mRNA_H-elongata_contig12460.1851.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE) HSP 1 Score: 350 bits (897), Expect = 5.700e-117 Identity = 188/298 (63.09%), Postives = 215/298 (72.15%), Query Frame = 1
Query: 1 KVIRGAWTAEAE-------RSGPGQSGAWTIRRQVVEYHDGGVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFP---------AVPGLRAVASLHGILAPMLPGAGKNP----AAEDAPVG-PRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERLV 831
KVIR AW R S +W+IRR VVEY+DG LQGL+ PEG+G+P+R+PGVILAHTAVG QED ILWKLD IA LGYAAFALDMFG GRALW+RAESL ARRPITEDRSL+Q RA AAVRTL ++EG+D +RLAAVGYCFGGM VLDLARM P L+AVASLHGILAP+ PG G AA+DA + PRVLVLHAT DPFV PEQV+A++EE RR A L +VRYGG A HAFTRPEKT + D AGLSY +A+ DSW+RVV L+E
Sbjct: 71 KVIRAAWAVATTNPDTTNGRGASSSSASWSIRRSVVEYNDGDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPDGDDAGANTPPRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQVRAMEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREEFA 368
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA) HSP 1 Score: 200 bits (509), Expect = 2.030e-59 Identity = 122/253 (48.22%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 70 IRRQVVEYHDG-GVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQAD-LSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKE 822
++RQ+V Y D G+ LQG P E +P V++AHTAVG Q+D +L LD +A LGY AF LDMFGAG+A+WDR +SL AR P+T DRSLL RA AA+ +L GVD+ R+A VGYCFGG+V LD R A G+ A + HGILAP P + + G RVLVLH DPFV P+QV+A + E S++ Y G ARHAFTRPEK + D +AGL YD A W + G L++
Sbjct: 39 LQRQIVPYIDHTGLPLQGFVVRPAAQAA-ESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALDTVR---AGCGIAAAITFHGILAPPPPDQDLS-WCKHYSTGCRVLVLHGGADPFVPPDQVRAFEAEMAAAGVQQCSVIVYDG-ARHAFTRPEKVLDSDRSAGLFYDAAAAEAGWAAMRGCLEQ 285
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP) HSP 1 Score: 200 bits (508), Expect = 2.330e-59 Identity = 115/254 (45.28%), Postives = 151/254 (59.45%), Query Frame = 1
Query: 70 IRRQVVEYHDGGVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILA-PMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERL 828
+++ V Y +GG L G P+ +++P V+L HTAVG QEDF+ WKL+++A LG+ AF DMFG GRALWDR E+L ARR + DR + R AA T+ L VD A+G+CFGGM VLDLAR +P L A S HGIL P LP + + PV +LV H DDPFV E + E + R+++ + Y G A+HAFTRPEKT D +AGL Y+ AD DS +R+ G L+ RL
Sbjct: 36 LKKSSVSYSEGGRELMGEACWPDVGN--QKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLARS-GCMPNLEATVSFHGILDDPDLPD---DYGGREGPVPGEILVCHGEDDPFVSSENLNLFLENLKLRKSNFHLQAYPG-AKHAFTRPEKTEPSDFSAGLFYNEQADRDSSERMKGMLRRRL 282
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC) HSP 1 Score: 179 bits (455), Expect = 3.010e-51 Identity = 110/265 (41.51%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 64 WTIRRQVVEYHDGGVTLQGLHAMPEGDGIPERI----PGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERLV*YSAP 846
WT ++ V Y D G L GL E D +I P V++ TAVG +EDF+ LD A LGY AF +DM+G G A+WD+ S R+P+T DR+ LQ R +AA + L V D +A VGYCFGGM LDLAR VP ++ V S HG+L P K P PV LV H +DDPF+ P+Q QA ++E ++ D I YGG A+H+FTRPEK + D AGL Y ++ S++ L++ +S+P
Sbjct: 42 WTYKQTDVAYQDEGTELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLARA--GVP-MKGVVSFHGVLD--RPAVDKVPGGLSCPV----LVHHGSDDPFISPDQFQAFQQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQDIFPDFSSP 295
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN) HSP 1 Score: 175 bits (444), Expect = 8.590e-51 Identity = 105/211 (49.76%), Postives = 129/211 (61.14%), Query Frame = 1
Query: 202 EDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVP-GLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQA-DLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERL 828
EDF+ WKLD +A GY AF +DMFGAGRALWD+ E+L AR+P+ EDRS + R + A T +E DS R+ A+GYCFGGM VLDLAR +P L+A SLHGIL + P + V +VLV H DPFV PE ++ + + R A DL I Y G ++HAFTRPEKT EGD+AAGL Y ADA SW L L
Sbjct: 1 EDFMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLARS--GLPKSLKATVSLHGILDRL-----DTPPTD---VVGKVLVCHGGSDPFVTPEMLRDFESDMAARNAEDLHIHTYSG-SKHAFTRPEKTTEGDSAAGLYYCELADAASWAAASALLDSCL 200
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A7S1J2W1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2W1_9EUGL) HSP 1 Score: 164 bits (416), Expect = 1.360e-46 Identity = 102/210 (48.57%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 226 DSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAV---------RTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERL 828
+++A LGY AFA+DM GAGRALWD AE+ TAR P+ EDR LL++R AA+ + LG +D DR+AAVGYCFGG+ VLDLAR PGLR V S HGIL G P E + PR+LV + DPFV P++ + E RR A L V + G ARH FTRPEK D AAG YD ADA SW + L + L
Sbjct: 1 EALASLGYVAFAVDMLGAGRALWDGAEAKTARAPLYEDRRLLRSRMQAALTAASADSFAQALGPNVALDLDRVAAVGYCFGGLCVLDLAR--GNAPGLRGVVSFHGIL-----DGGGLPDPETDALRPRILVHNGDADPFVPPDKREQFLAEMGRRHAPLEFVSHPG-ARHGFTRPEKVQPADFAAGFGYDPQADAASWGSMKAFLADVL 202
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A5Q0BHN0_9GAMM (Dienelactone hydrolase family protein n=1 Tax=Candidatus Methylospira mobilis TaxID=1808979 RepID=A0A5Q0BHN0_9GAMM) HSP 1 Score: 157 bits (398), Expect = 1.870e-43 Identity = 102/257 (39.69%), Postives = 144/257 (56.03%), Query Frame = 1
Query: 67 TIRRQVVEYHDGGVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGP---RVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERL 828
TIR ++VEYH VTLQG A + P+ PGV+++H+ VG +++F+ K ++A G+AAFALDM+GAG+ + E+ +P +DR+LLQ R L+A+ L LE VD++++AA+G+CFGG+ VLDLAR + G VAS HG+L A E+ P P R+L LH +DP PE V A+++E AD Y HAFT P D G Y+ AD SW ++ L E L
Sbjct: 2 TIRTRLVEYHHDNVTLQGFFAWDDSKATPQ--PGVLISHSWVG-RDEFVCRKAIALAEAGHAAFALDMYGAGKTGSNPQENELLMKPFMQDRTLLQGRILSALHALRSLEEVDANKIAAIGFCFGGLCVLDLARTGIDIQG---VASFHGLLT----------APENIPPHPISARILALHGHNDPLAPPEHVTALQKELTAAGADWQTHVYSNTV-HAFTNPLAN---DPGFGTVYNPAADRRSWTSLLNFLHEVL 238
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A7S3E3V3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E3V3_9CHLO) HSP 1 Score: 157 bits (397), Expect = 3.000e-42 Identity = 106/252 (42.06%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 88 EYHDGGVTLQGLHAMPEGDGIPERI-PGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGIL-APMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERR---QADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERL 828
EY G V L G A EG R P V++ HTA+G E+FI+ KL +A LGY AF +DMFGA + E + + +DR LLQ+R LAA L D+ R+AA+GYCFGG VLDLAR V GLRA S HGIL AP+ E P+ RV+ H + DPF+ E + E E R +V +GG HAFTRP+KT E D GL YD +A SW +V L E +
Sbjct: 95 EYGHGDVKLFGYVA--EGAATASRPRPAVLVVHTAIGPHEEFIMDKLRRLAELGYVAFGVDMFGAEAVVLGE-EKVRYNKQFKDDRKLLQSRILAAFHEAASLPFTDASRVAAIGYCFGGKAVLDLARS--GVEGLRASISFHGILDAPV--------ELEGTPITARVVAFHGSRDPFIALEDKLSFHSEMESRCRGSKKWQMVEFGG-CYHAFTRPDKTQESDRTQGLFYDEYAAEKSWAMMVDVLAEEM 332
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A6L8HPZ1_9BACT (Dienelactone hydrolase family protein n=3 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A6L8HPZ1_9BACT) HSP 1 Score: 154 bits (390), Expect = 3.080e-42 Identity = 104/245 (42.45%), Postives = 129/245 (52.65%), Query Frame = 1
Query: 70 IRRQVVEYHDGGVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRV 804
I + EY DG L+G A D + PGV++AHT G F K IA LGY A A+DM+G G E+ + EDRSLLQ R AA+ L GVDS+R AA+GYCFGG+ VLDLAR + +A S HG+L P PG E A V PRVLVLH DDP +P+ V+A+ EEF R AD + YG + HAFT PE + G Y+ AD SW +
Sbjct: 3 ITTEAFEYSDGSTLLRGQLACD--DTWTDPRPGVLIAHTWAGCGP-FEQGKAADIAELGYVALAVDMYGGGIVGHSTEENAKLMSVVLEDRSLLQRRMTAALDALKAFPGVDSERTAAIGYCFGGLCVLDLARTGAS---FQAAVSFHGLLNP--PG-----NIEVADVSPRVLVLHGWDDPMAKPDSVEALAEEFTRAGADWQVHAYG-RTMHAFTNPEAN---NLDMGTVYNAQADRRSWNSM 230
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Match: A0A4V1Z9F2_9GAMM (Dienelactone hydrolase family protein n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A4V1Z9F2_9GAMM) HSP 1 Score: 153 bits (387), Expect = 8.140e-42 Identity = 101/251 (40.24%), Postives = 135/251 (53.78%), Query Frame = 1
Query: 79 QVVEYHDGGVTLQGLHAMPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAGRALWDRAESLTARRPITEDRSLLQTRALAAVRTLGRLEGVDSDRLAAVGYCFGGMVVLDLARMFPAVPGLRAVASLHGILAPMLPGAGKNPAAEDAPVGPRVLVLHATDDPFVRPEQVQAIKEEFERRQADLSIVRYGGKARHAFTRPEKTGEGDAAAGLSYDHHADADSWQRVVGPLKERLV 831
+ ++Y G L+G A E +P +P V++AH A G ++DF+ K +A LGYAAFALDM+G G ++ +P DR+LLQ R A+ + L VD DR+AA+G+CFGG+ VLDLAR + LR V S HG+ +P AG + P+ +VL LH DDP V PEQV A+ +E AD I YG + HAFT P D G YD ADA SW + L+E L
Sbjct: 6 RTIDYRHGPQPLEGFLAYDES--LPGPLPAVLIAH-AWGGRDDFVCGKARRLAELGYAAFALDMYGKGVLGTGPEQNAQLMQPFMADRALLQGRMQQALEVVKALPQVDPDRVAAMGFCFGGLCVLDLAR---SGAELRGVISFHGLF---VPPAG----VPNQPIRAKVLALHGYDDPMVPPEQVTALAQELTAAGADWQIHMYG-RTTHAFTNPAAN---DPGFGTVYDATADARSWLSLQSFLREVLT 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12460.1851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12460.1851.1 >prot_H-elongata_contig12460.1851.1 ID=prot_H-elongata_contig12460.1851.1|Name=mRNA_H-elongata_contig12460.1851.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp MPEGDGIPERIPGVILAHTAVGSQEDFILWKLDSIARLGYAAFALDMFGAback to top mRNA from alignment at H-elongata_contig12460:3617..5635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12460.1851.1 ID=mRNA_H-elongata_contig12460.1851.1|Name=mRNA_H-elongata_contig12460.1851.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2019bp|location=Sequence derived from alignment at H-elongata_contig12460:3617..5635+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12460:3617..5635+ >mRNA_H-elongata_contig12460.1851.1 ID=mRNA_H-elongata_contig12460.1851.1|Name=mRNA_H-elongata_contig12460.1851.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at H-elongata_contig12460:3617..5635+ (Himanthalia elongata Himel1 dioecious)back to top |