mRNA_H-elongata_contig123966.1802.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: D7FPY9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI) HSP 1 Score: 193 bits (491), Expect = 1.690e-56 Identity = 98/144 (68.06%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 1 QPLVDLIDPQCVIGKRFYRDSCVRRDGSFVTDTGSILASTVRDAAGLQPRRGMRNAGADLSPDSLKDLRVVGSEHFPLRTVLVDNQPKTVIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHGAGISTAG 432
+PL+DLID +CVIGKRFYRDSCVRRDG+ DTG T R A G+ P S +S+KDL+VVGSEHFPLRTVLVDNQP+TV+QQANVLPV+SWFP DTEDRQLLDLLPVLLALTSC DVRS+L LR G G+ G
Sbjct: 382 EPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGR----TARGATGV-PTATAEAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGVGGGG 520
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A6H5JWM9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.650e-54 Identity = 98/144 (68.06%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 1 QPLVDLIDPQCVIGKRFYRDSCVRRDGSFVTDTGSILASTVRDAAGLQPRRGMRNAGADLSPDSLKDLRVVGSEHFPLRTVLVDNQPKTVIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHGAGISTAG 432
+PL+DLID +CVIGKRFYRDSCVRRDG+ DTG T R A G+ P S +S+KDL+VVGSEHFPLRTVLVDNQP+TV+QQANVLPV+SWFP DTEDRQLLDLLPVLLALTSC DVRS+L LR G G+ G
Sbjct: 678 EPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGR----TARGATGV-PVATAEAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVGVGGGG 816
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: M2VTB3_GALSU (CTD small phosphatase like isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTB3_GALSU) HSP 1 Score: 61.2 bits (147), Expect = 4.270e-8 Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 151 RGMRNAGADLSPDSLKDLRVVGSEHFPLRTVLVDNQPKTV-IQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLR 405
R R++ + + LKDLRV+G + + V++DN P+ +Q N +P+ +W D+EDR+LLDLLP L L++C DVR L R
Sbjct: 373 RAFRDSCVFIEGNFLKDLRVLGRDLS--KCVILDNSPQAFGLQVENGIPITTWVD-DSEDRELLDLLPFLKQLSNCEDVRPFLSKR 455
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A1L0BKV1_9ASCO (CIC11C00000003019 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0BKV1_9ASCO) HSP 1 Score: 55.1 bits (131), Expect = 5.370e-6 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 193 LKDL-RVVGSEHFPLRTVLVDNQPKT-VIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHG 411
+KDL + V E V++DN P + +Q+ N + + W +D DR LL+LLP+L +L+ C DVR I+GLR+G
Sbjct: 281 IKDLSQFVAKEEDLKNVVILDNSPVSYALQEHNGVMIEGWI-NDQNDRDLLNLLPMLYSLSLCIDVRFIIGLRNG 354
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A2A9M4H7_9APIC (Dullard family phosphatase domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M4H7_9APIC) HSP 1 Score: 55.1 bits (131), Expect = 5.930e-6 Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 112 ASTVRDAAGLQP-------RRGMRNAGADLSPDSLKDLRVVGSEHFPLRTVLVDNQPKTVIQ-QANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRH 408
A+ + D LQP R R G +L KDL+ V S+ RTVL+D+ P + N +P+ W D LLDLLP+LLAL S DVR++L LRH
Sbjct: 204 ANAILDNLDLQPYVDRCYTREDCRLVGPNLYA---KDLQKVCSDLS--RTVLIDDSPVAALYFPDNYIPIEGWCG-SAADTALLDLLPLLLALRSVRDVRTVLQLRH 304
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: C4Y807_CLAL4 (FCP1 homology domain-containing protein n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y807_CLAL4) HSP 1 Score: 54.7 bits (130), Expect = 7.230e-6 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 193 LKDLRVVGSEHFPLRTVLV-DNQPKT-VIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHG 411
+KDL S+ L+ V++ DN P + + N + + W +D DR LL+LLP+L AL+ C DVR ILGLR G
Sbjct: 273 IKDLSKFFSKDDDLKNVIILDNSPVSYAFHENNAVMIEGWI-NDQSDRDLLNLLPMLTALSLCIDVRFILGLRSG 346
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A0G4FC44_VITBC (FCP1 homology domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FC44_VITBC) HSP 1 Score: 54.3 bits (129), Expect = 1.080e-5 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 193 LKDLRVVGSEHFPLRTVLVDNQPKTVIQ-QANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLR 405
+KDLR+V H R +LVD+ P + N LP++ W+ +DR LLDL+P+LLA+ DVR IL LR
Sbjct: 238 VKDLRIV--RHELSRVILVDDSPIAYSKFPENALPIQGWWGQ-RDDRALLDLIPLLLAVRKTKDVRHILSLR 306
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A7S3G6I3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G6I3_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 1.560e-5 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 160 RNAGADLSPDSLKDLRVVGSEHFPLR-TVLVDNQPKT-VIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILG 399
R A + +KDL +G PL+ T+++DN P + ++Q N +P+ SWF +DR+LLDL+PVL + + DV +LG
Sbjct: 191 REACVSVQGSLVKDLSRLGR---PLKDTIILDNSPLSYMLQPENAVPISSWFDQP-DDRELLDLIPVLTTMATVPDVTEVLG 268
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: A0A7S0RHZ6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RHZ6_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 4.980e-5 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 193 LKDLRVVGSEHFPLR-TVLVDNQPKTV-IQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHG 411
LKDL V+G + LR T++VDN P+ Q N +P+ SWF D+ED +LL+LLP L L + DVR + + G
Sbjct: 387 LKDLTVLGRD---LRHTIIVDNSPQAFGFQVDNGIPIESWFD-DSEDIELLELLPFLETLVNVDDVRPHIAQQFG 457
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Match: UPI001C806D8C (Nuclear envelope morphology protein 1 n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C806D8C) HSP 1 Score: 52.4 bits (124), Expect = 5.110e-5 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 193 LKDLRVVGSEHFPL-----RTVLVDNQPKT-VIQQANVLPVRSWFPHDTEDRQLLDLLPVLLALTSCHDVRSILGLRHG 411
+KDL S+ FP V++DN P + + + N + + W +D +DR LL+LLP+L +L+ C DVR ILGLR G
Sbjct: 445 IKDL----SKFFPKDDELKHVVILDNSPVSYALHEDNAVMIEGWI-NDQDDRDLLNLLPMLHSLSVCIDVRFILGLRSG 518 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123966.1802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig123966.1802.1 >prot_H-elongata_contig123966.1802.1 ID=prot_H-elongata_contig123966.1802.1|Name=mRNA_H-elongata_contig123966.1802.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp QPLVDLIDPQCVIGKRFYRDSCVRRDGSFVTDTGSILASTVRDAAGLQPRback to top mRNA from alignment at H-elongata_contig123966:226..678- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig123966.1802.1 ID=mRNA_H-elongata_contig123966.1802.1|Name=mRNA_H-elongata_contig123966.1802.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=453bp|location=Sequence derived from alignment at H-elongata_contig123966:226..678- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig123966:226..678- >mRNA_H-elongata_contig123966.1802.1 ID=mRNA_H-elongata_contig123966.1802.1|Name=mRNA_H-elongata_contig123966.1802.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at H-elongata_contig123966:226..678- (Himanthalia elongata Himel1 dioecious)back to top |