mRNA_H-elongata_contig12326.1760.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: D7FP22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI) HSP 1 Score: 546 bits (1408), Expect = 8.390e-191 Identity = 256/326 (78.53%), Postives = 293/326 (89.88%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWMDAP 978
EDRR+E MI +A KSPPWLA FLR FAPFVT+TF + N VGPV + FY +YK+YKI+PVNVLGM+YGLVMCFFGGFFHVTIAAIE FNMTGG+KV LCV +LK+D++ALH A+KEDDKRDDD+DGIPDV+Q+SPEKLLTRKTALA RVINPDRATNA+TGIWQGYMGVLV+LKFRFAKV+ALAVSIGNN+RP VAKI GP+LAFVIP+EYHQWIAPMINY CKFVAMT+AWWIQR +STVQSAI+GGLLFSRSL+ F+S+ T LKL+ D SF+DE++GWT+AACGAYFQ S NWDLPW VDL LWPAY+LE FL+WSVTWMD P
Sbjct: 62 EDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVRFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVINPDRATNAITGIWQGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLFLWPAYLLETFLKWSVTWMDVP 387
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A835Z0S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA) HSP 1 Score: 334 bits (857), Expect = 4.630e-108 Identity = 159/328 (48.48%), Postives = 228/328 (69.51%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWMDAPPA 984
E R+E ++ DK+PP L + APF+ +VLN VGP + Y ++ +YK +P NV+ M+ GL FFGG F VT AAIE F GG V+ + +LK D + + ANK+DD+ DD+ +GI DV+++ +L++RK L R ++PDR +A+ G+++G+ GVLV+L+FRFA+VIALAVSI ++MRP ++IL P LAF+IPKEYH+WI+ MIN LC+ VA TIAW IQR +ST+QSAI+GGL+F+R+L+ F+ + + + + +++DEI+GW +AA G Y QI NW+LP VDL LWP ++ E L WSVTWMDA P+
Sbjct: 17 EVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPS 344
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A7S1REG4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA) HSP 1 Score: 260 bits (665), Expect = 1.450e-79 Identity = 128/315 (40.63%), Postives = 197/315 (62.54%), Query Frame = 1
Query: 31 SIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWMDA 975
+++ +SPPW A++L AP + V +GP + G + Y+++P V + GL M FFGG + V+IAA E F GG +V++C+++L E A+ A+ D++ D D DG+ DV+Q+ +L+ RK AL + I+P+ A G+W YMGVL +LKF+FA+ IALA SI N+RPA+AK+LGP+L V P +Y +WI+P ++ LCK VA +AW +++ +TVQS GGL+ SR+LL + + + + D++ +DE+VGW V ACG Y Q+ +P + L WP +LE L+W+V W+DA
Sbjct: 3 ALSTQSPPWAAQYLAKAAPAIGVLGAGCELLGPALVRLGGAACEAYRLLPGTVARGLGGLGMSFFGGRYTVSIAAWEAFRSMGGSQVYVCLQDLGEQGRAVWVAHVADEEEDADADGVADVRQLEGGRLVARKAALVMKTIDPETVARAAGGLWTAYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDYRKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQLFRGGPVPAILSPLFWPLDVLERVLQWNVAWVDA 317
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A6T8HJ76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HJ76_HEMAN) HSP 1 Score: 256 bits (654), Expect = 9.440e-78 Identity = 126/327 (38.53%), Postives = 203/327 (62.08%), Query Frame = 1
Query: 1 EDRRLESMIESIADKS--PPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEK-LLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWMD 972
E R+E + ++A++ PPW L P +T ++ PV ++ ++ +P + +YGLV+CFFGG + VT+AA+E F ++GG++V C+R++ D+ + AN D+K+DDD+DG DV Q+S +K LL+RK L R ++PDR AL G+ Q + GVL LK +FA+ +ALAVSI +N+R +L P LA +IP EYH W++P+I+ CK V M +AW + R ++T +++ GGL+ +R+ + + +K+ +DS +DE GWT+ GAYFQ+S + LP+ ++++L P ++E FL W+VTW D
Sbjct: 14 EAARVERICNALAEREGVPPWTKSLLVQLGPLLTTLLAFIDASTPVVMSAIAAAVAIWNTLPKQAITALYGLVLCFFGGHYTVTLAAVEAFRVSGGERVTQCIRDIWTDITNVRIANAADNKKDDDHDGKLDVDQLSSDKALLSRKIGLVLRTVDPDRVIQALGGLAQAFAGVLATLKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYHHWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQLSSGFSLPFPLNVVLLPVSMVEWFLTWAVTWFD 340
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A7S2VT12_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VT12_9DINO) HSP 1 Score: 254 bits (650), Expect = 5.530e-77 Identity = 125/313 (39.94%), Postives = 193/313 (61.66%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILE 939
E RLE + ++D +PPW A +++ AP V + ++ +GP+ FY +Y++Y+ +P N ++GL +CFFGG + +++AA+E F + GGD + + + L++ + +A++EDDK D D DG+ DV+QM +L +RK AL R I+P + A+ G+W GY+GVL LK R+A+ ALA SIG+ +RPA +K+ GPS+ V P +Y W+ P N CK + +TIAW +Q +STVQS + GGL SR+ L+ + SDD+ DE+ GW +AA G Y+Q LP + +LWPA +LE
Sbjct: 46 EAERLEKLTVGLSDAAPPWAAPYIKQAAPAVGLAGAIVEVMGPIVYNFYASLYRVYQTLPTNAASCLWGLALCFFGGRYPLSLAAVEAFKLAGGDSMMMHLVTLRDSAVKVQQASQEDDKHDADGDGVADVRQMGARQLFSRKMALVLRSIDPGVVSEAVGGLWSGYLGVLAALKLRYARTAALAHSIGDAVRPAASKLFGPSVLAVTPPDYRNWVGPAFNLACKVLGLTIAWRLQHAISTVQSGLTGGLQASRAALALMGRA------SDDTMADEVAGWALAATGIYYQFLGG-GLPAVLVPVLWPAGLLE 351
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A813D688_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL) HSP 1 Score: 253 bits (647), Expect = 2.280e-76 Identity = 131/327 (40.06%), Postives = 197/327 (60.24%), Query Frame = 1
Query: 1 EDRRLESMIESIAD-KSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLES-DDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWMDA 975
E RLE + S+A + PPWL +LR P V GP FY +YK+YK +P N ++GL CFFGG + AA E F GGD++ +C+++L+ DL ++ +A +++D+ +S EK ++ AL R ++P R + AL+G+W GYMGV++ LK+ FA+ +A A SIG+N+RP AK+L P+ V P EY QW+ P IN CK VAM +AW +Q+ VS+VQS+I GGLL SR L ++ + L + +D+ +DEI+GW +A+ G YFQI +P + +LWP + E++L+WSVTW+ +
Sbjct: 50 EAARLEHFMVSLATGQEPPWLTPYLRKLGPAFAAANQVAAVAGPFLYQFYAGLYKIYKALPQNAACGLWGLGACFFGGRYAAFFAAAEAFKTAGGDQMLVCLQDLQADLVSVLQAQEDEDEA-----------SLSGEKKASKTLALVMRTVDPGRLSMALSGVWAGYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQIIKGGSVPLLLAPILWPMGVAESWLQWSVTWLGS 365
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A7S2RLK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.590e-71 Identity = 116/321 (36.14%), Postives = 199/321 (61.99%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVT 963
E R +I S ++ +PP +L+ AP ++ + L+ P+ L+ + K ++++P +L V+G ++CFFGG + TIAA+E + GG + + R+L + + + + EDD +D+D DGI DV Q+S ++L RK +A +PD+ A+ GI+ G++GV+ +LK +FAK IAL +IG+ + ++ P L +IP++YH+WI ++ Y+CK +A++IAW++QR +S SAI GGLL SR +L+F++ + +S++DEIVGW++AA G YFQ + +P+ +LLLWP + E ++ W+V+
Sbjct: 64 EAERWTKLISSASESAPPAAVPYLKMMAPVLSAVLVGLHMALPLILSAAAAVDKFFQVVPAQLLVAVFGALICFFGGMYPATIAAMEAWQQAGGRRAYENARDLYIEFKRVMHKSAEDDLKDEDGDGIADVDQISGKELFMRKAHIALTTCDPDKLNGAIQGIYTGWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHRWIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQFMMGFSMPFPFNLLLWPFGVAEWYIVWTVS 384
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A8J2ETN3_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2ETN3_9DINO) HSP 1 Score: 239 bits (610), Expect = 7.530e-71 Identity = 127/324 (39.20%), Postives = 194/324 (59.88%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLK-LESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWM 969
E R+ + + A P ++ L P+ V + P + + +LY +PV + +YGL +CFFGG + V I+AIE F M+GGDK+ C +++ E+ L N+EDD D DNDGI DV Q+S +L+ RK L I+PD+ + A+ G++QG++ VL+ +KF+FA+ +ALAVS+ R A +L P LA +P + WI I+YL K VA+ AW +Q+ V VQSAI GG +F+++LL F+S ++ ++ D++ VDE +GW +AACG YFQ+ H + L + L+L+P I+E LEW VTW+
Sbjct: 44 EKARVAKLALAAAAHPPSYVYDVLEQALPYWNQALEVFAYIIPKIVFVWTKSTELYAALPVEIAMCLYGLALCFFGGTYVVAISAIEAFKMSGGDKISACWKDICEEYAVLRDRNQEDDVEDLDNDGIADVLQISQRELMQRKIKLVVSSIDPDKVSGAVGGLYQGFLSVLMTVKFQFAQSVALAVSMAEKARKPCAVVLTPLLATALPPDSEDWIVAFIDYLTKTVALLFAWTLQKMVCAVQSAIAGGHIFAQNLLYFLSKKLGVENIDLDETMVDEYIGWAIAACGIYFQLIHGFSLSFPFSLILFPLNIVEFALEWVVTWL 367
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A8J1Z0D1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z0D1_9DINO) HSP 1 Score: 231 bits (589), Expect = 1.150e-67 Identity = 122/316 (38.61%), Postives = 192/316 (60.76%), Query Frame = 1
Query: 25 IESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLK-LESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSVTWM 969
+ + +K+ P+ KFL ++ V P + Y Y ++P+ + +YGL +CFFGG + V I+AIE F M+GGD + C ++ E+ L N+ED++ D DNDGI DV Q+S +L+ RK L I+PD+ T A+ G++QG++ VL+ +KF+FA+ IALAVS+ R A +L P LA +P WI I+YL K +A+ AW +Q+ V VQSAI+GG +F+++LL F+++ ++ ++ D++ VDE +GW +AA G YFQI H + L + ++L+P I+E LEW+VTW+
Sbjct: 69 VYDVMEKALPYWNKFLE-----------IMAVVLPNVVWAYEKCRDFYAMLPIEIACCIYGLGICFFGGTYVVAISAIEAFKMSGGDTIEACWNDICEECSLLVEKNEEDNEEDLDNDGIADVLQISQRELMQRKVKLVVTSIDPDKLTKAVGGLYQGFLSVLMTVKFQFAQAIALAVSMAEQARKPAAVVLTPILASALPPNSEDWIVTAIDYLTKTIALLFAWTLQKMVCAVQSAIKGGHMFAQNLLLFLANKLGVENIDLDETMVDEYIGWAIAAMGVYFQIVHGFALVFPFSIVLFPLNIIEFSLEWTVTWL 373
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Match: A0A7S3WUS9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WUS9_9SPIT) HSP 1 Score: 226 bits (575), Expect = 5.370e-66 Identity = 111/320 (34.69%), Postives = 186/320 (58.13%), Query Frame = 1
Query: 1 EDRRLESMIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKIMPVNVLGMVYGLVMCFFGGFFHVTIAAIETFNMTGGDKVWLCVRELKEDLEALHRANKEDDKRDDDNDGIPDVQQMSPEKLLTRKTALAFRVINPDRATNALTGIWQGYMGVLVILKFRFAKVIALAVSIGNNMRPAVAKILGPSLAFVIPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLSFISDTTSLKLESDDSFVDEIVGWTVAACGAYFQISHNWDLPWFVDLLLWPAYILEAFLEWSV 960
E R+ +IE ++ K P ++ +++ AP + ++ P + + +L +P ++ + G +CFFGG F TIAA E + + GG + C ++L + + + AN DDK+D + DG PDVQQM+P++L+ K +A + +NPD ++ + G++ G++GVL ILK +FAK + L IG + AK P + ++P+EY +W+ + + CK A+T+AWW+ R +S SAI GGLLF + L+ ++ + LK +S +DE +GW VA G FQ + + +P+ +L+LWP +LEAF+ WSV
Sbjct: 21 ETLRVTKIIEELSTKVPAKVSPYVKQAAPVLATAWVYFMIALPYIVEGITKVQELVMQLPEKIVYAILGFCVCFFGGIFPATIAAAEAWQLCGGCEAIECCKQLYNEFKKVQDANDADDKKDANKDGKPDVQQMAPKELIVHKAQVALKAVNPDTVSDGIVGLYTGWVGVLAILKIKFAKTVTLGEKIGEQLYEP-AKKFEPMIEGMVPEEYRKWVPVAVRWTCKVSAITVAWWVSRVISAFHSAIRGGLLFGKYLVDYLHERGILKSDSSAQSMDEAIGWGVALAGLLFQFATGFGVPFPFNLVLWPLQLLEAFIVWSV 339 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12326.1760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12326.1760.1 >prot_H-elongata_contig12326.1760.1 ID=prot_H-elongata_contig12326.1760.1|Name=mRNA_H-elongata_contig12326.1760.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp MIESIADKSPPWLAKFLRGFAPFVTVTFIVLNTVGPVFLAFYGFMYKLYKback to top mRNA from alignment at H-elongata_contig12326:1419..7157+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12326.1760.1 ID=mRNA_H-elongata_contig12326.1760.1|Name=mRNA_H-elongata_contig12326.1760.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5739bp|location=Sequence derived from alignment at H-elongata_contig12326:1419..7157+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12326:1419..7157+ >mRNA_H-elongata_contig12326.1760.1 ID=mRNA_H-elongata_contig12326.1760.1|Name=mRNA_H-elongata_contig12326.1760.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig12326:1419..7157+ (Himanthalia elongata Himel1 dioecious)back to top |