mRNA_H-elongata_contig12485.1871.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12485.1871.1
Unique NamemRNA_H-elongata_contig12485.1871.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI)

HSP 1 Score: 664 bits (1714), Expect = 2.240e-235
Identity = 333/376 (88.56%), Postives = 354/376 (94.15%), Query Frame = 1 
Query:   37 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            +QL K GFFS+ +F  LPL+   L+AL  L+F + TK+QA  IPPLLAGED+VGAAKTGSGKTLAF++PVLE LHKVKWS+RNGT CIIISPTRELSLQTYGVLRD +E G +KQTHGLLIGGANRRAEAERLVKGVN+LVVTPGRLLDHLQNTKGFLFRNMQ+LVIDEADRILEQGFEEEMH IIKLLPKERQTMLFSATQTKKVEDLARLSI+NKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKN KKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIP VDWIIQ+DPPDQTAEYIHRVGRTARGQSG+GRALLFLLPEEVGFLR+L
Sbjct:  136 QQLVKTGFFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYL 511
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA)

HSP 1 Score: 610 bits (1574), Expect = 2.310e-213
Identity = 306/388 (78.87%), Postives = 342/388 (88.14%), Query Frame = 1 
Query:    7 GAASGPQASEEQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKM--KQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            G A+   A+     K GFFSE +F  LPL+     ALK L+F   TK+QA  IPPLL+G+DLVGAAKTGSGKTLAF++PVLE+L KV W  R GT C++ISPTRELSLQTYGVLRD  EAG    + THGLLIGGANRRAEAERL+KGV ILVVTPGRLLDHLQNTKGF+F NMQ+LVIDEADRILEQGFEEEMH IIK+LP+ERQTMLFSATQTKKVEDLARLSI++KP+YVGVDDAEQESTV+GLEQGYVVCPS+KRFLLLFTFLKKN  KK+MVFFSSCNSV +H+ELLNYID+PVM+IHGRQKQQKRTT+FFQFC+Q+TG+LLCTDVAARGLDIP VDWIIQYDPPDQTAEYIHRVGRTARG +G GRALLFLLP+EVGFLR+L
Sbjct:  182 GQAAPAAAASGSTGKKGFFSEERFDSLPLSAGTQAALKDLNFVTMTKIQAQAIPPLLSGQDLVGAAKTGSGKTLAFLLPVLEMLEKVMWGGRQGTACVVISPTRELSLQTYGVLRDLCEAGAGGGRHTHGLLIGGANRRAEAERLMKGVAILVVTPGRLLDHLQNTKGFVFHNMQMLVIDEADRILEQGFEEEMHQIIKILPRERQTMLFSATQTKKVEDLARLSIRDKPIYVGVDDAEQESTVEGLEQGYVVCPSEKRFLLLFTFLKKNRNKKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYL 569
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA)

HSP 1 Score: 564 bits (1453), Expect = 3.870e-197
Identity = 282/376 (75.00%), Postives = 324/376 (86.17%), Query Frame = 1 
Query:   37 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            E+  +PGFFS+  F  L L++    AL    +   TK+QA +IPPLL G+DL+GAAKTGSGKTLAF++P +ELL +V+++ RNGTG I+ISPTREL+LQ YGVLR+  E     QTHGL+IGGANRR EAE+L KGVNILV TPGRLLDHLQNT+GF FRN+Q+LVIDEADRILEQGFEE+MHAIIK LPK RQT+LFSATQT+KVEDLARLSI+  PVYVGVDD ++ STV GLEQGYVVCPS  RFLLLFTFLKKN K+K+MVFFSSCN+VK+H+ELLNYIDVPVMDIHGRQKQQ+RT++FFQFCK DTG+LLCTDVAARGLDIP VDWI+QYDPPDQ AEYIHRVGRTARG SG GRALLFL PEEVGFLR+L
Sbjct:   47 EKKHRPGFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCE--HHNQTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNTRGFNFRNLQMLVIDEADRILEQGFEEDMHAIIKTLPKTRQTVLFSATQTRKVEDLARLSIEGDPVYVGVDDGDRVSTVQGLEQGYVVCPSANRFLLLFTFLKKNRKRKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYL 420
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA)

HSP 1 Score: 561 bits (1446), Expect = 2.120e-193
Identity = 280/369 (75.88%), Postives = 318/369 (86.18%), Query Frame = 1 
Query:   58 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            FF+   F DLP++D    ALK L F   T +Q+  IPPLLAG+D+V AAKTGSGKTLAF++PV+ELL KVKW+ RNGTG IIISPTRELS+Q YGVLRD  + G    THGL++GGANRRAEAERLVKGV+ILV TPGRLLDHLQNTKGFL RN+Q+LVIDEADRILEQGFEE+MH IIK LPK RQTMLFSATQTKKVEDL RLS++ +PV+VG  +    +TV GLEQGYVVCPSDKRFLLLFTFLK+N ++KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+QD G+LLCTDVAARGLDIP VDWIIQYDPPD   EYIHRVGRTARG +G+GRALLFL  EEVGFL++L
Sbjct:  241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYL 609
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA)

HSP 1 Score: 543 bits (1398), Expect = 2.150e-188
Identity = 277/384 (72.14%), Postives = 315/384 (82.03%), Query Frame = 1 
Query:   25 QASEEQLAKPGFFSETK----FGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            +A+E    KP FF+ +     F  LPLTD    AL  L F   T++QA +IP LLAG+D+VGAAKTGSGKTLAF+IPV+ELL K K++ R GTG I+ISPTRELSLQ YGVLRD + +G   QTHGL+IGGANR+ EA++L KGVNIL+ TPGRLLDHLQNT  F++ NM  LVIDEADRILEQGFEE+M AI++LLPK+RQTMLFSATQTKKVEDLARLSI++  VYV V    + +T  GLEQG+V CPSDKRFLLLFTFLKKN KKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTT+FFQF K  TG LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG +G GRALLFL PEE GFL++L
Sbjct:   64 KATESSSEKPNFFAHSDDKGLFTALPLTDATQKALAELSFTRMTQIQAQSIPSLLAGKDIVGAAKTGSGKTLAFLIPVIELLFKAKFTTRRGTGAIVISPTRELSLQIYGVLRDLITSGGHNQTHGLIIGGANRKTEADKLGKGVNILIATPGRLLDHLQNTSRFVYHNMLCLVIDEADRILEQGFEEDMRAILRLLPKQRQTMLFSATQTKKVEDLARLSIQSSAVYVEVASETKLATAAGLEQGFVTCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYL 447
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA)

HSP 1 Score: 538 bits (1386), Expect = 3.070e-186
Identity = 269/378 (71.16%), Postives = 314/378 (83.07%), Query Frame = 1 
Query:   49 KPGFFS-----ETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKP-VYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            KP F++     + +F  LPL++   TAL  + F   T++QA +IPPLLAG+DL+GAAKTGSGKTLAF++P++ELLH  K+ +RNGTG I+ISPTREL++Q YGV +D   +GK +QT+GL++GGANRR EAERL KGVNI++ TPGRLLDHLQNTKGF+FRN+   V+DEADRILEQGFEE++ AIIK LPK+RQTMLFSATQTKKVEDLAR +I +K  +YV V +    +T  GLEQGYV  PSD+RFLLLFTFLKKN  KKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G GRALLFL PEE GFLR+L
Sbjct:   90 KPNFYAGKDGADDRFSTLPLSENTQTALSAMGFTRMTQIQAMSIPPLLAGKDLIGAAKTGSGKTLAFLLPIVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCSSGKHQQTYGLIMGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEEDLRAIIKALPKQRQTMLFSATQTKKVEDLARTAIDHKSAIYVEVPNETSLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYL 467
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A484E1C0_BRELC (RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E1C0_BRELC)

HSP 1 Score: 537 bits (1384), Expect = 3.270e-186
Identity = 267/376 (71.01%), Postives = 319/376 (84.84%), Query Frame = 1 
Query:   37 EQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            E +    +FS   F  LPL++    AL  + F+  TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG +G+G+ALL LLP+E+GFL++L
Sbjct:   74 ESIVDKRYFSSEDFSSLPLSEPTRKALTDMGFSKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKDKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNTKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGANGKGKALLMLLPDELGFLKYL 447
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A0W8CWR6_PHYNI (RNA helicase n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8CWR6_PHYNI)

HSP 1 Score: 535 bits (1379), Expect = 5.740e-186
Identity = 266/369 (72.09%), Postives = 315/369 (85.37%), Query Frame = 1 
Query:   58 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            +FS  +F  LPL++    AL  + F   TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLP+E+GFL++L
Sbjct:  102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYL 468
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: H3G649_PHYRM (RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3G649_PHYRM)

HSP 1 Score: 531 bits (1368), Expect = 1.190e-185
Identity = 264/363 (72.73%), Postives = 311/363 (85.67%), Query Frame = 1 
Query:   76 FGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            F  LPL+D    AL  + F+  TK+Q+ +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +     QTHG+++GGANRRAEAERL KGVNIL+ TPGRLLDHLQNTK F++ N+QILVIDEADRIL  GFEEEM  IIK +PKERQTMLFSATQTKKVEDLARLSIK KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLP+E+GFL++L
Sbjct:    3 FASLPLSDPTRKALADMGFSKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLAKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYL 363
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BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Match: A0A5D6YCV7_9STRA (RNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCV7_9STRA)

HSP 1 Score: 536 bits (1382), Expect = 1.730e-185
Identity = 268/369 (72.63%), Postives = 315/369 (85.37%), Query Frame = 1 
Query:   58 FFSETKFGDLPLTDTALTALKTLDFAIATKVQA-TIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCIIISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNILVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL 1161
            +FS   FG LPL++    AL  + F   TK+QA +I PLLAG+DL+GAAKTGSGKTL+F+IP +ELLHKVK++ R GTGCI+ISPTREL+LQ YGV+R+  +     QTHG+++GGANRRAEAERLVKGVNIL+ TPGRLLDHLQNTK F++ N+Q+LVIDEADRIL  GFE+EM  IIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC +VKF+ ELLNYID+PVMDIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLPEE+GFL++L
Sbjct:  111 YFSAEDFGSLPLSEPTKKALADMGFEKMTKIQAKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVKFTARKGTGCIVISPTRELALQIYGVVREICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFVYHNLQVLVIDEADRILSIGFEDEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKDKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCAAVKFYGELLNYIDIPVMDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPEELGFLKYL 477
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12485.1871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL1_ECTSI2.240e-23588.56RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZG10_9STRA2.310e-21378.87RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S1XXW2_9STRA3.870e-19775.00RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430... [more]
W7U0G2_9STRA2.120e-19375.88RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2KTK2_9STRA2.150e-18872.14RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=... [more]
A0A7S2PMU9_9STRA3.070e-18671.16RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]
A0A484E1C0_BRELC3.270e-18671.01RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 Re... [more]
A0A0W8CWR6_PHYNI5.740e-18672.09RNA helicase n=13 Tax=Peronosporaceae TaxID=4777 R... [more]
H3G649_PHYRM1.190e-18572.73RNA helicase n=2 Tax=Peronosporaceae TaxID=4777 Re... [more]
A0A5D6YCV7_9STRA1.730e-18572.63RNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12485contigH-elongata_contig12485:1860..8574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score672.9
Seed ortholog evalue8.7e-191
Seed eggNOG ortholog2880.D7FJL1
Preferred nameDDX18
KEGG koko:K03254,ko:K13179
KEGG Pathwayko03013,map03013
GOsGO:0000288,GO:0000291,GO:0000462,GO:0000463,GO:0000470,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016032,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016442,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019058,GO:0019068,GO:0019072,GO:0019074,GO:0019222,GO:0019439,GO:0019904,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0030684,GO:0030686,GO:0030687,GO:0031323,GO:0031326,GO:0031332,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032991,GO:0033962,GO:0034248,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0042274,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990417,GO:1990904,GO:2000112
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0342@2759
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03012,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_006510.1
Exons10
Model size1161
Cds size1161
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12485.1871.1prot_H-elongata_contig12485.1871.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12485 1860..8574 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929737.2062144-CDS-H-elongata_contig12485:1859..20161622929737.2062144-CDS-H-elongata_contig12485:1859..2016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 1860..2016 +
1691679138.4201992-CDS-H-elongata_contig12485:1859..20161691679138.4201992-CDS-H-elongata_contig12485:1859..2016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 1860..2016 +
1622929737.2230685-CDS-H-elongata_contig12485:2541..26331622929737.2230685-CDS-H-elongata_contig12485:2541..2633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 2542..2633 +
1691679138.4298573-CDS-H-elongata_contig12485:2541..26331691679138.4298573-CDS-H-elongata_contig12485:2541..2633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 2542..2633 +
1622929737.236375-CDS-H-elongata_contig12485:4894..50601622929737.236375-CDS-H-elongata_contig12485:4894..5060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 4895..5060 +
1691679138.437103-CDS-H-elongata_contig12485:4894..50601691679138.437103-CDS-H-elongata_contig12485:4894..5060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 4895..5060 +
1622929737.2562814-CDS-H-elongata_contig12485:5417..54911622929737.2562814-CDS-H-elongata_contig12485:5417..5491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 5418..5491 +
1691679138.4442575-CDS-H-elongata_contig12485:5417..54911691679138.4442575-CDS-H-elongata_contig12485:5417..5491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 5418..5491 +
1622929737.270638-CDS-H-elongata_contig12485:5857..60161622929737.270638-CDS-H-elongata_contig12485:5857..6016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 5858..6016 +
1691679138.4542358-CDS-H-elongata_contig12485:5857..60161691679138.4542358-CDS-H-elongata_contig12485:5857..6016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 5858..6016 +
1622929737.2845447-CDS-H-elongata_contig12485:6324..64201622929737.2845447-CDS-H-elongata_contig12485:6324..6420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 6325..6420 +
1691679138.463922-CDS-H-elongata_contig12485:6324..64201691679138.463922-CDS-H-elongata_contig12485:6324..6420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 6325..6420 +
1622929737.2966175-CDS-H-elongata_contig12485:6981..70621622929737.2966175-CDS-H-elongata_contig12485:6981..7062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 6982..7062 +
1691679138.4734068-CDS-H-elongata_contig12485:6981..70621691679138.4734068-CDS-H-elongata_contig12485:6981..7062Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 6982..7062 +
1622929737.3168097-CDS-H-elongata_contig12485:7537..76721622929737.3168097-CDS-H-elongata_contig12485:7537..7672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 7538..7672 +
1691679138.4828131-CDS-H-elongata_contig12485:7537..76721691679138.4828131-CDS-H-elongata_contig12485:7537..7672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 7538..7672 +
1622929737.3325086-CDS-H-elongata_contig12485:7867..80191622929737.3325086-CDS-H-elongata_contig12485:7867..8019Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 7868..8019 +
1691679138.491771-CDS-H-elongata_contig12485:7867..80191691679138.491771-CDS-H-elongata_contig12485:7867..8019Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 7868..8019 +
1622929737.350407-CDS-H-elongata_contig12485:8525..85741622929737.350407-CDS-H-elongata_contig12485:8525..8574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 8526..8574 +
1691679138.5011632-CDS-H-elongata_contig12485:8525..85741691679138.5011632-CDS-H-elongata_contig12485:8525..8574Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12485 8526..8574 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12485.1871.1

>prot_H-elongata_contig12485.1871.1 ID=prot_H-elongata_contig12485.1871.1|Name=mRNA_H-elongata_contig12485.1871.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp
AGGAASGPQASEEQLAKPGFFSETKFGDLPLTDTALTALKTLDFAIATKV
QATIPPLLAGEDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRNGTGCII
ISPTRELSLQTYGVLRDFVEAGKMKQTHGLLIGGANRRAEAERLVKGVNI
LVVTPGRLLDHLQNTKGFLFRNMQILVIDEADRILEQGFEEEMHAIIKLL
PKERQTMLFSATQTKKVEDLARLSIKNKPVYVGVDDAEQESTVDGLEQGY
VVCPSDKRFLLLFTFLKKNTKKKIMVFFSSCNSVKFHSELLNYIDVPVMD
IHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPHVDWIIQYDPPD
QTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRHL
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mRNA from alignment at H-elongata_contig12485:1860..8574+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12485.1871.1 ID=mRNA_H-elongata_contig12485.1871.1|Name=mRNA_H-elongata_contig12485.1871.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6715bp|location=Sequence derived from alignment at H-elongata_contig12485:1860..8574+ (Himanthalia elongata Himel1 dioecious)
GCTGGAGGGGCGGCATCAGGTCCCCAGGCTTCAGAAGAGCAGCTGGCGAA
GCCTGGCTTCTTCTCCGAAACGAAATTCGGTGATCTTCCGTTAACCGATA
CCGCACTAACTGCCCTGAAAACCTTGGACTTCGCCATCGCGACCAAAGTA
CAGGCGAGTCAAAAACGAAATCTGACAGCCTCGTTTCAACGTTAACTAAG
AAGTACAGTAATATTGTTGACTCCGACCATCTTGCTATTGTATACTCTAA
TTAGAAGTATTATTTACTAGTTCTCTACTCGGTTCAAATTGACAATTGAC
AGCGATGGGACACCATCTCTAATAATAGTGGTAGTGTTTCCGGGACATAC
CTGCCAATGGGTGATTAGAGGGATCAGGGATCTTCATTGAAGGAATCAAT
CGTTGTAAACTTGTCTTAAACTAACATCAAAATTTTCTTCCACGTTATAG
CAGTATCAGGGTCATACTATATCATACTATACCATACCATACCGTAGAGT
TATAGCGGGAATCCCAACTGCAGCATCTCTCAGAACCAAGGGTAAAAGTG
ATGAGCGCAAGTTAAAAAAGAAAAAAGTCTACCTTCCTCTCATCAGCTCT
CACATACCATACCATACTATACCATACCGTGGGTGTATTTGTTATTGAAC
ATTATGTTGCACTCTGGTGCTGCAGGCGCAAGCAATTCCTCCTCTGCTGG
CCGGAGAAGACTTGGTTGGGGCAGCCAAGACAGGGTCGGGCAAGACCCTG
GCCTTCATCATTCCTGTCCTCGAGGTGAAAAATGTTTTATTTACAGTACC
TAAAATAGTGTTATTTGTTGTTTCTCACAAGAGCAAATAGGACGTCCGCC
GGAGGAGTGTTTCGTGCTTCGATGCCGAGGTCAACCAGGTCATGTTCGCT
GATAGCGCCCAAACTAATGCAGATCATAGCAACGAACCTTAAAAACCAAC
GCGAAATATATAATACCTATGTTAGTATGTTATTCATAGTATGTTATTAT
TAGTATGTTATTCATAGTATGTTATTGTTAGTATGTTATTATTAGTGTTA
TTATTAGTATGTTATTAATAGTATGCCAGTGTGTATACCGTTAGTACGAG
AATGAAAATCAAACATGGGTGCTCGGAGGGTTTGAATGAGTTTTTAAAGA
TTTATGCGGACAAGGAGACGCTGAAGTATCATTACCGTATATTGTTGGAT
ATTGTCACTTACAAGTAATGGCGAGGTTTGTACAATGTGCACTGTGAGCT
CGATACCTCGGTCGAAGAGTATTGTCCCTCTCTATCTCTGTATATCCCTC
TCTATCTCACATCACATTCATCACATTCGATACTAGTAATAGTCAATAGG
ATGTCTTCTAAAAAGTAGGTTGTTGGAAAGAGCACTAGTGAAATTAAAGT
ATGACTGTGTTACACATATGAACACTTACCTGGTGCAGTCATACCGTTGT
CTATACGGCGTGGGTGTGGCACTTATTATGCCTTCACCCGATCAAAATAT
ATTTTCTCCCCTTCGAGGATAATCGATAACGGCGACGGTAACGGTAACGG
TACACCCTATCATCCTATTATCCTATTATCCTATTATCCTATAACCCTAT
AACAGTAATAGTAATAGTAAAAGGCAGACTTGCCGGCTACATTATTGGGG
TGTCACAGCATATGTTCACCATAATGAATAATGATACCCCGTCAGTCTAA
AGCAGCCCCCTGGGATACTTGAAGTTCAGCTTTTTGCAGTAAATCACTGC
CGTCAATCAATTTTTGTAGAATTTGAGCCTATTTGACGGTTGTAGAAATC
TCAAAAATGCTTTGTGCACAGTTCCTTCGTCTCTCTTTACACTACACTGC
TATACGTTACTCTACACTACACTGCTGTTGTACACGGTGTAATACACTAT
ACACTACTAAACGAGTATCAGATTGGCGAGGTAGACATAATCGACCATCT
ATTAATAGACCCAACCCGACAAAATCACTAATAATATAGCGGCCGCTCAA
GACGGATAGATATCCCACCGAAGACATGATAGATGCCCCACCGAAGACAT
ATTATTTTTGTTTAAAAGACTTTAGGCTCATTCTAACTATTAGATACATC
ACCGAAGACATGATAGATACCCCACCGAAGACATGATAGATGCCCCACCG
AAGACATGATAGATGCCCCACCGAAGACATGATAGATACCCCACCGAAGA
CATGATAGATACCCCACCGAAGACATGATAGATACCCCACCGAAGACATT
GTTATTACCTTGGTCTAGATAATAAATACCGGGGCAGCTTGGCTGTTGAT
GCTCATAAATTCACGTTTCGGTGATCGTCGTTGATTACATATTACATTCC
ATACATACCTATACATACATACATATACATATATCTCCTTGGCCCACCCC
AAGAGGTATTATATTATAGTATTAATAGTAGTAGACCAAGGAAAGAGTGC
TCCTTGCGAAGTACCCTGGTAGATATATAATAATTCATATGATCGTATTT
GACGAGGTATATCTTGCATCCTGGAGGTCTGAGCTACCACCGCCTCCGAT
ACTGTAATTTCTGTGTCTACTGTATCGCACATGCTGTTGTTGTGTCTACT
GTACCAATAGTGGTTGTGGGAAAAGAGAGGCGTCCAATAATTGGTCCATG
CGGTTACCTCAATAGACTGCTGGCGAACTTCGCCATCGCTACGCAATCGC
GTAACCTGATGAACTCGGGATTGGCCCGATGGTCGTTGACGGTAGAGATG
GACACCGTTGCGTAAAGGAGAGAATCCCGGGAGTATTCAGTCTGGGTGGG
GAGAATGATAGGGCTGACACAAGACGGGACGGCCGAACCCGTCTCGCGAG
ACCAAATTCTCAGGCACAAATGGGGAGAGGAAACATTATTTTTCCCTGCT
GGCCAACCACAGGCAGGCCGTCAACCAAATCCGGTTGATAGACACACTCT
GTTATAATATTATGACCACAAAACACTCGACACTATTAATACCATTGCTA
TGTATTTTGACAACGCTCAATGCTCAATGCCTCAGCTGCTGCACAAAGTG
AAGTGGTCTAATCGGAATGGAACGGGGTGTATCATCATCAGCCCCACGCG
AGAGCTGTCACTGCAAACGTACGGTGTGCTGAGAGACTTCGTAGAGGCTG
GCAAGATGAAGCAGACTCATGGTTTGCTGATTGGGGGAGCAAACCGAAGA
GGTGAAATGAAGTGAAGTGAAGAATCAACAATCGACAATCGACAACTTTC
TTGAAAATGTATAACATTTTTTTCTTCGAATAATGAAAATACTAGTAATA
TTGCATAGGCTCTATCGGAATTCAAAATTCAGAGAACGGGCAAAAAAATA
TCAATTGCAAGTTTTTTTTAAGAAACGAGAGGAATCAACAGTTTCACTAT
GTGTTGTTAATAGACTTACACACTGACACATTGACATTTAGAGCAAGCTT
TGACCCAACCGCCACCGCAACGGCCTTCGGGATACCGTCTGTACATGGGA
TACACCGGATATCCTTGGCTTCGGACGATTTCTCTGGCTCTGGCTCTGGC
TCTGGCAGCTGAAGCCGAGCGTCTGGTGAAGGGCGTTAATATCCTCGTGG
TTACCCCTGGTCGTCTCCTCGACCACCTGCAGGTTAGAAATGTAATGCAG
TGTAGTGTAGTGTAGTGTAGTACTAATATTTTCGGGAAATGTAATTAATT
TGACTCTGCTCTCTTGTGTTTCAAAAATCTCCCAAACAAGTTTGGTTGGC
TTCTTGCACCTGATAATAATCAGCATGATAATAATCAGCATGATCAGCAT
GATAGCAGTCTTTAGTTCGTGGTTGATAAGCATGATAGCATAACGTGGAC
CGCTCGCAACATGACTCGGAGGGGATGTCGCGCGACTTTTGAGATCGGCC
TTTAGTTGGACATTATTCGTCGGTTTAGAATCACATGACCCCGAGCTCTT
CCTTATCCTTATCCTTATCCTTCTCGTTATTGCACCTCTGTCCCCCAGAA
CACAAAGGGCTTTCTCTTCCGCAACATGCAAATTTTGGTCATCGATGAGG
CTGATCGAATCTTGGAGCAAGGATTTGAGGAGGAAATGCATGCGATCATC
AAACTCCTCCCGAAAGAGAGGCAAACCATGCTCTTCAGTGCAACTCAGAC
CAAAAAGGTAACCTATTTTATTAAGGTATTAATATAGTCATAAATAATGC
CGTACCGTGGTACGATACCGTGGTACAATCTGCCTATGCGCCAGACACGT
CTCCTATCAGCAGTTGGATCCATACGCTTGGTGCACATTCATGTTGAGAG
TACGCGAAGGCACATCATGCCGATGGTTTTTGAGCTTCGAGTGTTTATCC
CTACCGTACGAAGTCAAATCGTTAACCCAGGGACTCGCGTTGAACAGCCT
AAATTTGAGTTATATCACGTGTACAAGCCGGTGTAGGTCAAAATGATTAT
GTATTGTCGACACAGGTGGAGGACTTAGCACGGCTTTCGATAAAGAACAA
GCCCGTCTACGTTGGAGTAGATGATGCCGAACAAGAAAGCACAGTAGACG
GACTTGAGCAGGTGAGGCTGCCCGGATGGGTTGTTATTTAAAAAACACAC
TAAACGCTCGTGTGGTCCTATTTAAAAGTCTTTTATAATGTTAATAGTAA
ATGCCTTTACAGACAAAAACAAAGGTCAATGTTAAGACAGGCAATGACAG
TATGATAAGTGCCACAATACAATGGAGGGAGGATGCGGAAGGGATGCTAT
CAATATCTATATAAACTATAGTATTTTGATGGGTGAGGGGTAGGGTAATC
ATATTCTTAGATCTTGATGACTTGAGTGTTTTGTTGATCGTTCGCTCGTT
TGTTTGTTGGGTCATTCCCTCTGCTAATTACTCTTTAGTGCCGGTGGAGC
TCTCTCACACGAATGACCGTATTTGGGAGTTGATCACGGTTCGGAAAGCC
TGGCACCTTCTTCTGAGCAGCCCGTCAGATGGCTGTTATGTCAGCAGTCT
TAAATATACTATTATATAATCAAAGTTGTCGAGAGAACGCATCAAATGGT
AAGTAGCCATGTTACACGTCTAATACTCTGTCGTCACTGCGTTTACCCAT
TCTTTGTTGTACTTGTCTGTAGGGATACGTGGTATGCCCGAGCGACAAAC
GCTTCCTGCTGCTGTTCACGTTTCTCAAGAAAAACACAAAGAAAAAGATC
ATGGTGAGCTATATTTTACTATATTATGTTATTATGTTAATATTATGTTC
GATAGTAGATCAAACTAGGAGAGTAAATCATGCTGGGATAGATCATGGTG
AGATGTGACAATATTGATGGCTGTCAAATACAAACGTACAAAAGTATATG
CTAGCGCACAGTCTGGTGCATAAAATACTTGTGGTCCGCAAAATAGGTGA
TGGCATGGTGCATGGTACATAGTGCAACGTGATGGCGTCCTTTAATTCCG
GTACAGTAGGAACTGCTTGCTAAGTTTCCTCCGCGAAGCGAACAGATGGA
TGGATCTTTCTTCTCGGCTCCTGTTACTAATGCTGCAGATTCAACCCCAT
CCCCATCCCTAACCCCATCCCCATCCCCATCCCTAACCCCTCTAAGCTAT
AAGCTATAAGCTATAAGCTCTAAGCTCTAGATATGAACATGAACATGAAC
ATGGACGTTCAACATAAACATTCAACAGGTGTTTTTCTCTTCGTGTAACT
CCGTCAAGTTCCACTCGGAACTGCTGAACTACATCGATGTTCCTGTGATG
GATATACACGGTCGCCAGAAGCAACAAAAGCGCACCACTTCCTTCTTTCA
GTTCTGCAAACAGGTGCCGCTGTTGCTGCCGCCGCTGGCGGGGTGGATAT
TCAAAGTGAACTTCGTCTTAATATTTTACTGTTATTGAAATGAAATCATC
GCGCATCACGCTGTGAAATGCAGTAGTATTATGTAATAGATTAGATTGAA
TTGGGTCTGTCTGTGTAACGGTTGTCCGCTATCTTGGTTCTGTGTAACGG
TTCCCCAGGATACGGGAGTATTACTCTGCACGGACGTGGCAGCACGCGGA
CTCGACATACCCCATGTGGACTGGATCATACAGTACGATCCTCCCGATCA
AACCGCAGAGTACATCCACAGGGTCGGTCGAACAGCCAGAGGACAAAGCG
GACAGGGCAGGTGAAGTCTGGTGACTCCGCATACCTATTATAAATAGTAT
AGTATAGTTTAGTATAGCTTCAGCACATTATAGTACAGTATAGTATAGTA
CAGTATAGTATAGTACCTCAAATTCGTGCTGTGTTGTCTCTTCTACCCCG
GTGCTGCGTTGTAATGATCGACTAATGCTATATTGTTCATAACCCTCGAG
ATGACGGTTGACAGAGTCGTGACTATAGAGTCGGGTGGTCGTCTCGTACG
ACTCGAAAAATGCGTAGACATTGTGCCATCAGTATCCTTGTTTTTCGTGA
TCCCATGAGATTGGCTTCTATCATGATTACATGACTTCGAACCATCCTCT
CTGGTGTTCCTGTTGGTGTTGGTGTTCCTGTTGGTGTGCCATCAGTATCC
TTGTTTTTCGTGATCCCATGAGAATGGCTTCTATCATGATTACATGACTT
CGAACCATCCTCTCTGGTGTTCCTGTTGGTGTTGGTGTTCCTGTTGGTGT
TGCTGTTGCCGATCAGGGCTTTGTTGTTCCTGCTGCCGGAAGAAGTAGGC
TTCTTACGCCATCTT
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Coding sequence (CDS) from alignment at H-elongata_contig12485:1860..8574+

>mRNA_H-elongata_contig12485.1871.1 ID=mRNA_H-elongata_contig12485.1871.1|Name=mRNA_H-elongata_contig12485.1871.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2322bp|location=Sequence derived from alignment at H-elongata_contig12485:1860..8574+ (Himanthalia elongata Himel1 dioecious)
GCTGGAGGGGCGGCATCAGGTCCCCAGGCTTCAGAAGAGCAGCTGGCGAA
GCCTGGCTTCTTCTCCGAAACGAAATTCGGTGATCTTCCGTTAACCGATA
CCGCACTAACTGCCCTGAAAACCTTGGACTTCGCCATCGCGACCAAAGTA
CAGGCGAGCTGGAGGGGCGGCATCAGGTCCCCAGGCTTCAGAAGAGCAGC
TGGCGAAGCCTGGCTTCTTCTCCGAAACGAAATTCGGTGATCTTCCGTTA
ACCGATACCGCACTAACTGCCCTGAAAACCTTGGACTTCGCCATCGCGAC
CAAAGTACAGGCGACAATTCCTCCTCTGCTGGCCGGAGAAGACTTGGTTG
GGGCAGCCAAGACAGGGTCGGGCAAGACCCTGGCCTTCATCATTCCTGTC
CTCGAGCAATTCCTCCTCTGCTGGCCGGAGAAGACTTGGTTGGGGCAGCC
AAGACAGGGTCGGGCAAGACCCTGGCCTTCATCATTCCTGTCCTCGAGCT
GCTGCACAAAGTGAAGTGGTCTAATCGGAATGGAACGGGGTGTATCATCA
TCAGCCCCACGCGAGAGCTGTCACTGCAAACGTACGGTGTGCTGAGAGAC
TTCGTAGAGGCTGGCAAGATGAAGCAGACTCATGGTTTGCTGATTGGGGG
AGCAAACCGAAGAGCTGCTGCACAAAGTGAAGTGGTCTAATCGGAATGGA
ACGGGGTGTATCATCATCAGCCCCACGCGAGAGCTGTCACTGCAAACGTA
CGGTGTGCTGAGAGACTTCGTAGAGGCTGGCAAGATGAAGCAGACTCATG
GTTTGCTGATTGGGGGAGCAAACCGAAGAGCTGAAGCCGAGCGTCTGGTG
AAGGGCGTTAATATCCTCGTGGTTACCCCTGGTCGTCTCCTCGACCACCT
GCAGCTGAAGCCGAGCGTCTGGTGAAGGGCGTTAATATCCTCGTGGTTAC
CCCTGGTCGTCTCCTCGACCACCTGCAGAACACAAAGGGCTTTCTCTTCC
GCAACATGCAAATTTTGGTCATCGATGAGGCTGATCGAATCTTGGAGCAA
GGATTTGAGGAGGAAATGCATGCGATCATCAAACTCCTCCCGAAAGAGAG
GCAAACCATGCTCTTCAGTGCAACTCAGACCAAAAAGAACACAAAGGGCT
TTCTCTTCCGCAACATGCAAATTTTGGTCATCGATGAGGCTGATCGAATC
TTGGAGCAAGGATTTGAGGAGGAAATGCATGCGATCATCAAACTCCTCCC
GAAAGAGAGGCAAACCATGCTCTTCAGTGCAACTCAGACCAAAAAGGTGG
AGGACTTAGCACGGCTTTCGATAAAGAACAAGCCCGTCTACGTTGGAGTA
GATGATGCCGAACAAGAAAGCACAGTAGACGGACTTGAGCAGGTGGAGGA
CTTAGCACGGCTTTCGATAAAGAACAAGCCCGTCTACGTTGGAGTAGATG
ATGCCGAACAAGAAAGCACAGTAGACGGACTTGAGCAGGGATACGTGGTA
TGCCCGAGCGACAAACGCTTCCTGCTGCTGTTCACGTTTCTCAAGAAAAA
CACAAAGAAAAAGATCATGGGATACGTGGTATGCCCGAGCGACAAACGCT
TCCTGCTGCTGTTCACGTTTCTCAAGAAAAACACAAAGAAAAAGATCATG
GTGTTTTTCTCTTCGTGTAACTCCGTCAAGTTCCACTCGGAACTGCTGAA
CTACATCGATGTTCCTGTGATGGATATACACGGTCGCCAGAAGCAACAAA
AGCGCACCACTTCCTTCTTTCAGTTCTGCAAACAGGTGTTTTTCTCTTCG
TGTAACTCCGTCAAGTTCCACTCGGAACTGCTGAACTACATCGATGTTCC
TGTGATGGATATACACGGTCGCCAGAAGCAACAAAAGCGCACCACTTCCT
TCTTTCAGTTCTGCAAACAGGATACGGGAGTATTACTCTGCACGGACGTG
GCAGCACGCGGACTCGACATACCCCATGTGGACTGGATCATACAGTACGA
TCCTCCCGATCAAACCGCAGAGTACATCCACAGGGTCGGTCGAACAGCCA
GAGGACAAAGCGGACAGGGCAGGATACGGGAGTATTACTCTGCACGGACG
TGGCAGCACGCGGACTCGACATACCCCATGTGGACTGGATCATACAGTAC
GATCCTCCCGATCAAACCGCAGAGTACATCCACAGGGTCGGTCGAACAGC
CAGAGGACAAAGCGGACAGGGCAGGGCTTTGTTGTTCCTGCTGCCGGAAG
AAGTAGGCTTCTTACGCCATCTTGGCTTTGTTGTTCCTGCTGCCGGAAGA
AGTAGGCTTCTTACGCCATCTT
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