mRNA_H-elongata_contig12372.1790.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12372.1790.1
Unique NamemRNA_H-elongata_contig12372.1790.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12372.1790.1 vs. uniprot
Match: D8LC61_ECTSI (Putative copper transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC61_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 4.160e-56
Identity = 115/181 (63.54%), Postives = 138/181 (76.24%), Query Frame = 2 
Query: 2408 GVKANARSNLPRTDSPGFPSQSHTYISLSVKGMMCMENCGQMVQQALGEVSGVRSVTVHFPTRTASVQVKPGSNVAIADLTNALEVIGFESKCVATSTSEESTLEEAGVNAVWAIASALGLVDRGCAMAWGDACNCGDGCKCVNCSQHMKKVSHAVDLVLKAVDLSSTSNPTSPAQGSPAP 2950
            G KA  R+    T  P    Q+ ++ISLSV GMMCMENCGQ VQQAL +V GV SVT+HFPTRTAS++V   +NV + DLT+AL+ IGF S CVAT+T++E TLE+ GVNAVWAIA+ALGLVD GCAMAWG  C+CGD C+C+NC QHMKKVSHAVDLVL+A DLSS+  P  P +  P P
Sbjct:  656 GHKAPERTRACSTSPPA--EQTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDAKANVTLGDLTSALDAIGFGSSCVATTTTQEPTLEQDGVNAVWAIANALGLVDPGCAMAWGRPCSCGDDCRCINCPQHMKKVSHAVDLVLQAADLSSSKAP--PEEPKPKP 832
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BLAST of mRNA_H-elongata_contig12372.1790.1 vs. uniprot
Match: A0A6H5KKC5_9PHAE (HMA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKC5_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 7.890e-30
Identity = 74/120 (61.67%), Postives = 92/120 (76.67%), Query Frame = 2 
Query: 2408 GVKANARSNLPRTDSPGFPSQSHTYISLSVKGMMCMENCGQMVQQALGEVSGVRSVTVHFPTRTASVQVKPGSNVAIADLTNALEVIGFESKCVATSTSEESTLEEAGVNAVWAIASALG 2767
            G KA  R+    T  P    Q+ ++ISLSV GMMCMENCGQ VQQAL +V GV SVT+HFPTRTAS++V   +NV + DLT+AL+ IGF+S CVAT+T++E TLE+ GVNAVWAIA+ALG
Sbjct:  800 GDKAPERTRACSTSPPA--EQTSSFISLSVSGMMCMENCGQTVQQALKKVPGVLSVTIHFPTRTASIKVDTEANVTLGDLTSALDAIGFDSSCVATTTAQEPTLEQDGVNAVWAIANALG 917
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BLAST of mRNA_H-elongata_contig12372.1790.1 vs. uniprot
Match: A0A836CMV3_9STRA (HMA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMV3_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.320e-23
Identity = 75/196 (38.27%), Postives = 96/196 (48.98%), Query Frame = 2 
Query: 2408 GVKANARSNLPRTDSPGFPSQSHTYISLSVKGMMCMENCGQMVQQALGEVSGVRSVTVHFPTRTASVQVKPGSNVAIADLTNALEVIGFESKCVATS-----------------------------------------------TSEESTLEEAGVNAVWAIASALGLVDRGCAMAWGDACNCG-DGCKCVNCSQH 2851
            G  A+ARS            +  TY+SL+V+GMMCM +CG+ V++ L  V GV +V+VHFPTRTASVQV P S   I  L   LE +GF++ C++                                                 TSEE  + ++  NAVWAIA  LGLVDRGC M+WG AC C  D C+C NC  H
Sbjct: 1039 GDTAHARSPTSAPXXXXXXXRRATYVSLAVEGMMCMRDCGETVRRCLAGVPGVVTVSVHFPTRTASVQVDPASGAGIETLVERLEAVGFQATCISRCAVDMQSMCRVMRNVRSSQGTLRVLQSIXXXXXXXXXXXXXXXXXXXXTSEEPMVAQSE-NAVWAIAEVLGLVDRGCPMSWGGACACDPDKCRCTNCDVH 1233
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12372.1790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC61_ECTSI4.160e-5663.54Putative copper transporter n=1 Tax=Ectocarpus sil... [more]
A0A6H5KKC5_9PHAE7.890e-3061.67HMA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMV3_9STRA1.320e-2338.27HMA domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12372contigH-elongata_contig12372:1052..8603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.2
Seed ortholog evalue6.1e-55
Seed eggNOG ortholog2880.D8LC61
EggNOG OGs28KZG@1,2QT78@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-7 domain protein, putative copper transporter
Ec32 orthologEc-20_004580.1
Exons8
Model size4973
Cds size1737
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12372.1790.1prot_H-elongata_contig12372.1790.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12372 3600..6589 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929728.8832638-UTR-H-elongata_contig12372:1051..15281622929728.8832638-UTR-H-elongata_contig12372:1051..1528Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 1052..1528 +
1691679135.4832294-UTR-H-elongata_contig12372:1051..15281691679135.4832294-UTR-H-elongata_contig12372:1051..1528Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 1052..1528 +
1622929728.9053133-UTR-H-elongata_contig12372:1924..20911622929728.9053133-UTR-H-elongata_contig12372:1924..2091Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 1925..2091 +
1691679135.4937084-UTR-H-elongata_contig12372:1924..20911691679135.4937084-UTR-H-elongata_contig12372:1924..2091Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 1925..2091 +
1622929728.9218826-UTR-H-elongata_contig12372:2232..23171622929728.9218826-UTR-H-elongata_contig12372:2232..2317Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 2233..2317 +
1691679135.510252-UTR-H-elongata_contig12372:2232..23171691679135.510252-UTR-H-elongata_contig12372:2232..2317Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 2233..2317 +
1622929728.9455686-UTR-H-elongata_contig12372:2572..27081622929728.9455686-UTR-H-elongata_contig12372:2572..2708Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 2573..2708 +
1691679135.518964-UTR-H-elongata_contig12372:2572..27081691679135.518964-UTR-H-elongata_contig12372:2572..2708Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 2573..2708 +
1622929728.960428-UTR-H-elongata_contig12372:3242..35991622929728.960428-UTR-H-elongata_contig12372:3242..3599Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 3243..3599 +
1691679135.5342214-UTR-H-elongata_contig12372:3242..35991691679135.5342214-UTR-H-elongata_contig12372:3242..3599Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 3243..3599 +
1622929729.0430799-UTR-H-elongata_contig12372:6589..86031622929729.0430799-UTR-H-elongata_contig12372:6589..8603Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 6590..8603 +
1691679135.6019864-UTR-H-elongata_contig12372:6589..86031691679135.6019864-UTR-H-elongata_contig12372:6589..8603Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12372 6590..8603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929728.9728734-CDS-H-elongata_contig12372:3599..49881622929728.9728734-CDS-H-elongata_contig12372:3599..4988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 3600..4988 +
1691679135.5464664-CDS-H-elongata_contig12372:3599..49881691679135.5464664-CDS-H-elongata_contig12372:3599..4988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 3600..4988 +
1622929728.9838734-CDS-H-elongata_contig12372:5616..57701622929728.9838734-CDS-H-elongata_contig12372:5616..5770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 5617..5770 +
1691679135.562526-CDS-H-elongata_contig12372:5616..57701691679135.562526-CDS-H-elongata_contig12372:5616..5770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 5617..5770 +
1622929729.0110402-CDS-H-elongata_contig12372:6054..61491622929729.0110402-CDS-H-elongata_contig12372:6054..6149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 6055..6149 +
1691679135.5722497-CDS-H-elongata_contig12372:6054..61491691679135.5722497-CDS-H-elongata_contig12372:6054..6149Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 6055..6149 +
1622929729.0294535-CDS-H-elongata_contig12372:6490..65891622929729.0294535-CDS-H-elongata_contig12372:6490..6589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 6491..6589 +
1691679135.5813072-CDS-H-elongata_contig12372:6490..65891691679135.5813072-CDS-H-elongata_contig12372:6490..6589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12372 6491..6589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12372.1790.1

>prot_H-elongata_contig12372.1790.1 ID=prot_H-elongata_contig12372.1790.1|Name=mRNA_H-elongata_contig12372.1790.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=579bp
MRRTRTRPSAVPPPPLADVRCCTGYASPPLPSIASMGMMRQMPDPRATEA
LECVPYLRKPILTFAAGVNDPPAPLSSPDLTSSVDGRPNPRLPVSFFDEK
VKVKVSARSTQAPSKEEAGVRSSSEASRNVQRPLPNFSSIASSPKRDCAA
FRLERVRNLTGSLAAAVGDPPEPSNVTASDPFFSPEDVPLAKYFAGKRSN
NRCDDVAALALRRVSGPAQRHDHGGSERSPLLESLLPPSRLHSPNLTPPL
STDYRLATLAAQPRVADGGSDDIVEGWPQHPYPKVAEPYHVSGGRKDPSD
VPMWTGVAPGAFAADPPPVDVTATARRATAPLPASAACGNSLSPSEGNPL
GAPQDDDPMVVSESMKELPQPNMVTQPHSSEDSFAEDDTQEGVPAGVKAN
ARSNLPRTDSPGFPSQSHTYISLSVKGMMCMENCGQMVQQALGEVSGVRS
VTVHFPTRTASVQVKPGSNVAIADLTNALEVIGFESKCVATSTSEESTLE
EAGVNAVWAIASALGLVDRGCAMAWGDACNCGDGCKCVNCSQHMKKVSHA
VDLVLKAVDLSSTSNPTSPAQGSPAPSK*
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mRNA from alignment at H-elongata_contig12372:1052..8603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12372.1790.1 ID=mRNA_H-elongata_contig12372.1790.1|Name=mRNA_H-elongata_contig12372.1790.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7552bp|location=Sequence derived from alignment at H-elongata_contig12372:1052..8603+ (Himanthalia elongata Himel1 dioecious)
GCTCTCGAGTGACAATGCAAGGTCTGCTTGACACGGCAGAGAGAGAATTT
ATGGTCGCGGGATGGAGATCTCCTTCCACCCCCGTCTTGGACTTAGCTCA
CGCGCCGCAGAGACCACTGTCGTCAGCACCACATATCGCTCAGAGGAGTG
TTGAAGATAACATCAGCAAGGGCAGACGATCGCAGATCGTCCCCGCTTCC
CTCGGCACCCAAGCAACCATTTTGTCCGACGCAGCCATCCGGAAATCGAA
TGAGAACGCTCCGGACTCGCGCTTGGCCTTGGATGATGCTGTGAGAGTCG
ATAGGAGAGGAGCCAAGCGCCAGAGAGTATGTTCCGAATTTGACGGTGAT
AGCGGACCCAGAGCAACCCTGCCCCCGCCTAGTCGCCAGGACACGGACAT
ACTGGTAGCACCGCTTGGTTTGCCCTCCACATCGGAGGAAAACGGATCTA
TCCCCACCGAAATTGGACAAATATCAGGTACTGGATCCTACCTCATTCAT
GATAGCCAATCTACCCCGCAGTGCAGTACTGCTTTCTGTATTAAGAGCGT
AATGTATACTCCGACTTAACTTTGGAAATAATGCAGACAGTTTGTTCTTG
ATGTCACTTTCTGCCGATGGGGCCATTCAACTTGCTAGGCTGCCAATCTC
ACCAACCGAGACGCTGCCCCTCCCGCCTGTAGTCCTAAGCGATCTCCTCA
TATCTACCCTCTCCACAACTACGCGGCTATATGTGCACCTACATGTCTGT
AGTGTCCACTCTGAATCTCATTGCCGTAATCGAAACAAACCACCCTTGAG
TGATTTGAAATTTAAATGATTGTGGTGATGCGGCGCTACTTGGTAACTGT
ACATCCACTGTTGCAATGCCCAGGTCACGATCGTCGGGCCAGAGCCCGCC
TAGACGAATACCACGACGCGGAAGCCCCGTCGACCCGCTGTCAGTACGAG
AGCTGTACGAAGCCCGCCCGGGGCTCTGGCCGTCCGTTCTGCCGACGCCA
CGGCGAGGGGCGTCGCTGTAAGGAACCCGGCTGCAACAAGGTGACCGAGG
TGGAGCGATACCGCAATGTCGCGACGATCGAGAGGGAGGCCTTAGACAGA
GAGGTGTAACAGGGTCCTGGAGAAAATAGCTAACCGCCACGCGTTCCCAC
CCTTCTCTCTTTTATCCGCATAAATCTCCAGGTGGACGTTGGGGGGGGGA
ACTGTCGGAGGCATGGAGGGGGGCGACGTTGTGGAGCCGATGGCTGCCTG
AAGACCGATGTTGGAGGTGACCGCATGCGCTTTCCGGCACGCGCAGAAGC
TACGACAAGGAAATTTCGTTTTGTGGTGCCCGTAGCATACAACACCTTTC
TGGAACATTCTCCGCGGAAATTGAATGAAGCGCCCCGCTTAGAGCCCAGC
CTGGTCTGTACTAGGGGTTATTATTGTAAGTCAAGTACCACACGCGCCAC
GCTGAGTGGGGGTGTTGTTATTTTTTTTCCCACCGATAAAAATCTCGCCC
GTCACACCTTTCATGGAAAAGGTGGGTTTTGCGTCAGCCATGGAGGCGGA
AAACGATGTCAGGCCGAGGGATGCGCGAAGGGAGCGCAAGCGGGGGGAGT
GTTCTGCAAATCGCACGGCGGCGGAAGGCGATGCCGGATCGCAGGGTGCA
ATACAAGGTGAAAGCGTGCGAAGCAGCAGACGACCATGCTCCATCCCGAG
GGTAAATTCTGAATGGGTATACAGGGTGACTTGTGTAATCCGTCGAGCTA
AAAGGCATTATTAATAATAATGTTGGGCGTGTTTTTATCAGACGACGGAC
TGTCATGACGTCATTACCCTTTTGAGGAGGACAGAGGAATGTCGTGTTGC
TCATCACTTGAACAGGGTCCCAGGGTTGACCCCGAGGGTAGAAGGTGACT
TGACATTTTTTTCCCAAGTCTTCTGGAGACTATAAAATAAGACGCTCGAT
CGCTCCTCTTTTATCACCTCGCCGTAATGAGGGCGTTATTTTCTTGCTGT
GGTGGACAGCACCCTACCAGACACAAGTCAATTTTCTGCTATTCTTTTTG
GTCCCCTGCACGTAGAAGGGTGTTGTCCTGCGCCTCAAGACTTTTCGCAC
ACGTTTGCTTACGTGCTAAATACCCTATCCTATCCTACCCGTCCCTCCCC
CTGGGTTGTTGAACGCCATTGTCATTTTTCGGTCTCCGCAGCGCTCAAAG
CGGTGCGGATGTGTTGTGCATTAAGCACGGCGGTGGCAAGCGGTGCCTTG
TGGCGGGCTGTCGGAAACTCGTGCGCAAGAGCAACCGATGTACGAAGCAC
GCGTCGCAAGGGTCAGAGATCGTTGCGGCGGCCGAGGCAGTAACCGCGGC
GGCTCCAACCGGCACGGTGGATTCAGCTGGCGCGGAAGATCCAACCGGCA
CGGCGGGTTCAACTGACACAGAAGATCCAACCGGAGAGCAGTGTCTTTCC
TCGCCGACATCCTACCTCGACTCCAGAAAATCTGCCGAAGTACCGTATTT
ATCTCAAACACAAGAGAGTGGGACCGTCTCCGGTAACCGTCCAAGCGAAT
GCGGAGAACTCGAACGCGACCGAGCGCCGTCCCCCCCCCCCCTCTCGCGG
ATGTCCGCTGTTGTACGGGTTATGCCAGCCCACCGTTGCCGTCGATAGCG
TCGATGGGTATGATGCGACAAATGCCCGACCCGCGCGCAACTGAAGCCCT
CGAATGCGTGCCTTATCTGAGGAAACCCATTTTGACCTTTGCTGCTGGCG
TGAATGATCCCCCGGCGCCGTTATCAAGCCCCGACTTGACCTCTTCCGTC
GACGGCCGGCCGAACCCGCGGCTGCCCGTGTCATTCTTTGATGAAAAGGT
TAAGGTTAAGGTGTCGGCACGATCGACCCAGGCCCCCTCCAAGGAGGAGG
CCGGGGTACGGTCGTCGTCTGAGGCGTCGCGAAACGTTCAGCGACCGCTC
CCGAACTTTTCGTCCATTGCATCATCGCCGAAGCGTGACTGTGCCGCCTT
CCGCTTGGAACGAGTTCGTAATCTGACGGGGAGCCTCGCCGCCGCCGTAG
GAGACCCTCCGGAACCTTCAAACGTTACCGCATCTGACCCGTTCTTCTCG
CCAGAGGACGTCCCTTTGGCCAAGTATTTCGCCGGAAAGAGAAGCAACAA
CCGCTGCGATGACGTAGCAGCGCTTGCCCTTCGCCGCGTGTCGGGACCCG
CTCAAAGACACGACCACGGCGGGAGCGAGCGGTCTCCGCTTTTAGAATCG
TTGCTTCCTCCGTCGCGTCTCCACTCTCCCAATTTGACCCCACCGCTTTC
TACGGACTACAGGCTGGCTACGCTTGCTGCTCAGCCGCGTGTGGCAGATG
GCGGTAGCGACGATATTGTCGAAGGTTGGCCGCAACACCCCTATCCCAAG
GTAGCGGAACCGTATCATGTAAGCGGGGGGAGAAAGGACCCGTCGGACGT
GCCTATGTGGACTGGAGTGGCGCCAGGAGCGTTCGCAGCGGATCCTCCAC
CAGTAGACGTTACTGCTACTGCGCGCCGTGCTACCGCCCCGCTTCCAGCT
TCCGCCGCTTGCGGAAATTCTTTGAGTCCCTCTGAAGGGAACCCCCTTGG
CGCGCCACAGGATGATGACCCGATGGTAGTCTCGGAAAGCATGAAGGAGC
TTCCACAGCCAAACATGGTAACCCAGCCTCATAGCAGCGAAGATTCATTT
GCGGAAGATGACACACAAGAAGGCGTGCCCGCTGGTGTTAAGGCCAACGC
GAGATCAAACTTGCCGAGGACTGACTCTCCTGGGTTCCCATCGCAGTCGC
ATACTTACATCAGCCTTTCCGTGAAGGGGATGATGTGCATGGAAAACTGC
GGGCAGATGGTGCAGCAAGCGTTGGGGGAGGTGTCCGGCGTCCGAAGCGT
TACGGTGCACTTTCCAACGAGAACGGCGTCGGTGCAGGTGAGCTTCTCGT
ACCGATATAGAGCGCGCACGGACACTGCTGAAGAGGCAAGAAACTTTGCC
TCGAGATAACCCCGCGGGCGGGCGTGTCGATGGGAGTGTATTTCGGAACT
GCAGTGGTTTATACAACGTATTTCCGATGGGACCGTCTTTACTCAACTAC
AGTAAGTGGTACCGGTATTGATTACGGGTTTTGAGGATTCCGGCCCAGTT
TTTATGTCGAGCTCTAGCGCACGAAACGCTCCGTGCGGGTGGTGTCGCAG
TTTAGCGACAGCCGCTCGATGGAGGGGTAATACCGAGAGAGGCGATGCGG
CCCCCGAACGGTACCACGCAGTAATACGTCACATTTGCACAATTTTCCTG
GTGTCGTCGCACGTACACTATTAGTAGCGACATTTTTGAGTCATTAGTAG
CGACATTTTCGAGTCTTTTGAGAACAAATCGACGAGCGAGACATCGTTCG
TTCGGACGTGAAAACCATAGCAAACAAGGGTGTGTAGATGAGATCCTAAA
ACAGCAGCTGCCGAAGCAGTAGCAGTAGCAATAGCAATAGCAACAGTAAC
AGTAGCGACTACACTACACCCAAGAAATATGATTATTTTTGTGTCCCGCG
TGCGTCATGCGCTAGGTAAAGCCCGGATCCAACGTGGCCATCGCCGACTT
GACCAATGCACTCGAAGTCATTGGCTTCGAGTCGAAGTGCGTCGCCACGT
CTACATCCGAAGAGTCCACCCTCGAAGAGGCAGGGGTGAACGCAGTCTGG
GCGATCGCCAGTGCGCTGGGTGAGTTTATTTCGGCCTCACTTGTGCCCCC
ATAAAATCATGCGGACCGATAGGAGCCGGCAGTAGCCGAAGAGGTGGAAG
TCGGGTTCCTACCCTTAGGCCACCAGTACCCCGCTTGGGCTGAGACACTG
GTTTCAGCAATCCGTTCTTCCATACCCCCCAGAGGGCCACCCATCGTCTA
TCGTTCTTCGCCGCTCGCTTATGATCCAGCACCAAACCTCACGTGACACC
CGCCTTCCCCTTGCGACCCGCGCTGCCTCGCCTTTATCTTTTGACTGTCG
CAGGTCTCGTGGACAGGGGTTGCGCCATGGCCTGGGGAGACGCTTGCAAC
TGCGGGGATGGATGCAAATGCGTCAACTGCTCTCAACACATGAAAAAGGT
TGGATCGGGGATTAACCGAACTGGGCCCCACCTTGGCTATTTCGTCATTT
GTGTTGGAATTGTTTCCCCGTGTTTATGCTGTGCTGTCGTTTTCCCGTTT
TTATGCTGTGCTGTCGTTTTCCCGTTTTCCGTGCGGCTTACGTTCTAAGC
TTTGGGCCTCTACCACCTTGCCCTCTCGAGCCCCAAGCGGTTGCTGCTCG
ATTCTGCCTCGTATACCACTCGACACCAGCTACATTGGGTTCGATTTTAT
TCGACTATATAGTATTTGACTGGGGACTCGAGCGTTGCATGTCTTTGAAA
TGCGCGCGCACGCTGTTTTTCGATCCCCTCTTTCTTAAGGTTTCCCACGC
CGTCGACCTGGTGTTGAAGGCGGTGGACTTGAGCAGCACCTCGAATCCGA
CATCTCCAGCGCAAGGGAGCCCAGCCCCTTCCAAATAACGAGATGGTTAT
TAATTTTACTAAAAACAGAGTGTAATCGCGGGTTAGGGGCACGTCTACAT
CGGACGTAGCGTAAGGGGTAGGTCTAGCTGATTCGGGTCTAATTTGATGT
CTTCTGAGGACGTAGTGGGTATGTGCGGTGCTCCGTGTTTGCTTTTGCCG
GGACGGAACGGGACATCTAGGTACCAATGTGCTGCCATTTCTGTTGATGT
TCTGCATCATGGTTCACTCGAATATTGTTTTTGTTCTCATCCCATTTTGA
TACCCTTCGATACCGGTAGACACGAAAAGCGAACAGCCGTGTCTCGTGGT
AAAATAATCGTACAGACAGATAAAGGATTGCTGTTTCAGAGGTATAGTGT
TTGTGTTTATGGCGAAGGTCTCCGTTTTGATGTAAACTGTCTTTTCAGTC
CCACCTTCTCGAGAAAAAGAGAATTAATAGCGAGTTTAAAGCTTGGAGTT
TGTGGACGTTTGCGGCCTTTCCGCCCGATGCGGTTGGGATGACTTGAAGT
CAATACACGAGTCACAACCCTAACGCAAAAAATGAGAAGAAGATGGATGC
TTGAGGGGGGGAGGGGATGCTTGAGGCAAAGCCCATCGATAGAAAATATG
GCGTGTGACTGAGAAGGCTTCTCACAGTGTCTTCTCGAATTGATAAAATA
ATTTAGAGGCGAAACGTAGCCAATTTTTAATTTAGCGGTCAAGCCTACTT
ACCTACCTCCTTGCATTGTTTCTATTGTTGTATTGTTGTCGTGTTGTGGT
GGACACGATGGTCCCCAGAGGTTGGAGTGGTTGAGAGAAGCGTGAGAGTA
ATCTAACGATAGGGGGGAGATGCGAACTTACTCCCCTCCCCCCGATCTTT
GGATTGATCGCCACGGGGAGTCAGGCAGCCAGTCAGCGAAAATAACCCCT
TCCTTCTTCATGTTGGATTTTCTTCTGTTCTTTTGATTTTTCTTTTCTTT
CCACTTATCGATTCTTATCGTGGGCGGTTCGACGCCTTCCCCCGATCACA
TTAAGTTTTGCTATTGATGCTTCGATTTTGTAAAGACGAGAAATCGCATT
GTTTCTACACAGTAGGATGATGGTACCAAGATGGCGAGGTTCTCGAGAAA
TCGCTGTACAGTGCTATCCATTTCGCGTGTGTTGTGTCGGTAGGTGTGGC
GGGGTGCGGTAGTTCGTTCGGGTTTATCTATTCTTTTAATGTGTACCTTA
TGTGCTTGTCTAGAGCTATCTCTGGTCAGTACTTGTAGTGATCGTACTTT
GGGTAAACGCATGGGTGTCTGGTGATATGATATTCAAAAAGAAAGATCGG
CCGCTGCTCCGTACAGTACAGTAGCCATAATTTTGTGCAGCCAAGCGTTC
CCCCTGAACACGAAAACAATAAAAATTGCCCATTTTTGCTTTGCCAGGGT
CGTGTGGGCGGTAAAAAATAAAAGGCAGCGGTGTGAGATTTTGTGATTAT
TTTTTCCTTCTTACGAGTTGGTGACACAAACTTGTTCTCTATTCGGGGTT
GTTTTTGGTAGGTTTGATTGTTTTTGCCTTGTCTTTACTCTCCAGAAACA
TGTCACCGACCGACGGAATAACTCTTGCGGTGGATGTAGTATAACTTTCG
TGTGTGTATACCGCACGGTCGAACGAACTTCGATATCTGGTGATAATAAT
TACCGTACGGTATCCAGTACAAGACTGCATCCTAGCTGACTGTATACAAC
CTAGGATACGGCATCCAGCACCCTGTCAAGATAGATCGAACGTGCTGTAG
TATCGAATGTTTTCTTTTTCGTCGGTCGCTCTCTGGAAGAAGAGTAGACA
GTAGACATAATGCGCTATGTATCCTATACTACCATTAGTCGGTGAGGGAA
AAGAGAGGCGTACAATAATTGGTCAATGGAGTTACCATAGATATGTTGTT
GTTGTTGGTCACACATTTAGCAGAAGGTCAACCGTATTTGGTTGCCTTCA
GCTCGTGGTCAGCTGAACAGGGAAAATAATTTCCCCCTGTCCCCGTTCGA
GC
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Coding sequence (CDS) from alignment at H-elongata_contig12372:1052..8603+

>mRNA_H-elongata_contig12372.1790.1 ID=mRNA_H-elongata_contig12372.1790.1|Name=mRNA_H-elongata_contig12372.1790.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3474bp|location=Sequence derived from alignment at H-elongata_contig12372:1052..8603+ (Himanthalia elongata Himel1 dioecious)
ATGCGGAGAACTCGAACGCGACCGAGCGCCGTCCCCCCCCCCCCTCTCGC
GGATGTCCGCTGTTGTACGGGTTATGCCAGCCCACCGTTGCCGTCGATAG
CGTCGATGGGTATGATGCGACAAATGCCCGACCCGCGCGCAACTGAAGCC
CTCGAATGCGTGCCTTATCTGAGGAAACCCATTTTGACCTTTGCTGCTGG
CGTGAATGATCCCCCGGCGCCGTTATCAAGCCCCGACTTGACCTCTTCCG
TCGACGGCCGGCCGAACCCGCGGCTGCCCGTGTCATTCTTTGATGAAAAG
GTTAAGGTTAAGGTGTCGGCACGATCGACCCAGGCCCCCTCCAAGGAGGA
GGCCGGGGTACGGTCGTCGTCTGAGGCGTCGCGAAACGTTCAGCGACCGC
TCCCGAACTTTTCGTCCATTGCATCATCGCCGAAGCGTGACTGTGCCGCC
TTCCGCTTGGAACGAGTTCGTAATCTGACGGGGAGCCTCGCCGCCGCCGT
AGGAGACCCTCCGGAACCTTCAAACGTTACCGCATCTGACCCGTTCTTCT
CGCCAGAGGACGTCCCTTTGGCCAAGTATTTCGCCGGAAAGAGAAGCAAC
AACCGCTGCGATGACGTAGCAGCGCTTGCCCTTCGCCGCGTGTCGGGACC
CGCTCAAAGACACGACCACGGCGGGAGCGAGCGGTCTCCGCTTTTAGAAT
CGTTGCTTCCTCCGTCGCGTCTCCACTCTCCCAATTTGACCCCACCGCTT
TCTACGGACTACAGGCTGGCTACGCTTGCTGCTCAGCCGCGTGTGGCAGA
TGGCGGTAGCGACGATATTGTCGAAGGTTGGCCGCAACACCCCTATCCCA
AGGTAGCGGAACCGTATCATGTAAGCGGGGGGAGAAAGGACCCGTCGGAC
GTGCCTATGTGGACTGGAGTGGCGCCAGGAGCGTTCGCAGCGGATCCTCC
ACCAGTAGACGTTACTGCTACTGCGCGCCGTGCTACCGCCCCGCTTCCAG
CTTCCGCCGCTTGCGGAAATTCTTTGAGTCCCTCTGAAGGGAACCCCCTT
GGCGCGCCACAGGATGATGACCCGATGGTAGTCTCGGAAAGCATGAAGGA
GCTTCCACAGCCAAACATGGTAACCCAGCCTCATAGCAGCGAAGATTCAT
TTGCGGAAGATGACACACAAGAAGGCGTGCCCGCTGGTGTTAAGGCCAAC
GCGAGATCAAACTTGCCGAGGACTGACTCTCCTGGGTTCCCATCGCAGTC
GCATACTTACATCAGCCTTTCCGTGAAGGGGATGATGTGCATGGAAAACT
GCGGGCAGATGGTGCAGCAAGCGTTGGGGGAGGTGTCCGGCGTCCGAAGC
GTTACGGTGCACTTTCCAACGAGAACGGCGTCGGTGCAGATGCGGAGAAC
TCGAACGCGACCGAGCGCCGTCCCCCCCCCCCCTCTCGCGGATGTCCGCT
GTTGTACGGGTTATGCCAGCCCACCGTTGCCGTCGATAGCGTCGATGGGT
ATGATGCGACAAATGCCCGACCCGCGCGCAACTGAAGCCCTCGAATGCGT
GCCTTATCTGAGGAAACCCATTTTGACCTTTGCTGCTGGCGTGAATGATC
CCCCGGCGCCGTTATCAAGCCCCGACTTGACCTCTTCCGTCGACGGCCGG
CCGAACCCGCGGCTGCCCGTGTCATTCTTTGATGAAAAGGTTAAGGTTAA
GGTGTCGGCACGATCGACCCAGGCCCCCTCCAAGGAGGAGGCCGGGGTAC
GGTCGTCGTCTGAGGCGTCGCGAAACGTTCAGCGACCGCTCCCGAACTTT
TCGTCCATTGCATCATCGCCGAAGCGTGACTGTGCCGCCTTCCGCTTGGA
ACGAGTTCGTAATCTGACGGGGAGCCTCGCCGCCGCCGTAGGAGACCCTC
CGGAACCTTCAAACGTTACCGCATCTGACCCGTTCTTCTCGCCAGAGGAC
GTCCCTTTGGCCAAGTATTTCGCCGGAAAGAGAAGCAACAACCGCTGCGA
TGACGTAGCAGCGCTTGCCCTTCGCCGCGTGTCGGGACCCGCTCAAAGAC
ACGACCACGGCGGGAGCGAGCGGTCTCCGCTTTTAGAATCGTTGCTTCCT
CCGTCGCGTCTCCACTCTCCCAATTTGACCCCACCGCTTTCTACGGACTA
CAGGCTGGCTACGCTTGCTGCTCAGCCGCGTGTGGCAGATGGCGGTAGCG
ACGATATTGTCGAAGGTTGGCCGCAACACCCCTATCCCAAGGTAGCGGAA
CCGTATCATGTAAGCGGGGGGAGAAAGGACCCGTCGGACGTGCCTATGTG
GACTGGAGTGGCGCCAGGAGCGTTCGCAGCGGATCCTCCACCAGTAGACG
TTACTGCTACTGCGCGCCGTGCTACCGCCCCGCTTCCAGCTTCCGCCGCT
TGCGGAAATTCTTTGAGTCCCTCTGAAGGGAACCCCCTTGGCGCGCCACA
GGATGATGACCCGATGGTAGTCTCGGAAAGCATGAAGGAGCTTCCACAGC
CAAACATGGTAACCCAGCCTCATAGCAGCGAAGATTCATTTGCGGAAGAT
GACACACAAGAAGGCGTGCCCGCTGGTGTTAAGGCCAACGCGAGATCAAA
CTTGCCGAGGACTGACTCTCCTGGGTTCCCATCGCAGTCGCATACTTACA
TCAGCCTTTCCGTGAAGGGGATGATGTGCATGGAAAACTGCGGGCAGATG
GTGCAGCAAGCGTTGGGGGAGGTGTCCGGCGTCCGAAGCGTTACGGTGCA
CTTTCCAACGAGAACGGCGTCGGTGCAGGTAAAGCCCGGATCCAACGTGG
CCATCGCCGACTTGACCAATGCACTCGAAGTCATTGGCTTCGAGTCGAAG
TGCGTCGCCACGTCTACATCCGAAGAGTCCACCCTCGAAGAGGCAGGGGT
GAACGCAGTCTGGGCGATCGCCAGTGCGCTGGGTAAAGCCCGGATCCAAC
GTGGCCATCGCCGACTTGACCAATGCACTCGAAGTCATTGGCTTCGAGTC
GAAGTGCGTCGCCACGTCTACATCCGAAGAGTCCACCCTCGAAGAGGCAG
GGGTGAACGCAGTCTGGGCGATCGCCAGTGCGCTGGGTCTCGTGGACAGG
GGTTGCGCCATGGCCTGGGGAGACGCTTGCAACTGCGGGGATGGATGCAA
ATGCGTCAACTGCTCTCAACACATGAAAAAGGTCTCGTGGACAGGGGTTG
CGCCATGGCCTGGGGAGACGCTTGCAACTGCGGGGATGGATGCAAATGCG
TCAACTGCTCTCAACACATGAAAAAGGTTTCCCACGCCGTCGACCTGGTG
TTGAAGGCGGTGGACTTGAGCAGCACCTCGAATCCGACATCTCCAGCGCA
AGGGAGCCCAGCCCCTTCCAAATAAGTTTCCCACGCCGTCGACCTGGTGT
TGAAGGCGGTGGACTTGAGCAGCACCTCGAATCCGACATCTCCAGCGCAA
GGGAGCCCAGCCCCTTCCAAATAA
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