mRNA_H-elongata_contig1237.1787.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: D7FRA4_ECTSI (Plastid ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA4_ECTSI) HSP 1 Score: 659 bits (1699), Expect = 8.350e-231 Identity = 340/435 (78.16%), Postives = 383/435 (88.05%), Query Frame = 1
Query: 1 RVAAALVATTAFAEGFAFTPSALYCAGKARHGALWTGDTSASRSRVVPCMVVTDIDEVVGTET----DENAPAVTTPSRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASLQDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPMGDGDDN 1293
RV AAL A+ + A GFAF PS + CAG R GA W G+ ++RSRV PC V+T++DEVVGTET D + V P+RF++IK YKG+T+ALDLS+E+ AYEDF +LL + KVSF RGEIVKGTV+QFEPSGALIDIGAK+TAYMPAREASL +V+++E LEL+E DVMIIS+EN+MGQVQVS RRI+YEKAW KV++MQ D VFE P++A+NRGGAIVLVEGLRGFLPGSH+CGGLPTE+ +GK M +KFLEVN E SKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSI+ MGM LKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAP+G+GD++
Sbjct: 5 RVIAALAASASVANGFAFAPS-VRCAGNVRPGASWVGEAQSARSRVAPCRVMTEVDEVVGTETEGDLDGDVSFVEPPNRFDKIKAQYKGVTTALDLSEETAAYEDFQTLLTDNKVSFERGEIVKGTVIQFEPSGALIDIGAKATAYMPAREASLDEVESMEGLLELDETMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEDMQAEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKYKFLEVNAENSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPIGEGDNS 438
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A835Z197_9STRA (Plastid ribosomal protein S1 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z197_9STRA) HSP 1 Score: 468 bits (1205), Expect = 1.690e-157 Identity = 236/349 (67.62%), Postives = 295/349 (84.53%), Query Frame = 1
Query: 220 SRFERIKESYKGMTSAL-DLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASLQDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVL 1263
S FE++K +KG + D +++ +Y+ F +L EQ+VSF RGE V G VVQ+E G L+DIGAK++AY+P REA+L ++IEA +++ + M+IS+EN+MGQV +S RR+E+EKAW++V +M D VF++ VVA+N+GGAIVLVEGLR FLPGSHLCGG+P+EE++G+ + FKFLEVN ET+KLVVSNRRAV+E EM+EL+RGDVVEG +KAIKPYGAFVEIRGMSGLLHISQIS+DRIEDL +I+ +GM +KCMIIDHDKV GRIALSTKTLEPEPGDM+KNPQKV+D+AE TAAKYH+RME ERKARE+AAK IVMGLGDGLDSFD+DVLAGI DGI+SVL
Sbjct: 3 SHFEKMKMRWKGPPKRIFDTAEDDESYQQFADMLSEQQVSFNRGETVTGVVVQYEQRGLLVDIGAKASAYLPLREAALVPCEDIEALFNIDDSVEFMVISDENEMGQVTLSVRRLEFEKAWQRVDDMHKADTVFDAEVVAVNKGGAIVLVEGLRAFLPGSHLCGGVPSEELVGRMLPFKFLEVNSETNKLVVSNRRAVVETEMQELARGDVVEGFIKAIKPYGAFVEIRGMSGLLHISQISYDRIEDLGAIVQVGMAVKCMIIDHDKVAGRIALSTKTLEPEPGDMLKNPQKVFDLAEETAAKYHERMEAERKAREEAAKVIVMGLGDGLDSFDTDVLAGITDGIDSVL 351
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S2H459_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H459_9STRA) HSP 1 Score: 412 bits (1059), Expect = 1.560e-134 Identity = 213/361 (59.00%), Postives = 281/361 (77.84%), Query Frame = 1
Query: 220 SRFERIKESYKGMTSALDLSDESM--AYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASL--QDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSF---------DSDVLAGIADGIESVL 1263
+RF+R+K+SYKG +DLSDE + +Y +FD + +F R ++VKGTVVQ++ G ++DIGAK++A++P EA+L + IE+ +++++ERD IISEE++ GQ+ VS RRI+Y +AW+KV M +D VFE+ V +NRGGAI LVEGLR FLPGSHL G LPTE+++G+T+ KFLEVN E +KLVVSNRRAV+E++M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL +L G +KCMIIDHDKVNGRIALSTKTLEPEPGDM+++P +VYDMAE TAA+YH+RME ERKARE+AAK IV+GLGD LD DSD LA ++D ++S+L
Sbjct: 59 TRFDRLKKSYKG--PKIDLSDEGLDFSYGEFDEAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPINEAALVLEQGAQIESVIDIDQERDFQIISEEDENGQLLVSVRRIQYREAWDKVVAMNADDGVFEATCVGVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMADLSRGDIINGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGDQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPARVYDMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTGDGDGEGGDSDPLADVSDNLDSLL 417
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S2S0K1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S0K1_9STRA) HSP 1 Score: 410 bits (1053), Expect = 9.750e-134 Identity = 211/365 (57.81%), Postives = 282/365 (77.26%), Query Frame = 1
Query: 208 VTTPSRFERIKESYKG-MTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASL--QDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDV----------LAGIADGIESVL 1263
V TP+RF+R+K+++KG M + + + Y DFD+ + F R +V GTVVQFE +G ++DIGAK++A++P EA+L + D+IE +EL++E V IISEE++ GQ+ VS RRI+Y +AW+KV+ +QT D VF++ V+A+NRGGAI LVEGLR FLPGSHL G LPTE+I+G+++ KFLEVN E +KLVVSNRRAV+EQ+M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL +L G +KCMIIDHDKVNGRIALSTKTLEPEPGDM+++ KV+++AE TAAKYH+RME ERKARE++AKSIV+ LGD LD ++D LA ++D ++S+L
Sbjct: 46 VATPTRFDRLKKNWKGAMPEKVSTENLNFDYSDFDAAVASVSYDFARNSVVSGTVVQFENAGCIVDIGAKASAFLPINEAALVQEQGDSIETLVELDKEMQVQIISEEDENGQLLVSVRRIQYREAWDKVRTLQTTDDVFDATVIAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDIIGQSLPLKFLEVNQEDNKLVVSNRRAVVEQQMADLSRGDIINGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDSAKVFELAEETAAKYHERMEAERKAREESAKSIVVSLGDTLDDLNNDSDADGEDAEDPLASVSDNLDSLL 410
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S3QC88_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC88_9STRA) HSP 1 Score: 405 bits (1042), Expect = 2.440e-132 Identity = 215/368 (58.42%), Postives = 273/368 (74.18%), Query Frame = 1
Query: 181 TETDENAPAVTTPSRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASL--QDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGL-----DSFDSDVLAGIADGIESVL 1263
T T N A SRF+R+K++YKG + +Y+DF + SF R ++VKGTVVQ+E G ++DIGAKS+A++P +E+SL +E+ ++L+ E D IISEE++ GQ+ VS RRI+Y +AWEKV QT D VFE+ VVA+NRGGAI LVEGLR FLPGSHL G LPTE+++G+T++ KFLEVN E +KLVVSNRRAV+EQ+M LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRIEDL +L G +KCMIIDHDKVNGRIALSTKTLEPEPGDM+ + KV+++AE TA KYH+RME ERKARE+A K IVMGLGD L D D LA ++D ++S+L
Sbjct: 26 TSTALNVAAEPIMSRFDRLKKNYKGPQVVVSSEGLDFSYDDFADAVANTDYSFNRNDVVKGTVVQYENGGCVVDIGAKSSAFLPTQESSLFMPQGATLESLVDLDTEMDFQIISEEDENGQLLVSVRRIQYRQAWEKVIAQQTEDEVFEAEVVAVNRGGAICLVEGLRAFLPGSHLTGQLPTEDLIGQTLALKFLEVNQEDNKLVVSNRRAVVEQQMSNLSRGDIIGGVVKALKPYGAFVEVGGMSGLLHISQISYDRIEDLEKVLQPGQQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLTDSAKVFELAEETAKKYHERMEAERKAREEATKDIVMGLGDSLADLTSDDEGEDPLADVSDNLDSLL 393
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A6H5K1V9_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V9_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 4.610e-132 Identity = 207/276 (75.00%), Postives = 226/276 (81.88%), Query Frame = 1
Query: 466 IEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPMGDGDDN 1293
+E LEL+E DVMIIS+EN+MGQVQVS RRI+YEKAW KV++MQ D VFE P++A+NRGGAIVLVEGLRGFLPGSH+CGGLPTE+ +GK M +KFLE AIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSI+ MGM LKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAP+G+GD++
Sbjct: 1 MEGLLELDETMDVMIISDENEMGQVQVSIRRIQYEKAWSKVEDMQAEDVVFEGPIIAVNRGGAIVLVEGLRGFLPGSHMCGGLPTEDAVGKVMKYKFLE-----------------------------------AIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSIMQMGMKLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPIGEGDNS 241
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S2BGG1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BGG1_9STRA) HSP 1 Score: 404 bits (1037), Expect = 2.610e-131 Identity = 208/362 (57.46%), Postives = 275/362 (75.97%), Query Frame = 1
Query: 205 AVTTP-SRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASLQDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPMGDGD 1287
A T P S+FER++ +KG +D + +Y+ F++ LG+ +F RG+++ G VVQ+E GAL+DIGAKS A+MP REA+L ++ + ++E RD IISEE++ GQ+ VS RR+E++ AW+KV Q D F+ V+ +NRGGAIV V GLR FLPGSHLCG +P+EEI+G++ KFLEVN ET+KLVVSNRRAV+E +M+ELSRGDVV+G VKAIKPYGAFVEI GMSGLLHISQIS+DRIEDL +++ + +KCMIIDHDKVNGRIALSTKTLEPEPGDM+K+P+ V++ AE TAAKYH+RME ER+ARE+AAK IVMGLG+ L++ S + +E +L +P +G+
Sbjct: 51 AATQPMSKFERLQSRWKGEPRPVDETKAGFSYDAFEAGLGDTSCAFARGDVIPGKVVQYEYQGALVDIGAKSAAFMPLREAALIPDGDVATAVSIDETRDFQIISEEDENGQLLVSIRRLEFQNAWDKVLASQVEDKAFDGEVIGVNRGGAIVNVHGLRAFLPGSHLCGAIPSEEIIGQSFRLKFLEVNQETNKLVVSNRRAVVEDQMRELSRGDVVQGVVKAIKPYGAFVEIAGMSGLLHISQISYDRIEDLSTVVELNSLIKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEETAAKYHERMEAERRAREEAAKDIVMGLGEDLETPFS-----ASSDLEQILSSPAAEGE 407
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S2SEK7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEK7_9STRA) HSP 1 Score: 402 bits (1034), Expect = 6.860e-131 Identity = 206/359 (57.38%), Postives = 272/359 (75.77%), Query Frame = 1
Query: 220 SRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASLQDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVLRAPMGDGDDNK 1296
++++R+ ++KG +L Y++F + L Q F RG+++ GTVVQF+ GAL+DIGAK+ A+MP REASL V ++ L++ E R+ IIS+E+D GQ+QVS RR+E++KAW+ + +Q+ D + V+ +NRGGAIV V GLR FLPGSHLCG LPT++I+G+T+ KFLEVN E +K++VSNRRAV+E +M+EL+RGDVV+G VKAIKPYGAFVEI GMSGLLHISQIS+DRI+DL +I+ +KCMIIDHDKVNGRIALSTKTLEPEPGDM+K+ Q+V+D+AE TAAKYH+RME ERKARE+AAK IVMGLGD LDS L G + + + A DG+ +K
Sbjct: 53 TKWDRMSTNWKGARRTANLDKAGFGYDEFSTFLEGQDYKFARGDVITGTVVQFDFQGALVDIGAKAAAFMPIREASLIPVSDVGEVLDIHESREFQIISDEDDQGQLQVSLRRLEFQKAWDHIMSIQSEDKALDCDVLGVNRGGAIVSVHGLRAFLPGSHLCGVLPTDDIIGQTLKVKFLEVNQENNKIIVSNRRAVVEDQMQELARGDVVQGVVKAIKPYGAFVEISGMSGLLHISQISYDRIDDLSTIIQPNTIIKCMIIDHDKVNGRIALSTKTLEPEPGDMMKDSQRVFDLAEETAAKYHERMEAERKAREEAAKDIVMGLGDDLDS----TLPGASPLGDILSPATSSDGEADK 407
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S4QHK0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QHK0_9STRA) HSP 1 Score: 404 bits (1037), Expect = 1.020e-130 Identity = 227/430 (52.79%), Postives = 297/430 (69.07%), Query Frame = 1
Query: 7 AAALVATTAFAEGFAFTPSALYCAGKARHGALWTGDTSASRSRVVPCMVVTDIDEVVGTETDENAPAVTTPSRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASL--QDVDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLD---------SFDSDVLAGIADGIESVL 1263
AAA A AF G AF P+A +A +S V E VG E + P SRF+R+K +YKG + +Y+DFDS + +F R ++VKGTVVQ++ G ++DIGAK++A++P EASL D+IE + ++EER+ IISEE++ GQ+ VS RRI+Y +AW+ V D VFE+ VV +NRGGAI LV+GLR FLPGSHL G LPTE+++G+T+ KFLEVN E +KLVVSNRRAV+E++M +LSRGD++ G VKA+KPYGAFVE+ GMSGLLHISQIS+DRI+DL +L G +KCMIIDHDKVNGRIALSTKTLEPEPGDM+++P++V++MAE TAA+YH+RME ERKARE+AAK IV+GLGD LD S SD LA ++D ++S+L
Sbjct: 51 AAASGAAVAFTVGPAFVPAA----------------NTALKSAVA---------ETVGEEAVK--PKAPQLSRFDRLKAAYKGPQIVKNDEGLDFSYDDFDSAVEATDYAFNRNDVVKGTVVQYDNGGCIVDIGAKASAFLPTAEASLIMNQGDDIEDLINVDEERNFQIISEEDENGQLLVSVRRIQYREAWDTVIAKNAEDGVFEATVVGVNRGGAICLVDGLRAFLPGSHLTGQLPTEDLIGQTLPLKFLEVNQEANKLVVSNRRAVVEEQMSDLSRGDIITGIVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGTQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLRDPKRVFEMAEETAARYHERMEAERKAREEAAKDIVLGLGDSLDDLTSSSDDDSEGSDPLADVSDNLDSLL 453
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Match: A0A7S1FV14_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FV14_9STRA) HSP 1 Score: 399 bits (1025), Expect = 1.130e-129 Identity = 223/419 (53.22%), Postives = 293/419 (69.93%), Query Frame = 1
Query: 13 ALVATTAFAEGFAFTPSALYCAGKARHGALWTGDTSASRSRVVPCMVVTDIDEVVGTETDENAPAVTTPSRFERIKESYKGMTSALDLSDESMAYEDFDSLLGEQKVSFTRGEIVKGTVVQFEPSGALIDIGAKSTAYMPAREASLQD--VDNIEAFLELEEERDVMIISEENDMGQVQVSTRRIEYEKAWEKVKEMQTNDAVFESPVVAINRGGAIVLVEGLRGFLPGSHLCGGLPTEEILGKTMSFKFLEVNPETSKLVVSNRRAVLEQEMKELSRGDVVEGHVKAIKPYGAFVEIRGMSGLLHISQISFDRIEDLPSILHMGMTLKCMIIDHDKVNGRIALSTKTLEPEPGDMIKNPQKVYDMAEATAAKYHQRMEHERKAREDAAKSIVMGLGDGLDSFDSDVLAGIADGIESVL 1263
AL+A + AFTP+A C T+ RS V E TE +AP +RF+R+K+S+KG +D S +Y DF+++L E V+F R +IVKGTVVQ+E +GALIDIGAKS+AY+P EA+L D IE +EL+ E + IIS+E++ GQ+ VS +RI+Y AWEKV +Q D VF++ VVA+NRGGAI LVEGLR FLPGSHL G +P + ++G+T+ KFLEVN E +KLVVSNRRAV+E +M +LSRGD++ G + A+KPYGAFV++ GMSGLLHISQIS+DRI+DL ++ + G +KCMIIDHDKVNGRIALSTKTLEPEPGDM+K+ +V++MAE TAAKYH+RME ER ARE+AA+ I +GLGD LD ++D ++SVL
Sbjct: 9 ALLAFLSATPAVAFTPAARKC------------PTTFIRSTAV---------EAETTEATASAPKKPQLTRFDRLKKSWKGPMPNVDTSGVDFSYGDFEAILDESLVAFNRNDIVKGTVVQYEKAGALIDIGAKSSAYLPLPEAALLQGQTDGIEDLVELDSEHEFQIISDEDENGQLLVSRKRIQYAAAWEKVASLQVTDDVFDAKVVAVNRGGAICLVEGLRAFLPGSHLTGRIPDDGLIGETLPLKFLEVNQENNKLVVSNRRAVVEAQMADLSRGDLISGVILALKPYGAFVQVGGMSGLLHISQISYDRIDDLSAVFNPGDAVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDSGRVFEMAEETAAKYHERMEAERVAREEAAREIGLGLGDDLDDIGE-----MSDDLDSVL 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1237.1787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1237.1787.1 >prot_H-elongata_contig1237.1787.1 ID=prot_H-elongata_contig1237.1787.1|Name=mRNA_H-elongata_contig1237.1787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=385bp MVVTDIDEVVGTETDENAPAVTTPSRFERIKESYKGMTSALDLSDESMAYback to top mRNA from alignment at H-elongata_contig1237:7505..15205- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1237.1787.1 ID=mRNA_H-elongata_contig1237.1787.1|Name=mRNA_H-elongata_contig1237.1787.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7701bp|location=Sequence derived from alignment at H-elongata_contig1237:7505..15205- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1237:7505..15205- >mRNA_H-elongata_contig1237.1787.1 ID=mRNA_H-elongata_contig1237.1787.1|Name=mRNA_H-elongata_contig1237.1787.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2310bp|location=Sequence derived from alignment at H-elongata_contig1237:7505..15205- (Himanthalia elongata Himel1 dioecious)back to top |