mRNA_H-elongata_contig124405.1829.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: D7G8Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z1_ECTSI) HSP 1 Score: 300 bits (769), Expect = 6.400e-101 Identity = 149/195 (76.41%), Postives = 163/195 (83.59%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNAVGVPAAHPHAFSSGFGPVMGARKGTGIHSAAPRCGAGRCGLERPLVTLKYRGLVDAVR 585
Q+RLGVNQPGH P GAA+AGA ATVFHDA+MTP+DVVKQRLQLGYHKG+LDC+LTI+RTEG QAFYRSFPTTLFMNIPYGCVMVA NESLK MRPAGDYDT+TFLLAGSGAGAVAAV TNPLDVVKTRLQTQA P A A S GF GTG+HSAA RC GRCG ++P+VTL+Y+GLVDAVR
Sbjct: 13 QDRLGVNQPGHQPTGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKHVMRPAGDYDTKTFLLAGSGAGAVAAVATNPLDVVKTRLQTQAFRGAAAPLA---ARSEGFAAPKEGATGTGLHSAAARCATGRCGADKPVVTLQYQGLVDAVR 204
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE) HSP 1 Score: 251 bits (642), Expect = 3.970e-81 Identity = 128/166 (77.11%), Postives = 139/166 (83.73%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNAVGVPAAHPHAFSSGF-----GPVMGARKG 483
++RLGVNQPGH PAGAA+AGA ATVFHDA+MTP+DVVKQRLQLGYHKG+LDC+LTI+RTEG QAFYRSFPTTLFMNIPYGCVMVA NESLKR MRPAGDYD +TFLLAGSGAGA+AAV TNPLDVVKTRLQTQA V P A A S GF G +G R G
Sbjct: 109 KDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQAFRGVAAPQA---ARSEGFAAPKEGAAVGGRGG 271
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.610e-68 Identity = 134/217 (61.75%), Postives = 149/217 (68.66%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQAL-NAVGVPAAHPHAFS-SGFG--PVM--------GARKGTG---------IHS-AAPRCGAGRCGLERPLVTLKYRGLVDAVR 585
+ R G N GH P AA AG ATVFHDA MTP+DV+KQRLQLGY++G+ DC+ TI RTEGA+A YRSFPTTLFMNIPYG VMVAANESLK A+RP GD+ T TF+ AG GAGAVAA T PLDVVKTRLQTQAL A G A P A S +G G PV+ GA G G HS AA RC G CG E+P V L+YRGLVDAVR
Sbjct: 104 KSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLGRGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKG-CG-EKPEVPLQYRGLVDAVR 318
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.400e-62 Identity = 121/224 (54.02%), Postives = 140/224 (62.50%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNA----VGVPAAHPHAF----------------SSGF---------GPVMGARKGTGIHSAAPRCGAGRCGLERPLVTLKYRGLVDAVR 585
+ER G N GH P AA AG ATVFHDA+MTP+DV+KQRLQLGY++G+ DC+ TI R EG A YRSFPTTLFMNIPYG +MVAANESLK A+RP GD+ T T++LAG GAGAVAA T PLDVVKT LQTQA++A AA PH SSG G + +AA RC G CG E+P V L+YRG VDA R
Sbjct: 104 KERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHAHATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQG-CG-EKPEVKLQYRGFVDAAR 325
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK) HSP 1 Score: 204 bits (519), Expect = 7.340e-62 Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNAVGVPAAHPHAFSSGFGPVMGARKGTGIHSAAPRCGAGRCGLERPLVTLKYRGLVDAVR 585
+E GVN+PGHHP AA GA A+VFHD IMTP+DVVKQRLQLGY++G+ DC T+ RTEGAQAF+ S P TL MNIPYGC+MVA NESLKR +RP GDYD T + AG+GAGA A+++T PLDVVKTRLQ Q A A H +G G +G + T +AA + GA R + LKY G+ A R
Sbjct: 108 KESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATAGAAAADFGHGRPAGRG--VGQTRPTATVTAA-QLGAARLEPRPRALGLKYSGVAAAAR 299
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK) HSP 1 Score: 193 bits (490), Expect = 8.240e-58 Identity = 91/133 (68.42%), Postives = 107/133 (80.45%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQ 399
+E GVN+PGHHP AA GA A+VFHD IMTP+DVVKQRLQLGY++G+ DC T+ RTEGAQAF+ S P TL MNIPYGC+MVA NESLKR +RP GDYD T + AG+GAGA A+++T PLDVVKTRLQ Q
Sbjct: 108 KESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQ 240
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA) HSP 1 Score: 189 bits (481), Expect = 6.930e-55 Identity = 99/170 (58.24%), Postives = 121/170 (71.18%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNAVGVPAAH-PHAFSSGFGPVMGARKGTGIHSAAP 507
+ER GVN H+ GAA AGA AT+FHD+IMTP+DV+KQRLQLGY+KG+ C ++I R EG +AFY S P TLFMN+PYG VMVAANES+KR ++PAGDY T T+LLAGSGAGA+AA T PLD++KTRLQTQ H PH G G V R +H+ +P
Sbjct: 161 KERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQVTIQTTRSTGHAPHGRPPGAGEV--GRGNGALHTVSP 328
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A7S2RU47_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RU47_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.170e-51 Identity = 82/130 (63.08%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 10 LGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQ 399
G N+ GHHP AA +GA AT+ HD+IMTP+DVVKQRLQLG++ G+ DC +I RTEGA AF+ SFPTTLFMNIPY +MVA+NES K+ + P +Y+ F ++G AGAVAA TNPLDVVKTRLQTQ
Sbjct: 101 FGANEEGHHPVAAAASGAIATIAHDSIMTPMDVVKQRLQLGFYNGMSDCFWSIVRTEGAGAFFLSFPTTLFMNIPYAGIMVASNESFKKVLNPTNEYNLPVFFISGGMAGAVAAAFTNPLDVVKTRLQTQ 230
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: A0A7S2G6M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6M2_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.890e-49 Identity = 85/157 (54.14%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 7 RLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMR-PAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNA-VGVPAAHPHAFSSGFGPVMG 471
+LG NQPGHHP AA +G +T+ HD+IMTP+D VKQRLQLGY++G+ C++ + R EG AFY + PTTL MN+P+G +MV +NESLK + P+G+ D T+L AGSGAGA+AA T PLD++KTRLQTQ ++A VG SSG G G
Sbjct: 58 KLGANQPGHHPLAAATSGVVSTLAHDSIMTPMDTVKQRLQLGYYRGIRHCVMHMARHEGFSAFYVALPTTLLMNLPFGAIMVTSNESLKTLLTGPSGERDIFTYLAAGSGAGAIAAAATTPLDMIKTRLQTQHMSAQVGSSMGSVAVMSSGAGGGSG 214
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Match: K3X9N6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N6_GLOUD) HSP 1 Score: 157 bits (397), Expect = 2.190e-43 Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 1 QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLDCMLTIRRTEGAQAFYRSFPTTLFMNIPYGCVMVAANESLKRAMRPAGDYDTQTFLLAGSGAGAVAAVITNPLDVVKTRLQTQALNAVGVPAAHPHAFSSGFGPVMGARKGTGIHSAAPRCGAGRCGLERPLVT-----------LKYRGLVDAV 582
++ LG + H P + AG ATV HD IMTP+DV+KQRLQLGY+ GV DC TI R EG +A Y SFPTT FMN+PY +MV+ANE+ K+ + P+G+ + + +G+ AGA+A V+TNPLDV KTRLQTQ L P+ A S + G+ P C ++ P+ L+YRGL DA+
Sbjct: 120 KKTLGADSAEHTPIASGAAGVVATVCHDMIMTPMDVIKQRLQLGYYSGVTDCFKTIVRQEGLRALYISFPTTFFMNLPYSMIMVSANETFKKILNPSGEMNISAYFASGAMAGALAGVLTNPLDVAKTRLQTQMLLVQEDPSCPSRARCSQL-------QTRGVALTVPTS----CTIKHPVAATKTIGGEPKMRLQYRGLFDAL 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124405.1829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig124405.1829.1 >prot_H-elongata_contig124405.1829.1 ID=prot_H-elongata_contig124405.1829.1|Name=mRNA_H-elongata_contig124405.1829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp QERLGVNQPGHHPAGAAIAGATATVFHDAIMTPVDVVKQRLQLGYHKGVLback to top mRNA from alignment at H-elongata_contig124405:66..1294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig124405.1829.1 ID=mRNA_H-elongata_contig124405.1829.1|Name=mRNA_H-elongata_contig124405.1829.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1229bp|location=Sequence derived from alignment at H-elongata_contig124405:66..1294- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig124405:66..1294- >mRNA_H-elongata_contig124405.1829.1 ID=mRNA_H-elongata_contig124405.1829.1|Name=mRNA_H-elongata_contig124405.1829.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig124405:66..1294- (Himanthalia elongata Himel1 dioecious)back to top |