mRNA_H-elongata_contig12518.1893.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12518.1893.1
Unique NamemRNA_H-elongata_contig12518.1893.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 3.590e-174
Identity = 296/614 (48.21%), Postives = 386/614 (62.87%), Query Frame = 1
Query:    1 KKCCGMSAASHGQEKMGRCAVCKDFYRKVLISRAIQAVKEGPYKNTANEHLSMPQKTIVLVAPIHFKLYHPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQY--MYFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQATWST---L*KFETWWKGEAEEPFSDFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSLGK*LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAKVVSATTIARIREF---QETQKE-PDGPLESYEALA-----FILYSERNYGRTNYEKRVRLNKWKSYVRSAESVVLGRLMESSAFFDE*HETLEQRKSEGEGAELDWAKHFITHKS 1800
            K C G++    G   + RC  C+ F R+ L  R   A K    K++ N +++  QK  V +     ++  PR    K++  A  L  E     RL+ R+V  R+EC+    EQG  LH  L+  E+K V   +LP+ S QR  YEDQV+WNTS+GKAKGFRFHP T+R+AIYI G A +AAYNMLR  LHLPSP R+KQL+R  A   + VL    E +LKYG+LAA  +ADK DLMG+LTWDLMHL+KNGF FAP  GG  GL+DETTFFNP+Y+ +     ++E  L++I+ATQY  M+FVS+G+PE+KFV WREA   L TDYIQRML++ MR L +AHPDKAFDVI T  DGA E  ++ T   +  F  W KG  E  F+ FKVG LHPVHL+  FNMSDPM++LKK+VNAL HSDI  K+  LG        E++F + SLKTA+RVYN +EYD   ++  E+ A L  +       + +T  +CMNV L AKVVS T +  IRE    QET+ E PD  L  YE LA     F+     +YGRT +E+R ++NK K YV SAE  +L RLME   +FD+ ++ L++      G ++ W KHFIT  S
Sbjct:  304 KGCVGVATPFQGLNSVPRCQGCRGFVREALRPRLQNASKAESLKSSKNIYMTRAQKVDVTIVSAPQRV--PRITS-KLWSTAADLNRERTTTARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLT---ENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS 911          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 1.330e-157
Identity = 269/540 (49.81%), Postives = 346/540 (64.07%), Query Frame = 1
Query:    1 KKCCGMSAASHGQEKMGRCAVCKDFYRKVLISRAIQAVKEGPYKNTANEHLSMPQK---TIVLVAPIHFKLYHPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQY--MYFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQATWST---L*KFETWWKGEAEEPFSDFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSLGK*LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAKVVSATTIARIREF---QETQKE-PDGPLESYEALAFIL 1584
            K C G++    G   + RC  C+ F R+ L  R   A K    K++ N +++  QK   TIVL AP          +D K++  A +L  E  A +RL+ R+V  R+EC+    EQG  LH  L+  E+K V   +LP+ S QR  YEDQV+WNTS+GKAKGFRFHP T+R+AIYI G A +AAYNMLR  LHLPSP R+KQL+R  A   + VL    E +LKYG+LAA  +ADK DLMG+LTWDLMHL+KNGF FAP  GG  GL+DET FFNP+Y+ +     ++E  L++I+ATQY  M+FVS+G+PE+KFV WREA   L TDYIQRML++ MR L +AHPDKAFDV+ T+ DGA E  ++ T   +  F  W KG  E  F+ FKVG LHPVHL+  FNMSDPM++LKK+VNAL HSDI  K+  LG        E++F + SLKTA+RVYN +EYD   ++  E+ A L  +       + +T  +CMNV L AKVVS T +  IRE    QET+ E PD  L  YE LA  L
Sbjct:  399 KGCVGVATPFQGLNSVPRCQGCRGFVREALRPRLENASKAESLKSSKNIYMTSAQKVDETIVL-AP---------QRDHKLWSTAASLNRERNATVRLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLT---ENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHL 925          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 2.440e-126
Identity = 232/493 (47.06%), Postives = 295/493 (59.84%), Query Frame = 1
Query:  208 HPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQY--MYFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQ--------ATWSTL*K--------------------------FET---------WWKGEAEEPFSDFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSLGK*LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAKVVSATTIARIREFQ---ETQKEP 1542
            +P    R   V  E L    +   +L+T  VD  RE     +     L + ++S   + V  K LP    Q     DQV+WNTS+GKAKGFRFHP T+R+AIYI G A +AAYNML   LHLPSP R+KQL+R  A   + VL    E +LK G+LAA  + DKADLMG+L WDLMHL+KNGF FAP  GG  GL+DETTFFNP+Y+ +     ++E  L++I+ATQY  MYFVS+G+PE+KFV WREA   L TD+IQRML++ MR L +AHPDKAFDVI TV DGA  Q        A W TL +                          F+T         W KG  E  F+ FKVGILHPVHL+  FNMSDPM++LKK+VNAL HSDI  K+  LG        E++F + SLKTA+RVYN +EYD + ++  E+ A L  +     + + +T  +CMNV L AKVVS T +  IRE +   ET+ EP
Sbjct:  238 NPTLXGRVQDVQQEHLHDSAQKDHKLRTTAVDLNRE-----RNATTLLRERIVSMREECVHNKTLPLPCAQ-----DQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLT---ENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEP 717          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 9.260e-111
Identity = 172/272 (63.24%), Postives = 206/272 (75.74%), Query Frame = 1
Query:  262 ENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQYM-YFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQ 1074
            + E  IRL+ RV+ AR+E    N +QGA LH+LLL  ES+ +F+KKLP+DS QRA++EDQ+RWNT    +KGFRFHP TLRIAIY+HG A SA YNMLR F+HLPSP RV+QLQ Q A   + VL    + + KYGRLAA  +ADKADL G+L+WDL HLSKNG  FAP  G + GL+DE TFFNPVYQGK+D DG + KQL +ILATQY+ +FVSLG PE+KFV WREA   L TDYIQRML +TMR L +AH DK FDV+ TV DGASEQ
Sbjct:    6 QKEGKIRLQDRVLAARKESERINDQQGAALHELLLDPESRTIFEKKLPEDSAQRAIFEDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLV---DNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVEFFVSLGNPEYKFVVWREAVRSLSTDYIQRMLTRTMRFLSIAHRDKGFDVVATVCDGASEQ 274          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 2.930e-73
Identity = 135/292 (46.23%), Postives = 178/292 (60.96%), Query Frame = 1
Query:    1 KKCCGMSAASHGQEKMGRCAVCKDFYRKVLISRAIQAVKEGPYKNTANEHLSMPQKTIVLVAPIHFKLYHPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRI 876
            K C G++    G   + RC  C+DF R+ L  R   A K    K++ N +++  QK                  D K++  A  L  E  A  RL+ R+V  R+EC+    EQG  LH  L+  E+K V   +LP+ S QR  YEDQV+WNTS+GKAKGFRFHP T+R+AIYI G A +AAYNML   LHLPSP R+KQL+R  A   + VL    E +LKYG+LAA  +ADK DLMG+LTWDLMHL+K+GF F P  GG  GL+DETTFFNP+Y+ +     ++E  L+++
Sbjct:  277 KGCVGVATPFQGLNSVPRCQGCRDFVREALRPRLENASKAESLKSSKNLYMTSAQK------------------DHKLWSTAADLNRERNATARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLT---ENILKYGKLAATQDADKVDLMGVLTWDLMHLNKSGFSFTPNGGGFTGLVDETTFFNPIYKHEGGVVREVEPTLEKL 547          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 3.050e-63
Identity = 190/569 (33.39%), Postives = 280/569 (49.21%), Query Frame = 1
Query:  223 DRKMFVLAEALRVENEAMIRLKTRVVDARRECMLF--NKEQGAKLHDLLLST-ESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKA--------------------DLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFN---PVYQGKLDNDGDIEKQLDRILATQYM--YFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQATWS---TL*KFETWWKGEA--EEPFSDFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSLGK*----LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAKVVSATTIARIREFQ----ETQKEPDGPLESYEALAFIL--YSERNYGRTNYEKRVRLN---KWKSYVRSAESVVLGRLMESSAFFDE*HETLEQRKSEGEGAELDWAKHFIT 1791
            D K+   ++  RV  + +  ++ ++   R + ++   + EQG +LH+ L    + K VF + LP+ S  RA+ E+ +R+N   G AKG+RF+   LR A Y       A Y +LR  LHLP    +K +Q+  A   S  +      +  + ++A   N   +                    DL+GIL WDLMHL++N F   P  GGI GL+D  +FF       QG +D    +EK L+  +ATQY+  ++VS+G P++KF  +REA  GL    I RML +   +L  AH DK FDVIGTV DGA+E  ++        F  W K ++  E+   D+ V   HP H    FNMSDP+++LKKVVNAL +S +  K   L       L DA  E+  F  SLKT ++ +   E   ++ +  E+ A LR +     A   +  H+CM+V L AK VS T +  I   Q       K P G L  Y  +A ++  + +   G  N  ++ R +   K + Y+  A+   L RL+E   FFD     L  R + G      WA HFIT
Sbjct:  199 DAKLDAQSKGTRVLRDHIRHMEVQLRRCREDDVVIAADNEQGRRLHETLSGNPDVKDVFAR-LPEGSLARAVVEEMMRYNQHRGSAKGWRFNAKVLRWACYALAKMGGAGYQVLRDVLHLP---HIKHVQKIVAASTSTKMGEQYHLIEAFAKMACEDNXSTSRYVELFWFYSLLWRPYGLVFDLLGILVWDLMHLNQNDFRVCPNGGGIEGLVDRDSFFRHPLDAVQG-VDEHITLEKTLETFVATQYLEVFWVSIGNPKYKFCVYREAVRGLSGPKISRMLDEITNKLYEAHEDKKFDVIGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAP-ELASF--SLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNGVFNVLEQDRAHPQRKKEGYITGADCPPLTRLLEVLQFFDSWQSNL--RHTFGGK----WAPHFIT 753          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 7.580e-48
Identity = 119/298 (39.93%), Postives = 155/298 (52.01%), Query Frame = 1
Query:    4 KCCGMSAASHGQEK-MGRCAVCKDFYRKVLISRAIQAVKEGPYKNTANEHLSMPQKTIVLVAPIHFKLYHPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRECMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTAHQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFAPTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQYM 894
            K CG  A++HG+   + RC  CK+F+RK +     Q VK  P+ NT  E LS  QK                    KM  LA    +E++                  F +E             + +  +   P +  Q   +E   R + S G A    F         Y+HG A SA YNMLR F+HLPSP RV++L+ Q A   + VL    + + KYGRLAA  +ADKADL G+L+WDL HLSKNGF FAP  GG  GL+DE TFFNPVYQ K+D DGD++KQLD+ILAT+Y+
Sbjct:   40 KACGWLASNHGESGGVARCGECKEFFRKSVQKLLAQTVKSDPHSNTKTESLSTVQK--------------------KMHALA----MEDD------------------FREETSG-------GQRTTSNLRGPTPMEH-QDGEFE---RVSISPGDAANRHF---------YMHGVAGSAGYNMLRNFIHLPSPRRVQRLEAQAAPPRTGVLV---DNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYV 272          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 6.400e-35
Identity = 87/206 (42.23%), Postives = 117/206 (56.80%), Query Frame = 1
Query:  883 TQYMYFVSLGRPEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGASEQATWSTL*K---FETWWKGEA--EEPFSDFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSLGK*-LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAK 1482
            T  +++VSLG P +KF  +REA  GL    + RML   M  L  AH DK FDVIGTV DGA+E  ++        F  W +G++  E+   DFKV   HP H    FNMSDP+++LKKVVNAL HSDI  K+  L K    +A+ +  +   SLKT ++V+   E  G   S+ EQ A L  +    P M+ +  H+CM+V L AK
Sbjct:   56 TTKVFWVSLGNPTYKFCVFREAVRGLTGPKLARMLDDIMTSLYQAHSDKNFDVIGTVCDGAAEHRSFQKYLAEIAFSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.130e-15
Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 1141 DFKVGILHPVHLNVAFNMSDPMYVLKKVVNAL*HSDISQKRWSL-GK*LADASGEMRFFKLSLKTAKRVYNAIEYDGSDLSINEQLALLRTYRYHTPAMWRKTQHSCMNVSLFAKVVSATT 1500
            DFKV   HP H    FNMS+P+++LKKVVNAL HS ++ K+  L G      + E  +   SLKT + V+N  E  G   S  EQ A L  +R   P M+ +  H+CM+V L AKV    T
Sbjct:    5 DFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKVGECAT 125          
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Match: A0A6H5KCN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.950e-14
Identity = 33/51 (64.71%), Postives = 44/51 (86.27%), Query Frame = 1
Query:  433 EDQVRWNTSNGKAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPS 585
            +DQVRWNT  GK +GFR+HP TLRIA+Y+HG A +AAYN++R ++HLPSP+
Sbjct:  139 KDQVRWNTKEGKERGFRYHPQTLRIALYLHGMAGTAAYNLVRQYVHLPSPT 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12518.1893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FZI2_ECTSI3.590e-17448.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVF4_9PHAE1.330e-15749.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5M0_9PHAE2.440e-12647.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5R1_ECTSI9.260e-11163.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2I2_ECTSI2.930e-7346.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFP1_9PHAE3.050e-6333.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM8_ECTSI7.580e-4839.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LK65_ECTSI6.400e-3542.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYD6_9PHAE2.130e-1542.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCN5_9PHAE1.950e-1464.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12518contigH-elongata_contig12518:5132..8374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_008800.1
Exons10
Model size1800
Cds size1080
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12518.1893.1prot_H-elongata_contig12518.1893.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12518 5147..7337 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929739.4760356-UTR-H-elongata_contig12518:5131..51461622929739.4760356-UTR-H-elongata_contig12518:5131..5146Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 5132..5146 +
1691679139.2007818-UTR-H-elongata_contig12518:5131..51461691679139.2007818-UTR-H-elongata_contig12518:5131..5146Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 5132..5146 +
1622929739.708547-UTR-H-elongata_contig12518:7337..77241622929739.708547-UTR-H-elongata_contig12518:7337..7724Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 7338..7724 +
1691679139.2936864-UTR-H-elongata_contig12518:7337..77241691679139.2936864-UTR-H-elongata_contig12518:7337..7724Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 7338..7724 +
1622929739.7212784-UTR-H-elongata_contig12518:7894..80061622929739.7212784-UTR-H-elongata_contig12518:7894..8006Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 7895..8006 +
1691679139.301433-UTR-H-elongata_contig12518:7894..80061691679139.301433-UTR-H-elongata_contig12518:7894..8006Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 7895..8006 +
1622929739.7334876-UTR-H-elongata_contig12518:8168..83741622929739.7334876-UTR-H-elongata_contig12518:8168..8374Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 8169..8374 +
1691679139.3095834-UTR-H-elongata_contig12518:8168..83741691679139.3095834-UTR-H-elongata_contig12518:8168..8374Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12518 8169..8374 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929739.4940894-CDS-H-elongata_contig12518:5146..52991622929739.4940894-CDS-H-elongata_contig12518:5146..5299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5147..5299 +
1691679139.2179155-CDS-H-elongata_contig12518:5146..52991691679139.2179155-CDS-H-elongata_contig12518:5146..5299Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5147..5299 +
1622929739.5441267-CDS-H-elongata_contig12518:5432..56991622929739.5441267-CDS-H-elongata_contig12518:5432..5699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5433..5699 +
1691679139.2289786-CDS-H-elongata_contig12518:5432..56991691679139.2289786-CDS-H-elongata_contig12518:5432..5699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5433..5699 +
1622929739.5622673-CDS-H-elongata_contig12518:5989..61941622929739.5622673-CDS-H-elongata_contig12518:5989..6194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5990..6194 +
1691679139.2375882-CDS-H-elongata_contig12518:5989..61941691679139.2375882-CDS-H-elongata_contig12518:5989..6194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 5990..6194 +
1622929739.5823536-CDS-H-elongata_contig12518:6384..64041622929739.5823536-CDS-H-elongata_contig12518:6384..6404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6385..6404 +
1691679139.2455623-CDS-H-elongata_contig12518:6384..64041691679139.2455623-CDS-H-elongata_contig12518:6384..6404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6385..6404 +
1622929739.6239488-CDS-H-elongata_contig12518:6432..66631622929739.6239488-CDS-H-elongata_contig12518:6432..6663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6433..6663 +
1691679139.2536738-CDS-H-elongata_contig12518:6432..66631691679139.2536738-CDS-H-elongata_contig12518:6432..6663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6433..6663 +
1622929739.6418068-CDS-H-elongata_contig12518:6883..70651622929739.6418068-CDS-H-elongata_contig12518:6883..7065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6884..7065 +
1691679139.2684174-CDS-H-elongata_contig12518:6883..70651691679139.2684174-CDS-H-elongata_contig12518:6883..7065Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 6884..7065 +
1622929739.6803844-CDS-H-elongata_contig12518:7201..72211622929739.6803844-CDS-H-elongata_contig12518:7201..7221Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 7202..7221 +
1691679139.2759721-CDS-H-elongata_contig12518:7201..72211691679139.2759721-CDS-H-elongata_contig12518:7201..7221Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 7202..7221 +
1622929739.6923707-CDS-H-elongata_contig12518:7335..73371622929739.6923707-CDS-H-elongata_contig12518:7335..7337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 7336..7337 +
1691679139.2859073-CDS-H-elongata_contig12518:7335..73371691679139.2859073-CDS-H-elongata_contig12518:7335..7337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12518 7336..7337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12518.1893.1

>prot_H-elongata_contig12518.1893.1 ID=prot_H-elongata_contig12518.1893.1|Name=mRNA_H-elongata_contig12518.1893.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=360bp
MSAASHGQEKMGRCAVCKDFYRKVLISRAIQAVKEGPYKNTANEHLSMPQ
KTIVLVAPIHFKLYHPRSQDRKMFVLAEALRVENEAMIRLKTRVVDARRE
CMLFNKEQGAKLHDLLLSTESKAVFKKKLPKDSTQRALYEDQVRWNTSNG
KAKGFRFHPGTLRIAIYIHGCADSAAYNMLRTFLHLPSPSRVKQLQRQTA
HQLSEVLKALGECVLKYGRLAAALNADKADLMGILTWDLMHLSKNGFGFA
PTTGGIIGLIDETTFFNPVYQGKLDNDGDIEKQLDRILATQYMYFVSLGR
PEFKFVAWREATHGLGTDYIQRMLMKTMRQLVLAHPDKAFDVIGTVSDGA
SEQATWSTL*
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mRNA from alignment at H-elongata_contig12518:5132..8374+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12518.1893.1 ID=mRNA_H-elongata_contig12518.1893.1|Name=mRNA_H-elongata_contig12518.1893.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3243bp|location=Sequence derived from alignment at H-elongata_contig12518:5132..8374+ (Himanthalia elongata Himel1 dioecious)
AAAAAGTGTTGTGGTATGTCAGCCGCATCTCACGGTCAGGAGAAGATGGG GCGATGTGCGGTGTGTAAAGATTTCTATCGCAAGGTGTTAATCTCGAGAG CGATTCAAGCGGTGAAGGAGGGGCCATACAAGAACACTGCTAACGAGCAC TTGAGCATGCCGCAAAAGGTATTATATCATCGAAAGTCGTAGGATGTCAT CCTTTATTCCCTTCTTGGAATTACACGCGAGTCTCGGACGTTGTCATGAT GAGGTTTTAGTATTGGACGAGTTAGCATGAACCCATAAATTACTTAAGGA GACAATCGTTTTGGTGGCACCAATCCACTTCAAACTTTATCATCCCCGGT CACAGGATAGAAAGATGTTCGTCTTGGCGGAGGCGTTGCGAGTGGAGAAC GAGGCAATGATCCGATTGAAGACACGTGTTGTGGATGCACGACGAGAATG CATGCTGTTTAATAAAGAGCAAGGAGCGAAGCTCCACGACCTCTTGCTGT CTACCGAATCCAAGGCGGTGTTTAAGAAGAAGCTCCCAAAAGACAGCACC CAGCGAGCGCTATACGAGGTACATGTTTAGATCTTGTGCACATTTGACGT TTGATCGTGTGTCAAGTTTGTGCGTCGGGATCAAGTATTGTATATGTTCC ACGTTGTAACTCGTTGTGCGTACTTCTGTGGGAGGTGCTTGTATGATGAT ATATTTTTTCACCCGATGCCATACATTTTAGTTTACATTGGCTGATGTTT TATCACGCTATGTCATCTTCACCACCCATTTCAATTCCGTAATATGGACA GATCTTCATTTGACCACGTCTTCTTGAGCACTATTTGTTCTTATACATAT ATCTCCAGGACCAGGTCAGATGGAACACGAGCAACGGGAAAGCGAAGGGG TTCAGGTTCCACCCGGGAACACTCAGAATTGCAATCTACATACATGGGTG CGCTGACTCCGCGGCGTACAACATGTTGAGAACCTTCCTTCACTTGCCAA GCCCTTCCCGCGTCAAACAGTTGCAGCGTCAGACAGCACATCAACTGTCT GAGGTATTGAAAGGTAGTTGGTAGGTCTCATGACGTCTTAGTCTCATGTG GAACCTCTTTTGTCTGAAAATAGACAGTCGTGCGCGCTCTAGTTTGCTTT TCAGAGCCCTCCGACAGGTAGTCCATTCAACTGGAATTCTAGCTCGCCAC CCGCTTTAGCCAGCCTTACACCCGCGCATGTGAGTGTTCGTTTTTGTTAT TAGCATTGGGCGAATGCGTTCTTGTATACCTATGCTTCAACTTTTTCTCA GAAATATGGCAGGTTGGCCGCCGCATTAAACGCCGATAAGGCCGATCTCA TGGGGATTTTGACCTGGGACCTGATGCACCTAAGCAAGAACGGCTTCGGC TTCGCTCCGACTACGGGGGGCATCATAGGTTTGATAGACGAGACGACGTT TTTCAATCCAGTCTACCAAGGGAAACTGGACAACGACGGAGACATAGAGA AGCAGCTGGACAGGATACTAGCGACTCAATACGTGGAGTTTTTTTTTTTT TGTATCCCAGAGGAAGGTAACACTTTGACCGAAGCCAAGGTGTATGTTGT TAATCAAGCGTGGGTGGGAATATTGTCAACTCGTCCACCACGACGCGGAA TATTTCCGCTCATAATATTCAATGTCCATTACGCTCCCCCATCTTCCGTA GAGGTCCTCCTGTCATCCTCTTTCGCCGCTCCTGGTATCGTTCCATATAC AGATGTACTTCGTCAGCTTGGGCAGACCAGAGTTCAAGTTCGTCGCGTGG CGGGAGGCAACGCATGGTCTCGGCACGGATTATATCCAGCGAATGCTGAT GAAGACCATGCGTCAACTTGTATTAGCACACCCTGACAAGGCGTTCGACG TCATCGGCACCGTCTCAGACGGGGCATCCGAACAGTAAGATACGATTGTT CCTATTGTAACGTTTTTTCACTACCAACGCTTATTCAGGCAATATAGGTA ATCTTTAACATAATAATATGCGAATATCTCATATTGATACTACCCTGTAC ATGGATGGATGTGACGCGAGGGCGACTTGGTCAACGTTATGTCGGTAACC AACAACCTGCCCATCCACCCCCCTCCCCTCCACATGTACCTTTCCTGGAT GTGTGATTCTTCGGTTTGTAAAAATCCGCTCTTTCCAAACCCGCGCAGCA ACAGAGAAGTTCGAAACATGGTGGAAGGGGGAGGCAGAGGAGCCGTTCTC GGACTTTAAGGTCGGCATCCTACACCCTGTACACCTAAACGTCGCCTTCA ATATGTCGGACCCAATGTATGTGTTGAAGAAGGTAGTCAACGCCTTATGA CACAGCGATATTTCGCAGAAGCGGTGGTCGCTGGGGAAGTGACTTGCAGA TGCATCCGGGGAGATGAGGTTCTTCAAATTATCGCTGAAGACGGCCAAAC GCGTATACAACGCTATCGAGTATGATGGATCTGACCTGTCGATAAACGAG CAGTTGGCCTTGCTCCGCACTTACCGCTACCACACACCGGCGATGTGGCG GAAAACACAACACTCGTGCATGAACGTCTCGCTATTTGCTAAGGTGAGAC TGGGTGTGGTATAGCGACATATTTTTCGGCATCATCGGAACTGTGGTGGG ATACTGTTCATGTCGGTAAACAATGTAGCGTGGAGAGTAACCCTGGCTGA TACAGTCCCGTAGTTGTCATAATGTTTGTTTACCCCTCTTCTCCTCATCA TTGTATAACCCAGGTGGTATCGGCCACGACCATCGCAAGAATCCGGGAGT TTCAAGAGACACAGAAGGAGCCTGACGGGCCGCTGGAGTCTTATGAGGCG CTAGCATTCATACTTTACTCTGAAAGTGTTACTATTACTCTGAAAGTGTT ACCTTTTCGGATCCGCCCTTGACACTACCAACACGTTGTATTGTAACCTG GTATGTGTTTTTGTGATCTTCCACAGGGATGCGACTTGGAGTGTCATGAT ATTGTTCTCGTGACGCCCCGCATATGAAAAACGCAAGGAAACTACGGTCG AACCAATTACGAGAAGCGTGTGCGGTTGAATAAGTGGAAGAGCTACGTCA GGTCAGCGGAATCAGTCGTCTTGGGCCGACTTATGGAGAGCTCGGCATTC TTCGACGAATGACACGAAACCCTTGAGCAAAGAAAGTCCGAAGGGGAAGG GGCCGAGCTGGACTGGGCGAAGCACTTCATCACGCACAAGTCG
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Coding sequence (CDS) from alignment at H-elongata_contig12518:5132..8374+

>mRNA_H-elongata_contig12518.1893.1 ID=mRNA_H-elongata_contig12518.1893.1|Name=mRNA_H-elongata_contig12518.1893.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2160bp|location=Sequence derived from alignment at H-elongata_contig12518:5132..8374+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCCGCATCTCACGGTCAGGAGAAGATGGGGCGATGTGCGGTGTG
TAAAGATTTCTATCGCAAGGTGTTAATCTCGAGAGCGATTCAAGCGGTGA
AGGAGGGGCCATACAAGAACACTGCTAACGAGCACTTGAGCATGCCGCAA
AAGATGTCAGCCGCATCTCACGGTCAGGAGAAGATGGGGCGATGTGCGGT
GTGTAAAGATTTCTATCGCAAGGTGTTAATCTCGAGAGCGATTCAAGCGG
TGAAGGAGGGGCCATACAAGAACACTGCTAACGAGCACTTGAGCATGCCG
CAAAAGACAATCGTTTTGGTGGCACCAATCCACTTCAAACTTTATCATCC
CCGGTCACAGGATAGAAAGATGTTCGTCTTGGCGGAGGCGTTGCGAGTGG
AGAACGAGGCAATGATCCGATTGAAGACACGTGTTGTGGATGCACGACGA
GAATGCATGCTGTTTAATAAAGAGCAAGGAGCGAAGCTCCACGACCTCTT
GCTGTCTACCGAATCCAAGGCGGTGTTTAAGAAGAAGCTCCCAAAAGACA
GCACCCAGCGAGCGCTATACGAGACAATCGTTTTGGTGGCACCAATCCAC
TTCAAACTTTATCATCCCCGGTCACAGGATAGAAAGATGTTCGTCTTGGC
GGAGGCGTTGCGAGTGGAGAACGAGGCAATGATCCGATTGAAGACACGTG
TTGTGGATGCACGACGAGAATGCATGCTGTTTAATAAAGAGCAAGGAGCG
AAGCTCCACGACCTCTTGCTGTCTACCGAATCCAAGGCGGTGTTTAAGAA
GAAGCTCCCAAAAGACAGCACCCAGCGAGCGCTATACGAGGACCAGGTCA
GATGGAACACGAGCAACGGGAAAGCGAAGGGGTTCAGGTTCCACCCGGGA
ACACTCAGAATTGCAATCTACATACATGGGTGCGCTGACTCCGCGGCGTA
CAACATGTTGAGAACCTTCCTTCACTTGCCAAGCCCTTCCCGCGTCAAAC
AGTTGCAGCGTCAGACAGCACATCAACTGTCTGAGGTATTGAAAGGACCA
GGTCAGATGGAACACGAGCAACGGGAAAGCGAAGGGGTTCAGGTTCCACC
CGGGAACACTCAGAATTGCAATCTACATACATGGGTGCGCTGACTCCGCG
GCGTACAACATGTTGAGAACCTTCCTTCACTTGCCAAGCCCTTCCCGCGT
CAAACAGTTGCAGCGTCAGACAGCACATCAACTGTCTGAGGTATTGAAAG
CATTGGGCGAATGCGTTCTTCATTGGGCGAATGCGTTCTTAAATATGGCA
GGTTGGCCGCCGCATTAAACGCCGATAAGGCCGATCTCATGGGGATTTTG
ACCTGGGACCTGATGCACCTAAGCAAGAACGGCTTCGGCTTCGCTCCGAC
TACGGGGGGCATCATAGGTTTGATAGACGAGACGACGTTTTTCAATCCAG
TCTACCAAGGGAAACTGGACAACGACGGAGACATAGAGAAGCAGCTGGAC
AGGATACTAGCGACTCAATACAAATATGGCAGGTTGGCCGCCGCATTAAA
CGCCGATAAGGCCGATCTCATGGGGATTTTGACCTGGGACCTGATGCACC
TAAGCAAGAACGGCTTCGGCTTCGCTCCGACTACGGGGGGCATCATAGGT
TTGATAGACGAGACGACGTTTTTCAATCCAGTCTACCAAGGGAAACTGGA
CAACGACGGAGACATAGAGAAGCAGCTGGACAGGATACTAGCGACTCAAT
ACATGTACTTCGTCAGCTTGGGCAGACCAGAGTTCAAGTTCGTCGCGTGG
CGGGAGGCAACGCATGGTCTCGGCACGGATTATATCCAGCGAATGCTGAT
GAAGACCATGCGTCAACTTGTATTAGCACACCCTGACAAGGCGTTCGACG
TCATCGGCACCGTCTCAGACGGGGCATCCGAACAATGTACTTCGTCAGCT
TGGGCAGACCAGAGTTCAAGTTCGTCGCGTGGCGGGAGGCAACGCATGGT
CTCGGCACGGATTATATCCAGCGAATGCTGATGAAGACCATGCGTCAACT
TGTATTAGCACACCCTGACAAGGCGTTCGACGTCATCGGCACCGTCTCAG
ACGGGGCATCCGAACAGGCGACTTGGTCAACGTTATGGCGACTTGGTCAA
CGTTATAGAG
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