mRNA_H-elongata_contig124678.1862.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI) HSP 1 Score: 303 bits (777), Expect = 2.860e-97 Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 1
Query: 10 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGL 492
NIVKVVAGWGHSAALT DGQLYVCGRNYQGQLGLG+PQ FPQNERGHPFQADFCLIDRL HLKI+QIACGGEHSVAVA+NGEVWSFGAGQKGQLGHESTTRED+PRLVQALK TRREI+HVACGNNCTLVLAGGVAFP+LFE A+V+RGNP+L DV L
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVVRGNPRLWEDVESL 652
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.360e-96 Identity = 145/161 (90.06%), Postives = 153/161 (95.03%), Query Frame = 1
Query: 10 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGL 492
NIVKVVAGWGHSAALT DGQLYVCGRNYQGQLGLG+PQ FPQNERGHPFQADFCLIDRL HLKI+QIACGGEHSVAVA+NGEVWSFGAGQKGQLGHESTTRED+PRLVQALKRTRREI+HVACGNNCTLVLAGGVAFP+LFE AAV+RGNP+L DVG L
Sbjct: 879 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTAAVVRGNPRLWEDVGSL 1039
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: F0Y909_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y909_AURAN) HSP 1 Score: 199 bits (507), Expect = 3.990e-60 Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 19 KVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGLV 495
+VVAGWGH+A LT +G YVCGRN+QGQLGLG+P+ FP NERGHP+Q DF L+DRL ++ QIACGGEHSVA+ ++GEV S GAG KGQLGH + E +PR+V LK +RR++L VACGNN TLVL G PSLF+ A VI +P DV ++
Sbjct: 179 RVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACGNNGTLVLCGYFNPPSLFDCCAEVICADPDRFDDVDAIL 337
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA) HSP 1 Score: 204 bits (520), Expect = 6.900e-59 Identity = 93/154 (60.39%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 10 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 471
N+ +VVAGWGHSAALT G++ +CGRN+QGQLGLG+PQ FP+NERGHP+QA F +D+L K+ QIACGGEHSVA+ + G+V++FGAG KGQLGH E +P L+ LK+TRR++ VACGNNCTL+LAG PSL +R VIR P L
Sbjct: 571 NVRQVVAGWGHSAALTVSGEVLICGRNFQGQLGLGDPQDFPKNERGHPYQAQFITLDKLDGQKVIQIACGGEHSVALTECGDVYTFGAGNKGQLGHGGLANEHFPALLTDLKKTRRDVHQVACGNNCTLILAGYFNPPSLLQRCTEVIRSTPAL 724
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA) HSP 1 Score: 197 bits (502), Expect = 8.660e-57 Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 1
Query: 19 KVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVI 453
+VVAGWGH+A LT DG YVCGRN+QGQLGLG+P+ FP NERGHP+Q DF L++ L+ ++ Q+ACGGEHSVA+ +GEV+S GAG KGQLGH S E +PRLV LK TRR++L VACGNN TLVL G P+LF+R A V+
Sbjct: 479 RVVAGWGHTALLTADGACYVCGRNFQGQLGLGDPEAFPHNERGHPYQPDFRLVETLARKRVAQVACGGEHSVALTADGEVYSCGAGNKGQLGHGSGENEQFPRLVARLKATRRDVLEVACGNNGTLVLCGYFEPPTLFDRCAEVL 623
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.840e-56 Identity = 99/157 (63.06%), Postives = 121/157 (77.07%), Query Frame = 1
Query: 13 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVA--DNG-EVWSFGAGQKGQLGHEST-TREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 471
I +VVAGWGHSA LT G++ +CGRNYQGQLGLG+P+ F +NERGHPFQA F ++DRL ++ QIACGGEH+VA+ +NG +V+SFGAG KGQLGH + E++PRLV LKRTRR I VACGNNCT++LAG PSLF+RA VIRG P L
Sbjct: 500 IRQVVAGWGHSAVLTVSGEVLICGRNYQGQLGLGSPEEFQKNERGHPFQAKFEVLDRLDGDRVAQIACGGEHTVALCKEENGSKVFSFGAGNKGQLGHGTPLANENFPRLVIDLKRTRRNIHQVACGNNCTVILAGTFNPPSLFDRAIEVIRGTPGL 656
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.270e-54 Identity = 84/157 (53.50%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 13 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADV 483
+ VVAGWGHSA LT G++Y+CGRN+QGQLGLG+P +FP NERGHPFQ+ F + L HL++RQ++CGGEHSV + EV++FG G +GQLGH + E+YPR ++ + RT R++LH ACGNN TL+L G SL+ IR N L A V
Sbjct: 308 VTDVVAGWGHSAVLTAAGEVYICGRNFQGQLGLGSPDKFPLNERGHPFQSVFVRLHTLGHLRVRQVSCGGEHSVCIDGRNEVYTFGLGAQGQLGHTDSESENYPRRLEVMLRTHRQVLHAACGNNSTLLLTGPTVIRSLYHLCIDAIRKNEVLYALV 464
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: W7TK43_9STRA (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK43_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.970e-50 Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 1
Query: 1 PPQNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLS---HLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 471
PP I KV+AGWGHSA + +G +Y+CGRN+QGQLGLG+P+ F +NER HP+ A F +I L K++Q ACGGEHS A+ +N EV++FGAG +GQLGH + E YPRL Q ++ TRR I VACGNNCT++L G P L E I N L
Sbjct: 230 PPLRIQKVIAGWGHSAVVCGNGDVYICGRNFQGQLGLGDPKNFERNERNHPYLAHFRVITDLQTGGQQKVKQFACGGEHSAALLNNDEVYTFGAGARGQLGHGDSRNEAYPRLNQTMRATRRVIKDVACGNNCTVMLVGAHRIPPLTEYCLEFITQNWSL 389
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A835Z9L6_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L6_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.810e-43 Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 7 QNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQ-----------IACGGEHSVAVADNGE-VWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCT 393
+ +V VVAGWGHSAALT GQLY+CGRNY+GQLGLG+P F QNERGH +QA F ++ LS+ ++ Q I+CGGEHS + G ++SFGAG KGQLGH + E PR V+AL T R +LHVACGNNCT
Sbjct: 534 KGVVAVVAGWGHSAALTASGQLYICGRNYKGQLGLGDPVLFQQNERGHHYQAHFQQLEDLSYERVTQAVLCYAAHTSQISCGGEHSAVITQGGSTIYSFGAGHKGQLGHGNCMNEYRPRRVEALMSTHRTLLHVACGNNCT 674
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S0C718_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C718_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.050e-38 Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 13 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLID-RLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFE 435
+ +V+AGWGHSA +T DG+L+ CGRN+QGQLG G+P N RGHP+Q +F + LS +IR I+CGGEHSV + ++G+++SFG G KGQLG S + YP V + R I+ V GN+ +++L + PSLF+
Sbjct: 23 VSQVIAGWGHSALVTVDGKLFTCGRNFQGQLGRGDPDFSHVNVRGHPYQPEFRRVTGELSGHRIRHISCGGEHSVVLTEDGKLFSFGKGHKGQLGISSCKSQSYPTRVYVPEHRNRPIIQVVSGNDFSIILRKHYSIPSLFD 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig124678.1862.1 >prot_H-elongata_contig124678.1862.1 ID=prot_H-elongata_contig124678.1862.1|Name=mRNA_H-elongata_contig124678.1862.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp PPQNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHback to top mRNA from alignment at H-elongata_contig124678:296..1675+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig124678.1862.1 ID=mRNA_H-elongata_contig124678.1862.1|Name=mRNA_H-elongata_contig124678.1862.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1380bp|location=Sequence derived from alignment at H-elongata_contig124678:296..1675+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig124678:296..1675+ >mRNA_H-elongata_contig124678.1862.1 ID=mRNA_H-elongata_contig124678.1862.1|Name=mRNA_H-elongata_contig124678.1862.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig124678:296..1675+ (Himanthalia elongata Himel1 dioecious)back to top |