mRNA_H-elongata_contig12354.1777.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 438 bits (1127), Expect = 1.220e-134 Identity = 338/919 (36.78%), Postives = 437/919 (47.55%), Query Frame = 1
Query: 4 GGDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSLYLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASIEDPCRLIGANLCM-HPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGRQLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELGIPSGSSHAI----IMNALENHEVVKRAEGHPGTLARLAPLLCDHDLSDSHVTKMATEYRMQFRSDSTQSRRH---SHWSL-------------------NGKGD-------GTGR---------LGQCVSFDHAFSSE-----------SPLFHQPGPSAGNDG--HFLLNGGGGA------------------------------------------PRVLTGSLQHSPSSYRRRISHEEQMVQQELQEPDAPQMTPAQRRAWDTAAERGLRDRGCRLVWVEAITNAAAEHRSKGGGAPGGED---------------VVRPDRVPWKNLSKSLEHHL---LTLPSTHGQMVDQGPLGWREASGYTGAGMDGRQGLMGGYGSMSSVAPRGLNSLELNFVKGILRSKQNALR--KEKYRH---GLGRFGGSEGAVNISGRAELWTRTEARLARGGGLDEQVRVGDEDEDVISIEAFVRFSDWWAPLMITLSRLRNDWASTNPVRVEGFVGRLEADRKLLTRERGTFLLRFSESRPGALVVSFSENVRQAP--SGSGFHAAQFHRP---SLCVQHCLVTVRERGQCTIDVDDVLDGAGPISYAGLHDLVRDCSKLQTLFPNAPKEIVFTETSSPN--------------GDRMTLSPRTSNASRVGGAAAM 2340
GG+H+V IFDTLP+G F+DET+ P R Y G LQ IG + M P P S E L RFLF PT E QKVLLVL+ D+LFE GG+ARDR+++LL++LC G L+LL+TSEQ L RDT+ RFR+G+E+V KVKPL+ RDAAQLL + +P R+T+ + SH I+ ALE H V+K AEGHPGTL RLAPLL DH+++D+ V A ++R++++ ++ RR+ S+ SL +G D G GR LG +S D F + SP F AG H LLNG G A P+ T QH P RR + M Q EL+EPD PQMTP ++RAWDTA GL DRGCRLVWV+A TNA + GG GG D V D VPW L + L HL LT+PS+H ++VD+GP GWR + G G+ GYG++++ R +N EL FV+G+L++KQ +R +EK R G G ++ SG A+ A G DVIS++AFV FS WWAPLM TLS LRNDWASTNP RV GF+ R+ A+R+LL RERGTFLLRFSES+PG LVVSF+E+V QA + S +A RP S+CV+HCLV VR G C I+V+ + Y LHDLV CS +Q L+P+ KE F E S D M+L P+ + +R+ G +
Sbjct: 169 GGNHDVRIFDTLPEGRFVDETREPPARPRCARPVPFYQGLEELQ------------------------------------------------------------------------------IGLAIGMTQPGPNSEEELVRFLFDRPTVQEGRTCQKVLLVLEDVDSLFEA-GGDARDRVLKLLSNLCSKGEHLKLLVTSEQRLQRDTNERFRHGSERVAKVKPLKDRDAAQLLINKVPT--RFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLHRANQHRLEYKQETHTLRRNRAGSNTSLASSAGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQQQXXXXXXXXXVSPFFQDLSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGIHSAAAPAAARASSHPHHHQRRHSSHPQSPTHPRQHHPQ--RRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGG--GGSDNGGFGWPAEGAGAGGVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASSVGVGVG------NGYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGAAD---------AASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQ----GSKVPYPSLHDLVLACSSMQVLYPDVRKEDAFDEPSGGGPWXXXXXXXXDAALSDTMSLYPQPPDVARLSGPVGV 983
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 382 bits (980), Expect = 1.700e-113 Identity = 314/867 (36.22%), Postives = 411/867 (47.40%), Query Frame = 1
Query: 4 GGDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSL--YLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASI-----EDPCRLIGANLCM-HPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGR--QLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELGIPSGS-SHAIIMNALENHEVVKR----AEGHPGTLARLAPLLCDHDLSDS-----------------------------HVTKMA------------TEYRMQFRSDSTQSRRHSHWSLNGKG-DGTGRLGQCVSFDHAFSS-ESPLFHQP-GPSAGN--------DGHFL-------------LNGGGGAP-------RVLTGSLQHSPSSYRRRISHEE----------QMVQQELQ-------------EPDAPQMTPAQRRAWDTAAERGLRDRGCRLVWVEAITNAAAEHRSKGGGAPGGEDVVRPDR-VPWKNLSKSLEHHLLTLPSTHGQMVDQGPLGWREASGYTGAGMDGRQGLMGGYGSMSSVAPRG--LNSLELNFVKGILRSKQNALRKEKYRHGLGRFGGSEGAVNISGRAELWTRTEARLARGGGLDEQVRV-GDEDEDVISIEAFVRFSDWWAPLMITLSRLRNDWASTNPVRVEGFVGRLEADRKLLTRERGTFLLRFSESRPGALVVSFSENVRQAPSGSGFHAAQFHRPSLCVQHCLVTVRERGQCTIDVDDVLDGAGPISYAGLHDLVRDCSKLQTLFPNAPKEIVFTET 2262
GG+H+V IF+TLP+G +DET PP R P K++ Y G LQ+VV +L++ ACVT+TGEPGSGKTE A+QAC YVRERH FD +ADC KAA + + + EDPCRLIG + M P P S + L +F+F +P QKVLLVLD+ D+L E + G+A+DRLV+LL +LC G L+LL TSE LL H RFR GTE V +V+PL+ R A++LL D +PR L TELG+ SG S A ++ A++NH V+K AEGHPGTL RLAP+L D L D+ TK+A E R FR S + RR+ + N G L ++ + + SP+ P GP+ G+ D FL G +P V G + SS R + E ++ Q+LQ EP++PQM ++R D A G+ DRGCRLVWV A + A R R + V W+ L +SL HL T D P+ ++P G ++ +L F++GILR Q A+ AR G DE V G D IS+EAF +FS WWAPL+ TL +RNDWA T PVRV GF+ RL A R L+ RE GTFLLRFSES+ GALV+SF++ PS S R SL V+H LV V+ G+C I + G YA LHD VR +L+ L+P+ PKE F ET
Sbjct: 111 GGNHDVRIFETLPEGQLVDETH--PPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLE-RDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLL-SGHERFRGGTETVARVEPLETRHASELLMDNLPRNLELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRVVVAARVMVWRLFEWLLLLGATKVAYNWDLATIGSLSEECRADFRDKSYRRRRYGRPNSNRTAVSSKGELSVTMTLSSSTGAPRSPMILSPMGPAFGDTHDQRNRGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETVREGPARAHSSSPPARCRNPEWHGPPQPPPHSLLHQQLQDHRRVLAQEAPDDEPESPQMDMEEQRTRDLARAAGVVDRGCRLVWVTATSRMAGGCRQDDXXXXXXXWSSRRGKLVSWECLQESLMEHLREGTKTTRNWDD--PI----------------------------ISPHGRVADTPQLEFIRGILRRGQEAV--------------------------------ARARWGATGDECPEVDGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQ-----PSVSP------GRRSLSVKHSLVEVKWGGRCCIQAEK----GGMRCYASLHDFVRRIPELKKLYPDIPKEEAFGET 896
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 345 bits (884), Expect = 3.280e-99 Identity = 306/903 (33.89%), Postives = 403/903 (44.63%), Query Frame = 1
Query: 7 GDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSLYLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAA--APTYT-----------SXXXXXXXXXAASIEDPCRLIGANLCM-HPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGR--QLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELGIPSGS-SHAIIMNALENHEVVKR----AEGHPGTLARLAPLLCDHDLSDS-HVTKMATEYRMQFRSDSTQSRRHSHWSLNGKGDGTGRLGQCVSFDHAFS------------------SESPLFHQPGPSAGN------------------------DGHFLL-----------------NGGGGAPRV-------------LTGSLQHSPS-------------------SYRRRIS--HEEQMVQQEL--QEPDAPQMTPAQRRAWDTAAERGLRDRGCRLVWVEAITNAAAEHRSKGGGAPGGEDVV--RPDRVPWKNLSKSLEHHL---LTLPSTH-------------------GQMVDQGPLGW------------REASGYTGAGMDGRQGLMGGYGSMSSVAPRGLNSLELNFVKGILRSKQNALRKEKYRHGLGRFGGSEGAVNISGRAELWTRTEARLARGGGLDEQVRVGDEDEDVISIEAFVRFSDWWAPLMITLSRLRNDWASTNPVRVEGFVGRLEADRKLLTRERGTFLLRFSESRPGALVVSFSENVRQAPSGSGFHAAQFHRPSLCVQHCLVTVRERGQCTIDVDDVLDGAGPISYAGLHDLVRDCSKLQTLFPNAPKEIVFT 2256
G+H+V IFDTLP+G +DET LPP A S Y+G +Q VV +L++ ACVTVTG+PGSGKTE+A+QAC YVR RH F++ +ADC KAA A Y + S ED CR IG + + P P + L +F+F + T+ +P QKVLLVLD+ D+L E +GG+A+DRLV LL LC G L+LL TSE LL + F GTE+V +V+PL+ R A++LL D PR L+ ELG+ SG S A +++A +NH V+K A GHPGTL RLAP+L + L D+ + +MAT R FR S + R H +G G G S S +P P+ GN DG +GGGG PR G Q PS R R++ H QM+ +E ++P+ PQM Q+ AWD A G+ +RGCRL+WV A +N A + R G R + V W +L + L+ +L +T+P + GQ VD + R A G G + R G + A R L+ + F++GILR KQ L + G + TE RL D D IS+E F +FS WW PLM TL +RNDWA T PV V GF+GRLE D L R RG FLLRFSES PG LV+S +H H LV V E G+C + V+ G Y LHDLV +L+ L+ + P E VFT
Sbjct: 225 GNHDVRIFDTLPEGKLVDETHRLPPRPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSSEDLCRQIGVAIGIPQPGPSTTNELHQFIFPN-TDSGQPS-QKVLLVLDNVDSLLE-RGGDAQDRLVHLLGDLCSMGGGGHLKLLATSEYKLLSGNEV-FHGGTERVAEVEPLETRHASELLIDNSPRDLQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRR---SGSGTSAGSSSSLAMIAREMSEAGSSLGTSAPTSRSQCGSPAPATPSQRPAMGNAFSEDAGHGRDRKRVSLNRTNSSIDGSXXXXXXXXXXXXXPPYPDEEDGGGGLPRAHGSGPTGRCRNPRCHGRPQQQPSLGQQSGSPPGCCLRHQFAQELRDRVAMMHRRQMMAREALEEQPELPQMNMEQQHAWDMAEAAGV-ERGCRLLWVTATSNMANDWRRDNGXXXXXXXXASKRGEFVSWNHLREGLQRNLDVRMTVPCSSSGGDRHDALEGTQYTYLDDGQEVDSEEVXXXXXXXXXXXXXERAAGGERRTG-NRRMGPL-------PHATRVLDRSQWGFIRGILRKKQKELA-------------NAGVQTVD-------CTEYRL-------------DGRYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENL-RRARGAFLLRFSESHPGKLVIS-----------RAYH------------HSLVEVTEGGRCYMTVNQ--QGTRR-EYESLHDLVTQNGQLRHLYQDIPMEQVFT 1051
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 329 bits (844), Expect = 4.510e-96 Identity = 232/549 (42.26%), Postives = 289/549 (52.64%), Query Frame = 1
Query: 4 GGDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSLYLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASIEDPCRLIGANLCM-HPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGRQLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTEL--GIPSGSSHAIIMNALENHEVVKRAEGHPGTLARLAPLLCDHDLSDSHVTKMATEYRMQFRSDSTQSRRH---SHWSL-------------------NGKGD-------GTGR---------LGQCVSFDHAFSSE----------SPLFHQPGPSAGNDG--HFLLNGGGGA------------------------------------PRVLTGSLQ-----HSPSSYRRRISHEEQMVQQELQEPDAPQMTPAQRRAWDTAAERGLRDRGCRLVWVEAITNAAAEHRSKGGGAPGGED 1368
GG+H+V IFDTLP+G+F+DET+ P R Y G LQKVVEMLV+ TACVTVTGE GSGK+E A+QAC YVR RH FDA+++AD K A A S +DPCRLIG + M P P S E L RFLF PT E KVLLVLD D+LFE GG+ARDR+++LL++LC L+LL+TSEQ+L RDT+ RFR+G+E+V KV+PL RDAAQLL D +P K EL + + I+ ALE H V+K AEGHPGTL RLAPLL DH+++D+ V + T+ R++++ + RR+ S+ SL +G D G GR LG +S D F + SP F + AG H LLNG G A R + LQ H RR + M Q EL+EPD PQMTP ++RAWDTA GL DRGCRLVWV A TNA + GG GG D
Sbjct: 226 GGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAMATAINSSVWFY--------DDPCRLIGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEA-GGDARDRVLKLLSNLCSMSEHLKLLVTSEQSLQRDTNERFRHGSERVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVNDACVLERVTQCRLEYKLEPQTLRRNRASSNTSLASSVGAAGTGMGGGGVALPSGASDMSLGNSMGGGRPMTPTQPHFLGHAISHDTHFQQQHNGTGNGNGASPFFQEFSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAAXXXXXXRPSXXXXXXXRRHSAHLQSPTHPHQHRPQRRMTVVNQLMAQVELEEPDPPQMTPREKRAWDTARTAGLMDRGCRLVWVTATTNALLNGWTYDGG--GGSD 763
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE) HSP 1 Score: 222 bits (566), Expect = 1.510e-61 Identity = 148/325 (45.54%), Postives = 192/325 (59.08%), Query Frame = 1
Query: 1429 LTLPSTHGQMVDQGPLGWREASGYTGAGMDGRQGLMGGYGSMSSVAPRGLNSLELNFVKGILRSKQNALR--KEKYRHGLGRFG--GSE-GAVNISGRAELWTRTEARLARGGGLDEQVRVGDEDEDVISIEAFVRFSDWWAPLMITLSRLRNDWASTNPVRVEGFVGRLEADRKLLTRERGTFLLRFSESRPGALVVSFSENVRQA-PSGSGFHA-AQFHRP---SLCVQHCLVTVRERGQCTIDVDDVLDGAGPISYAGLHDLVRDCSKLQTLFPNAPKEIVFTETSS--PNG---------DRMTLSPRTSNASRVGGAAAM 2340
LT+PS ++VD+GP GWR G G GR G GYG++++ R +N EL FV+G+L++KQ +R +EK R L G G+E ++ SG A+ A R GG + + +VIS+EAFV FS WWAPLM TLS LRNDWASTNP RV GF+ R+ A+R+LL RERGTFLLRFSES+PG LVVSF+E+V QA P S A A RP S+CV+HCLV VR G C I+V+ + Y LHDLV CS ++ L+P+ KE F E S P G D M L P+ S+ +R+ G +
Sbjct: 8 LTIPSNDTKVVDEGPYGWR---GDASVGFGGRGGEGNGYGAVNTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAAD------AAFGRDGG--------NGNGNVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRDSSMLASAPCSRPRSQSMCVKHCLVEVRRGGWCYIEVEQ----GSKVPYPSLHDLVLACSSMEVLYPDVRKEDAFDEPSGGGPWGGGGGDAALSDSMPLYPQPSDVTRLSGPVGV 311
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.670e-58 Identity = 147/317 (46.37%), Postives = 191/317 (60.25%), Query Frame = 1
Query: 46 GAFMDETKALPPMVRLPGAKSLYLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXX------AASIEDPCRLIGANLCM-HPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGR--QLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELGIPSGS-SHAIIMNALENH----EVVKRAEGHPGTLARLAPLLCDHDLSDSHVTK-MATEYRMQFRSDSTQSRRH 951
G +DET+ +PP A S Y+G V +Q VV +L++ T CVTVTGEPGSGKTE+A+QAC YVRERH FD+ +ADC KAA + S+ED CRLIG + M P P + L +F+F +P QKVLLVLD+ D+LFE + +A+DRLV LL+ LC G L+LL TSE LLR FR G+E V VKPL+ + A++LL D PR L+ ELG+ SG S A +++A+ENH EV+K A GHPGTL RLAP+L L+D+ K +AT+ R FR S + R H
Sbjct: 222 GKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETFFVIPNSPNGASGDSVSLEDLCRLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLFE-RDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRGNGY-FRGGSEMVATVKPLKMQHASELLMDNSPRDLQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFRDKSYRQRGH 536
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE) HSP 1 Score: 185 bits (469), Expect = 9.050e-47 Identity = 142/421 (33.73%), Postives = 190/421 (45.13%), Query Frame = 1
Query: 1105 GAPRVLTGSLQHSPSSYRRRISHEEQMVQQELQEPDAPQMTPAQRRAWDTAAERGLRDRGCRLVWVEAITNAAAEHRSK-GGGAPGGEDVVRPDRVPWKNLSKSLEHHLLTLPSTHGQMVDQGPLGWREASGYTGAGMDGRQGLMGGYGSMSSVAPRG--LNSLELNFVKGILRSKQNALRKEKYRHGLGRFGGSEGAVNISGRAELWTRTEARLARGGGLDEQVRVG-DEDEDVISIEAFVRFSDWWAPLMITLSRLRNDWASTNPVRVEGFVGRLEADRKLLTRERGTFLLRFSESRPGALVVSFSEN---------------------------VRQAPSGSGFHAAQFH----RPSLCVQHCLVTVRERGQCTIDVDDVLDGAGPISYAGLHDLVRDCSKLQTLFPNAPKEIVFTET 2262
G P+ SL H RR+S +E EP++ QM ++RAWD A G+ DRGCRL+WV A + A R GGG+ GG R + V W+ L +SL HL T D P+ + P G +++ +L F++GILR Q A+ K ++ G DE VG D +D +S+EAF FS WWAPLM TL +RNDWA+T PVRV GF+ R+ + R L+ RE GTFLLRFSESR GALV+SF++ ++ +P QF R SL V+H LV V+ G+C I + G Y LHD VR +L+ L+P+ PKE F ET
Sbjct: 91 GQPQPPPHSLLHQQLQEYRRVSAQEAPCI----EPESSQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMARGCRQDDGGGSGGGWSSRRGEIVSWECLQESLMEHLREGTKTTRNWDD--PI----------------------------ILPHGRVVDTPQLEFIRGILRRGQEAVAKARW--------------------------------GATGDECTEVGGDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVSRLSRISRCLVPFISCAGRLACCLQGSPINPRIVLQQFQLRSGRRSLSVKHSLVEVKWGGRCCIQAEK----GGMRCYGSLHDFVRQIPELKKLYPDIPKEEAFGET 441
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE) HSP 1 Score: 109 bits (273), Expect = 4.700e-24 Identity = 60/131 (45.80%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 4 GGDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSL--YLGTVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASI------EDPCRLI 372
GG+H++ IF+TLP+G +DET PP R P K++ + G +Q+VV +L+ ACVTVTGE GSGKTE A+QAC YVRERH FD+ +ADC KAA + + + EDPCRL+
Sbjct: 30 GGNHDIRIFETLPEGQLVDETH--PPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADCDKAAFNSCSDKSSGHPFFALQNCLNDSAWEDPCRLV 158
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: A0A1V9Z989_9STRA (SH2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z989_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.710e-13 Identity = 92/303 (30.36%), Postives = 139/303 (45.87%), Query Frame = 1
Query: 7 GDHNVE-IFDTLPDGAFMDETKALPPMVRLPGAKSLYLG-TVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASIEDPCRLIGANLCMHPEPESPEALARFLFTHPTEPERPKPQ--------KVLLVLDSADALFEGKGGEARDRLVEL---LNSLCCYGRQLRLLLTSEQNLLRDTHIRFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELGIPSGS-SHAIIMNALENHEVVKRAEGHPGTLARLAPLLCDHDL 873
GDH +F +P G + D T LP + +++G ++ + V LVE + V +TG PG GKTE+ALQ+C Y +R+ F+ I+F A APT ++ A S G + + + E L + +R + Q K LLVLD +A+F K AR L EL ++ L R L LL+T++ L + G E++ ++ L A DAA L + PR+L+ E+G G S ++M+AL GHP T+ +A LL DL
Sbjct: 213 GDHAASHLFSDIPLGRYQDLTPPLP-LNECDAVAEVFVGRSIEVHAVYTALVEGA-RMVCLTGPPGIGKTEVALQSCQYATDRYLFERIFFLRFTPAKAPTASALRQYVLSRLAKSF-------GVPVDAAVDDDGDEVLTKLC-------DRIRDQLDSLGTAAKYLLVLDGCNAMFPSKA-LARTLLPELRSIISQLLRRVRSLSLLVTNDSRLGGGAGLDCGVG-ERIIPIERLPALDAALLFTVRAPRRLQLHEMGGDLGVFSRGLVMDALG---------GHPRTICAVAQLLELRDL 488
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Match: D8LEZ2_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ2_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 2.030e-13 Identity = 87/292 (29.79%), Postives = 125/292 (42.81%), Query Frame = 1
Query: 7 GDHNVEIFDTLPDGAFMDETKALPPMVRLPGAKSLYLG-TVALQKVVEMLVESSTACVTVTGEPGSGKTEMALQACAYVRERHGFDAIYFADCKKAAAPTYTSXXXXXXXXXAASIEDPCRLIG--ANLCMHPEPESPEALARFLFTHPTEPERPKPQKVLLVLDSADALFEGKGGEARDRLVELLNSLCCYGRQLRLLLTSEQNLLRDTHI---RFRNGTEKVTKVKPLQARDAAQLLSDLMPRKLRYTELG------IPSGSSHAIIMNALENHEVVKRAEGHPGTLARL 846
GDH++ +F+ +PDG F+D T PP R + G V +QKVV+ +V S CVT+TG+ G GKT++ L+ACAY RER+ F I+F +A A + G A + H + +AL R +HP+ ++ LLVLD GE R L LL+ L R + LT+ + + R EK V+PL AR A+L R L E+G A + ++V GHPG + L
Sbjct: 167 GDHDIPVFEEVPDGQFVDATPLKPPY-RCDAVTQYFWGRAVDVQKVVKHMV-SGVPCVTITGQKGIGKTQVLLKACAYTRERNVFGEIFFCRLDRAVGGNDACNWLEQGFQLPAGSLVAHNMDGVVAKISQHVRDQL-QAL-REQGSHPS-------RRALLVLDGCSQPVV-MVGEERFFLSRLLSRLVDVLRTEGVTLTTAVTMRAKGPMAPGRIGIHGEKTVVVEPLDARSTAELFVMCCSRNLSVCEMGPSKPEPFTGTEGKADSYESFAKSDIVLALRGHPGCVQDL 446 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12354.1777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12354.1777.1 >prot_H-elongata_contig12354.1777.1 ID=prot_H-elongata_contig12354.1777.1|Name=mRNA_H-elongata_contig12354.1777.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=804bp MDETKALPPMVRLPGAKSLYLGTVALQKVVEMLVESSTACVTVTGEPGSGback to top mRNA from alignment at H-elongata_contig12354:977..6796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12354.1777.1 ID=mRNA_H-elongata_contig12354.1777.1|Name=mRNA_H-elongata_contig12354.1777.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5820bp|location=Sequence derived from alignment at H-elongata_contig12354:977..6796+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12354:977..6796+ >mRNA_H-elongata_contig12354.1777.1 ID=mRNA_H-elongata_contig12354.1777.1|Name=mRNA_H-elongata_contig12354.1777.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4824bp|location=Sequence derived from alignment at H-elongata_contig12354:977..6796+ (Himanthalia elongata Himel1 dioecious)back to top |