mRNA_H-elongata_contig124319.1823.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig124319.1823.1
Unique NamemRNA_H-elongata_contig124319.1823.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: D7FJJ6_ECTSI (Solute carrier family 35 member 3A, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ6_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 5.190e-89
Identity = 139/235 (59.15%), Postives = 175/235 (74.47%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSR 705
            E+AKL +P +LY L+NN+LY AL++LD ATY+VCYQTKI+TTALFS +LL ++ S  KW +LVLL VGVALA+L  ++T            Q P++GFLCVM A C+SGFAGVYFEMLLKGS+TSLWI+NIQMG+PS+ LA   V V DW   TS GFF GY  V+  ++VLQA GGLVVA VVK+ DNIRKSFA A+SI+ISC +S   F F+PT  F +G++ V  SV LY++
Sbjct:   83 EMAKLMIPAMLYTLQNNMLYMALENLDAATYSVCYQTKILTTALFSVILLRRKLSATKWGALVLLAVGVALAQLSSQSTNSPKADESSR-GQSPVVGFLCVMGAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLAFGSVIVKDWRAVTSNGFFFGYGWVVAAVIVLQAVGGLVVAVVVKYADNIRKSFATAISIIISCALSTLFFAFKPTFLFFIGSAMVVGSVFLYTK 316          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A836C750_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C750_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.830e-79
Identity = 136/278 (48.92%), Postives = 180/278 (64.75%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAEL-----PKETTKQESVHP----------------------------------GGVVK---QLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            E+ KL +P+ LY+++NNLLY AL +LDPATY+VCYQ KI+TTALFS +LL KR S +KW +LVLL +GVALAEL     PK         P                                  GG  +   Q  +LGFLCV+AA C+SGFAGV+FEM+LKG++TSLWI+N+QMGLPS+  A+   +  D      +GFF+GY+ ++WG++VLQA GGL+VA VVK+ DNI K+FA+AVSI+ SC++S  LF F+P+  F+VG   V  SV LYS+P
Sbjct:   81 ELGKLALPSFLYMVQNNLLYEALSNLDPATYSVCYQLKIMTTALFSVILLKKRLSPLKWMALVLLTLGVALAELATHAAPKAADADAPPEPMLPLPTAAPDLDSGSAIGNPLQRRLQEDGEAAALGGFEELKMQRQLLGFLCVLAATCTSGFAGVWFEMILKGAKTSLWIRNVQMGLPSILFALASCYTKDLALLRDRGFFYGYTGIVWGVIVLQAVGGLMVAVVVKYADNILKAFASAVSIVTSCLLSALLFGFRPSPVFMVGTLLVSVSVFLYSKP 358          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A7S2U9J9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9J9_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.160e-78
Identity = 127/236 (53.81%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            EV KL VP+LLY ++NNLLY AL +LD ATY VCYQ KI+TTALFS  LL + FS +KW SLV+L +GVA+ +L     K   V       +  M+G + V+ A C+SGFAGVYFE +LKGS T+LW++NIQMGLPSV +A  GV++ D      KGFF GY+ ++W +V +QA GGL+VA VVK+ DN+ K FA + SI+ISCI+S  +FDF+P   F+ GAS V  S ++YSRP
Sbjct:  122 EVLKLCVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSATLLQRSFSRLKWMSLVILTIGVAIVQLSGSGDKHHHVASEDEASRNRMVGLVAVLCAACTSGFAGVYFERILKGSSTTLWLRNIQMGLPSVIIAYIGVYMKDSMIIAEKGFFVGYTPLVWTVVTVQAVGGLIVAVVVKYADNVLKVFATSFSIIISCIISAVVFDFRPNFLFVCGASLVMASTVMYSRP 357          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: B7FYG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG7_PHATC)

HSP 1 Score: 245 bits (625), Expect = 3.540e-77
Identity = 125/247 (50.61%), Postives = 172/247 (69.64%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELP-----------KETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            E+ KLTVP+LLY ++NNLLY AL +LD ATY VCYQ KI+TTALFS LLL ++FS +KW SLV+L +GVA+ +L            K  T       G        +G + V+ A C+SGF+GVYFE +LKGS TSLWI+N+QMGL S+ +A   V+V D +   ++GF+ GY+ ++W +V +QA GGL+VA VVK+ DN+ K FA + SI++SCI+S FLFDF P+++F+VGAS V T+ ++YS P
Sbjct:   65 ELLKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSTMKWLSLVVLTIGVAIVQLSGSGDQHSEQDSKAATDAVDDTNGTAAAHTRWVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNVQMGLSSIVIAYLTVYVKDAEAIRTQGFWGGYNTLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIVSAFLFDFHPSVSFLVGASLVVTATVMYSSP 311          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A7S4SDY4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDY4_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.570e-76
Identity = 123/236 (52.12%), Postives = 167/236 (70.76%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            EV KL VP+LLY ++NNLLY AL +LD ATY VCYQ KI+TTA+FS +LL + FS  KW SL++L  GVA+ +    + K  S      + Q   +G + V+ A C+SGF+GVYFE +LKGS+TSLWI+NIQMG  S+ +++  VF+ D    ++KGFF GYS ++W +V +QA GGL+VA VVK+ DN+ K+FAA+ SI+ SCI+S  LFDFQP   F+ GA+ V +S +LYS P
Sbjct:  145 EVLKLCVPSLLYAVQNNLLYIALTNLDAATYQVCYQLKILTTAIFSAILLKRTFSCTKWFSLIILTAGVAIVQTSGSSDKSSSSDANVSINQNRFVGTVAVLCAACTSGFSGVYFEKILKGSKTSLWIRNIQMGFSSIFISLIMVFLQDLAAVSTKGFFVGYSPLVWLVVTIQAAGGLIVAVVVKYADNVLKTFAASFSIIASCIVSSVLFDFQPNKMFLAGAALVVSSTVLYSWP 380          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A7S2VC43_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VC43_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.480e-75
Identity = 126/254 (49.61%), Postives = 170/254 (66.93%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELP----KETTKQESVHPGGVVKQLP--------------MLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            E+AKLT+P+LLY ++NNLLY AL +LD ATY VCYQ KI+TTALFS LLL ++FS  KW SL++L VGVA+ ++     + TT                             ++G + V+ A C+SGF+GVYFE +LKGS TSLWI+NIQMGLPS+ +A   V+V D     ++GF  GYS+++W +V +QA GGL+VA VVK+ DN+ K FA + SI++SCI+S FLFDF PT  F+ GAS V T+ ++YS P
Sbjct:   49 EIAKLTIPSLLYTIQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSGQKWMSLIVLTVGVAIVQISGSGDQHTTNAHXXXXXXXXXXXXXXXXXXXXXXXXNRVIGLIAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSILIAYITVYVKDAPAVQTQGFLGGYSSLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIISAFLFDFHPTWMFLCGASLVVTATVMYSSP 302          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A7S3L616_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L616_9STRA)

HSP 1 Score: 237 bits (604), Expect = 4.860e-73
Identity = 123/242 (50.83%), Postives = 166/242 (68.60%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGV------VKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            E+ KLTVP+LLY ++NNLLY AL +LD ATY VCYQ KI+TTALFS ++L ++FS  KW +LV+L VGVA+ ++     +                 Q  ++G + V+ A C+SGF+GVYFE +LKGS TSLWI+NIQMGLPSV +A   V V D      +GFF GY+ ++W +V +QA GGL+VA VVK+ DN+ K FA + SI++SCI+S FLFDF P+  F+ GAS V T+ ++YS P
Sbjct:  154 EILKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSAVMLQRKFSGQKWFALVVLTVGVAVVQVSGSGDQHSDXXXXXXXPSNQEAPQNRVVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSVVIAYIAVCVKDAAAVRQQGFFGGYNNIVWTVVAVQAIGGLIVATVVKYADNVLKVFATSFSIVLSCIISAFLFDFHPSWMFLCGASLVVTATVMYSSP 395          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A7S3PWM7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWM7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 5.800e-73
Identity = 122/236 (51.69%), Postives = 162/236 (68.64%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP 708
            EV K++VP+ LY+++NNLLY AL +LD ATY VCYQ KI+TTALFS  +L + FS  KW +LV+L +GVA+ +     T   S        Q   LG   ++ A C+SGF+GVYFE +LKGS TSLW++NIQMGLPS+ LA+  VF+ D      KGFF GYS  +W +VV+QA GGL+VA VVK+ DN+ K+FA++  I+ISC+MS  LF  +    F+VGAS V  S +LYS+P
Sbjct:  141 EVIKISVPSFLYVIQNNLLYLALTNLDAATYQVCYQLKILTTALFSATMLNRTFSKTKWLALVILTIGVAVVQ-----TSGNSASHSENSDQNRSLGLFAILCAACTSGFSGVYFEKMLKGSSTSLWMRNIQMGLPSMLLALMTVFIQDGRIIREKGFFVGYSTTVWTVVVVQAVGGLIVAVVVKYADNVLKTFASSFGIVISCLMSAILFGQKYNAAFLVGASLVVLSTVLYSKP 371          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: A0A6J8AU58_MYTCO (SLC35A1_2_3 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AU58_MYTCO)

HSP 1 Score: 235 bits (599), Expect = 8.240e-73
Identity = 113/235 (48.09%), Postives = 172/235 (73.19%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSR 705
            +  K+++P+++Y+L+NNLLY A+ +LD ATY V YQ KI+TTA+FS  +L K+ S ++W+SLV+L +GV++ +L    +KQ++      V+Q PMLGF+CV+ + C SGFAGVYFE +LKG++ S+W++N+Q+G   V + +  + ++D  + T KGFFHGY +++W ++ LQ+ GGL VA VVK+ DNI K FA + +I++SCI S++ FDFQ TL F +GAS V  SV +YSR
Sbjct:  127 DCVKVSIPSIIYVLQNNLLYVAVSNLDAATYQVSYQLKILTTAVFSVFMLKKQISKLQWTSLVILFIGVSVVQLQPTESKQKAPP---AVEQNPMLGFICVVISCCMSGFAGVYFEKILKGTKGSVWLRNVQLGGLGVVIGLITMEINDGTKVTEKGFFHGYHSIVWFVIFLQSFGGLCVAVVVKYADNILKGFATSAAIILSCIASIYFFDFQLTLQFSLGASLVMYSVYMYSR 358          
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Match: B8CBK0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBK0_THAPS)

HSP 1 Score: 231 bits (588), Expect = 3.600e-72
Identity = 117/234 (50.00%), Postives = 165/234 (70.51%), Query Frame = 1
Query:    1 EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLLGKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLCVMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDWDRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSIMISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYS 702
            E+ KL VP+LLY ++NNLLY AL +LD ATY + YQ KI+TTALFS  +LG++FS  KW SLV+L  GVA+ ++    +     H  G   +   +G + V+ A C+SGF+GVYFE +LKGSET+LW++NIQMG+PS+ +A+  VF+ D +  + KGFF GYS ++  ++ +QA GGL+VA VVK+ DN+ K FA++ SI+ SCI+S F FDF+P + F+VGA  V  S  +YS
Sbjct:   66 EMLKLCVPSLLYTVQNNLLYLALTNLDAATYQILYQLKILTTALFSATMLGRQFSATKWCSLVVLTAGVAVVQV----SGSGDSHANGNEDRNRFVGLVAVLCASCTSGFSGVYFEKILKGSETTLWVRNIQMGIPSMIIALVTVFLGDSEEVSRKGFFVGYSPLVITVITVQAVGGLIVAVVVKYADNVLKVFASSFSILFSCIISAFAFDFRPNVLFLVGAFLVILSTAMYS 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124319.1823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ6_ECTSI5.190e-8959.15Solute carrier family 35 member 3A, partial n=1 Ta... [more]
A0A836C750_9STRA2.830e-7948.92Nucleotide-sugar transporter-domain-containing pro... [more]
A0A7S2U9J9_9STRA4.160e-7853.81Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FYG7_PHATC3.540e-7750.61Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4SDY4_9STRA2.570e-7652.12Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2VC43_9STRA1.480e-7549.61Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3L616_9STRA4.860e-7350.83Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3PWM7_9STRA5.800e-7351.69Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6J8AU58_MYTCO8.240e-7348.09SLC35A1_2_3 n=1 Tax=Mytilus coruscus TaxID=42192 R... [more]
B8CBK0_THAPS3.600e-7250.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124319contigH-elongata_contig124319:189..899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.2
Seed ortholog evalue1.5e-71
Seed eggNOG ortholog2880.D7FJJ6
KEGG koko:K15272
KEGG TC2.A.7.12
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size711
Cds size711
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929732.1684835-CDS-H-elongata_contig124319:188..8991622929732.1684835-CDS-H-elongata_contig124319:188..899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig124319 189..899 +
1691679136.6062374-CDS-H-elongata_contig124319:188..8991691679136.6062374-CDS-H-elongata_contig124319:188..899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig124319 189..899 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124319.1823.1prot_H-elongata_contig124319.1823.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig124319 189..899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig124319.1823.1

>prot_H-elongata_contig124319.1823.1 ID=prot_H-elongata_contig124319.1823.1|Name=mRNA_H-elongata_contig124319.1823.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
EVAKLTVPTLLYILRNNLLYSALQHLDPATYTVCYQTKIITTALFSELLL
GKRFSVVKWSSLVLLMVGVALAELPKETTKQESVHPGGVVKQLPMLGFLC
VMAAVCSSGFAGVYFEMLLKGSETSLWIKNIQMGLPSVALAITGVFVDDW
DRATSKGFFHGYSAVIWGIVVLQAGGGLVVAFVVKHTDNIRKSFAAAVSI
MISCIMSMFLFDFQPTLTFIVGASFVCTSVLLYSRP*
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mRNA from alignment at H-elongata_contig124319:189..899+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig124319.1823.1 ID=mRNA_H-elongata_contig124319.1823.1|Name=mRNA_H-elongata_contig124319.1823.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=711bp|location=Sequence derived from alignment at H-elongata_contig124319:189..899+ (Himanthalia elongata Himel1 dioecious)
GAGGTAGCAAAGCTGACGGTGCCAACGCTGCTCTACATCCTCCGAAACAA TCTCCTGTACTCCGCGCTGCAGCATCTCGACCCCGCCACCTACACGGTAT GCTACCAAACAAAAATTATCACCACCGCTCTTTTTTCTGAGCTTCTCCTG GGCAAACGGTTTAGCGTAGTCAAGTGGTCGTCACTGGTTTTGCTTATGGT AGGCGTTGCCCTTGCGGAGTTGCCCAAAGAGACAACGAAGCAAGAGAGCG TCCACCCGGGGGGGGTTGTTAAGCAGCTTCCGATGCTCGGGTTTTTGTGT GTTATGGCGGCTGTATGCTCCTCTGGATTCGCCGGAGTGTACTTCGAGAT GTTGTTGAAGGGCAGTGAGACTTCCCTCTGGATCAAAAACATCCAGATGG GTCTTCCCAGCGTCGCCCTGGCTATCACGGGTGTCTTCGTTGACGATTGG GATCGCGCGACTTCGAAGGGATTCTTCCACGGTTACAGCGCAGTGATTTG GGGAATCGTGGTTCTCCAGGCGGGAGGAGGCCTTGTGGTCGCTTTCGTTG TCAAACACACGGACAATATCCGGAAATCGTTCGCGGCAGCAGTGTCCATA ATGATTTCGTGCATCATGTCGATGTTCTTGTTCGACTTCCAACCGACTCT GACGTTCATCGTCGGTGCCAGCTTCGTTTGCACGTCCGTATTATTGTACA GCAGGCCTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig124319:189..899+

>mRNA_H-elongata_contig124319.1823.1 ID=mRNA_H-elongata_contig124319.1823.1|Name=mRNA_H-elongata_contig124319.1823.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig124319:189..899+ (Himanthalia elongata Himel1 dioecious)
GAGGTAGCAAAGCTGACGGTGCCAACGCTGCTCTACATCCTCCGAAACAA
TCTCCTGTACTCCGCGCTGCAGCATCTCGACCCCGCCACCTACACGGTAT
GCTACCAAACAAAAATTATCACCACCGCTCTTTTTTCTGAGCTTCTCCTG
GGCAAACGGTTTAGCGTAGTCAAGTGGTCGTCACTGGTTTTGCTTATGGT
AGGCGTTGCCCTTGCGGAGTTGCCCAAAGAGACAACGAAGCAAGAGAGCG
TCCACCCGGGGGGGGTTGTTAAGCAGCTTCCGATGCTCGGGTTTTTGTGT
GTTATGGCGGCTGTATGCTCCTCTGGATTCGCCGGAGTGTACTTCGAGAT
GTTGTTGAAGGGCAGTGAGACTTCCCTCTGGATCAAAAACATCCAGATGG
GTCTTCCCAGCGTCGCCCTGGCTATCACGGGTGTCTTCGTTGACGATTGG
GATCGCGCGACTTCGAAGGGATTCTTCCACGGTTACAGCGCAGTGATTTG
GGGAATCGTGGTTCTCCAGGCGGGAGGAGGCCTTGTGGTCGCTTTCGTTG
TCAAACACACGGACAATATCCGGAAATCGTTCGCGGCAGCAGTGTCCATA
ATGATTTCGTGCATCATGTCGATGTTCTTGTTCGACTTCCAACCGACTCT
GACGTTCATCGTCGGTGCCAGCTTCGTTTGCACGTCCGTATTATTGTACA
GCAGGCCTTAGGAGGTAGCAAAGCTGACGGTGCCAACGCTGCTCTACATC
CTCCGAAACAATCTCCTGTACTCCGCGCTGCAGCATCTCGACCCCGCCAC
CTACACGGTATGCTACCAAACAAAAATTATCACCACCGCTCTTTTTTCTG
AGCTTCTCCTGGGCAAACGGTTTAGCGTAGTCAAGTGGTCGTCACTGGTT
TTGCTTATGGTAGGCGTTGCCCTTGCGGAGTTGCCCAAAGAGACAACGAA
GCAAGAGAGCGTCCACCCGGGGGGGGTTGTTAAGCAGCTTCCGATGCTCG
GGTTTTTGTGTGTTATGGCGGCTGTATGCTCCTCTGGATTCGCCGGAGTG
TACTTCGAGATGTTGTTGAAGGGCAGTGAGACTTCCCTCTGGATCAAAAA
CATCCAGATGGGTCTTCCCAGCGTCGCCCTGGCTATCACGGGTGTCTTCG
TTGACGATTGGGATCGCGCGACTTCGAAGGGATTCTTCCACGGTTACAGC
GCAGTGATTTGGGGAATCGTGGTTCTCCAGGCGGGAGGAGGCCTTGTGGT
CGCTTTCGTTGTCAAACACACGGACAATATCCGGAAATCGTTCGCGGCAG
CAGTGTCCATAATGATTTCGTGCATCATGTCGATGTTCTTGTTCGACTTC
CAACCGACTCTGACGTTCATCGTCGGTGCCAGCTTCGTTTGCACGTCCGT
ATTATTGTACAGCAGGCCTTAG
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