mRNA_H-elongata_contig12514.1892.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12514.1892.1
Unique NamemRNA_H-elongata_contig12514.1892.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 8.800e-197
Identity = 309/457 (67.61%), Postives = 348/457 (76.15%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVG-------GVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            REKL+DLIPV+F PV+GLAE+GPGQTLLRKMLVKLLQR+GTTYVPPRV+AWRY RGQRSLLQ+ +                       V++  + ++EG                T+   G    G +   K +  + D          AE+E+EV V  ELEDIV+ALLCGLRDRDTVVRWSAAKGIGRITERLP EL DDVVCSVLDLFV+AEWDG+WHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAG VGAHVRDAACYVCWAFARAYSP VLGPHLPGLCDSMLSTALFDREVNVRRAAAAA QENVGRQG+    E    G       GVAHGI IITAA+YFSLGNRQQAYL+I  +VA+FDRYR H+VD+LR +KL+HWDPE+R LSA ALG+  PL+P YAAETVL  AL D LSP+LLRRHGACL  +E+TL+LG+V
Sbjct:  196 REKLIDLIPVVFYPVVGLAEVGPGQTLLRKMLVKLLQRVGTTYVPPRVIAWRYRRGQRSLLQAAS-----------------------VEEKPLDRQEGQTVETNGSGGDAEEISTK-GVGVARDGASAQEKADVNEVDAV--------AEEEDEVGVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQENVGRQGQQQSGEHDGSGWSDGGGGGVAHGIDIITAAEYFSLGNRQQAYLDIGKNVAAFDRYRHHIVDTLRLDKLKHWDPELRRLSALALGRIAPLEPAYAAETVLSAALGDTLSPDLLRRHGACLALAEVTLSLGQV 620          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 589 bits (1518), Expect = 9.260e-195
Identity = 321/461 (69.63%), Postives = 359/461 (77.87%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLT----AATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRY--GGDEGPAVG-----GVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            REKL+DLIPV+F PV+GLAELGPGQTLLRKMLVKLLQR+GTTYVPPRVVAWRY RGQRSLLQ+L     AA++ G    + Q A        V++  + ++EG              S +    G    G     K++A + D          AE+EEEV+V  ELEDIV+ALLCGLRDRDTVVRWSAAKGIGRITERLP EL DDVVCSVLDLFV+AEWDG+WHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAG VGAHVRDAACYVCWAFARAYSP VLGPHLPGLCDSMLSTALFDREVNVRRAAAAA QENVGRQG+   G D+G         GVAHGI IITAADYFSLGNRQQAYL I  +VA+FDRYR H+VD+LR +KL+HWDPE+R LSA ALG+   L+P YAAETVLP AL D LSP+LLRRHGACL  +E+TL+LG+V
Sbjct:  285 REKLIDLIPVVFYPVVGLAELGPGQTLLRKMLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQNLESTPDAASDGGDCCQDEQQAAS------VEEKPLERQEGETVEAGGGEGDAEES-SAGGVGVAQDGPPAQVKVDATEVDVV--------AEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGGVGAHVRDAACYVCWAFARAYSPRVLGPHLPGLCDSMLSTALFDREVNVRRAAAAALQENVGRQGQQQSGEDDGXXXXXXXXXGVAHGIDIITAADYFSLGNRQQAYLNIGKTVAAFDRYRHHIVDTLRLDKLKHWDPELRRLSALALGRIASLEPAYAAETVLPAALGDTLSPDLLRRHGACLALAEVTLSLGQV 730          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 9.860e-134
Identity = 236/448 (52.68%), Postives = 275/448 (61.38%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALG 1344
            R  L+ +   +  P+  +A  G  QTLLRKM+VKL QRIG  ++PPRVVAWRY RGQRSLLQ+L                                                             G                      E   + E EVA E+E++V+ LLCGLRDRDTVVRWSAAKG+GR+T RLP  L D+VV SVLDLF DAE DG WHGGCLALAELARRGLLLP+RLP A P+V RA+AYDVRRG   VGAHVRDAACYVCWAFARAYSP  L PH+  LC +ML TALFDRE+NVRRAAAAAFQENVGRQG            VAHGI ++TAADYF+LG+R  AYL ++P VA FD YR  L D  R  +LRHWD ++R+ +A  LG    LD  YAA+ +LP AL D LSP+LL RHGACL  +E+ LALG
Sbjct:  298 RAALLPVAQRLLAPLAAIAAQGSSQTLLRKMVVKLFQRIGLAFLPPRVVAWRYQRGQRSLLQNLA------------------------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXEGADDVEFEVAEEVEEVVEQLLCGLRDRDTVVRWSAAKGVGRVTGRLPLALADEVVGSVLDLFSDAESDGGWHGGCLALAELARRGLLLPQRLPVAVPVVIRAMAYDVRRGTTGVGAHVRDAACYVCWAFARAYSPAALRPHMQELCRAMLCTALFDREINVRRAAAAAFQENVGRQGHQN---------VAHGIEVLTAADYFTLGSRAAAYLTVAPYVARFDAYRAALADCARASRLRHWDADVRAAAARCLGALARLDAAYAADVILPQALRDTLSPDLLVRHGACLGVAEVVLALG 676          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A2R5GKZ4_9STRA (Tubulin-specific chaperone D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKZ4_9STRA)

HSP 1 Score: 379 bits (974), Expect = 1.650e-115
Identity = 236/451 (52.33%), Postives = 276/451 (61.20%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAEL-GPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            REKL+  IPVIF  V+ ++   G   +L RK+ VKL+QR G  ++PPRVV WRY RGQRSLLQ+L            A+SAP        D         XXXXXXXXXX                                               ++  E+ED+V+ LL GLRDRDT+VRWSAAKGIGR+T RLP    DDVV  VL+LF  +E D +WHGGCLALAELARRGLLLP+RL    P V +AL YDVRRG  SVGA+VRDAACYVCWAFARAY P V+ PH+  LC  M+ TA+FDREVN RRAA+AAFQENVGRQG    D  P      HGI I+TAADYF+LG R+ AYLEI+P VA FD YRR L++ L   KL HWD ++R LSA AL      DP + AETVL D L   LSP++L RHGA L  S I  AL KV
Sbjct:  307 REKLLSHIPVIFSRVLRISNRDGQVSSLERKLTVKLVQRAGLNFLPPRVVKWRYQRGQRSLLQNL------------AKSAP------AADAXXXXXXXXXXXXXXXXXX----------------------------------------------ADIPEEVEDVVEKLLSGLRDRDTIVRWSAAKGIGRVTSRLPESHADDVVAFVLELFDASEGDAAWHGGCLALAELARRGLLLPKRLGAVVPFVVQALIYDVRRGHNSVGANVRDAACYVCWAFARAYEPAVMAPHVSELCPQMMVTAVFDREVNCRRAASAAFQENVGRQGH---DNFP------HGIEILTAADYFTLGIRKNAYLEIAPFVARFDVYRRPLIEHLVNYKLSHWDLQLRMLSADALHVLTASDPTFMAETVLRDLLPKTLSPDVLVRHGATLAVSTIVAALAKV 684          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: UPI0009E3009E (tubulin-specific chaperone D-like isoform X2 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3009E)

HSP 1 Score: 354 bits (908), Expect = 2.680e-113
Identity = 201/448 (44.87%), Postives = 259/448 (57.81%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGP-GQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLAL 1341
            RE L+   P++     G  E+     TLLRK+ +KL+QR+G T++ PR+ +WRY RG RSL+ +L                                                                     + +Q +R  +  GF  A++EEE +V  ELEDI++ LL GL+D+DTVVRWSAAKG+GRIT RLP EL D +V +VL+LF   E D  WHGGCLALAEL RRGLLLP+RLP   P V +AL+YD  RG  SVG+HVRD ACYVCW+FARAY P  + PH+ G+  S+++TALFDREVN RRAA+AAFQENVGRQG +            HGI I+T ADYF++GNR   YL IS S+A F  Y R L+D+L   +L+HWD  +R L++ AL    P DP Y  +TV P  L+   S +L  RHG  L  +E+T AL
Sbjct:   27 REDLIPYAPIVLKQT-GACEISSINNTLLRKLNIKLIQRLGLTFLRPRIASWRYQRGSRSLVYNLA-----------------------------------------------------------------NPFSQEQNERHHQVTGFS-ADEEEEYDVPEELEDIIEKLLTGLKDKDTVVRWSAAKGVGRITGRLPQELADQIVENVLELFSFRESDCGWHGGCLALAELGRRGLLLPDRLPEVVPAVLKALSYDEIRGYCSVGSHVRDGACYVCWSFARAYDPKEIQPHVQGIASSLVTTALFDREVNCRRAASAAFQENVGRQGTF-----------PHGIDILTLADYFAVGNRISTYLNISVSIAQFKEYTRPLIDNLADVRLQHWDGSVRELASQALHNLTPTDPEYITKTVFPKMLSQTNSIDLNTRHGNILGCAELTHAL 396          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A7S2WC38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC38_9STRA)

HSP 1 Score: 372 bits (955), Expect = 6.310e-113
Identity = 216/451 (47.89%), Postives = 263/451 (58.31%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAEL-GPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            REKL+  IP+IF  V+ +    G   +L RK+ +KL+QR G  ++PP+VV WRY RGQRSLL        E A+V                                      L  +ED                                   E+V++  E+ED+++ LLCGLRDRDT+VRWSAAKGIGRIT RLP EL DDVV  VL+LF  +E D +WHGGCLALAELARRGLLLP RL    P V +AL YDVRRG  SVGA+VRDAACYVCWAFARAY P V+ PH+  L   ML TA+FDREVN RRAA+AAFQENVGRQG              +G+ I+TAADYF+LGNR  A++EIS  V+ ++ YR+ L+D L   KL HWD E+R LS+       P  P Y A+TVL D L   LSP++L RHGA L   EIT AL  +
Sbjct:  290 REKLVSHIPIIFSRVLMITNRDGNISSLERKLTMKLVQRSGLNFLPPKVVKWRYQRGQRSLLHGAAKGV-ESAQV-------------------------------------ELEESED-----------------------------------EDVDIPEEVEDVIEKLLCGLRDRDTIVRWSAAKGIGRITSRLPEELADDVVAYVLELFDVSEGDSAWHGGCLALAELARRGLLLPNRLDTVVPFVVKALVYDVRRGYNSVGANVRDAACYVCWAFARAYEPDVMAPHVGSLAPQMLVTAVFDREVNCRRAASAAFQENVGRQGHDN---------FQYGVEILTAADYFTLGNRTNAFMEISAFVSKYEPYRKPLIDHLVSRKLVHWDLELRILSSKTFSVLTPKSPDYIAKTVLKDLLPMTLSPDMLIRHGATLGVGEITKALAAI 658          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: UPI0009E56733 (tubulin-specific chaperone D-like isoform X1 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E56733)

HSP 1 Score: 354 bits (908), Expect = 1.480e-110
Identity = 201/448 (44.87%), Postives = 259/448 (57.81%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGP-GQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLAL 1341
            RE L+   P++     G  E+     TLLRK+ +KL+QR+G T++ PR+ +WRY RG RSL+ +L                                                                     + +Q +R  +  GF  A++EEE +V  ELEDI++ LL GL+D+DTVVRWSAAKG+GRIT RLP EL D +V +VL+LF   E D  WHGGCLALAEL RRGLLLP+RLP   P V +AL+YD  RG  SVG+HVRD ACYVCW+FARAY P  + PH+ G+  S+++TALFDREVN RRAA+AAFQENVGRQG +            HGI I+T ADYF++GNR   YL IS S+A F  Y R L+D+L   +L+HWD  +R L++ AL    P DP Y  +TV P  L+   S +L  RHG  L  +E+T AL
Sbjct:  271 REDLIPYAPIVLKQT-GACEISSINNTLLRKLNIKLIQRLGLTFLRPRIASWRYQRGSRSLVYNLA-----------------------------------------------------------------NPFSQEQNERHHQVTGFS-ADEEEEYDVPEELEDIIEKLLTGLKDKDTVVRWSAAKGVGRITGRLPQELADQIVENVLELFSFRESDCGWHGGCLALAELGRRGLLLPDRLPEVVPAVLKALSYDEIRGYCSVGSHVRDGACYVCWSFARAYDPKEIQPHVQGIASSLVTTALFDREVNCRRAASAAFQENVGRQGTF-----------PHGIDILTLADYFAVGNRISTYLNISVSIAQFKEYTRPLIDNLADVRLQHWDGSVRELASQALHNLTPTDPEYITKTVFPKMLSQTNSIDLNTRHGNILGCAELTHAL 640          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A5A8D3P0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3P0_CAFRO)

HSP 1 Score: 350 bits (898), Expect = 1.110e-109
Identity = 211/455 (46.37%), Postives = 260/455 (57.14%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTL-----LRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            R+ L D     F  +  +A    GQ L     LR++LVKL QR G  Y+PPRV +WRY RGQRSLL +L  A    A  + A+ A EP                                                                   E +++ ++   +ED++D+LL GLRD DT+VRWSAAKGIGR+  RLP E  D+VV +V  L   AE DG+WHGGCLALAELARRGLLLP RL    P V  AL +D RRGA SVG+HVRDAACYVCWAFARAYSP V+ P +  L  ++L  ALFDREVN RRAAAAAFQE+VGRQG    D  P      HGIAI+TAADYFSLGNR  A+  ++  VA+F  YR  L++ L   KLRHWD ++R LSA AL    PL P +AA  +LP   A+  S +LL RHGA L  +E+ L+L ++
Sbjct:  363 RDSLADAAGEAFCRISQVAASEQGQLLRSSASLRRLLVKLSQRTGLVYLPPRVASWRYQRGQRSLLDNLRGAGPAAALPSRARDAEEP-------------------------------------------------------------------EADDDFDIEPVVEDVIDSLLTGLRDHDTIVRWSAAKGIGRVAGRLPREFADEVVEAVATLLDRAEGDGAWHGGCLALAELARRGLLLPARLSDVVPRVVSALQFDERRGATSVGSHVRDAACYVCWAFARAYSPSVMRPWVRPLAAALLCVALFDREVNCRRAAAAAFQESVGRQGA---DNFP------HGIAILTAADYFSLGNRAHAFTHVARQVATFATYRGALLEHLVGVKLRHWDVDVRRLSARALAYLAPLQPEWAASDLLPRLTAETTSADLLVRHGATLAIAEVLLSLARL 741          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A8B6GFI1_MYTGA (Tubulin-specific chaperone D n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GFI1_MYTGA)

HSP 1 Score: 350 bits (897), Expect = 1.340e-108
Identity = 202/450 (44.89%), Postives = 259/450 (57.56%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            RE L+   PV+   V  L +     TLLRK ++K++QR+G T++  RV AWRY RG RSL  +L+                                                              T   K N+QQ   F    G  + +++EE ++  E+ED+++ LL GLRD+DT+VRWSAAKGIGRIT RLP EL D+VV SVL+LF   E DG+WHGGCL+LAEL RRGLLLP+RLP   P+V +AL YD +RG  SVGAHVRD+ACYVCWAFARAY P  + P++  + ++++  ++FDREVNVRRA++AAFQENVGRQG +            HGI I+T ADYF++GNR   YLE+S  VA F  Y + ++D L   K+ HWD  IR LSA  L K     P Y A  VLP  L      +L  RHGA L  +EIT AL KV
Sbjct:  196 REDLLKYAPVVKKKVEELKKKETNDTLLRKSVIKVIQRLGLTFLKNRVAAWRYQRGSRSLADNLS--------------------------------------------------------------TTFDKNNSQQ---FV---GVAKDDEDEEYDIPDEIEDVIEHLLGGLRDKDTIVRWSAAKGIGRITGRLPKELADEVVGSVLELFTIQESDGAWHGGCLSLAELGRRGLLLPQRLPDVVPVVLKALDYDEKRGNFSVGAHVRDSACYVCWAFARAYDPQEIAPYVNDVANALVKASIFDREVNVRRASSAAFQENVGRQGTF-----------PHGIDILTMADYFAVGNRNHCYLELSIFVAKFPEYTKSMIDHLVDMKINHWDGIIRDLSAQGLHKLTSCSPDYMASQVLPKMLPMTTGIDLYLRHGAILAVAEITHALSKV 566          
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Match: A0A6J8D7H1_MYTCO (Tubulin-specific chaperone D n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8D7H1_MYTCO)

HSP 1 Score: 355 bits (910), Expect = 2.530e-108
Identity = 204/450 (45.33%), Postives = 260/450 (57.78%), Query Frame = 1
Query:    1 REKLMDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYSRGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGXXXXXXXXXXXRRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEEEVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVVCSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAYDVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALFDREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSLGNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGKTVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKV 1350
            RE L+   PV+   V  L +     TLLRK ++K++QR+G T++  RV AWRY RG RSL  +L+                                                              TP  K N+QQ   F    G  + +++EE ++  E+ED+++ LL GLRD+DT+VRWSAAKGIGRIT RLP EL D+VV SVL+LF   E DG+WHGGCL+LAEL RRGLLLP+RLP   P+V +AL YD +RG  SVGAHVRD+ACYVCWAFARAY P  + P++  + ++++  ++FDREVNVRRAA+AAFQENVGRQG +            HGI I+T ADYF++GNR   YLE+S  VA F  Y + ++D L   K+ HWD  IR LSA  L K     P Y A  VLP  L      +L  RHGA L  +EIT AL KV
Sbjct:  257 REDLLKYAPVVKKKVEELKKKETNNTLLRKSVIKVIQRLGLTFLKNRVAAWRYQRGSRSLADNLS--------------------------------------------------------------TPFDKNNSQQ---FV---GVAKDDEDEEYDIPDEIEDVIEHLLGGLRDKDTIVRWSAAKGIGRITGRLPKELADEVVGSVLELFTFQETDGAWHGGCLSLAELGRRGLLLPQRLPDVVPVVLKALDYDEKRGNFSVGAHVRDSACYVCWAFARAYDPQEIAPYVNDVANALVKASIFDREVNVRRAASAAFQENVGRQGTF-----------PHGIDILTMADYFAVGNRNHCYLELSIFVAKFPEYTKSMIDHLVDMKINHWDGIIRDLSAQGLHKLTSCSPDYMASQVLPKVLPMTTGIDLYLRHGAILAVAEITHALSKV 627          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12514.1892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH41_9PHAE8.800e-19767.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNX3_ECTSI9.260e-19569.63Tubulin folding cofactor D n=1 Tax=Ectocarpus sili... [more]
A0A835ZJS0_9STRA9.860e-13452.68Tubulin folding cofactor D n=1 Tax=Tribonema minus... [more]
A0A2R5GKZ4_9STRA1.650e-11552.33Tubulin-specific chaperone D n=1 Tax=Hondaea ferme... [more]
UPI0009E3009E2.680e-11344.87tubulin-specific chaperone D-like isoform X2 n=1 T... [more]
A0A7S2WC38_9STRA6.310e-11347.89Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI0009E567331.480e-11044.87tubulin-specific chaperone D-like isoform X1 n=1 T... [more]
A0A5A8D3P0_CAFRO1.110e-10946.37Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A8B6GFI1_MYTGA1.340e-10844.89Tubulin-specific chaperone D n=1 Tax=Mytilus gallo... [more]
A0A6J8D7H1_MYTCO2.530e-10845.33Tubulin-specific chaperone D n=1 Tax=Mytilus corus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12514contigH-elongata_contig12514:105..8217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score583.6
Seed ortholog evalue8.1e-164
Seed eggNOG ortholog2880.D8LNX3
KEGG koko:K21767
EggNOG free text desc.post-chaperonin tubulin folding pathway
EggNOG OGsCOG2116@1,KOG1943@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons7
Model size1368
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12514.1892.1prot_H-elongata_contig12514.1892.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12514 117..8217 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929739.363854-UTR-H-elongata_contig12514:104..1161622929739.363854-UTR-H-elongata_contig12514:104..116Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12514 105..116 +
1691679139.1013207-UTR-H-elongata_contig12514:104..1161691679139.1013207-UTR-H-elongata_contig12514:104..116Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12514 105..116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929739.377653-CDS-H-elongata_contig12514:116..2901622929739.377653-CDS-H-elongata_contig12514:116..290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 117..290 +
1691679139.1198363-CDS-H-elongata_contig12514:116..2901691679139.1198363-CDS-H-elongata_contig12514:116..290Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 117..290 +
1622929739.3895595-CDS-H-elongata_contig12514:1806..22181622929739.3895595-CDS-H-elongata_contig12514:1806..2218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 1807..2218 +
1691679139.1327386-CDS-H-elongata_contig12514:1806..22181691679139.1327386-CDS-H-elongata_contig12514:1806..2218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 1807..2218 +
1622929739.4019365-CDS-H-elongata_contig12514:3308..34051622929739.4019365-CDS-H-elongata_contig12514:3308..3405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 3309..3405 +
1691679139.140714-CDS-H-elongata_contig12514:3308..34051691679139.140714-CDS-H-elongata_contig12514:3308..3405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 3309..3405 +
1622929739.4126303-CDS-H-elongata_contig12514:4898..50581622929739.4126303-CDS-H-elongata_contig12514:4898..5058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 4899..5058 +
1691679139.148577-CDS-H-elongata_contig12514:4898..50581691679139.148577-CDS-H-elongata_contig12514:4898..5058Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 4899..5058 +
1622929739.4220002-CDS-H-elongata_contig12514:5883..59851622929739.4220002-CDS-H-elongata_contig12514:5883..5985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 5884..5985 +
1691679139.1570017-CDS-H-elongata_contig12514:5883..59851691679139.1570017-CDS-H-elongata_contig12514:5883..5985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 5884..5985 +
1622929739.4314237-CDS-H-elongata_contig12514:6604..67651622929739.4314237-CDS-H-elongata_contig12514:6604..6765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 6605..6765 +
1691679139.1651266-CDS-H-elongata_contig12514:6604..67651691679139.1651266-CDS-H-elongata_contig12514:6604..6765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 6605..6765 +
1622929739.4407952-CDS-H-elongata_contig12514:7967..82171622929739.4407952-CDS-H-elongata_contig12514:7967..8217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 7968..8217 +
1691679139.1883972-CDS-H-elongata_contig12514:7967..82171691679139.1883972-CDS-H-elongata_contig12514:7967..8217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12514 7968..8217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12514.1892.1

>prot_H-elongata_contig12514.1892.1 ID=prot_H-elongata_contig12514.1892.1|Name=mRNA_H-elongata_contig12514.1892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=452bp
MDLIPVIFDPVIGLAELGPGQTLLRKMLVKLLQRIGTTYVPPRVVAWRYS
RGQRSLLQSLTAATNEGARVAEAQSAPEPSPHEVVDKGEVAKREGGGQKG
GGGGGERRLSPTEDNEGRNNGGITPTGKMNAQQEDRFREGGGFPEAEQEE
EVEVAGELEDIVDALLCGLRDRDTVVRWSAAKGIGRITERLPHELGDDVV
CSVLDLFVDAEWDGSWHGGCLALAELARRGLLLPERLPRACPLVRRALAY
DVRRGAGSVGAHVRDAACYVCWAFARAYSPLVLGPHLPGLCDSMLSTALF
DREVNVRRAAAAAFQENVGRQGRYGGDEGPAVGGVAHGIAIITAADYFSL
GNRQQAYLEISPSVASFDRYRRHLVDSLRREKLRHWDPEIRSLSATALGK
TVPLDPVYAAETVLPDALADVLSPELLRRHGACLVASEITLALGKVCGSF
V*
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mRNA from alignment at H-elongata_contig12514:105..8217+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12514.1892.1 ID=mRNA_H-elongata_contig12514.1892.1|Name=mRNA_H-elongata_contig12514.1892.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8113bp|location=Sequence derived from alignment at H-elongata_contig12514:105..8217+ (Himanthalia elongata Himel1 dioecious)
AGGGAGAAACTCATGGACCTGATCCCCGTGATTTTCGACCCGGTGATTGG CCTCGCCGAGCTGGGACCAGGACAGACCCTTCTTCGCAAGATGCTGGTGA AGTTGCTGCAGAGGATCGGGACCACGTACGTGCCTCCCCGGGTGGTGGCG TGGAGATACTCTCGCGGGCAGAGGTCACTGCTCCAGGTGCGCGGTGCCTA CTCTTTCTTCCGCCTCATGTTTTACCTCGCTTTCTTAGGCGGAGAGGAAT TGGGAGTTCCAATCTTCGGTAAAATTGGCGTTTCTCCGAGTGAAGCGGCG AAAGATTCCCGGAAATGGAATGTCGGATAGGAATTGTTTCGCTCGGTTGC TTGTGGACGGGATGAGATGAGCCCAGCTCTATTATTTTCGTTTTAAATGG TTGCTTGAACTCATTCCCTATTATGGTAATGATGGTTTTGGGTGCTTAGG TGCATGACTCGGCGTCGACGCGATCGCGATCGCGATCGCGCTACAAACGT GAGCGTTAATGCTAACTGCAGCGTAAAGCGCTGACCGCCCGAGCATACCT CGGGAACATCCTCCTGTAACCTGTGAGGTTGCGCTTCACCCTCCCCCCCC CGACCTTGCACAAATCACCGACCTGTTGAGGTCGTAGCAGCTTTGGCACT AGAACGAATTGTTAATAGCCATTGATGGATCCCTCCTCGTCCCGCCGTGG ATGACTATGACAAATAAAGGTTGCACCGGATATACCCATAGCACGACCCC AACGACTACGAAAAAAGGGAACGTTTTGTTATGAAACTATCGACCCGATG AAGTTACCACCGGGGAACACGAATAATCAATAATCACATATTTCGTACGA CAATTTTATGCATAAATGTAGTTAATGTCCACATTCGAACCTGACGATAG TTGGTCCCCTGGACTACACCTCTCATGGTGCTAAGAAGGCATGGATGTTC GGAGGGTTTTAATGAGTTAGTTCATATGTTTTTTAATATATAGAGAAAAA GGAGAAAGTTTGACGCCGAGTACGGCATGCCAATGGTTTACTATACTGTA CTGTACTATACTGTAGTCGGGAATGAACCGGCTAGACCAGTCAAAAAAAC ATGAGTGGCGTGCATCGACTTTTATACACACCGCATATTTTAACACCGAC TGATGCTCCTGTAGATGTACAAGGTCTTTTCCCAGGGCATCACCGACCGC GGAAGCTGTTGGAGAAGATGACATCGGCAATGGTACTGCCGAAATATAGC AAGAATAAATTCATATATGTTTTAAATAAAAACTATAATACTCCCGAATA TATTACACTACCGACTTATGCCACCGAATACAGCCACTATGGTACTAATA ATACCGAATTACAACACCCACTATGGTACTATTCATATTAATGCCGAATA CAGCGCTATTAGTACCGAATTACAACACCCACTTATGATACACAACCGAA TTATGACATCGGGCTGGATTTTTGACATCAGCTTATGTGAGAATTCAATC AAATAAATAAAAAATCTACGAATGCCAAAACCAGTTCAAAGCGCAGTACC GACTATGACACCGATCACAGTGTAACGCGACTTTCGACACATGTTCCTTG ACCCACGACTCATGGCCACTGTCGTCAGTATTAATGACCCCTCACCCTCG CCCCTCCTCTCCCGGAACTGACCCCCTTCCAACCGCTTCCTGCGCGCGCA AGAGCCTCACCGCTGCTACGAACGAGGGCGCGCGCGTCGCCGAGGCCCAA TCAGCGCCCGAGCCTTCGCCACACGAGGTCGTGGACAAAGGCGAGGTCGC AAAACGGGAGGGAGGGGGACAAAAGGGAGGAGGAGGAGGAGGCGAGAGGA GGCTTTCGCCGACGGAGGACAACGAGGGACGGAACAACGGGGGGATAACT CCAACTGGGAAAATGAATGCACAGCAAGAGGATAGATTTCGAGAGGGGGG TGGGTTTCCGGAGGCGGAGCAGGAAGAGGAGGTGGAGGTCGCCGGGGAGT TGGAGGATATCGTGGATGCCTTGCTGTGCGGATTAAGGGACAGGGACACC GTCGTGCGGTGGTCGGCTGCGAAGGGGATCGGCAGGATCACGGAAAGGCT TCCGCACGAGCTGGGTGCGATATATACAGTTTCTATACACATATATATAT ATGATCTGATTAGAAAACTGGGGAGTTGGTATAGAGAAAGGGATCATTCT CTTGTTGAAAACCGGGTGTCTGAGAGAGCGGAGACTTTAGCTGCTGATGG GTTTGTGTTCATCGTATTTATGGAAACGGTGCAAAAACTTATGGTTAAAA AATAAAAAAATAGGAGTCTCGACGTCGCTTTGATCTGAAAAAAACTAATA TATCCCAAATATTTTGCAGTGCACAACATTTATTACTATTACTCTTACTA TTACTATTACTATTACTCTACCTAGATCGATCGATCGCAACGTTTCATGT ATTACTATTACTCTACCTAGATCATATATAACGCGGTTTGCGGAATACGT TCCTGCATTACAGAACACTGACTCGTGTTCTGCGGGGTGGTCGGAGAAGT CCAAATTATCTCCACATATACATATTGCTCCACCGTCTCGACGGAGCTCT TCTCTGCTGAGATTTACCGCAACCCGTCGACGCCCCTATCCCCGGTGTTG AATAACGCCCGCCCACCCTCGAGAGACCCAACCTACGTGATAATGCCGAA ATGTATTAATTCAAAGAACACATGCATAACATAACATAACAGATATCGGT GCTGGTAGTATCAAAATCAAATACATAAATACCTTTTATGGATATATTTA CAGTCCACACACCTAATATATTTTAAAAATACTGCTTCGAAGTTCAGATT AGATTATAAGTGTTGAACGCCGTCTTGTTTTCCCGCCTCGTTTACCGCCT TTCCCTCTAAATAGCAAGCCCCGTTGACTCTCCTTGTCTGCCAAATGGTA TATTCTTTACAATACCTTTTATATGTTATACCTTTTGTGGCGGGTTACCT TATTTGGTGGTGGTGGTGTTGGTGTTTTATTTTTTGTGGAGGTTTTTCTT CCATCCTTTTTCTACGAAACATTGAAAACATAAGACCCACTCGGCGTGGC GTGTGAGAGCAACAACGTCACGAACAACAATAACAACAGCAGCTGTTTTT AATAGAATACTCGTTGACGATGACGTTGACGATGACGATGACGATTATCC GCAGGCGACGATGTGGTATGCAGTGTGTTGGACCTATTCGTCGACGCGGA GTGGGATGGCTCCTGGCACGGAGGCTGCCTCGCGCTCGCAGAGCTCGCCA GGTGATTTATATATTTTTAAGGGAGGGGGGGATTTGGTGTCTCAGGTATA CTATAATATATACTATAATATATACTAGTACTGGTTATATTCTTTAATTG CCCCCCCCTCCCCTCCCCTGACGTAATGCCTTTTCGAGTATAGGGTATAG GGTTTGGAGGAGTTCATGCAATGTATCGTGTGAACTCAAGAGACCTCTGT CGAGGGTTTTTCTTTCCCCCCGTAGGGGTGAATTACATGAAACACGTGCG TTCCGATGGACGCATGCAAATGGTCTCTGCTTCACGGCTGCTACTCTTTT GCCACCATCTGCTTTGAGTCTTGAATACAGTATAGTGCAGTAGCTTTATA ATAGTCTTGAATACAGTACAGTAGGGCGGGGCAAAAACATATTACCGTAA GCTTTATAATGAGTTGTGGCATGCACCGCGTGAGGATAGAATACAGTACA GTACTGGAGTGGAGTGATAAATACGCGCGTCGTCGCGCGCGATTTTAGTT CTCGCGACAAGTAACACCATGATATCCATGAGCGAACCAGGCACCTATTA TGTCCGTGGTACAAGATAAGCAGCAGTCGGGGACCGAGCGATTACAAAAA ACAGAAGGTGTCGGTCGATACGGTTACGACCGGGAAAATTAAGGAGGTGT GTTTTGGGAGGGGGTGGGAGGCCGGGGAGTATGTTTTTATCTCTTTCTGT TAATGGGTTAGTTAGATCATTCCACGTCCTATTATTAATATTAATAGTAG GTTATGCTCCTATCCCTCCAATCCCTCCTACCGCAACGCCTCGCAACGCA TCGCAACCTGCCTGTCATCACCCGAAAAGGAAGGGGGAAGGGATCTATCT ACTCATCTTCTCTCCCCGGTTGGTTCACGCCTCCCTACGATTTTTATACC TCTACTGGTGCATGCTCAGCACTCACTCCTCCTACACCTCGTCAACGAAT GACTGAACGTTGCTTGCTTACTGCTGTTCTCCCTTTTTAAAACTATATAT TACTAAATATTACGATCAAAATACTACCAAAAGACTACCGGGTACCTTAT GTAATACCCCTACATCAACCAGAACAGAACGACTGAACGTTAAAAGCTGT AAATACGAAACACCGAAAAATGCCGACGCAAGAAAGCGAGAATACCTGGG GAAGGATTATCACATCCCTTATCCCCTACCTATTATCCTCTATACTGTAC CCCACACCCTGTTTACCCTGTATCTAGTCATTGCCCTATCCCCCTATCCC CTTCACCTATATTTTTTACCGTTTCTCCCACCCTATACCTCTTTCCCGTA TCCCTTGTACCTTTTCCATTGATATCGTACCCCCCATCCCCTGTATTATC CCTTACCACAACCGTACCGTACACTCTTGCCCCTGTATCTTATACTGCAC CCTATATCATACCTCCCATCGAATGTCCTGCCCCTCCCCCCCCCCGTACA CCTTTATACCCCCAACATCCCCGATCCCACTCCCTCTGTGCCAGGCGCGG TTTGCTGCTGCCCGAGAGGTTACCGCGAGCCTGCCCCTTGGTGAGGCGGG CGCTGGCGTACGACGTAAGAAGAGGGGCTGGCAGCGTAGGCGCGCACGTG CGAGACGCCGCCTGCTACGTGTGCTGGGCGTTTGCCCGGGCCTATTCCCC TCTGGTGGGTGTTCCAACGGATTAGGCGTTTATTGCCCAGCTGGAGCCTC CACTGCCCGCGGTTGGGTTCTTAAGGCGGCAAATCTAGTTTGATTTCAGC AATCGACAGGGCTGTGTCAACTCGAAACAATGACGTGAACTGCAAAACGC CGGTCCGCCGAAATAGAAAGTATTTTTATTTACTAGTTTTGTTATTATTT ATATATTTTTTAAATCATTTTTTTTTCGTTATTATTACTACTTTTTGTTG ATATTTTTCAAGTCAAGCCACCGTGATCCCCACTCAACGTACCCATTGTG GCTTAGTATTGGTGCTATTCGTTTTGGGGAGTTCCATTTAATGGTTTATA TTAATAGAGTAGACGAAGAAGGAAGCGGAGACGGGGGGGGGGTGCACGGC AGATTCCGCCACTCACGTCATCCGACAATTTCAGACCAGATCGATGGATG GAGCACCTTTGTCTGCCTCTTCGAATCGATTTGGGATCTTTACCCTTTTG TTTTTAGAGTTATTTGACTTAGCCTTTTACGGAGGGTGGTGGTTGTTCGA GGCTCAAAAATAAATAAAACAAAACCAAACAAGCTAAAACAATTAAAAAA AAAGTTATACAGTATCAAACATATCGCAGAGCCAATTAATGTACGAAATA TTAGTCTAAATATATTATACCGATAATTTGTATTTATTTATTTATTTACT GCGCTGACTTGTCCTATTTTGCCTCTCCCTGCCAATGCACCCGTTCATGC TGTCTTGCACCTGTACCGTATCGATCTGTCGATGATGCATCAACATCGGT ATTATTCCTATGCTGTATGAATATCGAAGGTCCTCGGGCCGCACTTGCCA GGGCTTTGCGACTCGATGCTGTCAACGGCTTTGTTCGACCGCGAAGTCAA CGTGCGGCGCGCTGCCGCCGCCGCGTTCCAGGCGAGCTTTCCCTACCCCC ATCCACGTCTCCCCTTCCGCATCATGCTTGCCCTTTTCTCCGGGTAGCCC CGTATCATGCTTACAGACGGTGTGCCTCGTACATTAAACCCCTCCTGGGT ACAAAACGATATGGTATGGTATATGGTATGGTGTTGATAAAAATAAAAAG TACAAAAGGAAGAAAAATCGTATATAATATAGTATAGAAAATGGATGGAA AAGAGAGAAGGTTGTACAAAAAAACAACACCCAAAACGATTGCGCGCCCG CTAAAGAAACGGATATTTGTTTGGATATTGTGGGAGGTGGGATGTGTAAT TTTCCGTATCCTCGGCAAGCAGTGAAAAGAGATGAAGAGAAAGATAAGTT GGCGTGGGGGGGGGGGGTGGAGGCGTCTTCAAGCTTTGTAGCACATGCCT TACCGGTTGTACCATTGACCACGTATGCCCGGGAGGACGGATCTTTCCGG GGCGCGGGGGTAAACCGGGTTGCTTGAAGGCGAGATTCGACTCCTTTAAT TCTCTTCTACGCCAAGTCTCTTTGGAAAGCCATTGTTATCGTGTGGTGCT GTTTACTTTCTTCCCTCCTCCACCTCCTCCTCACTCTCTCGTTGCGCCAG GAAAACGTCGGAAGACAGGGACGGTACGGGGGGGACGAGGGACCCGCGGT CGGCGGGGTTGCGCACGGAATAGCCATCATCACCGCAGCGGATTACTTCT CCCTCGGGAACCGGCAGCAGGCGTACCTAGAGATCAGCCCGTCGGTGGCG TCTTTTGATAGGTAGGTCGTGCGAGATTGTTAATAATTATCGTCCTCGCT CTCCCCCTACCCCCTACCCCCAACCCCCAGATCTCTCTCTCTCTCTCTCT CTATCTCATGTGTATGTGTTTTTGTAGTTAATTTATGTATCGGGTTTTTG TACCATGTACCGTAGGTGGTGGTGCTGGTGCATTTTACACACCGGGGATA GTAATCCACGACCCCCGCCCCTCCCCTCTCCTTCCCAATTATCACCCCCT CAGGAAGTTGTCTACTAAAGCGTACAGCGCAGCCCAACTAACTTTGGCAC TGTACTGTGCTGTACTGGACGTCTTTTGGGGGAAATAGAAATATGCTGGA GATATATTTCCATAAATCTGCCGTGTTTTTGTTGTTGCTGGTTTGTCTGC GCCGGGGACGCGAATCTTCCATCCCCATTGATGGAGGAGGCGTTATACGT GATTCGAGTCAACCCTCAATCGACGGATCTTGTTGTGGTGTCGTTTGATT CAATTTCGCTGAGCGTCCTGCCTTCACGCTTCTTACGCCTGCGTTACACT ACACTACACTACAGTATAGTACACAATAGTACACTTTTCTATTAATACGA GCCAAACCTATACGCTATACGCGATACGCAACCTCTAAACAACACTCGAC AGCTCGGACCGTGTCTTGCTAGTTCTGTGTTCAACTATTTACCCATCCTC CCACACTATAGACTATAGACTATGTTCAACACTATTCATAGGTGCAATAC TGATTTTTATTTCCGAGCTACTATCAATATTAATACTATACACGATTGTT TCTTGACGTTCTTATGATAACGTTACCGTTTATCGCTGGTATAGTATTGT GATTAGACACGGAATGTGCTCGAGCGGTGTCCCTACGTGATGATCACACT TTATGAGCGCAGCGCCCCGATTAACTGTGCTAGATGTTGGCTCTATTAAA TAGTAATAGTATAGTATAGTAATATTCTAGATGTTGGCTCGGTGTTCCTG TGTGCTAAGCTGCACTACCGTTGAGTATTTTACGCCACACGACTATTCTA CATTATATAAAAATTATGTTTGGTACCTTGAACTTTTATATGTCTTGCCT CTACTGCGTGTTGAACAACCCCCCCCTCCCTCCCTCCCCGCAGATCAACA AACGCCTCCCGGCGTTCGTATCGTCCTTTACGTGTAAACATTCTTCTCCA CTTGGCGATGCAGGTATCGACGGCACCTTGTGGACAGTCTAAGGCGAGAA AAGCTGCGGCACTGGGACCCGGAGATCCGCAGCCTCTCCGCCACCGCCCT CGGAAAAACTGTCCCCCTCGACCCCGTCTACGCGGCGGAGACTGTTCTGC CCGATGCCCTCGCGGATGTGCTCTCCCCGGAGTTGCTCAGGCGGCACGGG GCGTGTCTCGTGGCCTCGGAGATCACACTAGCGCTGGGAAAGGTATGTGG GAGTTTTGTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig12514:105..8217+

>mRNA_H-elongata_contig12514.1892.1 ID=mRNA_H-elongata_contig12514.1892.1|Name=mRNA_H-elongata_contig12514.1892.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2712bp|location=Sequence derived from alignment at H-elongata_contig12514:105..8217+ (Himanthalia elongata Himel1 dioecious)
ATGGACCTGATCCCCGTGATTTTCGACCCGGTGATTGGCCTCGCCGAGCT
GGGACCAGGACAGACCCTTCTTCGCAAGATGCTGGTGAAGTTGCTGCAGA
GGATCGGGACCACGTACGTGCCTCCCCGGGTGGTGGCGTGGAGATACTCT
CGCGGGCAGAGGTCACTGCTCCAGATGGACCTGATCCCCGTGATTTTCGA
CCCGGTGATTGGCCTCGCCGAGCTGGGACCAGGACAGACCCTTCTTCGCA
AGATGCTGGTGAAGTTGCTGCAGAGGATCGGGACCACGTACGTGCCTCCC
CGGGTGGTGGCGTGGAGATACTCTCGCGGGCAGAGGTCACTGCTCCAGAG
CCTCACCGCTGCTACGAACGAGGGCGCGCGCGTCGCCGAGGCCCAATCAG
CGCCCGAGCCTTCGCCACACGAGGTCGTGGACAAAGGCGAGGTCGCAAAA
CGGGAGGGAGGGGGACAAAAGGGAGGAGGAGGAGGAGGCGAGAGGAGGCT
TTCGCCGACGGAGGACAACGAGGGACGGAACAACGGGGGGATAACTCCAA
CTGGGAAAATGAATGCACAGCAAGAGGATAGATTTCGAGAGGGGGGTGGG
TTTCCGGAGGCGGAGCAGGAAGAGGAGGTGGAGGTCGCCGGGGAGTTGGA
GGATATCGTGGATGCCTTGCTGTGCGGATTAAGGGACAGGGACACCGTCG
TGCGGTGGTCGGCTGCGAAGGGGATCGGCAGGATCACGGAAAGGCTTCCG
CACGAGCTGGAGCCTCACCGCTGCTACGAACGAGGGCGCGCGCGTCGCCG
AGGCCCAATCAGCGCCCGAGCCTTCGCCACACGAGGTCGTGGACAAAGGC
GAGGTCGCAAAACGGGAGGGAGGGGGACAAAAGGGAGGAGGAGGAGGAGG
CGAGAGGAGGCTTTCGCCGACGGAGGACAACGAGGGACGGAACAACGGGG
GGATAACTCCAACTGGGAAAATGAATGCACAGCAAGAGGATAGATTTCGA
GAGGGGGGTGGGTTTCCGGAGGCGGAGCAGGAAGAGGAGGTGGAGGTCGC
CGGGGAGTTGGAGGATATCGTGGATGCCTTGCTGTGCGGATTAAGGGACA
GGGACACCGTCGTGCGGTGGTCGGCTGCGAAGGGGATCGGCAGGATCACG
GAAAGGCTTCCGCACGAGCTGGGCGACGATGTGGTATGCAGTGTGTTGGA
CCTATTCGTCGACGCGGAGTGGGATGGCTCCTGGCACGGAGGCTGCCTCG
CGCTCGCAGAGCTCGCCAGGCGACGATGTGGTATGCAGTGTGTTGGACCT
ATTCGTCGACGCGGAGTGGGATGGCTCCTGGCACGGAGGCTGCCTCGCGC
TCGCAGAGCTCGCCAGGCGCGGTTTGCTGCTGCCCGAGAGGTTACCGCGA
GCCTGCCCCTTGGTGAGGCGGGCGCTGGCGTACGACGTAAGAAGAGGGGC
TGGCAGCGTAGGCGCGCACGTGCGAGACGCCGCCTGCTACGTGTGCTGGG
CGTTTGCCCGGGCCTATTCCCCTCTGGCGCGGTTTGCTGCTGCCCGAGAG
GTTACCGCGAGCCTGCCCCTTGGTGAGGCGGGCGCTGGCGTACGACGTAA
GAAGAGGGGCTGGCAGCGTAGGCGCGCACGTGCGAGACGCCGCCTGCTAC
GTGTGCTGGGCGTTTGCCCGGGCCTATTCCCCTCTGGTCCTCGGGCCGCA
CTTGCCAGGGCTTTGCGACTCGATGCTGTCAACGGCTTTGTTCGACCGCG
AAGTCAACGTGCGGCGCGCTGCCGCCGCCGCGTTCCAGGTCCTCGGGCCG
CACTTGCCAGGGCTTTGCGACTCGATGCTGTCAACGGCTTTGTTCGACCG
CGAAGTCAACGTGCGGCGCGCTGCCGCCGCCGCGTTCCAGGAAAACGTCG
GAAGACAGGGACGGTACGGGGGGGACGAGGGACCCGCGGTCGGCGGGGTT
GCGCACGGAATAGCCATCATCACCGCAGCGGATTACTTCTCCCTCGGGAA
CCGGCAGCAGGCGTACCTAGAGATCAGCCCGTCGGTGGCGTCTTTTGATA
GGAAAACGTCGGAAGACAGGGACGGTACGGGGGGGACGAGGGACCCGCGG
TCGGCGGGGTTGCGCACGGAATAGCCATCATCACCGCAGCGGATTACTTC
TCCCTCGGGAACCGGCAGCAGGCGTACCTAGAGATCAGCCCGTCGGTGGC
GTCTTTTGATAGGTATCGACGGCACCTTGTGGACAGTCTAAGGCGAGAAA
AGCTGCGGCACTGGGACCCGGAGATCCGCAGCCTCTCCGCCACCGCCCTC
GGAAAAACTGTCCCCCTCGACCCCGTCTACGCGGCGGAGACTGTTCTGCC
CGATGCCCTCGCGGATGTGCTCTCCCCGGAGTTGCTCAGGCGGCACGGGG
CGTGTCTCGTGGCCTCGGAGATCACACTAGCGCTGGGAAAGGTATGTGGG
AGTTTTGTGTAGGTATCGACGGCACCTTGTGGACAGTCTAAGGCGAGAAA
AGCTGCGGCACTGGGACCCGGAGATCCGCAGCCTCTCCGCCACCGCCCTC
GGAAAAACTGTCCCCCTCGACCCCGTCTACGCGGCGGAGACTGTTCTGCC
CGATGCCCTCGCGGATGTGCTCTCCCCGGAGTTGCTCAGGCGGCACGGGG
CGTGTCTCGTGGCCTCGGAGATCACACTAGCGCTGGGAAAGGTATGTGGG
AGTTTTGTGTAG
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