGSRVNVIFDVIVGHK 924
            ++ AV+   HTTR  T+GV TVG++Q+   DTPG V+  +    + T     A  +A+   +L  +LVDA+    N+    ++L+ LE  +   S   L+LNK+D VK K  LL+    +M          D E++         D  Y            GG +  +H  VFM+SA+TGDGVE++  +   +S+P  WLF  D  T+Q+    + EI RE L +    E+P++I+ Q   L    +    +  +L   R SQ+  +L KL  ++  V  +L K+ G RV++  DV    K
Sbjct:  110 KICAVTAVPHTTRRQTVGVFTVGDSQIVLLDTPGIVNLPEARRLKMTREHMRAPIDAMHDADLIAVLVDAADRRRNQVIHETILTSLENHVDLPS--ILILNKIDNVKTKSVLLDIVCTLMQ---------DREKD---------DWGYK---------NVGGWSKFEH--VFMISAQTGDGVEEIKQYFAAKSKPSEWLFPADTHTDQNFEQIMQEIFREKLLQLYEHEIPWQIR-QVNVLCEAREGHWRIHHKLYCHRKSQRRCVLEKLDQLRDLVLEDLEKIVGERVDLTVDVSYSEK 378          
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Match: A0A525KPW8_9CAUL (GTPase Era n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A525KPW8_9CAUL)

HSP 1 Score: 103 bits (256), Expect = 7.840e-22
Identity = 97/306 (31.70%), Postives = 142/306 (46.41%), Query Frame = 1
Query:   28 SQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQDRDDYQPTLAA--ASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKSRSEVFLVLNKVDAVKPK-HRLLETTDVIMDKAQQIMDRIDAEREEAAAATNRVDGAYPGGSVKVKLFRDGGKTVDD---HMTVFMVSAKTGDGVEDVVDFLVHRSRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELSRRADNSVSVLQELRVERTSQKPILLGK----LRYIQKDVEWELRKLFGSRVNVIFDVIV 915
            ++VS V+ K  TTR    GV   G+TQV   DTPG    + R D     AA   + +A  +V+L    VDA   +     G+                         KP  HR  E  DV+      I++ + A  ++   A N++DG      +K +   +  K + D   +  VFM+SAKTG GVED+   L  R     W +  DQT +   R    EI RE ++  L++ELPY     T +   RAD SV + Q + V+R SQ+PI+LG     L++I +    EL +LFG +V++   V V
Sbjct:   27 AKVSIVTQKVQTTRFPVRGVAIAGDTQVVLVDTPGIFQPRRRLDRAMIRAAWGGAEDADAVVHL----VDAPAELAAAQPGA-------------------------KPADHRSAE--DVV-----SIVEGLKAHGKQVILALNKIDG------MKRETLLELSKRLFDTGVYSDVFMISAKTGAGVEDLKRTLAERMPENPWFYPEDQTADLPARLMAAEITREKIYLRLHEELPYAATVDTTKFEERADGSVRIEQTISVQRESQRPIVLGAGGQTLKWIGQKSREELTELFGQKVHLFLHVQV 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125917.1931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBN0_ECTSI4.930e-14269.35MEra, mitochondrial Era GTPase n=2 Tax=Ectocarpus ... [more]
UPI000C6CBB981.270e-2530.03GTPase Era, mitochondrial-like n=1 Tax=Centruroide... [more]
A0A6P8HTP0_ACTTE3.040e-2529.80GTPase Era, mitochondrial-like n=1 Tax=Actinia ten... [more]
A0A1E7FBS3_9STRA2.340e-2429.70p-loop containing nucleoside triphosphate hydrolas... [more]
UPI001CD0B1928.360e-2430.89GTPase Era, mitochondrial isoform X2 n=1 Tax=Droso... [more]
A0A0G4IRX7_PLABS2.300e-2329.22Era-type G domain-containing protein n=1 Tax=Plasm... [more]
A0A7Y2CB98_9PROT5.960e-2327.81GTPase Era n=1 Tax=Marinicaulis sp. TaxID=2174442 ... [more]
B4KLZ8_DROMO6.160e-2331.09Era-type G domain-containing protein n=3 Tax=mojav... [more]
UPI0009E3CC344.710e-2231.23GTPase Era, mitochondrial-like n=1 Tax=Orbicella f... [more]
A0A525KPW8_9CAUL7.840e-2231.70GTPase Era n=1 Tax=Phenylobacterium sp. TaxID=1871... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig125917contigH-elongata_contig125917:311..1531 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.0
Seed ortholog evalue4.8e-115
Seed eggNOG ortholog2880.D8LBN0
Preferred nameERAL1
KEGG rclassRC00005
KEGG koko:K03595,ko:K10747
KEGG ReactionR00381,R00382,R10822,R10823
KEGG Pathwayko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
GOsGO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0019866,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043021,GO:0043024,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0065003,GO:0070013,GO:0070125,GO:0070126,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.GTP binding
EggNOG OGsCOG1159@1,KOG1423@2759
EC6.5.1.1,6.5.1.6,6.5.1.7
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03029,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMEra, mitochondrial Era GTPase
Ec32 orthologEc-27_003360.1
Exons2
Model size933
Cds size933
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929745.0728142-CDS-H-elongata_contig125917:310..5031622929745.0728142-CDS-H-elongata_contig125917:310..503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig125917 311..503 -
1691679140.9859598-CDS-H-elongata_contig125917:310..5031691679140.9859598-CDS-H-elongata_contig125917:310..503Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig125917 311..503 -
1622929745.089087-CDS-H-elongata_contig125917:791..15311622929745.089087-CDS-H-elongata_contig125917:791..1531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig125917 792..1531 -
1691679140.997906-CDS-H-elongata_contig125917:791..15311691679140.997906-CDS-H-elongata_contig125917:791..1531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig125917 792..1531 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig125917.1931.1prot_H-elongata_contig125917.1931.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig125917 311..1531 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig125917.1931.1

>prot_H-elongata_contig125917.1931.1 ID=prot_H-elongata_contig125917.1931.1|Name=mRNA_H-elongata_contig125917.1931.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
MILWPHVRISQVSAVSTKRHTTRENTLGVMTVGNTQVFFHDTPGFVSHQD
RDDYQPTLAAASREAIGLVNLTLLLVDASKNVTNRGFGSLLSLLEQALKS
RSEVFLVLNKVDAVKPKHRLLETTDVIMDKAQQIMDRIDAEREEAAAATN
RVDGAYPGGSVKVKLFRDGGKTVDDHMTVFMVSAKTGDGVEDVVDFLVHR
SRPGRWLFRRDQTTNQDDRTRLVEIVREGLFKHLYKELPYEIKTQTRELS
RRADNSVSVLQELRVERTSQKPILLGKLRYIQKDVEWELRKLFGSRVNVI
FDVIVGHKRA*
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mRNA from alignment at H-elongata_contig125917:311..1531-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig125917.1931.1 ID=mRNA_H-elongata_contig125917.1931.1|Name=mRNA_H-elongata_contig125917.1931.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1221bp|location=Sequence derived from alignment at H-elongata_contig125917:311..1531- (Himanthalia elongata Himel1 dioecious)
ATGATTTTATGGCCACACGTCCGTATATCCCAGGTATCTGCTGTCTCAAC GAAGAGGCACACAACACGGGAGAACACCCTGGGTGTCATGACCGTCGGGA ACACGCAAGTCTTCTTCCACGACACCCCAGGATTCGTCAGCCACCAGGAC CGCGACGACTATCAGCCCACCCTCGCCGCTGCATCACGAGAAGCCATCGG GCTTGTAAACCTGACCCTCCTCCTTGTGGACGCTTCGAAGAACGTGACCA ACCGAGGGTTTGGGAGCCTACTTTCGTTGCTCGAACAGGCCCTGAAGTCT AGGTCCGAGGTGTTCCTCGTGCTCAACAAGGTTGACGCCGTAAAGCCCAA GCACCGCCTGCTTGAGACGACGGACGTGATCATGGATAAGGCACAGCAAA TCATGGATCGAATAGACGCGGAGCGAGAGGAAGCCGCGGCCGCGACGAAT CGGGTGGATGGGGCTTATCCTGGAGGCAGTGTGAAGGTCAAACTGTTCCG CGACGGGGGGAAAACGGTTGACGATCACATGACGGTCTTTATGGTGTCAG CCAAGACGGGTGATGGGGTGGAGGACGTCGTCGATTTTCTGGTGCACCGT TCGAGACCAGGGAGGTGGCTGTTCCGGCGTGATCAAACGACCAACCAAGA CGATAGAACCCGGCTGGTGGAGATCGTCAGAGAGGGTCTCTTCAAGCACC TCTATAAAGAGCTTCCCTACGAAATCAAGACGCAGACAAGGTATCATGCG TGGCTTGCAATCATGGTCATATCGTGCTTTTGCCTTGACACGCCATGTTC CGACTGTCTAGAGGAATCGTCAGCCGGAAACAAACGTCGTTATGCTCTTC ATGAACTAGGGCGCACATTAAAAGGTTGCATGAAAATAATGTCATAATGC CATGTAGACAGCAACACACTTGAATCGAGCTATTTTGCACACGTTTAAAA ATTGACCATGGTGGACAGGGGACACACACCATTTTGTTCGAGACACCTGA TAGGGGGTTTTCTTCTTGTTTGCCGCAGGGAGCTATCTCGAAGGGCCGAT AACAGCGTGTCGGTGCTGCAAGAATTACGAGTGGAGAGGACTTCGCAGAA GCCAATATTATTGGGCAAGCTACGCTACATTCAGAAGGATGTTGAATGGG AGCTTCGCAAGCTCTTCGGCTCCCGGGTCAATGTAATTTTCGACGTTATT GTGGGCCACAAGAGAGCCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig125917:311..1531-

>mRNA_H-elongata_contig125917.1931.1 ID=mRNA_H-elongata_contig125917.1931.1|Name=mRNA_H-elongata_contig125917.1931.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1866bp|location=Sequence derived from alignment at H-elongata_contig125917:311..1531- (Himanthalia elongata Himel1 dioecious)
ATGATTTTATGGCCACACGTCCGTATATCCCAGGTATCTGCTGTCTCAAC
GAAGAGGCACACAACACGGGAGAACACCCTGGGTGTCATGACCGTCGGGA
ACACGCAAGTCTTCTTCCACGACACCCCAGGATTCGTCAGCCACCAGGAC
CGCGACGACTATCAGCCCACCCTCGCCGCTGCATCACGAGAAGCCATCGG
GCTTGTAAACCTGACCCTCCTCCTTGTGGACGCTTCGAAGAACGTGACCA
ACCGAGGGTTTGGGAGCCTACTTTCGTTGCTCGAACAGGCCCTGAAGTCT
AGGTCCGAGGTGTTCCTCGTGCTCAACAAGGTTGACGCCGTAAAGCCCAA
GCACCGCCTGCTTGAGACGACGGACGTGATCATGGATAAGGCACAGCAAA
TCATGGATCGAATAGACGCGGAGCGAGAGGAAGCCGCGGCCGCGACGAAT
CGGGTGGATGGGGCTTATCCTGGAGGCAGTGTGAAGGTCAAACTGTTCCG
CGACGGGGGGAAAACGGTTGACGATCACATGACGGTCTTTATGGTGTCAG
CCAAGACGGGTGATGGGGTGGAGGACGTCGTCGATTTTCTGGTGCACCGT
TCGAGACCAGGGAGGTGGCTGTTCCGGCGTGATCAAACGACCAACCAAGA
CGATAGAACCCGGCTGGTGGAGATCGTCAGAGAGGGTCTCTTCAAGCACC
TCTATAAAGAGCTTCCCTACGAAATCAAGACGCAGACAAGATGATTTTAT
GGCCACACGTCCGTATATCCCAGGTATCTGCTGTCTCAACGAAGAGGCAC
ACAACACGGGAGAACACCCTGGGTGTCATGACCGTCGGGAACACGCAAGT
CTTCTTCCACGACACCCCAGGATTCGTCAGCCACCAGGACCGCGACGACT
ATCAGCCCACCCTCGCCGCTGCATCACGAGAAGCCATCGGGCTTGTAAAC
CTGACCCTCCTCCTTGTGGACGCTTCGAAGAACGTGACCAACCGAGGGTT
TGGGAGCCTACTTTCGTTGCTCGAACAGGCCCTGAAGTCTAGGTCCGAGG
TGTTCCTCGTGCTCAACAAGGTTGACGCCGTAAAGCCCAAGCACCGCCTG
CTTGAGACGACGGACGTGATCATGGATAAGGCACAGCAAATCATGGATCG
AATAGACGCGGAGCGAGAGGAAGCCGCGGCCGCGACGAATCGGGTGGATG
GGGCTTATCCTGGAGGCAGTGTGAAGGTCAAACTGTTCCGCGACGGGGGG
AAAACGGTTGACGATCACATGACGGTCTTTATGGTGTCAGCCAAGACGGG
TGATGGGGTGGAGGACGTCGTCGATTTTCTGGTGCACCGTTCGAGACCAG
GGAGGTGGCTGTTCCGGCGTGATCAAACGACCAACCAAGACGATAGAACC
CGGCTGGTGGAGATCGTCAGAGAGGGTCTCTTCAAGCACCTCTATAAAGA
GCTTCCCTACGAAATCAAGACGCAGACAAGGGAGCTATCTCGAAGGGCCG
ATAACAGCGTGTCGGTGCTGCAAGAATTACGAGTGGAGAGGACTTCGCAG
AAGCCAATATTATTGGGCAAGCTACGCTACATTCAGAAGGATGTTGAATG
GGAGCTTCGCAAGCTCTTCGGCTCCCGGGTCAATGTAATTTTCGACGTTA
TTGTGGGCCACAAGAGAGCCTAGGGAGCTATCTCGAAGGGCCGATAACAG
CGTGTCGGTGCTGCAAGAATTACGAGTGGAGAGGACTTCGCAGAAGCCAA
TATTATTGGGCAAGCTACGCTACATTCAGAAGGATGTTGAATGGGAGCTT
CGCAAGCTCTTCGGCTCCCGGGTCAATGTAATTTTCGACGTTATTGTGGG
CCACAAGAGAGCCTAG
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